Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000995 00000 ------------ - 0.00 0.40 0.30 + 1.00 0.60 0.70 0000 --- --- --- --- 001129 00000 ------------ C 0.93 0.83 0.88 G 0.07 0.17 0.12 0000 --- --- --- --- 001132 00000 ------------ C 0.50 0.67 0.59 T 0.50 0.33 0.41 0000 --- --- --- --- 001155 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001264 00000 ------------ A 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 001352 00000 ------------ - 0.14 0.22 0.19 + 0.86 0.78 0.81 0000 --- --- --- --- 001691 00000 ------------ C 0.53 0.69 0.62 G 0.47 0.31 0.38 0000 --- --- --- --- 001739 00000 ------------ C 0.94 0.54 0.71 T 0.06 0.46 0.29 0000 --- --- --- --- 001743 00000 ------------ G 0.81 0.80 0.81 A 0.19 0.20 0.19 0000 --- --- --- --- 001762 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 001863 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 001899 00026 5' UTR - 0.00 0.48 0.27 + 1.00 0.52 0.73 0000 --- --- --- --- 002434 00000 ------------ C 0.33 1.00 0.86 A 0.67 0.00 0.14 0000 --- --- --- --- 002464 00000 ------------ G 0.33 1.00 0.86 A 0.67 0.00 0.14 0000 --- --- --- --- 002477 00000 ------------ - 0.40 0.79 0.71 + 0.60 0.21 0.29 0000 --- --- --- --- 002511 00000 ------------ C 0.40 0.78 0.70 T 0.60 0.22 0.30 0000 --- --- --- --- 002625 00000 ------------ C 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 002637 00000 ------------ C 0.60 0.87 0.81 G 0.40 0.13 0.19 0000 --- --- --- --- 003520 00000 ------------ G 0.89 0.84 0.87 C 0.11 0.16 0.13 0000 --- --- --- --- 003681 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003846 00000 ------------ A 0.71 0.43 0.58 G 0.29 0.57 0.42 0000 --- --- --- --- 004223 00000 ------------ C 0.85 0.38 0.56 T 0.15 0.62 0.44 0000 --- --- --- --- 004303 00000 ------------ T 0.95 0.59 0.72 G 0.05 0.41 0.28 0000 --- --- --- --- 004311 00000 ------------ - 0.50 0.65 0.57 + 0.50 0.35 0.43 0000 --- --- --- --- 004432 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 004483 00000 ------------ C 0.48 0.86 0.66 T 0.52 0.14 0.34 0000 --- --- --- --- 004642 00000 ------------ T 0.67 0.86 0.76 C 0.33 0.14 0.24 0000 --- --- --- --- 004734 00000 ------------ C 0.81 0.32 0.58 G 0.19 0.68 0.42 0000 --- --- --- --- 004754 00000 ------------ T 0.83 0.36 0.61 G 0.17 0.64 0.39 0000 --- --- --- --- 004981 00000 ------------ G 0.85 0.36 0.62 T 0.15 0.64 0.38 0000 --- --- --- --- 004999 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005101 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 005240 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 005339 00000 ------------ C 0.85 0.84 0.85 T 0.15 0.16 0.15 0000 --- --- --- --- 005340 00000 ------------ G 0.81 0.34 0.59 A 0.19 0.66 0.41 0000 --- --- --- --- 005367 00000 ------------ T 0.85 0.84 0.85 C 0.15 0.16 0.15 0000 --- --- --- --- 005770 00000 ------------ A 0.96 0.57 0.77 C 0.04 0.43 0.23 0000 --- --- --- --- 005813 00000 ------------ G 0.80 0.80 0.80 A 0.20 0.20 0.20 0000 --- --- --- --- 005828 00000 ------------ C 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 005843 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 005956 00000 ------------ T 0.54 0.80 0.67 G 0.46 0.20 0.33 0000 --- --- --- --- 006042 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 006100 00000 ------------ T 1.00 0.55 0.78 C 0.00 0.45 0.22 0000 --- --- --- --- 006113 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006163 00000 ------------ T 0.88 0.84 0.86 C 0.12 0.16 0.14 0000 --- --- --- --- 006299 00000 ------------ A 0.50 0.79 0.63 G 0.50 0.21 0.37 0000 --- --- --- --- 007338 00000 ------------ A 1.00 0.57 0.80 G 0.00 0.43 0.20 0000 --- --- --- --- 010379 00000 ------------ C 1.00 0.92 0.96 T 0.00 0.08 0.04 0000 --- --- --- --- 010634 00000 ------------ G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 011085 00000 ------------ G 0.63 0.76 0.70 C 0.37 0.24 0.30 0000 --- --- --- --- 011088 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017738 00000 ------------ C 0.89 0.98 0.93 A 0.11 0.02 0.07 0000 --- --- --- --- 017830 00000 ------------ A 0.67 0.74 0.70 G 0.33 0.26 0.30 0000 --- --- --- --- 018399 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018415 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 018458 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018472 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018477 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018536 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018641 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018817 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 018832 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018854 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018962 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 020273 00000 ------------ A 0.70 0.50 0.60 G 0.30 0.50 0.40 0000 --- --- --- --- 020307 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020409 00000 ------------ G 0.32 0.93 0.62 A 0.68 0.07 0.38 0000 --- --- --- --- 020412 00000 ------------ A 0.91 0.55 0.73 G 0.09 0.45 0.27 0000 --- --- --- --- 020774 00000 ------------ G 0.76 0.98 0.87 A 0.24 0.02 0.13 0000 --- --- --- --- 020843 00000 ------------ A 0.78 0.98 0.88 C 0.22 0.02 0.12 0000 --- --- --- --- 020845 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020877 00000 ------------ A 0.80 0.98 0.89 G 0.20 0.02 0.11 0000 --- --- --- --- 021223 00000 ------------ A 0.74 0.58 0.66 G 0.26 0.42 0.34 0000 --- --- --- --- 021236 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 021260 00000 ------------ T 0.55 0.53 0.54 C 0.45 0.47 0.46 0000 --- --- --- --- 021489 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 021778 00000 ------------ C 0.81 0.74 0.77 G 0.19 0.26 0.23 0000 --- --- --- --- 022732 00000 ------------ G 0.87 0.63 0.75 A 0.13 0.37 0.25 0000 --- --- --- --- 022761 00000 ------------ T 0.79 0.61 0.70 A 0.21 0.39 0.30 0000 --- --- --- --- 022775 00000 ------------ G 0.58 0.66 0.62 A 0.42 0.34 0.38 0000 --- --- --- --- 022846 00000 ------------ G 0.89 0.64 0.77 A 0.11 0.36 0.23 0000 --- --- --- --- 022879 00000 ------------ G 1.00 0.92 0.96 A 0.00 0.08 0.04 0000 --- --- --- --- 023037 00000 ------------ C 1.00 0.88 0.94 G 0.00 0.12 0.06 0000 --- --- --- --- 023822 00000 ------------ - 0.17 0.09 0.13 + 0.83 0.91 0.87 0000 --- --- --- --- 023829 00000 ------------ C 0.95 0.95 0.95 T 0.05 0.05 0.05 0000 --- --- --- --- 023842 00000 ------------ A 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 023849 00000 ------------ T 0.55 0.76 0.65 C 0.45 0.24 0.35 0000 --- --- --- --- 023897 00000 ------------ T 1.00 0.64 0.83 C 0.00 0.36 0.17 0000 --- --- --- --- 024689 00000 ------------ A 0.92 0.91 0.91 G 0.08 0.09 0.09 0000 --- --- --- --- 024743 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024747 00000 ------------ G 1.00 0.65 0.83 A 0.00 0.35 0.17 0000 --- --- --- --- 024860 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 027207 00136 5' UTR - 0.88 0.93 0.90 + 0.12 0.07 0.10 0000 --- --- --- --- 027421 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 027434 00000 ------------ C 0.98 0.62 0.82 T 0.02 0.38 0.18 0000 --- --- --- --- 027556 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 027579 00000 ------------ - 0.00 0.38 0.18 + 1.00 0.62 0.82 0000 --- --- --- --- 027598 00000 ------------ G 0.52 0.66 0.59 A 0.48 0.34 0.41 0000 --- --- --- --- 027957 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028043 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028063 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 028097 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028243 00000 ------------ T 0.72 0.89 0.80 A 0.28 0.11 0.20 0000 --- --- --- --- 028501 00000 ------------ A 0.87 0.91 0.89 T 0.13 0.09 0.11 0000 --- --- --- --- 028528 00000 ------------ G 0.98 0.57 0.78 T 0.02 0.43 0.22 0000 --- --- --- --- 028546 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028928 00362 NON-SYN A 0.50 0.65 0.58 G 0.50 0.35 0.42 0037 ATG GTG MET(M) VAL(V) 029119 00553 SYNON G 0.91 0.98 0.95 C 0.09 0.02 0.05 0100 TCG TCC SER(S) SER(S) 029260 00694 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0147 CGG CGA ARG(R) ARG(R) 029307 00741 NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 0163 CAG CGG GLN(Q) ARG(R) 029488 00922 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0223 TTC TTT PHE(F) PHE(F) 029722 01156 SYNON G 0.96 0.57 0.77 C 0.04 0.43 0.23 0301 CCG CCC PRO(P) PRO(P) 029806 01240 SYNON G 0.52 0.61 0.57 A 0.48 0.39 0.43 0329 ACG ACA THR(T) THR(T) 030178 01612 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030228 01662 3' UTR G 1.00 0.74 0.87 A 0.00 0.26 0.13 0000 --- --- --- --- 030271 01705 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 030277 01711 3' UTR A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 030314 01748 3' UTR C 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 030342 01776 3' UTR G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 030364 01798 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 030374 01808 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030408 01842 3' UTR - 1.00 0.74 0.87 + 0.00 0.26 0.13 0000 --- --- --- --- 030517 01951 3' UTR G 0.54 0.67 0.61 A 0.46 0.33 0.39 0000 --- --- --- --- 030603 02037 3' UTR A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 030700 00000 ------------ C 0.52 0.67 0.60 T 0.48 0.33 0.40 0000 --- --- --- --- 030768 00000 ------------ G 0.74 0.89 0.82 A 0.26 0.11 0.18 0000 --- --- --- --- 030776 00000 ------------ C 0.93 0.98 0.96 T 0.07 0.02 0.04 0000 --- --- --- --- 030924 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030925 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030997 00000 ------------ G 0.52 0.65 0.59 A 0.48 0.35 0.41 0000 --- --- --- --- 031065 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 031134 00000 ------------ C 0.94 0.67 0.81 T 0.06 0.33 0.19 0000 --- --- --- --- 031158 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 031753 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031763 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031785 00000 ------------ C 0.96 0.55 0.76 T 0.04 0.45 0.24 0000 --- --- --- --- 031882 00000 ------------ G 0.95 0.55 0.75 A 0.05 0.45 0.25 0000 --- --- --- --- 032328 00000 ------------ T 0.95 0.55 0.76 C 0.05 0.45 0.24 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000995: TGGGG 001352: C 001863: GGCCGCCGCGCC 001899: GGGCCCCGCTGTCCGCCGCCCGCCG 002477: CTCAGAAGCGGGAAGGGCGAGGATTTGGACCTG 004311: C 023822: GACGTT 027207: C 027556: TT 027579: CT 030408: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000023 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000316 00000 ------------ C 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 000356 00000 ------------ T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 000466 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 000497 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000529 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000674 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002420 00000 ------------ A 0.75 1.00 0.88 C 0.25 0.00 0.12 0000 --- --- --- --- 009839 00000 ------------ G 0.60 1.00 0.77 A 0.40 0.00 0.23 0000 --- --- --- --- 010104 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 010213 00000 ------------ T 0.48 1.00 0.74 C 0.52 0.00 0.26 0000 --- --- --- --- 010991 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 011251 00066 5' UTR C 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 011739 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012171 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 012304 00229 5' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012381 00306 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012399 00324 5' UTR C 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 012466 00391 5' UTR G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 012606 00531 5' UTR C 0.82 1.00 0.93 G 0.18 0.00 0.07 0000 --- --- --- --- 012618 00000 ------------ T 0.82 1.00 0.93 A 0.18 0.00 0.07 0000 --- --- --- --- 012766 00000 ------------ G 0.85 1.00 0.94 A 0.15 0.00 0.06 0000 --- --- --- --- 012930 00000 ------------ - 0.82 1.00 0.91 + 0.18 0.00 0.09 0000 --- --- --- --- 013011 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 013519 00000 ------------ T 0.78 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 013555 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 013714 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 013849 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 014076 00000 ------------ A 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 014082 00000 ------------ C 0.46 1.00 0.72 T 0.54 0.00 0.28 0000 --- --- --- --- 014138 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 014319 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014357 00000 ------------ G 0.75 0.98 0.86 A 0.25 0.02 0.14 0000 --- --- --- --- 014700 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015102 00000 ------------ A 0.46 1.00 0.72 G 0.54 0.00 0.28 0000 --- --- --- --- 015539 00000 ------------ A 0.71 0.97 0.83 C 0.29 0.03 0.17 0000 --- --- --- --- 015957 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 016032 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 016166 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016167 00000 ------------ C 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 016209 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 016301 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 016451 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016514 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016629 00977 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0140 AAC CAC ASN(N) HIS(H) 016700 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 016777 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 016858 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017136 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 017277 00000 ------------ T 0.43 1.00 0.72 G 0.57 0.00 0.28 0000 --- --- --- --- 017579 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018737 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018880 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 018909 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 019035 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 019108 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019559 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021112 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021213 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021289 01240 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0227 GCC GCT ALA(A) ALA(A) 021445 01396 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0279 GCC GCT ALA(A) ALA(A) 022269 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022476 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023185 00000 ------------ G 0.75 0.83 0.79 A 0.25 0.17 0.21 0000 --- --- --- --- 023554 00000 ------------ C 0.79 0.85 0.82 A 0.21 0.15 0.18 0000 --- --- --- --- 023618 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 023639 00000 ------------ C 0.92 0.93 0.93 T 0.08 0.07 0.07 0000 --- --- --- --- 023727 01618 SYNON C 0.93 0.93 0.93 T 0.07 0.07 0.07 0353 TTC TTT PHE(F) PHE(F) 023837 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023849 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023873 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024314 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 024320 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024322 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 031176 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 031295 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 031836 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031903 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 032303 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 032750 00000 ------------ G 1.00 0.75 0.88 A 0.00 0.25 0.12 0000 --- --- --- --- 033844 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037251 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 040404 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 040470 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 040537 00000 ------------ G 0.83 0.78 0.80 A 0.17 0.22 0.20 0000 --- --- --- --- 041303 00000 ------------ C 0.98 0.65 0.82 A 0.02 0.35 0.18 0000 --- --- --- --- 041357 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 041420 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 041692 00000 ------------ A 0.77 0.39 0.59 G 0.23 0.61 0.41 0000 --- --- --- --- 041796 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 041862 00000 ------------ - 0.33 0.67 0.50 + 0.67 0.33 0.50 0000 --- --- --- --- 042535 02314 SYNON C 0.94 0.78 0.86 G 0.06 0.22 0.14 0585 CCC CCG PRO(P) PRO(P) 042746 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042834 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042855 00000 ------------ G 0.65 0.59 0.62 C 0.35 0.41 0.38 0000 --- --- --- --- 042871 00000 ------------ - 0.04 0.39 0.21 + 0.96 0.61 0.79 0000 --- --- --- --- 043124 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 044024 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 045354 02855 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0766 CCG TCG PRO(P) SER(S) 045398 02899 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0780 CAC CAT HIS(H) HIS(H) 045586 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 045675 00000 ------------ A 0.96 0.61 0.79 G 0.04 0.39 0.21 0000 --- --- --- --- 046524 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 048297 00000 ------------ A 0.96 0.61 0.78 G 0.04 0.39 0.22 0000 --- --- --- --- 048330 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 048750 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 049374 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 050080 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 051350 00000 ------------ A 0.94 0.78 0.86 G 0.06 0.22 0.14 0000 --- --- --- --- 051435 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 051669 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 053071 00000 ------------ C 0.59 0.64 0.61 T 0.41 0.36 0.39 0000 --- --- --- --- 054006 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 054040 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 054670 00000 ------------ A 1.00 0.57 0.80 G 0.00 0.43 0.20 0000 --- --- --- --- 054771 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 055162 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 055338 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 055927 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 056040 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 056355 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 056510 00000 ------------ A 0.40 0.76 0.57 T 0.60 0.24 0.43 0000 --- --- --- --- 056901 00000 ------------ G 1.00 0.61 0.81 T 0.00 0.39 0.19 0000 --- --- --- --- 058237 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 059634 04675 SYNON C 0.59 0.98 0.78 T 0.41 0.02 0.22 1372 AGC AGT SER(S) SER(S) 062175 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 062274 00000 ------------ T 0.55 0.82 0.68 C 0.45 0.18 0.32 0000 --- --- --- --- 063723 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 063788 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 063843 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 063945 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 064097 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 064397 05682 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 065145 06430 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065204 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065893 00000 ------------ G 0.71 1.00 0.84 T 0.29 0.00 0.16 0000 --- --- --- --- 065954 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 066022 00000 ------------ T 1.00 0.71 0.87 C 0.00 0.29 0.13 0000 --- --- --- --- 066761 00000 ------------ C 0.41 0.64 0.52 T 0.59 0.36 0.48 0000 --- --- --- --- 066773 00000 ------------ C 0.75 1.00 0.88 T 0.25 0.00 0.12 0000 --- --- --- --- 066881 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 066913 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 012930: T 015957: CCTTGCT 041862: ACCCCCAGGGACCCCTGCCCTCCTCACCGCCTCTGTCCGTGAATGCAGGGGG 042871: TGCATCTCCCCAGCTACGTCAAGGAGAGGTTCCTCTTACCAGAAACTCGCTGGCCGTGGTCGGCCTCCCGCCAGGAGCCCTGCATCTCCCCAGCTACGTCAAGGAGAGGTTCCTCTCACCAGAACCTTGCTGGCCGTGGTCGGCCTCCCGCCAGGAGCCCTGCATCTCCCCAGCTACGTCAAGGAGAGGTTCCTCTCACCAGAACCTCGCTGGCCAGGGTCGGCCTCCCGCCAGGAGCCCTGCATCTCCC 046524: T 055927: TGG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000539 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000568 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000739 00000 ------------ G 0.46 0.91 0.68 A 0.54 0.09 0.32 0000 --- --- --- --- 000790 00000 ------------ A 0.65 0.91 0.78 G 0.35 0.09 0.22 0000 --- --- --- --- 000857 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001059 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001150 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001199 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 001577 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001660 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001720 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001831 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002121 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002268 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 002405 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002665 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003125 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003320 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003581 00000 ------------ T 1.00 0.63 0.82 C 0.00 0.37 0.18 0000 --- --- --- --- 003978 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004070 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004507 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 004566 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004605 00000 ------------ - 0.92 0.98 0.95 + 0.08 0.02 0.05 0000 --- --- --- --- 004606 00000 ------------ A 0.81 0.98 0.89 T 0.19 0.02 0.11 0000 --- --- --- --- 005183 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005197 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005272 00000 ------------ T 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 005514 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005597 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005608 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005643 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005746 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006026 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006281 00000 ------------ G 1.00 0.63 0.82 A 0.00 0.37 0.18 0000 --- --- --- --- 006305 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 006410 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 007702 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007734 00000 ------------ A 1.00 0.61 0.81 G 0.00 0.39 0.19 0000 --- --- --- --- 007864 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 008026 00189 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0027 AAG AAA LYS(K) LYS(K) 008592 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008670 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008842 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009441 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 009686 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009689 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009815 00000 ------------ G 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 010697 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 010725 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010841 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011169 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011467 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011661 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011925 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012992 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013069 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013268 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 013777 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 013808 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014111 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 014674 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 014857 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 015323 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015787 00834 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0242 GAG GAA GLU(E) GLU(E) 016095 00000 ------------ T 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 016193 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 016644 00000 ------------ A 1.00 0.63 0.80 T 0.00 0.37 0.20 0000 --- --- --- --- 016744 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016995 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017049 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017077 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017481 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018418 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 018769 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 019223 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 019701 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 020328 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 020485 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020962 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021231 00000 ------------ - 0.00 0.38 0.17 + 1.00 0.62 0.83 0000 --- --- --- --- 021820 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 022115 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022248 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022262 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022596 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022696 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022758 00000 ------------ C 1.00 0.65 0.83 T 0.00 0.35 0.17 0000 --- --- --- --- 023239 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023313 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 023805 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023890 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 024059 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024072 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 024093 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 024827 00000 ------------ G 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 025568 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026775 01509 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0467 CTA CTG LEU(L) LEU(L) 026799 01533 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0475 TGC TGT CYS(C) CYS(C) 026907 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026926 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 028141 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028150 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 028316 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028520 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 029010 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 029391 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 029953 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030316 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030505 00000 ------------ G 0.90 0.86 0.88 A 0.10 0.14 0.12 0000 --- --- --- --- 030936 00000 ------------ T 1.00 0.61 0.80 C 0.00 0.39 0.20 0000 --- --- --- --- 030965 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 030991 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 031200 02001 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031703 02504 3' UTR G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 032165 02966 3' UTR C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 032304 03105 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032742 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 032885 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 033021 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033556 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 033890 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 034097 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 034440 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 034502 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002268: AACCTGCTGGAGAGG 004605: A 013268: GT 021231: GCAGTATTACTGTAGT 021820: TT 023313: TATA 024072: T 026926: GTAT 032742: A 033556: AATA 034097: TGAT 034440: TG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000164 00000 ------------ - 0.13 0.23 0.18 + 0.87 0.77 0.82 0000 --- --- --- --- 000322 00000 ------------ G 0.85 0.77 0.82 A 0.15 0.23 0.18 0000 --- --- --- --- 000450 00000 ------------ G 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 000497 00000 ------------ G 0.61 0.84 0.72 A 0.39 0.16 0.28 0000 --- --- --- --- 000690 00000 ------------ G 0.88 0.77 0.83 A 0.12 0.23 0.17 0000 --- --- --- --- 000974 00000 ------------ C 0.88 0.82 0.85 G 0.12 0.18 0.15 0000 --- --- --- --- 001035 00000 ------------ C 0.46 0.68 0.56 T 0.54 0.32 0.44 0000 --- --- --- --- 001244 00000 ------------ A 0.90 0.89 0.90 G 0.10 0.11 0.10 0000 --- --- --- --- 001435 00000 ------------ - 0.08 0.03 0.05 + 0.92 0.97 0.95 0000 --- --- --- --- 001605 00000 ------------ G 0.86 0.79 0.82 T 0.14 0.21 0.18 0000 --- --- --- --- 001852 00000 ------------ C 0.85 0.79 0.82 T 0.15 0.21 0.18 0000 --- --- --- --- 002054 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 002494 00000 ------------ G 0.97 0.95 0.96 A 0.03 0.05 0.04 0000 --- --- --- --- 002566 00000 ------------ C 0.60 0.57 0.59 T 0.40 0.43 0.41 0000 --- --- --- --- 002584 00000 ------------ A 0.60 0.57 0.59 G 0.40 0.43 0.41 0000 --- --- --- --- 002647 00000 ------------ C 0.82 0.81 0.82 T 0.17 0.19 0.18 0000 --- --- --- --- 002671 00000 ------------ C 1.00 0.88 0.94 T 0.00 0.12 0.06 0000 --- --- --- --- 002733 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 003168 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003220 00000 ------------ C 0.89 0.85 0.87 T 0.11 0.15 0.13 0000 --- --- --- --- 003248 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 003328 00000 ------------ C 0.61 0.50 0.56 T 0.39 0.50 0.44 0000 --- --- --- --- 003338 00000 ------------ - 0.93 0.84 0.89 + 0.07 0.16 0.11 0000 --- --- --- --- 003340 00000 ------------ - 0.05 0.15 0.10 + 0.95 0.85 0.90 0000 --- --- --- --- 003470 00000 ------------ C 0.61 0.52 0.57 T 0.39 0.48 0.43 0000 --- --- --- --- 003551 00000 ------------ A 0.50 0.70 0.60 G 0.50 0.30 0.40 0000 --- --- --- --- 003652 00000 ------------ C 0.89 0.84 0.87 T 0.11 0.16 0.13 0000 --- --- --- --- 003822 00000 ------------ A 0.53 0.74 0.63 G 0.47 0.26 0.37 0000 --- --- --- --- 003899 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 003901 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 003953 00000 ------------ A 0.55 0.75 0.64 T 0.45 0.25 0.36 0000 --- --- --- --- 003955 00000 ------------ - 0.48 0.33 0.40 + 0.52 0.67 0.60 0000 --- --- --- --- 004403 00000 ------------ G 0.63 0.55 0.59 C 0.37 0.45 0.41 0000 --- --- --- --- 004404 00000 ------------ G 0.63 0.55 0.59 A 0.37 0.45 0.41 0000 --- --- --- --- 004642 00000 ------------ C 0.68 0.62 0.65 T 0.33 0.38 0.35 0000 --- --- --- --- 004683 00000 ------------ G 0.68 0.62 0.65 C 0.33 0.38 0.35 0000 --- --- --- --- 004820 00000 ------------ A 0.68 0.58 0.63 G 0.33 0.42 0.37 0000 --- --- --- --- 005016 00000 ------------ G 0.59 0.52 0.56 A 0.41 0.48 0.44 0000 --- --- --- --- 005051 00000 ------------ C 0.57 0.52 0.54 T 0.43 0.48 0.46 0000 --- --- --- --- 005228 00000 ------------ C 0.60 0.52 0.56 A 0.40 0.48 0.44 0000 --- --- --- --- 005296 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 005349 00000 ------------ A 0.64 0.54 0.59 G 0.36 0.46 0.41 0000 --- --- --- --- 005417 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 005499 00000 ------------ C 0.63 0.54 0.59 T 0.37 0.46 0.41 0000 --- --- --- --- 005757 00000 ------------ C 0.85 0.54 0.70 T 0.15 0.46 0.30 0000 --- --- --- --- 005892 00000 ------------ G 0.44 0.70 0.56 A 0.56 0.30 0.44 0000 --- --- --- --- 006040 00000 ------------ G 0.83 0.55 0.70 A 0.17 0.45 0.30 0000 --- --- --- --- 006132 00000 ------------ C 0.75 0.75 0.75 A 0.25 0.25 0.25 0000 --- --- --- --- 006312 00000 ------------ G 0.74 0.75 0.74 A 0.26 0.25 0.26 0000 --- --- --- --- 007565 00000 ------------ T 0.44 0.72 0.57 A 0.56 0.28 0.43 0000 --- --- --- --- 007578 00000 ------------ T 0.44 0.72 0.57 C 0.56 0.28 0.43 0000 --- --- --- --- 007809 00000 ------------ G 0.43 0.72 0.58 A 0.57 0.28 0.42 0000 --- --- --- --- 007931 00000 ------------ G 0.45 0.70 0.58 A 0.55 0.30 0.42 0000 --- --- --- --- 007994 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 008055 00000 ------------ C 0.39 0.70 0.56 T 0.61 0.30 0.44 0000 --- --- --- --- 008080 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008089 00000 ------------ C 0.39 0.70 0.56 T 0.61 0.30 0.44 0000 --- --- --- --- 008176 00000 ------------ G 0.39 0.70 0.56 A 0.61 0.30 0.44 0000 --- --- --- --- 008360 00000 ------------ C 0.84 0.76 0.80 A 0.16 0.24 0.20 0000 --- --- --- --- 008409 00000 ------------ T 0.82 1.00 0.92 C 0.18 0.00 0.08 0000 --- --- --- --- 008423 00000 ------------ C 0.84 0.54 0.68 T 0.16 0.46 0.32 0000 --- --- --- --- 008515 00000 ------------ T 0.76 0.76 0.76 C 0.24 0.24 0.24 0000 --- --- --- --- 008595 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 008622 00000 ------------ A 0.44 0.70 0.56 G 0.56 0.30 0.44 0000 --- --- --- --- 008740 00000 ------------ C 0.44 0.70 0.56 T 0.56 0.30 0.44 0000 --- --- --- --- 008741 00000 ------------ A 0.44 0.70 0.56 G 0.56 0.30 0.44 0000 --- --- --- --- 008752 00000 ------------ T 0.44 0.70 0.56 C 0.56 0.30 0.44 0000 --- --- --- --- 008765 00000 ------------ A 0.44 0.70 0.56 T 0.56 0.30 0.44 0000 --- --- --- --- 008939 00000 ------------ T 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 008990 00000 ------------ T 0.83 0.54 0.69 A 0.17 0.46 0.31 0000 --- --- --- --- 009607 00000 ------------ T 0.44 0.74 0.58 C 0.56 0.26 0.42 0000 --- --- --- --- 009677 00000 ------------ G 0.44 0.74 0.58 A 0.56 0.26 0.42 0000 --- --- --- --- 009837 00000 ------------ C 0.43 0.71 0.57 T 0.57 0.29 0.43 0000 --- --- --- --- 010049 00000 ------------ T 0.44 0.70 0.56 A 0.56 0.30 0.44 0000 --- --- --- --- 010585 00000 ------------ T 0.88 0.82 0.85 G 0.12 0.18 0.15 0000 --- --- --- --- 010693 00000 ------------ C 0.48 0.68 0.57 T 0.52 0.33 0.43 0000 --- --- --- --- 010735 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 010831 00000 ------------ A 0.48 0.68 0.57 C 0.52 0.33 0.43 0000 --- --- --- --- 010845 00000 ------------ T 0.45 0.68 0.56 G 0.55 0.33 0.44 0000 --- --- --- --- 010863 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 011048 00000 ------------ G 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 011178 00000 ------------ G 0.90 0.85 0.87 A 0.10 0.15 0.13 0000 --- --- --- --- 011356 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011863 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011912 00000 ------------ A 0.73 0.75 0.74 G 0.27 0.25 0.26 0000 --- --- --- --- 012470 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012534 00000 ------------ G 0.77 0.74 0.76 A 0.23 0.26 0.24 0000 --- --- --- --- 012585 00000 ------------ A 0.70 0.74 0.72 G 0.30 0.26 0.28 0000 --- --- --- --- 012879 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 013096 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 013136 00000 ------------ - 0.11 0.30 0.21 + 0.89 0.70 0.79 0000 --- --- --- --- 013297 00000 ------------ A 0.85 0.54 0.70 G 0.15 0.46 0.30 0000 --- --- --- --- 013357 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013434 00000 ------------ G 0.72 0.76 0.74 A 0.28 0.24 0.26 0000 --- --- --- --- 013754 00000 ------------ G 0.85 0.54 0.70 A 0.15 0.46 0.30 0000 --- --- --- --- 013786 00000 ------------ G 0.44 0.68 0.55 T 0.56 0.32 0.45 0000 --- --- --- --- 014041 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014177 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 014274 00000 ------------ - 0.09 0.17 0.12 + 0.91 0.83 0.88 0000 --- --- --- --- 014275 00000 ------------ A 0.87 0.59 0.74 G 0.13 0.41 0.26 0000 --- --- --- --- 014393 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 014468 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014567 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014700 00000 ------------ - 0.82 0.54 0.67 + 0.17 0.46 0.33 0000 --- --- --- --- 014735 00000 ------------ T 0.81 0.52 0.67 C 0.19 0.48 0.33 0000 --- --- --- --- 014823 00000 ------------ G 0.81 0.52 0.67 A 0.19 0.48 0.33 0000 --- --- --- --- 014927 00000 ------------ A 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 015115 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 015195 00000 ------------ A 0.62 0.81 0.72 C 0.38 0.19 0.28 0000 --- --- --- --- 015395 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 015406 00000 ------------ A 0.95 0.77 0.86 G 0.05 0.23 0.14 0000 --- --- --- --- 015628 00000 ------------ - 0.88 1.00 0.94 + 0.12 0.00 0.06 0000 --- --- --- --- 015913 00000 ------------ C 0.83 0.57 0.70 T 0.17 0.43 0.30 0000 --- --- --- --- 015920 00000 ------------ C 0.83 0.57 0.70 G 0.17 0.43 0.30 0000 --- --- --- --- 015947 00000 ------------ C 0.43 0.69 0.56 T 0.57 0.31 0.44 0000 --- --- --- --- 015988 00000 ------------ T 0.41 0.68 0.54 C 0.59 0.32 0.46 0000 --- --- --- --- 016090 00000 ------------ C 0.85 0.57 0.71 A 0.15 0.43 0.29 0000 --- --- --- --- 016280 00103 NON-SYN G 0.93 1.00 0.97 A 0.07 0.00 0.03 0035 GGG AGG GLY(G) ARG(R) 016283 00106 NON-SYN G 0.74 0.75 0.74 T 0.26 0.25 0.26 0036 GTC TTC VAL(V) PHE(F) 016373 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016460 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016531 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016537 00000 ------------ C 0.81 0.76 0.79 T 0.19 0.24 0.21 0000 --- --- --- --- 016709 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016731 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016811 00000 ------------ C 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 016857 00000 ------------ A 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 016907 00000 ------------ C 0.83 0.54 0.69 T 0.17 0.46 0.31 0000 --- --- --- --- 017190 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 017301 00000 ------------ T 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 017395 00000 ------------ A 0.74 0.76 0.75 G 0.26 0.24 0.25 0000 --- --- --- --- 017502 00000 ------------ C 0.95 0.84 0.90 T 0.05 0.16 0.10 0000 --- --- --- --- 017548 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 017576 00000 ------------ C 0.74 0.79 0.76 T 0.26 0.21 0.24 0000 --- --- --- --- 017610 00000 ------------ T 0.74 0.75 0.74 C 0.26 0.25 0.26 0000 --- --- --- --- 017689 00000 ------------ C 0.73 0.76 0.74 T 0.27 0.24 0.26 0000 --- --- --- --- 017816 00188 NON-SYN G 0.75 0.76 0.76 A 0.25 0.24 0.24 0063 CGC CAC ARG(R) HIS(H) 017817 00189 SYNON C 0.81 0.76 0.79 T 0.19 0.24 0.21 0063 CGC CGT ARG(R) ARG(R) 017833 EXON7 +2 SPLICE - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 017859 00000 ------------ G 0.73 0.76 0.74 C 0.27 0.24 0.26 0000 --- --- --- --- 017904 00000 ------------ - 0.75 0.77 0.76 + 0.25 0.23 0.24 0000 --- --- --- --- 017946 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 017958 00000 ------------ C 0.75 0.77 0.76 T 0.25 0.23 0.24 0000 --- --- --- --- 018007 00000 ------------ G 0.75 0.77 0.76 A 0.25 0.23 0.24 0000 --- --- --- --- 018059 00000 ------------ A 0.73 0.77 0.75 G 0.27 0.23 0.25 0000 --- --- --- --- 018060 00000 ------------ A 0.73 0.77 0.75 C 0.27 0.23 0.25 0000 --- --- --- --- 018071 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018190 00000 ------------ T 0.75 0.77 0.76 G 0.25 0.23 0.24 0000 --- --- --- --- 018517 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 018582 00000 ------------ T 0.73 0.74 0.73 G 0.27 0.26 0.27 0000 --- --- --- --- 019020 00000 ------------ C 0.81 0.76 0.79 T 0.19 0.24 0.21 0000 --- --- --- --- 019311 00000 ------------ G 0.74 0.76 0.75 A 0.26 0.24 0.25 0000 --- --- --- --- 019340 00000 ------------ T 0.74 0.76 0.75 C 0.26 0.24 0.25 0000 --- --- --- --- 019355 00000 ------------ T 0.74 0.76 0.75 G 0.26 0.24 0.25 0000 --- --- --- --- 019467 00000 ------------ - 0.74 0.76 0.75 + 0.26 0.24 0.25 0000 --- --- --- --- 019523 00000 ------------ T 0.83 0.56 0.69 C 0.17 0.44 0.31 0000 --- --- --- --- 019548 00220 NON-SYN C 0.88 0.86 0.87 T 0.12 0.14 0.13 0074 CCA TCA PRO(P) SER(S) 019670 00000 ------------ - 0.80 0.70 0.75 + 0.20 0.30 0.25 0000 --- --- --- --- 019876 00000 ------------ C 0.76 0.70 0.73 T 0.24 0.30 0.27 0000 --- --- --- --- 019906 00000 ------------ G 0.90 0.57 0.74 A 0.10 0.42 0.26 0000 --- --- --- --- 019989 00000 ------------ C 0.72 1.00 0.86 A 0.28 0.00 0.14 0000 --- --- --- --- 020020 00000 ------------ C 0.76 0.74 0.75 A 0.24 0.26 0.25 0000 --- --- --- --- 020097 00000 ------------ G 0.75 0.72 0.74 A 0.25 0.28 0.26 0000 --- --- --- --- 020146 00261 FRAME SHIFT - 0.70 0.68 0.69 + 0.30 0.32 0.31 0087 GT- GTG --- --- 020182 00297 SYNON A 0.52 0.75 0.64 G 0.48 0.25 0.36 0099 ACA ACG THR(T) THR(T) 020203 00318 SYNON C 0.75 1.00 0.88 T 0.25 0.00 0.12 0106 AAC AAT ASN(N) ASN(N) 020301 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 020348 00000 ------------ T 0.83 0.76 0.80 A 0.17 0.24 0.20 0000 --- --- --- --- 020419 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 020422 00000 ------------ T 0.52 0.76 0.64 C 0.48 0.24 0.36 0000 --- --- --- --- 020424 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 020438 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 020447 00000 ------------ G 0.79 0.76 0.78 A 0.21 0.24 0.22 0000 --- --- --- --- 020485 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 020494 00000 ------------ C 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 020527 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 020530 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 020539 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 020705 00000 ------------ A 0.52 0.76 0.64 G 0.48 0.24 0.36 0000 --- --- --- --- 020752 00000 ------------ T 0.83 0.76 0.80 C 0.17 0.24 0.20 0000 --- --- --- --- 020852 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020887 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 020976 00000 ------------ G 0.86 0.74 0.80 A 0.14 0.26 0.20 0000 --- --- --- --- 021043 00000 ------------ G 0.83 0.58 0.70 A 0.17 0.42 0.30 0000 --- --- --- --- 021045 00000 ------------ A 0.50 0.74 0.62 G 0.50 0.26 0.38 0000 --- --- --- --- 021047 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 021150 00000 ------------ A 0.47 0.74 0.61 G 0.53 0.26 0.39 0000 --- --- --- --- 021160 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 021209 00000 ------------ A 0.47 0.74 0.61 G 0.53 0.26 0.39 0000 --- --- --- --- 021270 00000 ------------ A 0.71 0.74 0.72 G 0.29 0.26 0.28 0000 --- --- --- --- 021272 00000 ------------ G 0.71 0.74 0.72 A 0.29 0.26 0.28 0000 --- --- --- --- 021404 00467 NON-SYN C 0.78 0.85 0.81 T 0.23 0.15 0.19 0156 CCG CTG PRO(P) LEU(L) 021419 00482 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0161 CGC CAC ARG(R) HIS(H) 021463 00526 NON-SYN C 0.77 1.00 0.88 G 0.23 0.00 0.12 0176 CGC GGC ARG(R) GLY(G) 021532 00595 NON-SYN C 0.98 0.93 0.96 T 0.02 0.07 0.04 0199 CGC TGC ARG(R) CYS(C) 021583 00646 NON-SYN T 0.83 0.76 0.79 A 0.17 0.24 0.21 0216 TTC ATC PHE(F) ILE(I) 021594 00657 SYNON C 0.78 1.00 0.89 T 0.22 0.00 0.11 0219 CAC CAT HIS(H) HIS(H) 021618 00681 SYNON G 0.87 0.76 0.82 A 0.13 0.24 0.18 0227 CCG CCA PRO(P) PRO(P) 021640 00703 NON-SYN G 0.78 1.00 0.89 A 0.22 0.00 0.11 0235 GGC AGC GLY(G) SER(S) 021705 00768 SYNON C 0.98 0.91 0.95 A 0.02 0.09 0.05 0256 ATC ATA ILE(I) ILE(I) 021708 00771 SYNON C 0.83 0.76 0.79 T 0.17 0.24 0.21 0257 CCC CCT PRO(P) PRO(P) 021733 00796 NON-SYN C 0.78 1.00 0.89 A 0.22 0.00 0.11 0266 CTG ATG LEU(L) MET(M) 021740 00803 NON-SYN G 0.78 1.00 0.89 C 0.22 0.00 0.11 0268 GGG GCG GLY(G) ALA(A) 021766 00829 NON-SYN G 0.83 0.76 0.79 A 0.17 0.24 0.21 0277 GTG ATG VAL(V) MET(M) 021867 00930 SYNON G 0.78 1.00 0.89 A 0.22 0.00 0.11 0310 CTG CTA LEU(L) LEU(L) 021996 01059 FRAME SHIFT - 0.04 0.15 0.10 + 0.96 0.85 0.90 0353 AA- AAC --- --- 022033 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 022053 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 022162 00000 ------------ A 0.48 0.76 0.61 G 0.52 0.24 0.39 0000 --- --- --- --- 022204 00000 ------------ - 0.34 0.24 0.29 + 0.66 0.76 0.71 0000 --- --- --- --- 022490 00000 ------------ - 0.46 0.46 0.46 + 0.54 0.54 0.54 0000 --- --- --- --- 022518 00000 ------------ T 0.80 0.90 0.85 C 0.20 0.10 0.15 0000 --- --- --- --- 022962 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 023043 00000 ------------ T 0.55 0.74 0.64 G 0.45 0.26 0.36 0000 --- --- --- --- 023339 00000 ------------ C 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 023340 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 023408 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 023413 00000 ------------ A 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 023444 00000 ------------ C 0.75 0.78 0.77 T 0.25 0.22 0.23 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000164: CCCTTCCT 001435: TGAGGAATTGCCACAATTTTTTCCTGCGCCTGCACC 003338: A 003340: TG 003955: T 005417: T 012879: TAAA 013136: GGCAGTTT 014274: TAGTGGTGGGCG 014700: GG 015628: T 017833: T 017904: GTGTGGACAGAAG 019467: C 019670: CCC 020146: G 020419: T 020424: TGGGCTCG 021996: C 022204: CACA 022490: CACA 022962: ACACACAGACACATAGA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000176 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 000451 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000527 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 000640 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 000951 -----** NON-SYN A 0.98 0.95 0.97 G 0.02 0.05 0.03 0026 AAG AGG LYS(K) ARG(R) 001480 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001501 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 001631 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 001846 00000 ------------ G 0.81 0.45 0.61 A 0.19 0.55 0.39 0000 --- --- --- --- 001848 00000 ------------ T 0.84 0.81 0.82 C 0.16 0.19 0.18 0000 --- --- --- --- 002173 00000 ------------ T 0.68 0.38 0.55 C 0.32 0.62 0.45 0000 --- --- --- --- 002179 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 002343 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 002608 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 003113 00000 ------------ G 0.83 0.67 0.76 A 0.17 0.33 0.24 0000 --- --- --- --- 003179 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004021 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004456 00000 ------------ C 0.95 0.69 0.83 T 0.05 0.31 0.17 0000 --- --- --- --- 004967 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 005052 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005245 00000 ------------ - 0.05 0.27 0.16 + 0.95 0.73 0.84 0000 --- --- --- --- 005765 00000 ------------ T 0.83 0.70 0.76 C 0.17 0.30 0.24 0000 --- --- --- --- 007459 00000 ------------ - 0.78 0.71 0.75 + 0.22 0.29 0.25 0000 --- --- --- --- 007954 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008803 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009018 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009412 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009570 00000 ------------ G 0.55 0.75 0.65 A 0.45 0.25 0.35 0000 --- --- --- --- 010966 00000 ------------ A 1.00 0.70 0.85 G 0.00 0.30 0.15 0000 --- --- --- --- 011419 00000 ------------ C 0.87 0.68 0.77 A 0.13 0.33 0.23 0000 --- --- --- --- 011532 00000 ------------ A 0.89 0.69 0.79 G 0.11 0.31 0.21 0000 --- --- --- --- 013203 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 013345 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013481 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014066 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 014317 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 015053 00000 ------------ T 0.85 0.70 0.77 C 0.15 0.30 0.23 0000 --- --- --- --- 015730 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016854 00000 ------------ C 0.59 0.74 0.66 G 0.41 0.26 0.34 0000 --- --- --- --- 018199 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.23 0000 --- --- --- --- 018223 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 018575 00000 ------------ T 1.00 0.82 0.91 C 0.00 0.18 0.09 0000 --- --- --- --- 018644 00000 ------------ A 0.88 0.68 0.78 C 0.12 0.32 0.22 0000 --- --- --- --- 018862 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018931 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 019174 00000 ------------ T 0.87 0.70 0.78 A 0.13 0.30 0.22 0000 --- --- --- --- 019227 00000 ------------ A 0.87 0.70 0.78 G 0.13 0.30 0.22 0000 --- --- --- --- 019703 00000 ------------ G 0.92 0.70 0.81 T 0.08 0.30 0.19 0000 --- --- --- --- 020023 00000 ------------ - 0.14 0.30 0.24 + 0.86 0.70 0.76 0000 --- --- --- --- 020209 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 020341 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 020699 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 020988 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 021898 00000 ------------ C 0.91 0.66 0.79 T 0.09 0.34 0.21 0000 --- --- --- --- 022087 00000 ------------ A 0.92 0.67 0.80 G 0.08 0.33 0.20 0000 --- --- --- --- 022163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022354 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 022413 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 022879 00000 ------------ A 0.76 0.70 0.72 T 0.24 0.30 0.28 0000 --- --- --- --- 023320 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 023775 00000 ------------ - 0.10 0.32 0.21 + 0.90 0.68 0.79 0000 --- --- --- --- 024013 00000 ------------ G 0.83 1.00 0.92 A 0.17 0.00 0.08 0000 --- --- --- --- 024231 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 024460 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 024888 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 025506 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 027742 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 028203 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 028207 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 028265 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 029017 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029120 00000 ------------ C 0.52 0.80 0.66 G 0.48 0.20 0.34 0000 --- --- --- --- 029735 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 029807 00000 ------------ A 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 029949 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030202 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 030225 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030306 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 030899 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 030921 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 031618 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 031657 00000 ------------ C 0.54 0.80 0.67 G 0.46 0.20 0.33 0000 --- --- --- --- 031949 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 032424 00000 ------------ G 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 032604 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 032964 00000 ------------ A 0.50 0.80 0.66 G 0.50 0.20 0.34 0000 --- --- --- --- 033480 00000 ------------ C 0.78 0.80 0.79 T 0.22 0.20 0.21 0000 --- --- --- --- 035227 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 035508 -----** SYNON T 0.90 1.00 0.95 C 0.10 0.00 0.05 0690 AAT AAC ASN(N) ASN(N) 035640 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 035739 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035824 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 035881 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036024 00000 ------------ G 0.71 0.74 0.72 C 0.29 0.26 0.28 0000 --- --- --- --- 036139 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 036444 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 036962 00000 ------------ T 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 037071 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 037138 00000 ------------ G 0.77 0.46 0.62 A 0.23 0.54 0.38 0000 --- --- --- --- 037142 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 037165 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 037181 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 037319 00000 ------------ G 0.90 0.83 0.87 A 0.10 0.17 0.13 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005245: A 007459: T 020023: TAAT 023775: TTATC 030921: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000218 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000375 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 000945 00000 ------------ C 0.93 0.71 0.84 A 0.07 0.29 0.16 0000 --- --- --- --- 000946 00000 ------------ C 0.93 0.74 0.85 A 0.07 0.26 0.15 0000 --- --- --- --- 000956 00000 ------------ C 0.93 0.71 0.84 A 0.07 0.29 0.16 0000 --- --- --- --- 000980 00000 ------------ - 0.11 0.22 0.16 + 0.89 0.78 0.84 0000 --- --- --- --- 001123 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001193 00000 ------------ C 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 001228 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001704 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001745 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001908 00000 ------------ C 0.56 0.57 0.56 A 0.44 0.43 0.44 0000 --- --- --- --- 002195 00000 ------------ C 0.94 0.76 0.85 T 0.06 0.24 0.15 0000 --- --- --- --- 002365 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002499 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002531 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002547 00000 ------------ C 0.94 0.76 0.85 T 0.06 0.24 0.15 0000 --- --- --- --- 003011 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003028 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003074 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003339 00000 ------------ C 0.79 0.48 0.64 T 0.21 0.52 0.36 0000 --- --- --- --- 003407 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 003415 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003496 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003551 00000 ------------ C 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 003586 00000 ------------ G 0.88 0.60 0.74 A 0.12 0.40 0.26 0000 --- --- --- --- 003610 00000 ------------ G 0.85 0.60 0.73 A 0.15 0.40 0.27 0000 --- --- --- --- 003742 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004157 00195 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0034 CGG CAG ARG(R) GLN(Q) 004459 00497 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0135 CCA GCA PRO(P) ALA(A) 004863 00901 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0269 ACG ACA THR(T) THR(T) 004929 00967 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0291 GGC GGT GLY(G) GLY(G) 005088 01126 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0344 GAG GAA GLU(E) GLU(E) 005113 01151 NON-SYN C 0.98 0.95 0.97 A 0.02 0.05 0.03 0353 CAC AAC HIS(H) ASN(N) 005145 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005395 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005833 01525 SYNON C 0.74 0.96 0.85 T 0.26 0.04 0.15 0477 CCC CCT PRO(P) PRO(P) 006055 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006214 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006271 00000 ------------ G 0.65 0.57 0.61 A 0.35 0.43 0.39 0000 --- --- --- --- 006591 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006672 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 006793 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 007252 01869 NON-SYN C 0.87 0.61 0.73 G 0.13 0.39 0.27 0592 CCG CGG PRO(P) ARG(R) 007272 01889 NON-SYN C 1.00 0.98 0.99 A 0.00 0.02 0.01 0599 CCC ACC PRO(P) THR(T) 007503 02120 3' UTR G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 007740 02357 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008162 02779 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008189 02806 3' UTR C 0.75 0.96 0.85 A 0.25 0.04 0.15 0000 --- --- --- --- 008390 00000 ------------ A 0.81 0.96 0.88 G 0.19 0.04 0.12 0000 --- --- --- --- 008593 00000 ------------ C 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 008609 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009156 00000 ------------ C 0.93 0.80 0.87 G 0.07 0.20 0.13 0000 --- --- --- --- 009254 00000 ------------ C 0.69 0.57 0.63 A 0.31 0.42 0.37 0000 --- --- --- --- 009800 00000 ------------ G 0.74 0.96 0.85 A 0.26 0.04 0.15 0000 --- --- --- --- 009822* 009875 00000 ------------ G 0.89 0.59 0.74 T 0.11 0.41 0.26 0000 --- --- --- --- 009894 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000980: GC 001745: A 003407: T 006055: AG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 009822 A 0.20 0.52 0.36 C 0.00 0.02 0.01 G 0.80 0.46 0.63 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000200 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000931 00000 ------------ C 0.84 0.68 0.77 A 0.16 0.32 0.23 0000 --- --- --- --- 001151 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001835 00000 ------------ C 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 002190 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002567 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003879 00000 ------------ G 0.85 0.74 0.79 C 0.15 0.26 0.21 0000 --- --- --- --- 004012 00036 SYNON A 0.98 0.96 0.97 G 0.02 0.04 0.03 0012 ACA ACG THR(T) THR(T) 004570 00594 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0198 ATC ATT ILE(I) ILE(I) 004608 00632 NON-SYN G 1.00 0.93 0.97 C 0.00 0.07 0.03 0211 GGG GCG GLY(G) ALA(A) 004870 00894 FRAME SHIFT - 0.15 0.26 0.20 + 0.85 0.74 0.80 0298 GA- GAA --- --- 005111 01135 NON-SYN G 1.00 0.95 0.98 A 0.00 0.05 0.02 0379 GTT ATT VAL(V) ILE(I) 005158 01182 SYNON C 0.79 0.75 0.77 A 0.21 0.25 0.23 0394 GGC GGA GLY(G) GLY(G) 005327 01351 FRAME SHIFT - 1.00 0.98 0.99 + 0.00 0.02 0.01 0451 -TG TTG --- --- 005753 01777 3' UTR C 0.81 0.77 0.79 A 0.19 0.23 0.21 0000 --- --- --- --- 005793 01817 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006393 02417 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006533 02557 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006640 02664 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006716 02740 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006832 02856 3' UTR A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 008331 00000 ------------ - 0.22 0.26 0.24 + 0.78 0.74 0.76 0000 --- --- --- --- 008536 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008677 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008708 00000 ------------ C 0.87 0.74 0.81 A 0.13 0.26 0.19 0000 --- --- --- --- 008988 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 010411 00000 ------------ T 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 010493 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010537 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010774 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010895 00000 ------------ C 0.85 0.74 0.80 G 0.15 0.26 0.20 0000 --- --- --- --- 011090 00000 ------------ C 0.85 0.74 0.80 A 0.15 0.26 0.20 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004870: AGAGGAGGA 005327: T 008331: C 008677: CCATGCTGTGA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000126 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 000137 00000 ------------ C 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 000160 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000162 00000 ------------ A 0.96 0.87 0.91 G 0.04 0.13 0.09 0000 --- --- --- --- 000320 00000 ------------ A 0.96 0.78 0.87 G 0.04 0.22 0.13 0000 --- --- --- --- 000774 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 000861 00000 ------------ C 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 001299 00000 ------------ - 0.09 0.12 0.10 + 0.91 0.88 0.90 0000 --- --- --- --- 001691 00000 ------------ A 0.96 0.77 0.87 G 0.04 0.23 0.13 0000 --- --- --- --- 001916 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001917 00000 ------------ A 0.94 0.89 0.91 G 0.06 0.11 0.09 0000 --- --- --- --- 002045 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 002094 00000 ------------ - 0.04 0.12 0.08 + 0.96 0.88 0.92 0000 --- --- --- --- 002697 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 002720 00000 ------------ G 0.56 0.70 0.63 A 0.44 0.30 0.37 0000 --- --- --- --- 003160 00000 ------------ C 0.95 0.76 0.86 T 0.05 0.24 0.14 0000 --- --- --- --- 003296 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003302 00000 ------------ T 0.80 0.65 0.72 C 0.20 0.35 0.28 0000 --- --- --- --- 003452 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 003631 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003711 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004077 00000 ------------ C 0.96 0.78 0.87 T 0.04 0.22 0.13 0000 --- --- --- --- 004120 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004463 00000 ------------ A 0.96 0.79 0.88 C 0.04 0.21 0.12 0000 --- --- --- --- 004803 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004865 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004891 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 005079 00000 ------------ T 0.68 0.61 0.65 C 0.32 0.39 0.35 0000 --- --- --- --- 005111 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005238 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005421 00000 ------------ T 0.79 0.77 0.78 G 0.21 0.23 0.22 0000 --- --- --- --- 005576 00000 ------------ T 0.95 0.77 0.86 C 0.05 0.23 0.14 0000 --- --- --- --- 005913 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006424 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 006597 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 007070 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007201 00000 ------------ T 0.86 0.82 0.84 C 0.14 0.18 0.16 0000 --- --- --- --- 007439 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007442 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007862 00222 NON-SYN A 0.85 0.78 0.82 G 0.15 0.22 0.18 0049 AGC GGC SER(S) GLY(G) 008032 00392 SYNON G 0.85 1.00 0.92 T 0.15 0.00 0.08 0105 CTG CTT LEU(L) LEU(L) 008882 01242 NON-SYN C 0.47 0.72 0.62 G 0.53 0.28 0.38 0389 CGA GGA ARG(R) GLY(G) 008883 01243 NON-SYN G 0.93 1.00 0.97 T 0.07 0.00 0.03 0389 CGA CTA ARG(R) LEU(L) 009559 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010067 00000 ------------ - 0.91 0.79 0.86 + 0.09 0.21 0.14 0000 --- --- --- --- 010325 00000 ------------ T 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 010659 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010709 00000 ------------ C 0.96 0.77 0.87 T 0.04 0.23 0.13 0000 --- --- --- --- 010825 00000 ------------ C 0.98 0.97 0.98 T 0.02 0.03 0.02 0000 --- --- --- --- 010843 00000 ------------ T 0.52 0.68 0.60 C 0.48 0.33 0.40 0000 --- --- --- --- 010987 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011884 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 012091 00000 ------------ A 0.78 0.76 0.77 C 0.22 0.24 0.23 0000 --- --- --- --- 012114 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012129 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012361 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012562 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 012815 00000 ------------ G 0.95 0.75 0.86 A 0.05 0.25 0.14 0000 --- --- --- --- 012841 00000 ------------ G 0.93 0.75 0.85 A 0.07 0.25 0.15 0000 --- --- --- --- 012998 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 013291 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013408 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 013805 00000 ------------ C 0.81 0.75 0.78 T 0.19 0.25 0.22 0000 --- --- --- --- 013836 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014238 00000 ------------ C 0.85 0.77 0.81 G 0.15 0.23 0.19 0000 --- --- --- --- 014495 00000 ------------ A 0.78 0.82 0.80 C 0.22 0.18 0.20 0000 --- --- --- --- 014572 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014968 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 015149 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 015151 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015243 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 015304 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 015321 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015809 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 015959 00000 ------------ - 0.06 0.25 0.15 + 0.94 0.75 0.85 0000 --- --- --- --- 016158 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016259 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016417 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000126: A 001299: G 002094: AA 003452: T 010067: A 015959: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000315 00000 ------------ - 0.17 0.33 0.25 + 0.83 0.67 0.75 0000 --- --- --- --- 000493 00000 ------------ G 0.59 0.59 0.59 C 0.41 0.41 0.41 0000 --- --- --- --- 000626 00000 ------------ G 0.53 0.60 0.56 A 0.47 0.40 0.44 0000 --- --- --- --- 000912 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000929 00000 ------------ T 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 000933 00000 ------------ A 0.57 0.57 0.57 T 0.43 0.43 0.43 0000 --- --- --- --- 000956 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000969 00000 ------------ C 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 001061 00000 ------------ T 0.87 0.82 0.84 C 0.13 0.18 0.16 0000 --- --- --- --- 001526 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001587 00000 ------------ C 0.56 0.59 0.57 T 0.44 0.41 0.43 0000 --- --- --- --- 001833 00000 ------------ T 0.59 0.59 0.59 C 0.41 0.41 0.41 0000 --- --- --- --- 002402 00000 ------------ A 0.79 0.65 0.72 T 0.21 0.35 0.28 0000 --- --- --- --- 002482 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002567 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002689 00000 ------------ C 0.65 0.76 0.70 T 0.35 0.24 0.30 0000 --- --- --- --- 002791 00000 ------------ T 0.65 0.76 0.70 A 0.35 0.24 0.30 0000 --- --- --- --- 002877 00000 ------------ G 0.54 0.59 0.57 A 0.46 0.41 0.43 0000 --- --- --- --- 002937 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003197 00000 ------------ G 0.55 0.59 0.57 A 0.45 0.41 0.43 0000 --- --- --- --- 003566 00000 ------------ G 0.78 0.67 0.73 A 0.22 0.33 0.27 0000 --- --- --- --- 003752 00000 ------------ C 0.91 0.59 0.75 G 0.09 0.41 0.25 0000 --- --- --- --- 003814 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003853 00000 ------------ T 0.92 0.59 0.76 C 0.08 0.41 0.24 0000 --- --- --- --- 003918 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003943 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003958 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003985 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004173 00173 5' UTR T 0.90 0.57 0.73 C 0.10 0.43 0.27 0000 --- --- --- --- 004200 00200 5' UTR T 0.92 0.57 0.74 C 0.08 0.43 0.26 0000 --- --- --- --- 004265 00265 NON-SYN G 0.46 0.67 0.56 A 0.54 0.33 0.44 0016 GGA AGA GLY(G) ARG(R) 004298 00298 NON-SYN C 0.91 0.59 0.76 G 0.09 0.41 0.24 0027 CAA GAA GLN(Q) GLU(E) 004471 00471 SYNON G 0.65 0.76 0.71 A 0.35 0.24 0.29 0084 CTG CTA LEU(L) LEU(L) 004742 00742 SYNON C 0.65 0.83 0.73 A 0.35 0.17 0.27 0175 CGG AGG ARG(R) ARG(R) 004878 00878 NON-SYN C 0.96 1.00 0.98 G 0.04 0.00 0.02 0220 TCC TGC SER(S) CYS(C) 005059 01059 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0280 GGC GGT GLY(G) GLY(G) 005272 01272 SYNON G 0.63 0.67 0.65 C 0.37 0.33 0.35 0351 GGG GGC GLY(G) GLY(G) 005458 01458 SYNON G 0.42 0.61 0.51 A 0.58 0.39 0.49 0413 CTG CTA LEU(L) LEU(L) 005628 01628 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006645 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 006668 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006838 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007207 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 007332 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 007405 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007458 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007493 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007607 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008059 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 008094 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008210 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008274 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008426 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008817 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 008820 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009082* 009265 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009303 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009593 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009685 00000 ------------ C 0.54 0.80 0.67 G 0.46 0.20 0.33 0000 --- --- --- --- 009818 00000 ------------ C 0.52 0.80 0.66 A 0.48 0.20 0.34 0000 --- --- --- --- 009830 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000315: G 008059: CTG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 009082 C 0.81 1.00 0.90 G 0.17 0.00 0.09 T 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000273 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000364 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 000680 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001109 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001191 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002555 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002773 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002776 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003112 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003207 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003647 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003792 00045 5' UTR G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003826 00079 5' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004134 00387 NON-SYN T 0.89 0.87 0.88 C 0.11 0.13 0.12 0064 TGG CGG TRP(W) ARG(R) 005001 01254 NON-SYN C 0.93 1.00 0.97 T 0.07 0.00 0.03 0353 CGC TGC ARG(R) CYS(C) 005072 01325 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0376 CGC CGT ARG(R) ARG(R) 005163 00000 ------------ G 0.90 0.87 0.88 T 0.10 0.13 0.12 0000 --- --- --- --- 005231 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005308 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005518 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 005584 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005819 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006238 01466 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006446 01674 3' UTR G 0.90 0.87 0.88 C 0.10 0.13 0.12 0000 --- --- --- --- 006483 01711 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006553 01781 3' UTR C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 006787 02015 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006862 02090 3' UTR C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 006873 02101 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007076 02304 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007210 02438 3' UTR T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 007491 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007502 00000 ------------ A 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 007839 00000 ------------ T 0.63 0.86 0.76 C 0.37 0.14 0.24 0000 --- --- --- --- 008552 00000 ------------ - 0.22 0.00 0.12 + 0.78 1.00 0.88 0000 --- --- --- --- 008756 00000 ------------ T 0.85 0.87 0.86 C 0.15 0.13 0.14 0000 --- --- --- --- 009284 00000 ------------ C 0.69 0.87 0.78 T 0.31 0.13 0.22 0000 --- --- --- --- 009476 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009648 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010395 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010426 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 010481 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010629 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 010984 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000364: A 003207: GA 003647: A 008552: GACT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000209 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000258 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000657 00000 ------------ C 0.89 0.64 0.80 G 0.11 0.36 0.20 0000 --- --- --- --- 000780 00000 ------------ G 1.00 0.86 0.95 A 0.00 0.14 0.05 0000 --- --- --- --- 000800 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001009 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 001431 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 001472 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001581 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001842 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002142 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002287 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003040 00000 ------------ - 0.07 0.15 0.11 + 0.93 0.85 0.89 0000 --- --- --- --- 003041 00000 ------------ T 0.89 0.80 0.85 C 0.11 0.20 0.15 0000 --- --- --- --- 003128 00000 ------------ G 0.50 0.67 0.59 T 0.50 0.33 0.41 0000 --- --- --- --- 003134 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 003290 00000 ------------ C 0.74 0.58 0.67 T 0.26 0.42 0.33 0000 --- --- --- --- 003338 00000 ------------ T 0.98 0.76 0.88 C 0.02 0.24 0.12 0000 --- --- --- --- 003863 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003930 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 004100 00000 ------------ - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 004844 00000 ------------ A 0.90 0.65 0.78 T 0.10 0.35 0.22 0000 --- --- --- --- 004871 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004921 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 005000 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005337 00000 ------------ T 0.72 0.28 0.51 A 0.28 0.72 0.49 0000 --- --- --- --- 006157 00000 ------------ C 0.52 0.81 0.67 T 0.48 0.19 0.33 0000 --- --- --- --- 006587 00000 ------------ T 0.54 0.63 0.59 G 0.46 0.37 0.41 0000 --- --- --- --- 006630 00000 ------------ C 0.74 0.67 0.71 T 0.26 0.33 0.29 0000 --- --- --- --- 006812 00000 ------------ C 0.91 0.67 0.79 T 0.09 0.33 0.21 0000 --- --- --- --- 007132 00000 ------------ T 0.98 0.87 0.92 C 0.02 0.13 0.08 0000 --- --- --- --- 007196 00000 ------------ G 0.89 0.67 0.78 A 0.11 0.33 0.22 0000 --- --- --- --- 007751 00000 ------------ G 0.76 0.62 0.70 A 0.24 0.38 0.30 0000 --- --- --- --- 008543 00000 ------------ T 0.38 0.72 0.53 G 0.62 0.28 0.47 0000 --- --- --- --- 008566 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008607 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008623 00000 ------------ - 0.10 0.35 0.22 + 0.90 0.65 0.78 0000 --- --- --- --- 008772 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008840 00000 ------------ G 0.67 0.83 0.74 A 0.33 0.17 0.26 0000 --- --- --- --- 008854 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008976 00000 ------------ G 0.79 0.55 0.68 A 0.21 0.45 0.32 0000 --- --- --- --- 009060 00000 ------------ C 0.90 0.64 0.78 G 0.10 0.36 0.22 0000 --- --- --- --- 009189 00000 ------------ G 0.98 0.88 0.93 A 0.02 0.12 0.07 0000 --- --- --- --- 009395 00000 ------------ A 0.50 0.58 0.54 G 0.50 0.42 0.46 0000 --- --- --- --- 009598 00000 ------------ - 0.02 0.13 0.08 + 0.98 0.87 0.92 0000 --- --- --- --- 009734 00000 ------------ - 0.16 0.44 0.28 + 0.84 0.56 0.72 0000 --- --- --- --- 009801 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009923 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 010050 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 010397 00000 ------------ C 0.88 0.97 0.92 T 0.12 0.03 0.08 0000 --- --- --- --- 010398 00000 ------------ G 0.88 0.59 0.73 A 0.12 0.41 0.27 0000 --- --- --- --- 010699 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 011146 00000 ------------ G 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 011492 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 011765 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011880 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 012025 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 012647 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012712 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 012814 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012884 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012960 00000 ------------ T 0.50 0.82 0.66 G 0.50 0.18 0.34 0000 --- --- --- --- 013109 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013405 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013535 00000 ------------ C 0.77 0.32 0.55 T 0.23 0.68 0.45 0000 --- --- --- --- 013536 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013724 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013805 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 013868 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014079 00000 ------------ A 0.98 0.86 0.92 G 0.02 0.14 0.08 0000 --- --- --- --- 014345 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 014348 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 014539 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014792 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014815 00000 ------------ T 0.60 0.64 0.62 G 0.40 0.36 0.38 0000 --- --- --- --- 015270 00000 ------------ C 0.88 0.86 0.87 T 0.12 0.14 0.13 0000 --- --- --- --- 015511 00000 ------------ T 0.52 0.64 0.58 G 0.48 0.36 0.42 0000 --- --- --- --- 015524 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 015635 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015676 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015802 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 015833 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015844 00000 ------------ A 0.73 0.52 0.63 T 0.27 0.48 0.37 0000 --- --- --- --- 015909 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 015954 00000 ------------ C 0.78 0.70 0.74 G 0.22 0.30 0.26 0000 --- --- --- --- 016306 00482 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0143 GCA GTA ALA(A) VAL(V) 016463 00639 3' UTR G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 016614 00790 3' UTR C 0.95 0.81 0.88 T 0.05 0.19 0.12 0000 --- --- --- --- 016783 00959 3' UTR G 0.89 0.69 0.79 A 0.11 0.31 0.21 0000 --- --- --- --- 016800 00976 3' UTR C 0.89 0.69 0.79 T 0.11 0.31 0.21 0000 --- --- --- --- 016874 01050 3' UTR A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 016953 00000 ------------ A 0.80 0.68 0.74 G 0.20 0.32 0.26 0000 --- --- --- --- 017082 00000 ------------ G 0.80 0.64 0.72 A 0.20 0.36 0.28 0000 --- --- --- --- 017139 00000 ------------ - 0.11 0.32 0.21 + 0.89 0.68 0.79 0000 --- --- --- --- 017343 00000 ------------ A 0.93 0.68 0.80 G 0.07 0.33 0.20 0000 --- --- --- --- 017382 00000 ------------ T 0.97 0.86 0.91 G 0.03 0.14 0.09 0000 --- --- --- --- 017392 00000 ------------ A 0.93 0.69 0.80 G 0.07 0.31 0.20 0000 --- --- --- --- 017893 00000 ------------ G 0.94 0.79 0.86 A 0.06 0.21 0.14 0000 --- --- --- --- 017983 00000 ------------ - 0.06 0.13 0.10 + 0.94 0.87 0.90 0000 --- --- --- --- 017995 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 018143 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 018144 00000 ------------ C 0.89 0.68 0.78 T 0.11 0.33 0.22 0000 --- --- --- --- 018236 00000 ------------ G 0.74 0.71 0.72 A 0.26 0.29 0.28 0000 --- --- --- --- 018420 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 018440 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 018763 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 018804 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 018948 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018950 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 019103 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019199 00000 ------------ G 0.87 0.89 0.88 A 0.13 0.11 0.12 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002287: GGGGC 003040: CTGGGT 004100: AGGTC 008623: CTTCCTTC 009598: GA 009734: CC 012025: T 012884: TCCT 017139: GA 017983: GAAGCCACAGTCCATTCATTGTAGGGAGTATGGACCAG 018143: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000386 00000 ------------ - 0.48 0.63 0.56 + 0.52 0.37 0.44 0000 --- --- --- --- 000864 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001138 00000 ------------ - 0.79 1.00 0.89 + 0.21 0.00 0.11 0000 --- --- --- --- 001158 00000 ------------ G 0.44 0.67 0.58 C 0.56 0.33 0.42 0000 --- --- --- --- 001440 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 001586 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001649 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001661 00000 ------------ C 0.57 0.59 0.58 T 0.43 0.41 0.42 0000 --- --- --- --- 001764 00000 ------------ G 0.82 0.61 0.71 A 0.18 0.39 0.29 0000 --- --- --- --- 002102 00156 SYNON G 0.85 1.00 0.93 C 0.15 0.00 0.07 0041 CCG CCC PRO(P) PRO(P) 002172 00000 ------------ T 0.50 0.63 0.56 C 0.50 0.37 0.44 0000 --- --- --- --- 002180 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002274 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 002619 00000 ------------ G 0.96 0.76 0.86 A 0.04 0.24 0.14 0000 --- --- --- --- 002902 00000 ------------ C 0.97 0.94 0.96 T 0.03 0.06 0.04 0000 --- --- --- --- 002905 00000 ------------ T 0.69 0.69 0.69 C 0.31 0.31 0.31 0000 --- --- --- --- 002926 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 002987 00000 ------------ G 0.69 0.69 0.69 T 0.31 0.31 0.31 0000 --- --- --- --- 003388 00000 ------------ T 0.61 0.61 0.61 C 0.39 0.39 0.39 0000 --- --- --- --- 003480 00000 ------------ C 0.85 1.00 0.91 T 0.15 0.00 0.09 0000 --- --- --- --- 003604 00000 ------------ - 0.98 0.82 0.90 + 0.02 0.18 0.10 0000 --- --- --- --- 003665 00000 ------------ T 0.62 0.61 0.62 C 0.38 0.39 0.38 0000 --- --- --- --- 003896 00000 ------------ A 0.96 1.00 0.97 G 0.04 0.00 0.03 0000 --- --- --- --- 004216 00000 ------------ G 0.94 0.68 0.82 A 0.06 0.32 0.18 0000 --- --- --- --- 005003 00000 ------------ T 0.98 0.82 0.90 C 0.02 0.18 0.10 0000 --- --- --- --- 005158 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005287 00798 SYNON A 0.68 0.61 0.65 G 0.32 0.39 0.35 0255 TCA TCG SER(S) SER(S) 005304 00815 NON-SYN G 0.68 0.61 0.65 A 0.32 0.39 0.35 0261 CGG CAG ARG(R) GLN(Q) 005354 00000 ------------ A 0.98 0.84 0.91 T 0.02 0.16 0.09 0000 --- --- --- --- 005431 00000 ------------ G 0.67 0.61 0.64 A 0.33 0.39 0.36 0000 --- --- --- --- 006036 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006081 00000 ------------ A 0.64 0.64 0.64 G 0.36 0.36 0.36 0000 --- --- --- --- 006336 00978 SYNON C 1.00 0.95 0.98 G 0.00 0.05 0.02 0315 GTC GTG VAL(V) VAL(V) 006488 00000 ------------ G 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 006542 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 006807 00000 ------------ T 0.65 0.63 0.64 C 0.35 0.37 0.36 0000 --- --- --- --- 007090 00000 ------------ A 0.78 0.57 0.68 G 0.22 0.43 0.32 0000 --- --- --- --- 007092 00000 ------------ G 0.80 0.64 0.72 C 0.20 0.36 0.28 0000 --- --- --- --- 007244 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007478 00998 NON-SYN A 0.80 0.63 0.72 G 0.20 0.37 0.28 0322 AAC AGC ASN(N) SER(S) 007605 01125 SYNON G 0.61 0.63 0.62 T 0.39 0.37 0.38 0364 ACG ACT THR(T) THR(T) 007746 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 007902 00000 ------------ C 0.93 0.90 0.91 T 0.07 0.10 0.09 0000 --- --- --- --- 008168 00000 ------------ C 0.65 0.66 0.65 T 0.35 0.34 0.35 0000 --- --- --- --- 008187 00000 ------------ C 0.65 0.66 0.65 T 0.35 0.34 0.35 0000 --- --- --- --- 008328 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008429 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008630 00000 ------------ - 0.35 0.34 0.35 + 0.65 0.66 0.65 0000 --- --- --- --- 009013 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 009115 00000 ------------ A 0.98 0.89 0.93 G 0.02 0.11 0.07 0000 --- --- --- --- 009116 00000 ------------ G 0.70 0.74 0.72 C 0.30 0.26 0.28 0000 --- --- --- --- 009489 00000 ------------ G 0.68 0.76 0.72 A 0.33 0.24 0.28 0000 --- --- --- --- 009546 00000 ------------ C 0.80 1.00 0.91 T 0.20 0.00 0.09 0000 --- --- --- --- 009615 00000 ------------ G 0.71 0.74 0.72 A 0.29 0.26 0.28 0000 --- --- --- --- 010764 00000 ------------ A 0.78 0.80 0.79 G 0.23 0.20 0.21 0000 --- --- --- --- 010901 00000 ------------ - 0.80 0.80 0.80 + 0.20 0.20 0.20 0000 --- --- --- --- 011027 00000 ------------ A 0.95 0.97 0.96 C 0.05 0.03 0.04 0000 --- --- --- --- 011449 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 011763 01322 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0430 CGT CAT ARG(R) HIS(H) 011924* 011925 00000 ------------ G 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 012384 01485 SYNON A 0.96 0.81 0.89 G 0.04 0.19 0.11 0484 CAA CAG GLN(Q) GLN(Q) 012516 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012619 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012754 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 012757 00000 ------------ T 0.79 0.80 0.80 G 0.21 0.20 0.20 0000 --- --- --- --- 012764 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013137 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013534 00000 ------------ C 0.50 0.54 0.52 G 0.50 0.46 0.48 0000 --- --- --- --- 013759 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014237 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 015098 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015114 00000 ------------ G 0.50 0.54 0.52 C 0.50 0.46 0.48 0000 --- --- --- --- 015166 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015513 00000 ------------ C 0.95 0.97 0.96 T 0.05 0.03 0.04 0000 --- --- --- --- 015592 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 016198 01935 SYNON G 0.92 0.89 0.90 A 0.08 0.11 0.10 0634 CTG CTA LEU(L) LEU(L) 016401 02138 3' UTR C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 016886 00000 ------------ C 0.81 0.80 0.81 T 0.19 0.20 0.19 0000 --- --- --- --- 017079 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017316 00000 ------------ C 0.81 0.79 0.80 T 0.19 0.21 0.20 0000 --- --- --- --- 017594 00000 ------------ A 0.94 0.66 0.80 G 0.06 0.34 0.20 0000 --- --- --- --- 017628 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017947 00000 ------------ G 0.50 0.55 0.52 C 0.50 0.45 0.48 0000 --- --- --- --- 017965 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017979 00000 ------------ A 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000386: C 001138: T 003604: T 008630: T 010901: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 011924 C 0.27 0.15 0.21 G 0.17 0.11 0.14 T 0.56 0.74 0.65 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000190 00000 ------------ C 0.93 0.80 0.86 T 0.07 0.20 0.14 0000 --- --- --- --- 000247 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000260 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 000337 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000916 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001054 00000 ------------ A 0.57 0.74 0.65 G 0.43 0.26 0.35 0000 --- --- --- --- 001062 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001175 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001178 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001262 00000 ------------ G 0.83 0.97 0.89 A 0.17 0.03 0.11 0000 --- --- --- --- 001277 00000 ------------ - 0.89 1.00 0.94 + 0.11 0.00 0.06 0000 --- --- --- --- 001399 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001419 00000 ------------ G 0.83 0.69 0.77 T 0.17 0.31 0.23 0000 --- --- --- --- 001449 00000 ------------ G 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 001474 00000 ------------ G 0.83 0.72 0.78 C 0.17 0.28 0.22 0000 --- --- --- --- 001505 00000 ------------ G 0.89 0.69 0.80 C 0.11 0.31 0.20 0000 --- --- --- --- 001661 00000 ------------ T 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 001999 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 002120 00000 ------------ T 0.80 0.96 0.88 C 0.20 0.04 0.12 0000 --- --- --- --- 002174 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002192 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002221 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002252 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 002307 00000 ------------ C 0.58 0.46 0.51 T 0.42 0.54 0.49 0000 --- --- --- --- 002342 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002397 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 002567 00000 ------------ C 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 002646 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002690 00000 ------------ A 0.63 0.65 0.64 G 0.37 0.35 0.36 0000 --- --- --- --- 002704 00000 ------------ A 0.72 0.63 0.67 G 0.28 0.37 0.33 0000 --- --- --- --- 002711 00000 ------------ - 0.33 0.52 0.42 + 0.67 0.48 0.58 0000 --- --- --- --- 002780 00000 ------------ C 0.76 0.89 0.82 T 0.24 0.11 0.18 0000 --- --- --- --- 002838 00000 ------------ G 0.76 1.00 0.88 C 0.24 0.00 0.12 0000 --- --- --- --- 002853 00000 ------------ C 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 002873 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 002895 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002922 00000 ------------ T 0.74 0.65 0.70 C 0.26 0.35 0.30 0000 --- --- --- --- 002941 00000 ------------ G 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 003045 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 003051 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 003190 00000 ------------ C 0.72 0.65 0.68 A 0.28 0.35 0.32 0000 --- --- --- --- 003223 00000 ------------ G 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 003357 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003367 00000 ------------ G 0.65 0.63 0.64 A 0.35 0.37 0.36 0000 --- --- --- --- 003396 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003403 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003408 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003503 00000 ------------ T 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 003534 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 003678 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 003847 00271 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0090 GAC CAC ASP(D) HIS(H) 003888 00312 NON-SYN C 0.94 1.00 0.97 G 0.06 0.00 0.03 0103 AAC AAG ASN(N) LYS(K) 003924 00000 ------------ C 0.81 0.76 0.79 T 0.19 0.24 0.21 0000 --- --- --- --- 004093 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004312 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004733 00617 NON-SYN G 0.94 1.00 0.97 A 0.06 0.00 0.03 0205 CGG CAG ARG(R) GLN(Q) 004897 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 004898 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004962 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005081 00762 SYNON C 0.65 0.76 0.71 T 0.35 0.24 0.29 0253 TTC TTT PHE(F) PHE(F) 005280 00000 ------------ C 0.35 0.74 0.54 T 0.65 0.26 0.46 0000 --- --- --- --- 005331 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005358 00000 ------------ A 0.35 0.74 0.54 G 0.65 0.26 0.46 0000 --- --- --- --- 005408 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 005424 00000 ------------ G 0.52 0.76 0.64 A 0.48 0.24 0.36 0000 --- --- --- --- 005436 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005598 00000 ------------ A 0.74 0.36 0.56 G 0.26 0.64 0.44 0000 --- --- --- --- 005599 00000 ------------ A 0.74 0.33 0.55 C 0.26 0.67 0.45 0000 --- --- --- --- 005641 00000 ------------ A 0.74 0.34 0.54 G 0.26 0.66 0.46 0000 --- --- --- --- 005994 00000 ------------ C 0.93 0.87 0.90 T 0.07 0.13 0.10 0000 --- --- --- --- 006286 00000 ------------ C 0.96 0.97 0.96 T 0.04 0.03 0.04 0000 --- --- --- --- 006364 00000 ------------ G 0.63 0.37 0.51 A 0.37 0.63 0.49 0000 --- --- --- --- 006373 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 006686 00000 ------------ C 0.75 0.39 0.57 T 0.25 0.61 0.43 0000 --- --- --- --- 006968 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 007249 00000 ------------ G 0.70 0.38 0.55 A 0.30 0.62 0.45 0000 --- --- --- --- 007270 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007283 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007470 01047 SYNON C 0.94 1.00 0.97 A 0.06 0.00 0.03 0348 CGC CGA ARG(R) ARG(R) 007682 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007718 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 007784 00000 ------------ C 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 007785 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 008084 00000 ------------ A 0.70 1.00 0.84 G 0.30 0.00 0.16 0000 --- --- --- --- 008141 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 008436 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 008476 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 008498 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 008942 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 009002 00000 ------------ G 0.67 0.40 0.55 C 0.33 0.60 0.45 0000 --- --- --- --- 009057 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009080 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 009420 00000 ------------ T 0.89 0.88 0.88 A 0.11 0.12 0.12 0000 --- --- --- --- 009429 00000 ------------ C 0.89 0.87 0.88 G 0.11 0.13 0.12 0000 --- --- --- --- 009461 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 009485 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009809 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 010209 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010400 01458 SYNON A 1.00 0.78 0.89 G 0.00 0.22 0.11 0485 ACA ACG THR(T) THR(T) 010893 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011228 00000 ------------ G 0.63 0.60 0.62 A 0.37 0.40 0.38 0000 --- --- --- --- 011238 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011256 00000 ------------ C 0.63 0.60 0.62 T 0.37 0.40 0.38 0000 --- --- --- --- 011340 01695 SYNON C 0.91 1.00 0.95 T 0.09 0.00 0.05 0564 CCC CCT PRO(P) PRO(P) 011507 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011807 02053 3' UTR T 0.78 0.70 0.74 C 0.22 0.30 0.26 0000 --- --- --- --- 012033 02279 3' UTR C 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 012056 02302 3' UTR - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 012114 02360 3' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012286 02532 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012530 00000 ------------ A 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 012632 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012756 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 012799 00000 ------------ A 0.84 0.97 0.90 T 0.16 0.03 0.10 0000 --- --- --- --- 013266 00000 ------------ C 0.82 0.88 0.85 T 0.18 0.12 0.15 0000 --- --- --- --- 013394 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000337: AAAG 001277: TG 002252: AA 002711: GA 012056: GG 012114: GTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000589 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 000660 00000 ------------ T 0.85 0.89 0.87 G 0.15 0.11 0.13 0000 --- --- --- --- 000782 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000983 00000 ------------ A 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 002050 00051 5' UTR C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 002161 00000 ------------ A 0.85 0.26 0.58 C 0.15 0.74 0.42 0000 --- --- --- --- 002556 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 002657 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 002680 00000 ------------ - 0.17 0.02 0.09 + 0.83 0.98 0.91 0000 --- --- --- --- 002689 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002759 00000 ------------ G 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 002787 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 002821 00000 ------------ - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 002840 00000 ------------ A 0.54 0.89 0.71 C 0.46 0.11 0.29 0000 --- --- --- --- 002914 00000 ------------ A 0.85 0.27 0.58 G 0.15 0.73 0.42 0000 --- --- --- --- 003050 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 003129 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003254 00000 ------------ A 0.59 0.76 0.68 G 0.41 0.24 0.32 0000 --- --- --- --- 003276 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 003307 00000 ------------ T 0.98 0.89 0.93 C 0.02 0.11 0.07 0000 --- --- --- --- 003447 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 003517 00000 ------------ A 0.82 0.98 0.90 G 0.18 0.02 0.10 0000 --- --- --- --- 003679 00000 ------------ T 0.98 0.89 0.94 C 0.02 0.11 0.06 0000 --- --- --- --- 003966 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003989 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004108 00000 ------------ C 0.80 0.32 0.56 G 0.20 0.68 0.44 0000 --- --- --- --- 004431 00000 ------------ A 0.84 0.32 0.58 T 0.16 0.68 0.42 0000 --- --- --- --- 004513 00000 ------------ A 0.80 0.76 0.78 T 0.20 0.24 0.22 0000 --- --- --- --- 004843 00000 ------------ C 0.77 0.98 0.87 T 0.23 0.02 0.13 0000 --- --- --- --- 004965 00000 ------------ G 0.77 0.98 0.87 A 0.23 0.02 0.13 0000 --- --- --- --- 005024 00000 ------------ C 0.77 0.98 0.87 T 0.23 0.02 0.13 0000 --- --- --- --- 005404 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005413 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005422 00000 ------------ - 0.96 0.89 0.92 + 0.04 0.11 0.08 0000 --- --- --- --- 005562 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 005580 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 006056 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006067 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 006226 00000 ------------ T 0.61 0.86 0.74 C 0.39 0.14 0.26 0000 --- --- --- --- 006315 00000 ------------ A 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 006511 00000 ------------ G 0.83 0.74 0.79 A 0.17 0.26 0.21 0000 --- --- --- --- 006601 00000 ------------ G 0.98 0.52 0.76 A 0.02 0.48 0.24 0000 --- --- --- --- 006643 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006689 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 006792 00000 ------------ A 0.61 0.50 0.55 C 0.39 0.50 0.45 0000 --- --- --- --- 007017 00000 ------------ C 0.81 0.98 0.89 T 0.19 0.02 0.11 0000 --- --- --- --- 007197 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007476 00000 ------------ A 0.64 0.87 0.76 G 0.36 0.13 0.24 0000 --- --- --- --- 007704 00000 ------------ C 0.63 0.87 0.75 T 0.37 0.13 0.25 0000 --- --- --- --- 007736 00000 ------------ C 0.93 0.52 0.73 T 0.07 0.48 0.27 0000 --- --- --- --- 007814 00000 ------------ C 0.83 0.74 0.78 T 0.17 0.26 0.22 0000 --- --- --- --- 009074 00000 ------------ G 0.53 0.55 0.54 A 0.47 0.45 0.46 0000 --- --- --- --- 009151 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 009276 00000 ------------ G 0.83 0.39 0.62 A 0.17 0.61 0.38 0000 --- --- --- --- 009635 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009788 00000 ------------ A 0.96 0.91 0.93 G 0.04 0.09 0.07 0000 --- --- --- --- 010214 00000 ------------ A 0.81 0.63 0.72 G 0.19 0.37 0.28 0000 --- --- --- --- 010312 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010325 00000 ------------ G 0.96 0.89 0.93 C 0.04 0.11 0.07 0000 --- --- --- --- 010356 00000 ------------ G 0.48 0.57 0.52 A 0.52 0.43 0.48 0000 --- --- --- --- 010404 00000 ------------ T 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 010644 00000 ------------ C 0.58 0.57 0.57 A 0.42 0.43 0.43 0000 --- --- --- --- 010737 00000 ------------ T 0.85 0.76 0.80 C 0.15 0.24 0.20 0000 --- --- --- --- 011024 00000 ------------ C 1.00 0.88 0.94 T 0.00 0.12 0.06 0000 --- --- --- --- 011188 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011237 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011303 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 011441 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011469 00000 ------------ C 0.96 0.88 0.92 A 0.04 0.12 0.08 0000 --- --- --- --- 011863 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011882 00000 ------------ T 0.48 0.59 0.53 C 0.52 0.41 0.47 0000 --- --- --- --- 011889 00000 ------------ A 0.48 0.59 0.53 T 0.52 0.41 0.47 0000 --- --- --- --- 011916 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 012077 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 012087 00000 ------------ A 0.96 0.89 0.92 T 0.04 0.11 0.08 0000 --- --- --- --- 012113 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012290 00000 ------------ T 0.43 0.59 0.51 C 0.57 0.41 0.49 0000 --- --- --- --- 012291 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012454 00000 ------------ T 0.46 0.57 0.51 C 0.54 0.42 0.49 0000 --- --- --- --- 012504 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012565 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012585 00000 ------------ C 0.46 0.57 0.51 T 0.54 0.42 0.49 0000 --- --- --- --- 012703 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012879 00000 ------------ G 0.48 0.57 0.52 A 0.52 0.42 0.48 0000 --- --- --- --- 013025 00000 ------------ - 0.02 0.35 0.17 + 0.98 0.65 0.83 0000 --- --- --- --- 013106 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013151 00000 ------------ G 0.98 0.68 0.84 A 0.02 0.32 0.16 0000 --- --- --- --- 013209 00000 ------------ A 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 013405 00000 ------------ C 0.57 0.42 0.50 T 0.43 0.57 0.50 0000 --- --- --- --- 013474 00000 ------------ G 0.45 0.57 0.51 C 0.55 0.42 0.49 0000 --- --- --- --- 013625 00000 ------------ T 0.45 0.57 0.51 A 0.55 0.42 0.49 0000 --- --- --- --- 013798 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 013892 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014076 00000 ------------ G 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 014345 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 014550 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014737 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015275 00000 ------------ T 0.81 0.98 0.89 C 0.19 0.02 0.11 0000 --- --- --- --- 015285 00000 ------------ T 0.58 0.57 0.58 C 0.42 0.43 0.42 0000 --- --- --- --- 015678 00000 ------------ G 0.60 0.55 0.58 A 0.40 0.45 0.42 0000 --- --- --- --- 015730 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015796 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015908 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 016324 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 016589 00000 ------------ C 0.62 0.54 0.59 T 0.38 0.46 0.41 0000 --- --- --- --- 016619 00000 ------------ G 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 016630 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 016634 00000 ------------ G 0.62 0.67 0.65 T 0.38 0.33 0.35 0000 --- --- --- --- 016647 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 016852 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017120 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017706 00000 ------------ T 0.96 0.89 0.93 G 0.04 0.11 0.07 0000 --- --- --- --- 017813 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 017971 00000 ------------ G 0.96 0.89 0.92 A 0.04 0.11 0.08 0000 --- --- --- --- 017979 00000 ------------ C 0.60 0.57 0.59 A 0.40 0.43 0.41 0000 --- --- --- --- 018659 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018670 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018777 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 018881 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019242 00000 ------------ A 0.98 0.76 0.88 G 0.02 0.24 0.12 0000 --- --- --- --- 019368 00000 ------------ G 0.88 0.76 0.82 C 0.12 0.24 0.18 0000 --- --- --- --- 019529 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019857 00000 ------------ T 0.98 0.70 0.84 C 0.02 0.30 0.16 0000 --- --- --- --- 019959 00000 ------------ G 0.92 0.68 0.80 T 0.08 0.32 0.20 0000 --- --- --- --- 020158 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 020176 00000 ------------ G 0.75 0.80 0.77 T 0.25 0.20 0.23 0000 --- --- --- --- 020437 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020721 00000 ------------ - 0.58 0.46 0.52 + 0.42 0.54 0.48 0000 --- --- --- --- 020795 00000 ------------ G 0.74 1.00 0.86 A 0.26 0.00 0.14 0000 --- --- --- --- 021023 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 021030 00000 ------------ - 0.04 0.11 0.07 + 0.96 0.89 0.93 0000 --- --- --- --- 021112 00000 ------------ A 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 021406 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021454 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021684 00000 ------------ C 0.67 0.59 0.63 T 0.33 0.41 0.37 0000 --- --- --- --- 021875 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021927 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022611 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 022634 00000 ------------ G 0.98 0.70 0.84 C 0.02 0.30 0.16 0000 --- --- --- --- 022666 00000 ------------ C 0.56 0.78 0.67 T 0.44 0.22 0.33 0000 --- --- --- --- 022744 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 022996 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023125 00000 ------------ G 0.95 0.93 0.94 A 0.05 0.07 0.06 0000 --- --- --- --- 023148 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023331 00000 ------------ G 0.95 0.57 0.75 T 0.05 0.43 0.25 0000 --- --- --- --- 023366 00000 ------------ A 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 023489 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 023504 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 023607 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 023742 00000 ------------ C 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 023745 00000 ------------ G 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 024040 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024265* 024326 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024364 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 024542 00000 ------------ C 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 024606 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 024649 00000 ------------ C 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 024703 00000 ------------ T 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 024741 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 024851 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024897 00000 ------------ C 0.46 0.54 0.50 A 0.54 0.46 0.50 0000 --- --- --- --- 025184 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025317 00000 ------------ - 0.77 1.00 0.88 + 0.23 0.00 0.12 0000 --- --- --- --- 025462 00000 ------------ C 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 025634 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 025757 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 025758 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 025785 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 025858 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 025871 00000 ------------ A 0.98 0.70 0.84 T 0.02 0.30 0.16 0000 --- --- --- --- 025882 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 025953 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 026357 00000 ------------ A 1.00 0.87 0.94 C 0.00 0.13 0.06 0000 --- --- --- --- 026736 00000 ------------ A 0.78 0.85 0.81 G 0.23 0.15 0.19 0000 --- --- --- --- 026830 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 026982 00000 ------------ A 0.82 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 027010 00000 ------------ G 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 027052 00000 ------------ C 1.00 0.70 0.85 A 0.00 0.30 0.15 0000 --- --- --- --- 027568 00000 ------------ T 0.98 0.65 0.83 C 0.02 0.35 0.17 0000 --- --- --- --- 027690 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 028107 00000 ------------ G 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 028226 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 028399 00000 ------------ A 0.73 0.95 0.84 G 0.27 0.05 0.16 0000 --- --- --- --- 028531 00000 ------------ A 0.73 0.95 0.84 G 0.27 0.05 0.16 0000 --- --- --- --- 028733 00000 ------------ G 0.64 0.57 0.60 T 0.36 0.43 0.40 0000 --- --- --- --- 029087 00000 ------------ A 0.75 0.96 0.85 G 0.25 0.04 0.15 0000 --- --- --- --- 029443 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029500 00000 ------------ G 0.85 0.98 0.92 A 0.15 0.02 0.08 0000 --- --- --- --- 029668 00000 ------------ G 0.70 0.95 0.83 A 0.30 0.05 0.17 0000 --- --- --- --- 029912 00000 ------------ T 0.54 0.48 0.51 C 0.46 0.52 0.49 0000 --- --- --- --- 029963 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029994 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.22 0000 --- --- --- --- 030104 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 030163 00000 ------------ T 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 030231 00000 ------------ A 0.92 0.52 0.73 G 0.08 0.48 0.27 0000 --- --- --- --- 030816 00779 3' UTR A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 031137 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031151 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 031310 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031454 00000 ------------ T 0.98 0.65 0.82 G 0.02 0.35 0.18 0000 --- --- --- --- 031501 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031504 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 031894 00000 ------------ G 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 031961 00000 ------------ G 0.80 0.98 0.89 A 0.20 0.02 0.11 0000 --- --- --- --- 032005 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 032259 00000 ------------ G 0.96 0.91 0.93 C 0.04 0.09 0.07 0000 --- --- --- --- 032371 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 032729 00000 ------------ G 0.91 0.70 0.81 A 0.09 0.30 0.19 0000 --- --- --- --- 032739 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002657: T 002680: T 002821: AAC 005422: AC 013025: C 020721: AGAGAAAGCTGAAG 021030: A 025317: ACCT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 024265 A 0.23 0.00 0.12 C 0.06 0.11 0.09 G 0.71 0.89 0.80 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000292 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000310 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000417 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000422 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000450 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 000453 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000526 00000 ------------ C 0.63 0.45 0.54 G 0.37 0.55 0.46 0000 --- --- --- --- 000677 00124 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000757 00204 5' UTR G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 000773 00220 5' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000831 00278 5' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000938 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002194 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 002196 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 002198 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 002283 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002393 00000 ------------ G 0.60 0.50 0.55 T 0.40 0.50 0.45 0000 --- --- --- --- 002540 00000 ------------ G 0.83 0.50 0.67 A 0.17 0.50 0.33 0000 --- --- --- --- 003185 00000 ------------ T 0.88 0.76 0.81 G 0.12 0.24 0.19 0000 --- --- --- --- 004422 00000 ------------ C 0.61 0.48 0.54 G 0.39 0.52 0.46 0000 --- --- --- --- 004545 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004977 00615 NON-SYN G 0.70 0.52 0.61 T 0.30 0.48 0.39 0108 GCT TCT ALA(A) SER(S) 005009 00647 SYNON C 0.89 1.00 0.94 T 0.11 0.00 0.06 0118 TCC TCT SER(S) SER(S) 005084 00722 SYNON T 0.61 0.50 0.56 C 0.39 0.50 0.44 0143 CGT CGC ARG(R) ARG(R) 005125 00000 ------------ - 0.02 0.02 0.02 + 0.98 0.98 0.98 0000 --- --- --- --- 005132 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005264 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005394 00825 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0178 GCA ACA ALA(A) THR(T) 005530 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005780 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 006179 00000 ------------ T 0.65 0.98 0.81 A 0.35 0.02 0.19 0000 --- --- --- --- 006262 00000 ------------ G 0.97 0.71 0.83 C 0.03 0.29 0.17 0000 --- --- --- --- 006361 00000 ------------ G 1.00 0.96 0.97 A 0.00 0.04 0.03 0000 --- --- --- --- 006703 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 006897 00000 ------------ A 0.82 0.57 0.70 C 0.17 0.43 0.30 0000 --- --- --- --- 007048 00000 ------------ C 0.65 0.45 0.55 A 0.35 0.55 0.45 0000 --- --- --- --- 007202 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007284 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 007409 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007572 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007573 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007575 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007577 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008052 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008070 00000 ------------ G 1.00 0.79 0.90 C 0.00 0.21 0.10 0000 --- --- --- --- 008190 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 008923 00000 ------------ C 0.62 0.97 0.78 T 0.38 0.03 0.22 0000 --- --- --- --- 008938 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009042 00000 ------------ C 0.56 0.48 0.52 T 0.44 0.52 0.48 0000 --- --- --- --- 009261 00000 ------------ G 0.86 0.55 0.70 A 0.14 0.45 0.30 0000 --- --- --- --- 009317 00866 SYNON G 0.94 1.00 0.97 A 0.06 0.00 0.03 0191 CCG CCA PRO(P) PRO(P) 009435 00984 NON-SYN G 0.85 0.55 0.71 A 0.15 0.45 0.29 0231 GTC ATC VAL(V) ILE(I) 009437 00986 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0231 GTC GTT VAL(V) VAL(V) 009612 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009638 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009826 00000 ------------ C 0.56 0.48 0.52 T 0.44 0.52 0.48 0000 --- --- --- --- 009837 00000 ------------ G 0.56 0.48 0.52 C 0.44 0.52 0.48 0000 --- --- --- --- 009840 00000 ------------ T 0.56 0.48 0.52 C 0.44 0.52 0.48 0000 --- --- --- --- 009851 00000 ------------ C 0.56 0.48 0.52 A 0.44 0.52 0.48 0000 --- --- --- --- 009854 00000 ------------ T 0.56 0.48 0.52 G 0.44 0.52 0.48 0000 --- --- --- --- 009916 00000 ------------ C 0.50 0.65 0.57 G 0.50 0.35 0.43 0000 --- --- --- --- 010254 00000 ------------ T 0.93 0.98 0.95 C 0.07 0.02 0.05 0000 --- --- --- --- 010275 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010279 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 010284 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 010285 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 010305 00000 ------------ - 0.40 0.52 0.46 + 0.60 0.48 0.54 0000 --- --- --- --- 010335 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010854 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010875 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011151 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 011152 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011164 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011300 00000 ------------ T 0.85 0.52 0.70 C 0.15 0.48 0.30 0000 --- --- --- --- 011651 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011668 00000 ------------ C 0.55 0.48 0.51 G 0.45 0.52 0.49 0000 --- --- --- --- 011720 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011821 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011832 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012157 01213 NON-SYN A 0.94 1.00 0.97 G 0.06 0.00 0.03 0307 TAC TGC TYR(Y) CYS(C) 012218 01274 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0327 TCC TCT SER(S) SER(S) 012338 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012347 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 012593 01426 3' UTR C 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 012607 01440 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012632 01465 3' UTR T 0.79 0.54 0.67 C 0.21 0.46 0.33 0000 --- --- --- --- 012875 01708 3' UTR A 0.85 0.54 0.70 T 0.15 0.46 0.30 0000 --- --- --- --- 012877 01710 3' UTR T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013385 02218 3' UTR T 0.86 0.48 0.66 G 0.14 0.52 0.34 0000 --- --- --- --- 013537 02370 3' UTR T 0.76 0.54 0.65 C 0.24 0.46 0.35 0000 --- --- --- --- 013702 02535 3' UTR T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 013740 02573 3' UTR T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 014682 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014775 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014897 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014966 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 015309 00000 ------------ - 0.83 0.48 0.66 + 0.17 0.52 0.34 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000773: A 000831: G 005125: AG 005780: AGCCAGAAGCTTTGAGCAACATCCTTCAAGGCCGAC 010305: T 015309: TA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000310 00000 ------------ A 0.86 0.98 0.92 T 0.14 0.02 0.08 0000 --- --- --- --- 000321 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000673 00000 ------------ G 0.97 0.47 0.70 A 0.03 0.53 0.30 0000 --- --- --- --- 001302 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001324 00000 ------------ C 0.96 0.90 0.94 G 0.04 0.10 0.06 0000 --- --- --- --- 001696 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001729 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001732 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001805 00000 ------------ G 0.56 0.68 0.62 C 0.44 0.32 0.38 0000 --- --- --- --- 002247 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002388 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002445 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 002751* 002998 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003819 00372 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0047 CCC CCT PRO(P) PRO(P) 003946 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005141 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 005179 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005882 00588 SYNON T 1.00 0.66 0.83 C 0.00 0.34 0.17 0119 TTT TTC PHE(F) PHE(F) 006136 00000 ------------ C 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 006150 00000 ------------ T 0.67 0.93 0.80 C 0.33 0.07 0.20 0000 --- --- --- --- 006214 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006325 00788 NON-SYN A 0.65 0.93 0.79 G 0.35 0.07 0.21 0186 CAC CGC HIS(H) ARG(R) 006417 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 006731 00000 ------------ G 0.67 0.93 0.80 T 0.33 0.07 0.20 0000 --- --- --- --- 006826 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006994 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006995 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007013 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007060 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 007100 00000 ------------ T 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 007101 00000 ------------ C 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 007121 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007157 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007186 00000 ------------ G 0.69 0.93 0.82 A 0.31 0.07 0.18 0000 --- --- --- --- 007864 00000 ------------ C 0.82 0.98 0.90 G 0.18 0.02 0.10 0000 --- --- --- --- 008000 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008111 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 008112 00000 ------------ A 0.59 0.65 0.62 T 0.41 0.35 0.38 0000 --- --- --- --- 008279 00000 ------------ G 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 008333 00000 ------------ C 0.96 0.48 0.72 G 0.04 0.52 0.28 0000 --- --- --- --- 008376 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 008922 00000 ------------ G 0.75 0.97 0.88 A 0.25 0.03 0.12 0000 --- --- --- --- 009422 00000 ------------ C 0.96 0.52 0.74 T 0.04 0.48 0.26 0000 --- --- --- --- 009456 00000 ------------ G 0.64 0.61 0.62 A 0.36 0.39 0.38 0000 --- --- --- --- 009771 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009946 00000 ------------ C 0.96 0.48 0.72 T 0.04 0.52 0.28 0000 --- --- --- --- 010054 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010152 00000 ------------ G 0.55 0.60 0.58 C 0.45 0.40 0.42 0000 --- --- --- --- 010154 00000 ------------ G 0.75 0.91 0.82 A 0.25 0.09 0.18 0000 --- --- --- --- 010421 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 010580 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010619 00000 ------------ G 0.47 0.57 0.53 C 0.53 0.43 0.47 0000 --- --- --- --- 010654 00000 ------------ G 0.55 0.50 0.52 A 0.45 0.50 0.48 0000 --- --- --- --- 010782 00000 ------------ A 0.54 0.61 0.57 C 0.46 0.39 0.43 0000 --- --- --- --- 010787 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 011130 01054 NON-SYN C 0.83 0.98 0.90 G 0.17 0.02 0.10 0275 CAG GAG GLN(Q) GLU(E) 011386 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 011568 00000 ------------ G 0.55 0.90 0.72 A 0.45 0.10 0.28 0000 --- --- --- --- 011861 01342 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0371 CTG TTG LEU(L) LEU(L) 012106 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012591 00000 ------------ C 0.70 1.00 0.83 T 0.30 0.00 0.17 0000 --- --- --- --- 012603 00000 ------------ C 0.72 1.00 0.85 T 0.28 0.00 0.15 0000 --- --- --- --- 012726 00000 ------------ C 0.54 0.60 0.57 T 0.46 0.40 0.43 0000 --- --- --- --- 012760 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 012768 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012769 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 012806 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012937 00000 ------------ C 0.52 0.91 0.71 G 0.48 0.09 0.29 0000 --- --- --- --- 013084 00000 ------------ G 1.00 0.97 0.98 T 0.00 0.03 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 002751 C 0.77 0.72 0.74 G 0.08 0.00 0.04 T 0.15 0.28 0.21 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000092 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000157 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 000186 00000 ------------ G 0.57 0.72 0.65 C 0.43 0.28 0.35 0000 --- --- --- --- 000300 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000321 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000617 00000 ------------ A 0.88 0.80 0.84 G 0.12 0.20 0.16 0000 --- --- --- --- 000634 00000 ------------ - 0.89 0.80 0.84 + 0.11 0.20 0.16 0000 --- --- --- --- 000676 00000 ------------ C 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 000733 00000 ------------ T 0.83 0.83 0.83 C 0.17 0.17 0.17 0000 --- --- --- --- 000749 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 000795 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001013 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 001344 00002 5' UTR C 0.95 0.93 0.94 A 0.05 0.07 0.06 0000 --- --- --- --- 001447 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 001777 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 001918 00000 ------------ T 1.00 0.88 0.95 G 0.00 0.12 0.05 0000 --- --- --- --- 002098 00000 ------------ G 1.00 0.94 0.97 A 0.00 0.06 0.03 0000 --- --- --- --- 002255 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002257 00000 ------------ G 0.89 0.93 0.91 A 0.11 0.07 0.09 0000 --- --- --- --- 002505 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003124 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 003470 00000 ------------ T 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- 003634 00000 ------------ A 0.85 0.57 0.69 G 0.15 0.43 0.31 0000 --- --- --- --- 003690 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 003719 00000 ------------ C 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 003819 00000 ------------ A 0.97 0.93 0.95 G 0.03 0.07 0.05 0000 --- --- --- --- 003835 00000 ------------ T 0.97 0.95 0.96 G 0.03 0.05 0.04 0000 --- --- --- --- 003910 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004252 00000 ------------ A 0.75 0.91 0.83 G 0.25 0.09 0.17 0000 --- --- --- --- 004590 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 004709 00353 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0107 AGT AAT SER(S) ASN(N) 004886 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004891 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 004892 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 004900 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004922 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005011 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006623 00000 ------------ T 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 006781* 006804 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006861 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006900 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007183 00000 ------------ A 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 007307 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007333 00000 ------------ A 0.94 0.93 0.93 G 0.06 0.07 0.07 0000 --- --- --- --- 007381 00000 ------------ A 0.82 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 007394 00000 ------------ - 0.69 0.48 0.59 + 0.31 0.52 0.41 0000 --- --- --- --- 007395 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007668 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007673 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007677 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 007859 00000 ------------ A 0.57 0.72 0.65 G 0.43 0.28 0.35 0000 --- --- --- --- 007906 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007976 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 008234 00000 ------------ G 0.80 0.93 0.87 A 0.20 0.07 0.13 0000 --- --- --- --- 008267 00000 ------------ G 0.59 0.72 0.66 T 0.41 0.28 0.34 0000 --- --- --- --- 008415 00000 ------------ T 0.70 0.50 0.60 C 0.30 0.50 0.40 0000 --- --- --- --- 008609 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008640 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008749 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008772 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 008896 00000 ------------ T 0.89 0.54 0.72 G 0.11 0.46 0.28 0000 --- --- --- --- 009042 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 009061 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009572 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010059 00494 NON-SYN G 0.95 0.93 0.94 A 0.05 0.07 0.06 0154 CGT CAT ARG(R) HIS(H) 010075 00510 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0159 TCA TCG SER(S) SER(S) 010230 00000 ------------ T 0.91 0.57 0.74 C 0.09 0.43 0.26 0000 --- --- --- --- 010283 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 010979 00000 ------------ C 0.83 0.57 0.70 T 0.17 0.43 0.30 0000 --- --- --- --- 011029 00000 ------------ C 0.61 0.38 0.50 T 0.39 0.62 0.50 0000 --- --- --- --- 011251 00000 ------------ C 0.97 0.95 0.96 T 0.03 0.05 0.04 0000 --- --- --- --- 011303 00000 ------------ T 0.88 0.55 0.70 C 0.12 0.45 0.30 0000 --- --- --- --- 011335 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 011424 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011477 00000 ------------ C 0.35 0.65 0.50 A 0.65 0.35 0.50 0000 --- --- --- --- 011622 00000 ------------ A 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 011636 00000 ------------ T 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 011746 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 011789 00000 ------------ C 0.65 0.36 0.51 G 0.35 0.64 0.49 0000 --- --- --- --- 011820 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 011890 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011922 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012608 00000 ------------ T 0.37 0.64 0.51 C 0.63 0.36 0.49 0000 --- --- --- --- 012774 00000 ------------ T 0.37 0.64 0.51 G 0.63 0.36 0.49 0000 --- --- --- --- 012948 00000 ------------ T 0.37 0.65 0.52 C 0.63 0.35 0.48 0000 --- --- --- --- 013060 00000 ------------ A 0.37 0.63 0.51 G 0.63 0.37 0.49 0000 --- --- --- --- 013745 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 013755 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013774 00000 ------------ T 0.91 0.80 0.86 C 0.09 0.20 0.14 0000 --- --- --- --- 014206 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014232 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014383 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014413 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 014502 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014512 00000 ------------ G 0.50 0.70 0.60 A 0.50 0.30 0.40 0000 --- --- --- --- 014544 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014636 00000 ------------ G 0.86 0.57 0.70 A 0.14 0.43 0.30 0000 --- --- --- --- 014657 00000 ------------ C 0.43 0.63 0.53 T 0.57 0.37 0.47 0000 --- --- --- --- 014705 00000 ------------ C 0.95 0.91 0.93 A 0.05 0.09 0.07 0000 --- --- --- --- 014905 00000 ------------ C 0.81 0.78 0.80 T 0.19 0.22 0.20 0000 --- --- --- --- 015320 00000 ------------ C 0.95 0.76 0.85 T 0.05 0.24 0.15 0000 --- --- --- --- 015741 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015985 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 016121 00829 NON-SYN G 0.50 0.74 0.61 T 0.50 0.26 0.39 0266 GTA TTA VAL(V) LEU(L) 016350 00000 ------------ C 0.90 0.81 0.86 T 0.10 0.19 0.14 0000 --- --- --- --- 016411 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016412 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016422 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016475 00000 ------------ G 0.75 0.57 0.66 C 0.25 0.43 0.34 0000 --- --- --- --- 016552 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016864 00000 ------------ G 0.77 0.57 0.67 T 0.23 0.43 0.33 0000 --- --- --- --- 017002 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 017193 00000 ------------ T 0.89 0.80 0.85 G 0.11 0.20 0.15 0000 --- --- --- --- 017318 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 017338 00000 ------------ C 0.75 0.55 0.65 A 0.25 0.45 0.35 0000 --- --- --- --- 017500 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 017600 00000 ------------ C 0.73 0.55 0.64 G 0.27 0.45 0.36 0000 --- --- --- --- 018129 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 018224 00000 ------------ G 0.65 0.89 0.77 T 0.35 0.11 0.23 0000 --- --- --- --- 018251 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 018345 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 018355 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 018482 00000 ------------ T 0.82 0.55 0.68 C 0.18 0.45 0.32 0000 --- --- --- --- 018485 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018532 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 018539 00000 ------------ - 0.16 0.00 0.07 + 0.84 1.00 0.93 0000 --- --- --- --- 018593 01037 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0335 TGG TCG TRP(W) SER(S) 018648 01092 3' UTR T 0.82 0.52 0.67 C 0.18 0.48 0.33 0000 --- --- --- --- 018689 01133 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018904 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 019027 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 019196 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019394 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 019675 00000 ------------ - 0.57 0.57 0.57 + 0.43 0.43 0.43 0000 --- --- --- --- 019750 00000 ------------ G 0.90 0.86 0.88 A 0.10 0.14 0.12 0000 --- --- --- --- 019789 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019803 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019936 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020019 00000 ------------ - 0.69 0.57 0.63 + 0.31 0.43 0.37 0000 --- --- --- --- 020022 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020112 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 020157 00000 ------------ T 0.90 0.83 0.86 G 0.10 0.17 0.14 0000 --- --- --- --- 020184 00000 ------------ A 0.71 0.57 0.64 T 0.29 0.43 0.36 0000 --- --- --- --- 020246 00000 ------------ T 0.97 0.88 0.92 C 0.03 0.12 0.08 0000 --- --- --- --- 020252 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000634: T 004590: T 007307: G 007394: T 011335: T 011746: A 018539: T 019675: A 020019: C The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 006781 A 0.04 0.00 0.02 C 0.76 0.80 0.78 G 0.20 0.20 0.20 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000118 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 000444 00000 ------------ A 0.76 0.89 0.83 T 0.24 0.11 0.17 0000 --- --- --- --- 000695 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001041 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 001059 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 001174 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001237 00000 ------------ C 0.96 0.54 0.76 G 0.04 0.46 0.24 0000 --- --- --- --- 001239 00000 ------------ C 0.73 0.59 0.66 T 0.27 0.41 0.34 0000 --- --- --- --- 001615 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002153 00191 NON-SYN C 1.00 0.95 0.98 T 0.00 0.05 0.02 0045 GCG GTG ALA(A) VAL(V) 003280 00000 ------------ C 0.70 0.91 0.80 G 0.30 0.09 0.20 0000 --- --- --- --- 003544 00000 ------------ T 0.81 0.22 0.52 C 0.19 0.78 0.48 0000 --- --- --- --- 003545 00000 ------------ A 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 003587 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 003863 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003909 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003940 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 003961 00000 ------------ - 0.31 0.54 0.43 + 0.69 0.46 0.57 0000 --- --- --- --- 004180 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 004309 00000 ------------ C 1.00 0.95 0.97 T 0.00 0.05 0.03 0000 --- --- --- --- 004612 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 004873 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005082 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005094 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 005294 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 005366 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005460 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 005475 00000 ------------ - 0.31 0.07 0.19 + 0.69 0.93 0.81 0000 --- --- --- --- 005485 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005612 00000 ------------ A 0.47 0.93 0.73 G 0.53 0.07 0.27 0000 --- --- --- --- 005618 00000 ------------ G 0.47 0.96 0.74 A 0.53 0.04 0.26 0000 --- --- --- --- 005623 00000 ------------ G 1.00 0.33 0.63 A 0.00 0.67 0.37 0000 --- --- --- --- 005633 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 005812 00000 ------------ G 0.97 0.39 0.65 A 0.03 0.61 0.35 0000 --- --- --- --- 005862 00000 ------------ T 0.50 0.85 0.69 G 0.50 0.15 0.31 0000 --- --- --- --- 006034* 006166 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006343 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006502 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006561 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006640 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006671 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006702 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006718 00000 ------------ A 0.40 0.86 0.62 G 0.60 0.14 0.38 0000 --- --- --- --- 006924 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006946 00000 ------------ C 0.74 0.93 0.83 T 0.26 0.07 0.17 0000 --- --- --- --- 006984 00000 ------------ A 0.41 0.88 0.64 G 0.59 0.12 0.36 0000 --- --- --- --- 007994 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008145 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008178 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008197 00000 ------------ C 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 008270 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008359 00000 ------------ C 0.70 0.95 0.82 T 0.30 0.05 0.18 0000 --- --- --- --- 008903 00000 ------------ C 0.33 0.95 0.65 T 0.68 0.05 0.35 0000 --- --- --- --- 009206 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 009281 00000 ------------ C 0.40 0.95 0.67 T 0.60 0.05 0.33 0000 --- --- --- --- 009497 00000 ------------ C 0.79 0.23 0.52 T 0.21 0.77 0.48 0000 --- --- --- --- 009622 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009647 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009665 00000 ------------ A 0.32 0.80 0.56 C 0.68 0.20 0.44 0000 --- --- --- --- 009979 00000 ------------ T 0.46 0.93 0.69 A 0.54 0.07 0.31 0000 --- --- --- --- 010059* 010389 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011490 00000 ------------ G 0.81 0.95 0.87 A 0.19 0.05 0.13 0000 --- --- --- --- 011818 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012247 00513 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0152 TGC TGT CYS(C) CYS(C) 012285 00551 NON-SYN G 1.00 0.95 0.98 A 0.00 0.05 0.02 0165 GGT GAT GLY(G) ASP(D) 012384 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012489 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 012621 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012632 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012773 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012913 00000 ------------ - 0.17 0.20 0.18 + 0.83 0.80 0.82 0000 --- --- --- --- 013030 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013252 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013805 00933 3' UTR - 0.58 0.93 0.76 + 0.42 0.07 0.24 0000 --- --- --- --- 014106 01234 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014145 01273 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014256 01384 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014269 01397 3' UTR T 0.29 0.93 0.61 C 0.71 0.07 0.39 0000 --- --- --- --- 014322 01450 3' UTR C 0.98 0.30 0.65 G 0.02 0.70 0.35 0000 --- --- --- --- 014389 01517 3' UTR A 0.58 0.93 0.76 G 0.42 0.07 0.24 0000 --- --- --- --- 014645 01773 3' UTR C 0.66 0.93 0.80 T 0.34 0.07 0.20 0000 --- --- --- --- 014805 01933 3' UTR A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 015078 02206 3' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016173 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016352 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016555 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016693 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 017287 00000 ------------ C 0.37 0.93 0.65 T 0.63 0.07 0.35 0000 --- --- --- --- 017316 00000 ------------ - 0.88 1.00 0.94 + 0.12 0.00 0.06 0000 --- --- --- --- 017453 00000 ------------ C 0.33 0.93 0.63 G 0.67 0.07 0.37 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001041: C 003961: C 005082: G 005475: C 009622: G 009647: AGAATTG 012773: G 012913: G 013805: AGGGG 016555: GAAG 017316: TGGCATCTGGAGAAGCCTGTTCATTCCA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 010059 C 0.44 0.93 0.67 G 0.54 0.07 0.32 T 0.02 0.00 0.01 006034 A 0.03 0.00 0.01 G 0.79 0.89 0.85 T 0.18 0.11 0.14 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000042 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 000063 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000450 00000 ------------ G 1.00 0.84 0.93 A 0.00 0.16 0.07 0000 --- --- --- --- 000834 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000991 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 001443 00000 ------------ G 0.96 0.76 0.86 A 0.04 0.24 0.14 0000 --- --- --- --- 002395 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002487 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002578 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002823 00012 5' UTR A 0.56 0.65 0.61 G 0.44 0.35 0.39 0000 --- --- --- --- 002849 00038 5' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002855 00044 5' UTR C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002978 00167 SYNON C 0.83 0.72 0.78 G 0.17 0.28 0.22 0035 CTC CTG LEU(L) LEU(L) 003096 00000 ------------ C 0.79 0.72 0.76 G 0.21 0.28 0.24 0000 --- --- --- --- 003205 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 003835 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003916 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004234 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004272 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004686 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005541 00000 ------------ G 0.53 0.76 0.67 A 0.47 0.24 0.33 0000 --- --- --- --- 005644 00000 ------------ C 0.57 0.62 0.60 T 0.43 0.38 0.40 0000 --- --- --- --- 006326 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006402 00000 ------------ C 0.92 0.70 0.82 G 0.08 0.30 0.18 0000 --- --- --- --- 006530 00189 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0043 GTG ATG VAL(V) MET(M) 006810 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007242 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007296 00000 ------------ C 0.98 0.83 0.90 T 0.02 0.17 0.10 0000 --- --- --- --- 007371 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 007416 00000 ------------ G 0.79 0.65 0.72 T 0.21 0.35 0.28 0000 --- --- --- --- 007450 00452 SYNON T 0.83 0.65 0.74 C 0.17 0.35 0.26 0130 TTT TTC PHE(F) PHE(F) 007594 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007705 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007771 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008130 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 008576 01156 3' UTR G 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 009437 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 009786 00000 ------------ T 0.96 0.85 0.90 C 0.04 0.15 0.10 0000 --- --- --- --- 010006 00000 ------------ G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 010092 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010188 00000 ------------ C 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 010574 00000 ------------ G 0.70 0.82 0.76 A 0.30 0.18 0.24 0000 --- --- --- --- 010665 00000 ------------ G 0.79 0.98 0.88 T 0.21 0.02 0.12 0000 --- --- --- --- 011107 00000 ------------ C 0.88 0.97 0.92 T 0.12 0.03 0.08 0000 --- --- --- --- 011142 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011143 00000 ------------ G 0.79 0.97 0.87 A 0.21 0.03 0.13 0000 --- --- --- --- 011252 00000 ------------ - 0.20 0.45 0.33 + 0.80 0.55 0.67 0000 --- --- --- --- 011271 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011344 00000 ------------ C 1.00 0.83 0.92 T 0.00 0.17 0.08 0000 --- --- --- --- 011406 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 013121 00000 ------------ G 0.91 0.80 0.86 T 0.09 0.20 0.14 0000 --- --- --- --- 013159 00000 ------------ C 0.88 0.50 0.70 A 0.12 0.50 0.30 0000 --- --- --- --- 013263 00000 ------------ C 0.93 0.80 0.86 G 0.07 0.20 0.14 0000 --- --- --- --- 013483 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013527 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013590 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013636 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013644 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 013681 00000 ------------ A 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011252: G 011406: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000088 00000 ------------ G 0.98 0.97 0.98 T 0.02 0.03 0.02 0000 --- --- --- --- 000094 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 000275 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000338 00000 ------------ C 0.67 0.78 0.72 T 0.33 0.23 0.28 0000 --- --- --- --- 000734 00000 ------------ C 0.54 0.75 0.63 T 0.46 0.25 0.37 0000 --- --- --- --- 000747 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000762 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000799 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 001225 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 001354 00000 ------------ T 0.37 0.78 0.58 C 0.63 0.22 0.42 0000 --- --- --- --- 001376 00000 ------------ C 0.57 1.00 0.78 T 0.43 0.00 0.22 0000 --- --- --- --- 001389 00000 ------------ G 0.57 1.00 0.78 C 0.43 0.00 0.22 0000 --- --- --- --- 001440 00000 ------------ T 0.39 0.98 0.68 C 0.61 0.02 0.32 0000 --- --- --- --- 001613 00000 ------------ A 0.76 0.78 0.77 G 0.24 0.22 0.23 0000 --- --- --- --- 001968 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002015 00015 5' UTR C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 002142 00142 5' UTR A 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 002319 00319 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002469 00469 5' UTR T 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 002692 00692 NON-SYN G 1.00 0.90 0.96 C 0.00 0.10 0.04 0065 AAG AAC LYS(K) ASN(N) 002887 00887 SYNON G 0.85 0.98 0.91 C 0.15 0.02 0.09 0130 CTG CTC LEU(L) LEU(L) 003068 01068 NON-SYN G 0.83 0.98 0.90 C 0.17 0.02 0.10 0191 GGC CGC GLY(G) ARG(R) 003169 01169 SYNON T 0.81 1.00 0.90 C 0.19 0.00 0.10 0224 CAT CAC HIS(H) HIS(H) 003296 01296 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0267 AGC GGC SER(S) GLY(G) 003639 00000 ------------ G 1.00 0.90 0.96 A 0.00 0.10 0.04 0000 --- --- --- --- 003855 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004754 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 005091 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005165 00000 ------------ G 0.33 0.78 0.55 C 0.67 0.22 0.45 0000 --- --- --- --- 005167 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005509 00000 ------------ G 0.60 0.98 0.79 A 0.40 0.02 0.21 0000 --- --- --- --- 005613 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 005617 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005701 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 005921 00000 ------------ C 0.75 0.80 0.77 T 0.25 0.20 0.23 0000 --- --- --- --- 006027 00000 ------------ T 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 006079 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006091 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 006174 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006305 00000 ------------ T 0.33 0.79 0.53 C 0.67 0.21 0.47 0000 --- --- --- --- 006469 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006484 00000 ------------ G 0.62 0.98 0.80 T 0.38 0.02 0.20 0000 --- --- --- --- 006579 00000 ------------ A 0.35 0.76 0.55 G 0.65 0.24 0.45 0000 --- --- --- --- 006665 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006685 00000 ------------ A 0.61 0.98 0.79 G 0.39 0.02 0.21 0000 --- --- --- --- 006771 00000 ------------ C 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 006812 00000 ------------ C 0.61 0.98 0.79 G 0.39 0.02 0.21 0000 --- --- --- --- 006894 00000 ------------ T 0.61 0.98 0.79 C 0.39 0.02 0.21 0000 --- --- --- --- 007024 00000 ------------ C 0.60 0.97 0.79 G 0.40 0.03 0.21 0000 --- --- --- --- 007249 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007301 00000 ------------ C 0.87 0.80 0.83 T 0.13 0.20 0.17 0000 --- --- --- --- 007347 00000 ------------ C 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 007361 00000 ------------ A 0.37 0.77 0.57 G 0.63 0.23 0.43 0000 --- --- --- --- 007460 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007464 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 007498 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007668 00000 ------------ A 0.48 0.78 0.63 T 0.52 0.22 0.37 0000 --- --- --- --- 007969 00000 ------------ A 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 008008 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 008104 00000 ------------ - 0.52 0.22 0.37 + 0.48 0.78 0.63 0000 --- --- --- --- 008230 00000 ------------ T 0.48 0.78 0.63 C 0.52 0.22 0.37 0000 --- --- --- --- 008241 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008448 00000 ------------ G 0.48 0.78 0.63 A 0.52 0.22 0.37 0000 --- --- --- --- 008477 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008617 00000 ------------ G 0.33 0.78 0.55 C 0.67 0.22 0.45 0000 --- --- --- --- 008698 00000 ------------ A 0.33 0.78 0.55 G 0.67 0.22 0.45 0000 --- --- --- --- 008711 00000 ------------ T 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 008766 00000 ------------ C 0.48 0.78 0.63 T 0.52 0.22 0.37 0000 --- --- --- --- 009027 01588 NON-SYN G 0.92 0.80 0.86 A 0.08 0.20 0.14 0364 CGC CAC ARG(R) HIS(H) 009055 01616 SYNON G 0.42 0.79 0.58 A 0.58 0.21 0.42 0373 TCG TCA SER(S) SER(S) 009220 01781 3' UTR C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 009221 01782 3' UTR G 0.83 0.79 0.81 A 0.17 0.21 0.19 0000 --- --- --- --- 009272 01833 3' UTR G 0.48 0.79 0.62 A 0.52 0.21 0.38 0000 --- --- --- --- 009328 01889 3' UTR A 0.33 0.79 0.53 G 0.67 0.21 0.47 0000 --- --- --- --- 009333 01894 3' UTR G 0.48 0.79 0.62 A 0.52 0.21 0.38 0000 --- --- --- --- 009337 01898 3' UTR C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009498 02059 3' UTR T 0.83 0.81 0.82 A 0.17 0.19 0.18 0000 --- --- --- --- 009680 02241 3' UTR - 0.52 0.78 0.65 + 0.48 0.22 0.35 0000 --- --- --- --- 009866 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009894 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009895 00000 ------------ - 0.33 0.78 0.55 + 0.67 0.22 0.45 0000 --- --- --- --- 010630 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 010872 00000 ------------ A 0.71 0.89 0.79 T 0.29 0.11 0.21 0000 --- --- --- --- 011087 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 011208 00000 ------------ G 0.77 0.76 0.77 A 0.23 0.24 0.23 0000 --- --- --- --- 011266 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011280 00000 ------------ C 0.79 0.74 0.77 T 0.21 0.26 0.23 0000 --- --- --- --- 011487 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006091: CCCCTGTCCCCG 006665: A 008104: T 009680: GTT 009895: AG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000200 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000409 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000605 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000690 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000939 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 001063 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001553 00000 ------------ G 0.95 0.52 0.73 T 0.05 0.48 0.27 0000 --- --- --- --- 001769 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001882 00000 ------------ C 0.93 0.70 0.82 T 0.07 0.30 0.18 0000 --- --- --- --- 002084 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 002149 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002321 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 002519 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 002537 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002843 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003072 00000 ------------ T 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 003112 00000 ------------ A 0.67 0.50 0.60 G 0.33 0.50 0.40 0000 --- --- --- --- 003260 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003325 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003351 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003490 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 003558 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003847 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 003926 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004056 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004273 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 004504 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 004517 00000 ------------ C 0.67 0.52 0.60 G 0.33 0.48 0.40 0000 --- --- --- --- 004640 00000 ------------ G 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 004866 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005036 00000 ------------ - 0.93 0.70 0.82 + 0.07 0.30 0.18 0000 --- --- --- --- 005072 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005419 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 005582 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005818 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005876 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006041 00290 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006854 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006861 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006984 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007109 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 007162 00000 ------------ T 0.95 0.86 0.91 G 0.05 0.14 0.09 0000 --- --- --- --- 007165 00000 ------------ T 0.93 0.70 0.82 G 0.07 0.30 0.18 0000 --- --- --- --- 007182 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 007213 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 007286 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 007296 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007316 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007625 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007967 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008107 00000 ------------ G 0.70 0.80 0.75 A 0.30 0.20 0.25 0000 --- --- --- --- 008302 00000 ------------ G 0.93 0.87 0.90 A 0.07 0.13 0.10 0000 --- --- --- --- 008686 00000 ------------ G 0.98 0.76 0.88 C 0.02 0.24 0.12 0000 --- --- --- --- 009257 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009301 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009548 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009595 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009854 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 009992 00000 ------------ A 0.72 0.52 0.62 G 0.28 0.48 0.38 0000 --- --- --- --- 010160 00000 ------------ T 0.93 0.88 0.91 G 0.07 0.12 0.09 0000 --- --- --- --- 010588 00000 ------------ A 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 010637 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 010956 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011014 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011049 00000 ------------ G 0.72 0.80 0.76 A 0.28 0.20 0.24 0000 --- --- --- --- 011059 00000 ------------ A 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 011115 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011201 00000 ------------ T 0.91 0.98 0.94 C 0.09 0.02 0.06 0000 --- --- --- --- 011241 00000 ------------ G 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 011445 00000 ------------ T 0.74 0.46 0.60 C 0.26 0.54 0.40 0000 --- --- --- --- 011461 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 011707 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011713 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012559 00000 ------------ - 0.29 0.20 0.24 + 0.71 0.80 0.76 0000 --- --- --- --- 012614 00000 ------------ C 0.70 0.80 0.75 T 0.30 0.20 0.25 0000 --- --- --- --- 013676 00000 ------------ G 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 013884 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 013948 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 014667 00000 ------------ C 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 014687 00000 ------------ A 0.91 0.70 0.81 G 0.09 0.30 0.19 0000 --- --- --- --- 014773 00000 ------------ G 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 014778 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014904 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014985 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 015096 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015102 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015136 00000 ------------ C 0.93 0.88 0.91 A 0.07 0.12 0.09 0000 --- --- --- --- 015575 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015865 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016119 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016232 00000 ------------ G 0.73 0.80 0.77 A 0.27 0.20 0.23 0000 --- --- --- --- 016513 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 016632 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 016990 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017195 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 017207 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017411 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017674 00000 ------------ C 0.89 1.00 0.96 T 0.11 0.00 0.04 0000 --- --- --- --- 017682 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017860 00000 ------------ - 0.85 1.00 0.92 + 0.15 0.00 0.08 0000 --- --- --- --- 017927 00000 ------------ - 0.16 0.00 0.06 + 0.84 1.00 0.94 0000 --- --- --- --- 018184 00000 ------------ C 0.90 0.87 0.89 T 0.10 0.13 0.11 0000 --- --- --- --- 018235 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018348 00000 ------------ C 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 018802 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018956 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019018 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019459 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019691 00000 ------------ A 0.73 0.81 0.77 G 0.27 0.19 0.23 0000 --- --- --- --- 020147 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020175 00000 ------------ G 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 020288 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020474 00372 5' UTR G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 020876 00774 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0126 GAC AAC ASP(D) ASN(N) 021801 01699 3' UTR G 0.44 0.80 0.62 A 0.56 0.20 0.38 0000 --- --- --- --- 021998 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 022142 01992 3' UTR C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 022625 02475 3' UTR G 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 022690 02540 3' UTR A 0.73 0.80 0.77 G 0.27 0.20 0.23 0000 --- --- --- --- 023115 02965 3' UTR - 0.12 0.00 0.05 + 0.88 1.00 0.95 0000 --- --- --- --- 023230 03080 3' UTR A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 023508 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 023526 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 023851 00000 ------------ A 0.92 0.97 0.95 G 0.08 0.03 0.05 0000 --- --- --- --- 023875 00000 ------------ C 0.76 0.84 0.80 A 0.24 0.16 0.20 0000 --- --- --- --- 023877 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 023917 00000 ------------ T 0.63 0.83 0.73 C 0.37 0.17 0.27 0000 --- --- --- --- 024034 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024849 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025041 00000 ------------ T 0.77 0.80 0.79 C 0.23 0.20 0.21 0000 --- --- --- --- 025118 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 025164 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 025176 00000 ------------ C 0.82 1.00 0.91 T 0.18 0.00 0.09 0000 --- --- --- --- 025213 00000 ------------ T 0.96 0.70 0.83 G 0.04 0.30 0.17 0000 --- --- --- --- 025231 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002321: GCCGC 003847: CTTAT 005036: T 007182: TTTGA 007967: T 012559: T 017860: A 017927: TAAG 023115: CA 024849: TT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 003113 00000 ------------ C 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 003196 00000 ------------ A 0.62 0.77 0.69 T 0.38 0.23 0.31 0000 --- --- --- --- 003293 00000 ------------ C 0.88 0.65 0.78 A 0.12 0.35 0.22 0000 --- --- --- --- 003788 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 003789 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 003815 00000 ------------ C 0.95 0.76 0.85 T 0.05 0.24 0.15 0000 --- --- --- --- 003915 00000 ------------ - 0.80 1.00 0.90 + 0.20 0.00 0.10 0000 --- --- --- --- 004179 00196 SYNON G 0.72 0.93 0.83 A 0.28 0.07 0.17 0039 CAG CAA GLN(Q) GLN(Q) 004820 00837 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0253 ACC AGC THR(T) SER(S) 006505 00000 ------------ A 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 007178 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007741 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 007830 00000 ------------ G 0.71 0.30 0.51 A 0.29 0.70 0.49 0000 --- --- --- --- 008415 00000 ------------ A 0.50 0.70 0.60 G 0.50 0.30 0.40 0000 --- --- --- --- 009489 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009522 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009778 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010054 00000 ------------ A 0.96 0.65 0.81 G 0.04 0.35 0.19 0000 --- --- --- --- 010090 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003789: GGGC 003915: CGGGCGG 007741: CT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000138 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 000200 00000 ------------ C 0.93 0.86 0.90 T 0.07 0.14 0.10 0000 --- --- --- --- 000527 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000554 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000710 00000 ------------ C 0.94 0.83 0.88 T 0.06 0.17 0.12 0000 --- --- --- --- 000874 00000 ------------ G 0.85 0.78 0.82 A 0.15 0.22 0.18 0000 --- --- --- --- 001467 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001634 00000 ------------ C 0.68 0.59 0.63 A 0.32 0.41 0.37 0000 --- --- --- --- 001673 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 001771 -----** NON-SYN C 0.93 0.83 0.88 T 0.07 0.17 0.12 0014 CGT TGT ARG(R) CYS(C) 001840 00000 ------------ G 0.93 0.96 0.94 A 0.07 0.04 0.06 0000 --- --- --- --- 002082 00000 ------------ G 0.54 0.65 0.60 A 0.46 0.35 0.40 0000 --- --- --- --- 002648 00000 ------------ G 0.86 0.76 0.81 C 0.14 0.24 0.19 0000 --- --- --- --- 002839 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003015 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003239 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003303 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 003348 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003396 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003414 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003439 00000 ------------ C 0.85 0.80 0.83 G 0.15 0.20 0.17 0000 --- --- --- --- 003460 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003511 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 003875 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003981 00000 ------------ A 0.79 0.65 0.72 T 0.21 0.35 0.28 0000 --- --- --- --- 003985 00000 ------------ G 0.96 0.85 0.90 T 0.04 0.15 0.10 0000 --- --- --- --- 004251 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004363 00000 ------------ G 0.85 0.91 0.88 A 0.15 0.09 0.12 0000 --- --- --- --- 004462 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004514 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004691 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004805 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006013 -----** NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0354 GGG GAG GLY(G) GLU(E) 006510 -----** 3' UTR T 0.88 0.98 0.92 C 0.12 0.02 0.08 0000 --- --- --- --- 006830 -----** 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006954 -----** 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 007003 -----** 3' UTR G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 007009 -----** 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007069 -----** 3' UTR A 0.79 0.74 0.77 T 0.21 0.26 0.23 0000 --- --- --- --- 007119 -----** 3' UTR G 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 007135 -----** 3' UTR G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 007252 -----** 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008993 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009406 00000 ------------ C 0.85 0.80 0.83 T 0.15 0.20 0.17 0000 --- --- --- --- 009468 00000 ------------ G 0.92 0.98 0.94 A 0.08 0.02 0.06 0000 --- --- --- --- 009612 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009644 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 009737 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009856 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009888 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009966 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010179 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010632 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010922 00000 ------------ G 0.85 0.91 0.88 T 0.15 0.09 0.12 0000 --- --- --- --- 011075 00000 ------------ C 0.93 0.89 0.91 T 0.07 0.11 0.09 0000 --- --- --- --- 011327 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 011353 00000 ------------ G 0.76 0.69 0.73 T 0.24 0.31 0.27 0000 --- --- --- --- 011502 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 011885 00000 ------------ + 0.95 1.00 0.98 - 0.05 0.00 0.02 0000 --- --- --- --- 011970 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012161 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012257 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012574 00000 ------------ T 0.85 0.91 0.88 C 0.15 0.09 0.12 0000 --- --- --- --- 012714 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 012813 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013258 00000 ------------ G 0.81 0.66 0.74 A 0.19 0.34 0.26 0000 --- --- --- --- 013795 00000 ------------ G 0.92 0.82 0.87 A 0.08 0.18 0.13 0000 --- --- --- --- 014211 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 014271 00000 ------------ G 0.89 0.79 0.84 C 0.11 0.21 0.16 0000 --- --- --- --- 014305 00000 ------------ T 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 014447 00000 ------------ T 0.89 0.80 0.84 C 0.11 0.20 0.16 0000 --- --- --- --- 014466 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014548 00000 ------------ T 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- 014722 00000 ------------ G 0.92 0.87 0.89 A 0.08 0.13 0.11 0000 --- --- --- --- 014794 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014981 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 015030 00000 ------------ T 0.88 0.80 0.84 C 0.12 0.20 0.16 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011885: A 014211: CTC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000480 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000697 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001646 00155 NON-SYN T 1.00 0.93 0.97 A 0.00 0.07 0.03 0009 CTC CAC LEU(L) HIS(H) 001801 00223 NON-SYN C 0.83 0.93 0.87 T 0.17 0.07 0.13 0032 CGG TGG ARG(R) TRP(W) 001802 00224 NON-SYN G 0.73 0.89 0.79 A 0.27 0.11 0.21 0032 CGG CAG ARG(R) GLN(Q) 002291 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002512 00534 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0135 TAC TAT TYR(Y) TYR(Y) 002557 00579 SYNON G 0.93 0.85 0.89 A 0.07 0.15 0.11 0150 CGG CGA ARG(R) ARG(R) 002766 00633 SYNON G 1.00 0.91 0.96 A 0.00 0.09 0.04 0168 CCG CCA PRO(P) PRO(P) 003154 00801 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0224 TAC TAT TYR(Y) TYR(Y) 003236 00883 NON-SYN G 0.98 0.96 0.97 A 0.02 0.04 0.03 0252 GGC AGC GLY(G) SER(S) 003568 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003684 00000 ------------ A 0.96 0.95 0.95 G 0.04 0.05 0.05 0000 --- --- --- --- 004022 00000 ------------ G 0.73 0.71 0.72 A 0.27 0.29 0.28 0000 --- --- --- --- 004115 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 004538 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004573 00000 ------------ T 0.73 0.89 0.81 C 0.27 0.11 0.19 0000 --- --- --- --- 004607 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 004913 01494 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0455 GTC GTT VAL(V) VAL(V) 004963 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005162 00000 ------------ T 0.96 0.63 0.80 C 0.04 0.37 0.20 0000 --- --- --- --- 005180 00000 ------------ - 0.73 0.89 0.81 + 0.27 0.11 0.19 0000 --- --- --- --- 006088 01822 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0565 AAA GAA LYS(K) GLU(E) 006484 00000 ------------ A 0.90 0.89 0.89 G 0.10 0.11 0.11 0000 --- --- --- --- 006527 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 006642 02082 NON-SYN T 0.98 1.00 0.99 G 0.02 0.00 0.01 0651 GAT GAG ASP(D) GLU(E) 006943 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007202 00000 ------------ G 0.46 0.65 0.55 A 0.54 0.35 0.45 0000 --- --- --- --- 007454 02447 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 007541 00000 ------------ T 0.74 0.88 0.80 C 0.26 0.12 0.20 0000 --- --- --- --- 007580 00000 ------------ T 0.74 0.90 0.81 C 0.26 0.10 0.19 0000 --- --- --- --- 008221 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008311 00000 ------------ C 0.71 0.89 0.80 T 0.29 0.11 0.20 0000 --- --- --- --- 008497 00000 ------------ C 0.75 0.93 0.84 T 0.25 0.07 0.16 0000 --- --- --- --- 008690 00000 ------------ - 0.12 0.05 0.09 + 0.88 0.95 0.91 0000 --- --- --- --- 009099 00000 ------------ G 0.96 0.61 0.79 A 0.04 0.39 0.21 0000 --- --- --- --- 009110 00000 ------------ G 0.00 0.02 0.01 A 1.00 0.98 0.99 0000 --- --- --- --- 009878 00000 ------------ C 0.85 0.75 0.80 A 0.15 0.25 0.20 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004115: TGA 005180: AT 008690: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000313 00000 ------------ T 0.75 0.48 0.62 C 0.25 0.52 0.38 0000 --- --- --- --- 000327 00000 ------------ G 0.50 0.50 0.50 A 0.50 0.50 0.50 0000 --- --- --- --- 001592 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 003574 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003682 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003923 00000 ------------ T 0.85 0.77 0.82 C 0.15 0.23 0.18 0000 --- --- --- --- 004458 00099 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0027 GGT GGC GLY(G) GLY(G) 005029 00299 NON-SYN G 0.92 1.00 0.96 A 0.08 0.00 0.04 0094 CGG CAG ARG(R) GLN(Q) 005355 00000 ------------ A 0.76 0.74 0.75 G 0.24 0.26 0.25 0000 --- --- --- --- 006019 00000 ------------ C 0.87 0.86 0.87 T 0.13 0.14 0.13 0000 --- --- --- --- 007644 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 007660 00000 ------------ G 0.79 0.71 0.75 A 0.21 0.29 0.25 0000 --- --- --- --- 009056 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009257 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009351 00000 ------------ G 1.00 0.82 0.93 C 0.00 0.18 0.07 0000 --- --- --- --- 009369 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 009499 00000 ------------ C 0.91 0.82 0.88 T 0.09 0.18 0.12 0000 --- --- --- --- 009854 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 009953 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001592: C 009854: TGGTGGGTGCTCCTAAGC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000781 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 000784 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 000839 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000855 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000875 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000989 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000991 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001367 00000 ------------ G 1.00 0.94 0.97 A 0.00 0.06 0.03 0000 --- --- --- --- 001454 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001482 00000 ------------ G 0.87 0.95 0.91 T 0.13 0.05 0.09 0000 --- --- --- --- 001711 00000 ------------ G 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 001773 00000 ------------ C 0.96 1.00 0.97 G 0.04 0.00 0.03 0000 --- --- --- --- 001797 00000 ------------ G 0.42 0.67 0.51 C 0.58 0.33 0.49 0000 --- --- --- --- 001825 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001966 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 002064 00048 5' UTR - 0.04 0.00 0.03 + 0.96 1.00 0.97 0000 --- --- --- --- 002076 00060 5' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002291 00000 ------------ G 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 002340 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002358 00000 ------------ T 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 002423 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 002468 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 002478 00000 ------------ G 0.95 0.95 0.95 C 0.05 0.05 0.05 0000 --- --- --- --- 002549 00000 ------------ - 0.89 0.98 0.93 + 0.11 0.02 0.07 0000 --- --- --- --- 002574 00000 ------------ - 0.22 0.04 0.13 + 0.78 0.96 0.87 0000 --- --- --- --- 002710 00000 ------------ T 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 002992 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003203 00000 ------------ C 0.74 1.00 0.87 G 0.26 0.00 0.13 0000 --- --- --- --- 003218 00000 ------------ - 0.12 0.02 0.08 + 0.88 0.98 0.92 0000 --- --- --- --- 004360 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 004432 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 004478 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004588 00000 ------------ G 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 004664 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 004760 00000 ------------ G 0.82 0.93 0.88 A 0.18 0.07 0.12 0000 --- --- --- --- 004950 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005179 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005203 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 005259 00000 ------------ T 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 005310 00000 ------------ G 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 005391 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005403 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005426 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 005447 00000 ------------ C 0.68 0.89 0.79 T 0.32 0.11 0.21 0000 --- --- --- --- 005469 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 005882 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006180 00000 ------------ C 1.00 0.43 0.70 T 0.00 0.57 0.30 0000 --- --- --- --- 006221 00000 ------------ G 1.00 0.35 0.65 A 0.00 0.65 0.35 0000 --- --- --- --- 006265 00000 ------------ A 0.82 0.90 0.86 G 0.18 0.10 0.14 0000 --- --- --- --- 006268 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 006276 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 006469 00000 ------------ - 0.78 0.24 0.49 + 0.23 0.76 0.51 0000 --- --- --- --- 007101 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007169 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007170 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007265 00000 ------------ T 0.88 0.98 0.92 C 0.12 0.02 0.08 0000 --- --- --- --- 008173 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008231 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008265 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008291 00000 ------------ C 0.91 0.33 0.62 T 0.09 0.67 0.38 0000 --- --- --- --- 008300 00000 ------------ G 1.00 0.43 0.72 A 0.00 0.57 0.28 0000 --- --- --- --- 008482 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008516 00000 ------------ A 1.00 0.35 0.67 G 0.00 0.65 0.33 0000 --- --- --- --- 008541 00000 ------------ C 0.61 0.78 0.70 T 0.39 0.22 0.30 0000 --- --- --- --- 008663 00000 ------------ T 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 008756 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 008761 00000 ------------ - 0.12 0.02 0.07 + 0.88 0.98 0.93 0000 --- --- --- --- 008857 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008938 00000 ------------ G 0.88 0.96 0.91 C 0.12 0.04 0.09 0000 --- --- --- --- 008956 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 009133 00641 SYNON C 0.88 1.00 0.93 T 0.12 0.00 0.07 0181 GAC GAT ASP(D) ASP(D) 009205 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 009219 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 009413 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009518 00000 ------------ C 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 009660 00000 ------------ G 1.00 0.35 0.68 A 0.00 0.65 0.32 0000 --- --- --- --- 009670 00000 ------------ - 1.00 0.43 0.72 + 0.00 0.57 0.28 0000 --- --- --- --- 009774 00000 ------------ G 0.58 0.78 0.68 C 0.42 0.22 0.32 0000 --- --- --- --- 009839 00000 ------------ G 0.58 0.78 0.68 A 0.42 0.22 0.32 0000 --- --- --- --- 009855 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009894 00680 SYNON C 0.88 0.98 0.93 G 0.12 0.02 0.07 0194 TCC TCG SER(S) SER(S) 010081 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 010171 00773 SYNON T 0.58 0.78 0.68 C 0.42 0.22 0.32 0225 GCT GCC ALA(A) ALA(A) 010299 00000 ------------ C 0.88 0.33 0.61 A 0.12 0.67 0.39 0000 --- --- --- --- 010316 00000 ------------ C 1.00 0.43 0.72 T 0.00 0.57 0.28 0000 --- --- --- --- 010317 00000 ------------ G 0.60 0.78 0.69 A 0.40 0.22 0.31 0000 --- --- --- --- 010328 00000 ------------ T 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 010343 00000 ------------ A 0.88 0.93 0.90 G 0.12 0.07 0.10 0000 --- --- --- --- 010347 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 010376 00000 ------------ A 0.89 0.96 0.92 C 0.11 0.04 0.08 0000 --- --- --- --- 010393 00000 ------------ C 0.61 0.78 0.70 G 0.39 0.22 0.30 0000 --- --- --- --- 010422 00000 ------------ A 0.45 0.77 0.62 C 0.55 0.23 0.38 0000 --- --- --- --- 011130 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011139 00000 ------------ G 0.62 0.98 0.79 A 0.38 0.02 0.21 0000 --- --- --- --- 011289 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011321 00000 ------------ C 0.58 0.84 0.71 T 0.42 0.16 0.29 0000 --- --- --- --- 011426 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011450 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 011462 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 011480 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 011583 00000 ------------ A 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 011598 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 011759 00000 ------------ C 1.00 0.68 0.85 T 0.00 0.32 0.15 0000 --- --- --- --- 011973 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 011974 00000 ------------ G 1.00 0.34 0.68 A 0.00 0.66 0.32 0000 --- --- --- --- 012011 00000 ------------ G 0.56 0.78 0.67 A 0.44 0.22 0.33 0000 --- --- --- --- 012199 00000 ------------ C 0.58 0.80 0.69 T 0.42 0.20 0.31 0000 --- --- --- --- 012281 01287 3' UTR G 1.00 0.43 0.72 A 0.00 0.57 0.28 0000 --- --- --- --- 012433 01439 3' UTR T 0.44 0.78 0.61 A 0.56 0.22 0.39 0000 --- --- --- --- 012774 01780 3' UTR G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 012924 01930 3' UTR T 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 012956 01962 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 012966 01972 3' UTR G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 013106 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013168 00000 ------------ A 0.87 0.98 0.92 G 0.13 0.02 0.08 0000 --- --- --- --- 013204 00000 ------------ G 0.87 0.98 0.92 A 0.13 0.02 0.08 0000 --- --- --- --- 013217 00000 ------------ G 0.87 0.98 0.92 A 0.13 0.02 0.08 0000 --- --- --- --- 013233 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 013250 00000 ------------ A 0.83 0.98 0.90 G 0.17 0.02 0.10 0000 --- --- --- --- 013266 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013318 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000781: CCTTCGCGTTCGGC 001966: G 002064: GGC 002423: GAGCCCGGCCTC 002549: TTCCCGGCGGAGGTTGAGGATCTCG 002574: GA 003218: G 004360: ATAG 005203: G 006469: GT 008761: GTGCCTTCCCGAAGGGG 009670: A 011973: GG 013233: AG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000152 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 000315 00000 ------------ A 0.90 0.87 0.88 T 0.10 0.13 0.12 0000 --- --- --- --- 000501 00000 ------------ G 0.88 0.43 0.66 A 0.12 0.57 0.34 0000 --- --- --- --- 000554 00000 ------------ T 0.88 0.43 0.66 C 0.12 0.57 0.34 0000 --- --- --- --- 000704 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000786 00000 ------------ T 0.88 0.43 0.66 G 0.12 0.57 0.34 0000 --- --- --- --- 000809 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000951 00000 ------------ G 0.96 0.87 0.91 A 0.04 0.13 0.09 0000 --- --- --- --- 001180 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 001269 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 001355 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001372 00000 ------------ A 0.90 0.86 0.88 G 0.10 0.14 0.12 0000 --- --- --- --- 001493 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001588 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001701 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 001852 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001866 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002077 00077 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0023 GAG AAG GLU(E) LYS(K) 002232 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002463 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002487 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002629 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002848 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002859 00000 ------------ A 0.91 0.45 0.68 G 0.09 0.55 0.32 0000 --- --- --- --- 002904 00000 ------------ C 0.98 0.93 0.95 T 0.02 0.07 0.05 0000 --- --- --- --- 002908 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002982 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003339 00286 SYNON G 0.81 0.46 0.64 A 0.19 0.54 0.36 0092 GGG GGA GLY(G) GLY(G) 003872 00819 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004128 00000 ------------ T 0.50 0.67 0.59 G 0.50 0.33 0.41 0000 --- --- --- --- 004163 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 004319 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004391 00000 ------------ G 0.69 0.87 0.78 A 0.31 0.13 0.22 0000 --- --- --- --- 004510 00000 ------------ C 0.50 0.67 0.59 G 0.50 0.33 0.41 0000 --- --- --- --- 004833 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004982 00000 ------------ G 0.82 0.46 0.63 A 0.18 0.54 0.37 0000 --- --- --- --- 005023 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005296 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 005397 00000 ------------ G 0.47 0.64 0.55 A 0.53 0.36 0.45 0000 --- --- --- --- 005614 00000 ------------ G 0.45 0.65 0.56 A 0.55 0.35 0.44 0000 --- --- --- --- 005716 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005780 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001269: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000389 00000 ------------ G 0.56 0.52 0.54 A 0.44 0.48 0.46 0000 --- --- --- --- 000744 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000800 00000 ------------ C 0.95 0.80 0.87 T 0.05 0.20 0.13 0000 --- --- --- --- 001071 00000 ------------ A 0.86 0.61 0.73 G 0.14 0.39 0.27 0000 --- --- --- --- 001263 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001514 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001537 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001661 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002064 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 002418 00000 ------------ C 0.59 0.85 0.72 G 0.41 0.15 0.28 0000 --- --- --- --- 002557 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003212 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003664 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 003668 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003743 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 003969 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 003988 00000 ------------ G 0.96 0.89 0.92 A 0.04 0.11 0.08 0000 --- --- --- --- 004072 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004196 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 004235 00000 ------------ - 0.95 0.90 0.93 + 0.05 0.10 0.07 0000 --- --- --- --- 004734 00000 ------------ A 0.97 0.88 0.92 G 0.03 0.12 0.08 0000 --- --- --- --- 005122 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005650 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005746 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 005859 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007769 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007818 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007830 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008220 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 008515 00877 FRAME SHIFT - 0.00 0.02 0.01 + 1.00 0.98 0.99 0281 --- GTG --- --- 008736 00000 ------------ C 0.97 0.90 0.94 G 0.03 0.10 0.06 0000 --- --- --- --- 008824 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009092 00000 ------------ A 0.96 0.89 0.92 G 0.04 0.11 0.08 0000 --- --- --- --- 009204 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009245 00000 ------------ - 0.00 0.05 0.03 + 1.00 0.95 0.97 0000 --- --- --- --- 010248 00990 NON-SYN G 1.00 0.91 0.95 C 0.00 0.09 0.05 0318 GAG GAC GLU(E) ASP(D) 010375 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011177 00000 ------------ - 0.21 0.12 0.17 + 0.79 0.88 0.83 0000 --- --- --- --- 011574 01059 SYNON G 0.76 0.91 0.84 A 0.24 0.09 0.16 0341 GCG GCA ALA(A) ALA(A) 011772 00000 ------------ G 0.76 0.89 0.83 T 0.24 0.11 0.17 0000 --- --- --- --- 011966 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013589 00000 ------------ T 0.75 0.89 0.82 C 0.25 0.11 0.18 0000 --- --- --- --- 013610 00000 ------------ C 0.68 0.89 0.78 T 0.32 0.11 0.22 0000 --- --- --- --- 013781 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013807 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014279 00000 ------------ G 0.73 0.54 0.63 A 0.27 0.46 0.37 0000 --- --- --- --- 014408 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014666 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 014912 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015203 00000 ------------ T 0.73 0.89 0.81 C 0.27 0.11 0.19 0000 --- --- --- --- 015516 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015574 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015782 00000 ------------ G 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 016383 00000 ------------ A 0.90 0.89 0.89 G 0.10 0.11 0.11 0000 --- --- --- --- 016604 00000 ------------ G 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 016898 00000 ------------ G 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 017371 00000 ------------ G 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 017380 00000 ------------ G 0.73 0.89 0.81 T 0.27 0.11 0.19 0000 --- --- --- --- 018451 00000 ------------ G 0.97 0.93 0.95 C 0.03 0.07 0.05 0000 --- --- --- --- 018625 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 019300 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 019517 02236 NON-SYN C 0.93 1.00 0.96 T 0.07 0.00 0.04 0734 CGC TGC ARG(R) CYS(C) 020466 00000 ------------ T 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 020621 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 020622 00000 ------------ G 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 021111 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021332 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021377 00000 ------------ G 0.93 0.85 0.89 A 0.07 0.15 0.11 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003969: GCCTCGGT 004235: AACC 008515: GTGGACAGGGTCAGGAATCAGGAGTCTG 009245: A 011177: GTA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000834 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000836 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000963 00000 ------------ T 0.96 0.45 0.71 G 0.04 0.55 0.29 0000 --- --- --- --- 001014 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 001883 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001975 00033 5' UTR C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002190 00000 ------------ G 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 002278 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002302 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002313 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002422 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002526 00000 ------------ T 0.68 0.61 0.64 G 0.33 0.39 0.36 0000 --- --- --- --- 002527 00000 ------------ G 0.68 0.61 0.64 T 0.33 0.39 0.36 0000 --- --- --- --- 002528 00000 ------------ A 0.68 0.60 0.64 G 0.33 0.40 0.36 0000 --- --- --- --- 002599 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002933 00000 ------------ - 0.38 0.16 0.28 + 0.62 0.84 0.72 0000 --- --- --- --- 002937 00000 ------------ T 0.62 0.85 0.73 C 0.38 0.15 0.27 0000 --- --- --- --- 002945 00000 ------------ G 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 002976 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 003413 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003646 00000 ------------ - 0.72 1.00 0.86 + 0.28 0.00 0.14 0000 --- --- --- --- 003727 00000 ------------ T 0.93 0.80 0.87 C 0.07 0.20 0.13 0000 --- --- --- --- 003739 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 004121 00000 ------------ A 0.79 0.71 0.76 G 0.21 0.29 0.24 0000 --- --- --- --- 004268 00364 NON-SYN C 0.93 0.79 0.87 G 0.07 0.21 0.13 0102 CGC GGC ARG(R) GLY(G) 004453 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004577 00000 ------------ A 0.98 0.78 0.88 C 0.02 0.22 0.12 0000 --- --- --- --- 004613 00000 ------------ G 0.77 0.93 0.85 A 0.23 0.07 0.15 0000 --- --- --- --- 004721 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 005815 00000 ------------ - 0.02 0.11 0.06 + 0.98 0.89 0.94 0000 --- --- --- --- 006366 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006379 00000 ------------ C 0.96 0.73 0.84 T 0.04 0.27 0.16 0000 --- --- --- --- 006462 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 006572 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007048 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 007071 00000 ------------ - 0.05 0.00 0.03 + 0.95 1.00 0.97 0000 --- --- --- --- 007446 00000 ------------ C 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 007464 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008623 00801 SYNON C 1.00 0.95 0.98 T 0.00 0.05 0.02 0247 AAC AAT ASN(N) ASN(N) 008870 00000 ------------ G 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 008873 00000 ------------ T 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 009147 00843 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0261 TAC TAT TYR(Y) TYR(Y) 009259 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009367 00972 SYNON G 0.80 0.89 0.85 A 0.20 0.11 0.15 0304 CGG CGA ARG(R) ARG(R) 009396 01001 NON-SYN C 1.00 0.76 0.88 T 0.00 0.24 0.12 0314 CCC CTC PRO(P) LEU(L) 009483 00000 ------------ C 0.92 0.76 0.83 G 0.08 0.24 0.17 0000 --- --- --- --- 010700 00000 ------------ C 0.67 0.72 0.69 T 0.33 0.28 0.31 0000 --- --- --- --- 010940 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010969 00000 ------------ A 0.76 0.85 0.80 T 0.24 0.15 0.20 0000 --- --- --- --- 011164 00000 ------------ G 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 011588 01467 NON-SYN G 0.96 1.00 0.98 C 0.04 0.00 0.02 0469 GAG GAC GLU(E) ASP(D) 011710 00000 ------------ C 0.84 1.00 0.91 T 0.16 0.00 0.09 0000 --- --- --- --- 011876 01614 SYNON C 0.98 0.86 0.93 A 0.02 0.14 0.07 0518 CCC CCA PRO(P) PRO(P) 011975 01713 SYNON G 0.96 1.00 0.98 T 0.04 0.00 0.02 0551 GTG GTT VAL(V) VAL(V) 012954 01896 SYNON G 0.80 0.96 0.88 A 0.20 0.04 0.12 0612 ACG ACA THR(T) THR(T) 013199 00000 ------------ - 0.70 0.85 0.77 + 0.30 0.15 0.23 0000 --- --- --- --- 013407 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 013454 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 013563 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013573 00000 ------------ C 0.79 0.96 0.87 A 0.21 0.04 0.13 0000 --- --- --- --- 013588 00000 ------------ G 0.98 0.85 0.91 A 0.02 0.15 0.09 0000 --- --- --- --- 013612 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013842 00000 ------------ G 0.46 0.70 0.57 T 0.54 0.30 0.43 0000 --- --- --- --- 014342 00000 ------------ C 0.74 0.74 0.74 T 0.26 0.26 0.26 0000 --- --- --- --- 014989 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014991 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015095 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015590 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015740 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015834 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 015845 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016182 00000 ------------ C 0.94 0.81 0.89 A 0.06 0.19 0.11 0000 --- --- --- --- 016337 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 016364 00000 ------------ G 0.89 0.75 0.83 A 0.11 0.25 0.17 0000 --- --- --- --- 016366 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 017549 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 017992 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 018377 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 018470 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018620 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018819 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019008 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 019295 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 019473 00000 ------------ - 0.00 0.07 0.04 + 1.00 0.93 0.96 0000 --- --- --- --- 019590 00000 ------------ T 0.88 0.71 0.80 C 0.12 0.29 0.20 0000 --- --- --- --- 019889 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 019890 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 019910 00000 ------------ T 0.97 0.98 0.97 C 0.03 0.02 0.03 0000 --- --- --- --- 020064 00000 ------------ T 0.87 0.73 0.79 C 0.13 0.27 0.21 0000 --- --- --- --- 020207 00000 ------------ C 0.87 0.95 0.91 G 0.13 0.05 0.09 0000 --- --- --- --- 020416 00000 ------------ G 0.80 0.64 0.72 A 0.20 0.36 0.28 0000 --- --- --- --- 020505 02481 SYNON C 0.75 0.64 0.70 G 0.25 0.36 0.30 0807 GTC GTG VAL(V) VAL(V) 020514 02490 SYNON G 0.93 1.00 0.96 A 0.07 0.00 0.04 0810 TCG TCA SER(S) SER(S) 020620 00000 ------------ C 0.78 0.63 0.70 T 0.23 0.37 0.30 0000 --- --- --- --- 020640 00000 ------------ G 0.78 0.63 0.70 C 0.23 0.37 0.30 0000 --- --- --- --- 020772 00000 ------------ G 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 020824 00000 ------------ G 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 020846 00000 ------------ T 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 020874 00000 ------------ C 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 020883 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020924 00000 ------------ T 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 020937 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020982 00000 ------------ A 0.75 0.63 0.69 G 0.25 0.37 0.31 0000 --- --- --- --- 020985 00000 ------------ T 0.67 0.63 0.65 C 0.33 0.37 0.35 0000 --- --- --- --- 021027 00000 ------------ C 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 021053 00000 ------------ C 0.90 0.91 0.90 A 0.10 0.09 0.10 0000 --- --- --- --- 021149 00000 ------------ T 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 023669 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 023703 00000 ------------ G 0.85 0.72 0.78 C 0.15 0.28 0.22 0000 --- --- --- --- 024189 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 024208 00000 ------------ C 0.93 0.90 0.92 T 0.07 0.10 0.08 0000 --- --- --- --- 024235 00000 ------------ T 0.95 0.89 0.93 A 0.05 0.11 0.07 0000 --- --- --- --- 024525 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 024833 00000 ------------ A 0.79 0.63 0.71 C 0.21 0.37 0.29 0000 --- --- --- --- 025072 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025099 02648 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0863 AGG AAG ARG(R) LYS(K) 025226 02775 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0905 ACC ACT THR(T) THR(T) 025256 02805 SYNON C 0.88 0.72 0.80 T 0.12 0.28 0.20 0915 GCC GCT ALA(A) ALA(A) 025447 00000 ------------ - 0.77 0.63 0.70 + 0.23 0.37 0.30 0000 --- --- --- --- 025722 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025751 00000 ------------ C 0.80 0.57 0.68 A 0.20 0.43 0.32 0000 --- --- --- --- 025752 00000 ------------ A 0.74 0.57 0.65 G 0.26 0.43 0.35 0000 --- --- --- --- 025838 00000 ------------ T 0.77 0.57 0.67 C 0.23 0.43 0.33 0000 --- --- --- --- 025879 00000 ------------ A 0.90 0.91 0.90 G 0.10 0.09 0.10 0000 --- --- --- --- 025884 00000 ------------ T 0.77 0.55 0.66 C 0.23 0.45 0.34 0000 --- --- --- --- 025974 00000 ------------ T 0.77 0.63 0.70 C 0.23 0.37 0.30 0000 --- --- --- --- 025982 00000 ------------ A 0.77 0.64 0.71 C 0.23 0.36 0.29 0000 --- --- --- --- 026076 00000 ------------ T 0.77 0.64 0.71 C 0.23 0.36 0.29 0000 --- --- --- --- 026116 00000 ------------ C 0.81 0.64 0.72 G 0.19 0.36 0.28 0000 --- --- --- --- 026177 00000 ------------ G 0.87 0.73 0.80 A 0.13 0.27 0.20 0000 --- --- --- --- 026331 00000 ------------ C 0.80 0.64 0.72 T 0.20 0.36 0.28 0000 --- --- --- --- 026495 00000 ------------ C 0.72 0.62 0.67 T 0.28 0.38 0.33 0000 --- --- --- --- 026520 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026578 00000 ------------ G 0.59 0.40 0.50 C 0.41 0.60 0.50 0000 --- --- --- --- 026629 00000 ------------ G 0.89 0.95 0.92 T 0.11 0.05 0.08 0000 --- --- --- --- 027159 00000 ------------ C 0.73 0.52 0.63 T 0.27 0.48 0.37 0000 --- --- --- --- 027196 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 027678 00000 ------------ C 0.57 0.48 0.52 G 0.43 0.52 0.48 0000 --- --- --- --- 027800 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 028281 00000 ------------ C 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 028417 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 028423 00000 ------------ A 0.96 0.94 0.95 C 0.04 0.06 0.05 0000 --- --- --- --- 028433 00000 ------------ C 0.74 0.50 0.63 T 0.26 0.50 0.37 0000 --- --- --- --- 028473 00000 ------------ C 0.79 0.81 0.79 T 0.21 0.19 0.21 0000 --- --- --- --- 028483 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 028521 00000 ------------ A 0.95 0.94 0.95 C 0.05 0.06 0.05 0000 --- --- --- --- 028537 00000 ------------ + 0.86 0.92 0.89 - 0.14 0.08 0.11 0000 --- --- --- --- 028609 00000 ------------ C 0.86 0.94 0.90 T 0.14 0.06 0.10 0000 --- --- --- --- 028697 00000 ------------ T 0.68 0.89 0.78 C 0.32 0.11 0.23 0000 --- --- --- --- 028735 00000 ------------ A 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 028795 00000 ------------ A 0.73 0.50 0.62 G 0.27 0.50 0.38 0000 --- --- --- --- 028859 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 028997 00000 ------------ T 0.73 0.97 0.83 C 0.27 0.03 0.17 0000 --- --- --- --- 029026 00000 ------------ C 0.95 0.94 0.95 G 0.05 0.06 0.05 0000 --- --- --- --- 029044 00000 ------------ T 0.73 0.94 0.82 C 0.27 0.06 0.17 0000 --- --- --- --- 029109 00000 ------------ G 0.60 0.59 0.60 A 0.40 0.41 0.40 0000 --- --- --- --- 029293 00000 ------------ C 0.76 0.93 0.85 T 0.24 0.07 0.15 0000 --- --- --- --- 029363 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 029407 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 029440 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 029517 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 029868 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029885 00000 ------------ C 0.75 0.93 0.84 G 0.25 0.07 0.16 0000 --- --- --- --- 029891 00000 ------------ T 0.75 0.93 0.84 A 0.25 0.07 0.16 0000 --- --- --- --- 030169 00000 ------------ A 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 030238 00000 ------------ T 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 030360 00000 ------------ G 0.90 0.95 0.92 A 0.10 0.05 0.08 0000 --- --- --- --- 030415 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 030728 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030729 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 030756 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030887 00000 ------------ T 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 031050 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 031147 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 031257 00000 ------------ A 0.75 0.93 0.83 C 0.25 0.07 0.17 0000 --- --- --- --- 031260 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031320 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 031531 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 031547 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031555 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031556 00000 ------------ G 0.89 0.92 0.90 A 0.11 0.08 0.10 0000 --- --- --- --- 031699 00000 ------------ G 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 031707 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031715 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 031876 00000 ------------ A 0.90 0.93 0.92 G 0.10 0.07 0.08 0000 --- --- --- --- 031910 00000 ------------ G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 031935 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 031937 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 031939 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 032068 00000 ------------ A 0.93 0.87 0.90 C 0.07 0.13 0.10 0000 --- --- --- --- 032110 00000 ------------ G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 032188 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 032220 00000 ------------ C 0.59 0.59 0.59 T 0.41 0.41 0.41 0000 --- --- --- --- 032221 00000 ------------ G 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 032266 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 032405 00000 ------------ A 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 032437 00000 ------------ A 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 032546 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032682 00000 ------------ A 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 032701 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 032756 00000 ------------ T 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 032819 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 032827 00000 ------------ T 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 033174 00000 ------------ T 0.93 0.93 0.93 C 0.07 0.07 0.07 0000 --- --- --- --- 033194* 033279 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 033374 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 033524 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 033616 00000 ------------ A 0.62 0.57 0.60 G 0.38 0.43 0.40 0000 --- --- --- --- 033639 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 033821 00000 ------------ G 0.64 0.57 0.61 T 0.36 0.43 0.39 0000 --- --- --- --- 033918 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034281 00000 ------------ A 0.43 0.59 0.51 G 0.57 0.41 0.49 0000 --- --- --- --- 034390 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 034413 00000 ------------ G 0.43 0.59 0.51 A 0.57 0.41 0.49 0000 --- --- --- --- 034480 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 034483 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 034535 00000 ------------ G 0.76 0.65 0.71 A 0.24 0.35 0.29 0000 --- --- --- --- 034667 00000 ------------ G 0.58 0.41 0.50 A 0.42 0.59 0.50 0000 --- --- --- --- 034769 00000 ------------ G 0.42 0.59 0.50 C 0.58 0.41 0.50 0000 --- --- --- --- 034885 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034913 00000 ------------ C 0.43 0.59 0.51 T 0.57 0.41 0.49 0000 --- --- --- --- 035086 00000 ------------ C 0.57 0.42 0.50 T 0.43 0.57 0.50 0000 --- --- --- --- 035164 00000 ------------ T 0.43 0.60 0.51 C 0.57 0.40 0.49 0000 --- --- --- --- 035267 00000 ------------ G 0.42 0.59 0.50 C 0.58 0.41 0.50 0000 --- --- --- --- 035347 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035532 00000 ------------ G 0.94 0.89 0.91 T 0.06 0.11 0.09 0000 --- --- --- --- 035538 00000 ------------ C 0.42 0.59 0.50 T 0.58 0.41 0.50 0000 --- --- --- --- 035548 00000 ------------ C 0.42 0.59 0.50 T 0.58 0.41 0.50 0000 --- --- --- --- 036021 00000 ------------ G 0.89 0.89 0.89 A 0.11 0.11 0.11 0000 --- --- --- --- 036176 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 036406 03731 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 1224 GGT GAT GLY(G) ASP(D) 036488 03813 SYNON C 0.93 1.00 0.97 A 0.07 0.00 0.03 1251 CCC CCA PRO(P) PRO(P) 036591 00000 ------------ C 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 036697 00000 ------------ C 0.59 0.61 0.60 G 0.41 0.39 0.40 0000 --- --- --- --- 036735 00000 ------------ G 0.58 0.55 0.57 A 0.42 0.45 0.43 0000 --- --- --- --- 036750 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 036863 00000 ------------ G 0.73 0.86 0.79 C 0.27 0.14 0.21 0000 --- --- --- --- 036947 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 036957 00000 ------------ G 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 037287 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 037376 00000 ------------ C 0.70 0.67 0.68 G 0.30 0.33 0.32 0000 --- --- --- --- 037450 00000 ------------ C 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 037827 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 038089 04160 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 1367 ATA ACA ILE(I) THR(T) 038161 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038383 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038483 00000 ------------ C 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 038538 00000 ------------ T 0.87 0.89 0.88 C 0.13 0.11 0.12 0000 --- --- --- --- 038834 00000 ------------ G 0.52 0.67 0.60 A 0.48 0.33 0.40 0000 --- --- --- --- 038908 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038926 00000 ------------ T 0.87 0.91 0.89 C 0.13 0.09 0.11 0000 --- --- --- --- 038931 00000 ------------ C 0.89 0.91 0.90 T 0.11 0.09 0.10 0000 --- --- --- --- 039058 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 039069 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039536 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 039654 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039727 00000 ------------ C 0.57 0.69 0.63 G 0.43 0.31 0.37 0000 --- --- --- --- 039807 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 040019 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 040124 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 040147 00000 ------------ - 0.46 0.33 0.39 + 0.54 0.67 0.61 0000 --- --- --- --- 040310 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040690 04371 SYNON C 0.91 0.90 0.91 T 0.09 0.10 0.09 1437 GCC GCT ALA(A) ALA(A) 041130 00000 ------------ A 0.90 0.91 0.90 G 0.10 0.09 0.10 0000 --- --- --- --- 041251 00000 ------------ C 0.88 0.89 0.88 T 0.12 0.11 0.12 0000 --- --- --- --- 041744 00000 ------------ A 0.59 0.43 0.51 G 0.41 0.57 0.49 0000 --- --- --- --- 041753 00000 ------------ C 0.57 0.66 0.62 A 0.43 0.34 0.38 0000 --- --- --- --- 042171 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 042908 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 043078 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 043103 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 043118 00000 ------------ G 0.47 0.53 0.50 A 0.53 0.47 0.50 0000 --- --- --- --- 043169 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 043170 00000 ------------ G 0.57 0.47 0.53 A 0.42 0.53 0.47 0000 --- --- --- --- 043321 00000 ------------ G 0.85 0.79 0.82 A 0.15 0.21 0.18 0000 --- --- --- --- 043810 00000 ------------ G 0.94 0.74 0.84 T 0.06 0.26 0.16 0000 --- --- --- --- 043928 00000 ------------ T 0.57 0.48 0.52 C 0.43 0.52 0.48 0000 --- --- --- --- 044059 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 044186 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044207 00000 ------------ C 0.87 0.90 0.88 T 0.13 0.10 0.12 0000 --- --- --- --- 044566 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044692 04956 SYNON T 0.57 0.55 0.56 C 0.43 0.45 0.44 1632 CCT CCC PRO(P) PRO(P) 044882 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 044949 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045206 00000 ------------ G 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 045444 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 045522 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 045796 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 045850 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 046001 00000 ------------ C 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 046239 00000 ------------ T 0.79 0.75 0.77 G 0.21 0.25 0.23 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002933: C 003646: CCTTCCCTGAGACCCCACCCCTTCTGAGACTCCTCCCCTTCTGAGTCCCTC 005815: CC 007071: G 013199: GTTT 015740: A 019473: G 025447: A 027196: CAAAAA 027800: A 028537: GCTCTTCATGAGACCCCGCCTCTCCTCAAGGCCATGCCCATCCCCTGAGGGCCCCCCACCTCTTCTCAAGGCCACGCCCTCTGAGGCCCTGACTCCTCCCAGGCCAGGCTCTTCATGAGACCCCGCCTCTCCTCAAGGCCATGCCCATCCCCTGAGGGCCTCCCACCTCTTCTCAAGGCCACGCCCTCTGAGGCCCTGACTCCTCCCAGGCCAG 029868: G 033524: AT 037287: G 040019: C 040147: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 033194 A 0.07 0.00 0.03 C 0.83 0.93 0.87 G 0.11 0.07 0.09 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000275 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000310 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000546 00000 ------------ T 0.80 0.72 0.76 C 0.20 0.28 0.24 0000 --- --- --- --- 000548 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 000563 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000846 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001039 00000 ------------ C 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 001464 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002221 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002306 00000 ------------ A 0.88 0.91 0.89 G 0.12 0.09 0.11 0000 --- --- --- --- 002441 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002567 00000 ------------ G 0.77 0.73 0.75 T 0.23 0.27 0.25 0000 --- --- --- --- 002595 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 003029 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003100 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003818 00000 ------------ G 0.80 0.52 0.66 A 0.20 0.48 0.34 0000 --- --- --- --- 004086 00000 ------------ - 0.28 0.50 0.40 + 0.72 0.50 0.60 0000 --- --- --- --- 004106 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 004544 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 004652 00000 ------------ C 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 004792 00000 ------------ C 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 004803 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 004824 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005153 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005157 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005161 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005191 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005206 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005258 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 005337 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 005844 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006104 00000 ------------ T 0.33 0.70 0.51 G 0.67 0.30 0.49 0000 --- --- --- --- 006699 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 006887 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 007171 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007878 00000 ------------ C 0.87 0.91 0.89 T 0.13 0.09 0.11 0000 --- --- --- --- 008171 EXON -1 SPLICE G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 008391 00302 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0070 CTC CTT LEU(L) LEU(L) 008588 00499 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0136 GTA GCA VAL(V) ALA(A) 008646 00557 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0155 ATT ATC ILE(I) ILE(I) 009707 01618 3' UTR G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 009776 01687 3' UTR A 0.77 0.70 0.73 G 0.23 0.30 0.27 0000 --- --- --- --- 010266 00000 ------------ C 0.26 0.70 0.50 T 0.74 0.30 0.50 0000 --- --- --- --- 010326 00000 ------------ C 0.34 0.70 0.54 T 0.66 0.30 0.46 0000 --- --- --- --- 011386 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 011887 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 011935 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002595: T 004086: T 006887: AAT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000081 00000 ------------ T 1.00 0.97 0.98 C 0.00 0.03 0.02 0000 --- --- --- --- 000814 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001018 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 001197 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001257 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001258 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001281 00000 ------------ A 0.58 0.72 0.65 G 0.42 0.28 0.35 0000 --- --- --- --- 001453 00000 ------------ A 0.83 0.83 0.83 G 0.17 0.17 0.17 0000 --- --- --- --- 001497 00000 ------------ C 0.88 0.88 0.88 T 0.12 0.12 0.12 0000 --- --- --- --- 001780 00000 ------------ - 0.58 0.71 0.64 + 0.42 0.29 0.36 0000 --- --- --- --- 001836 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001938 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002339 00000 ------------ T 0.98 0.71 0.86 C 0.02 0.29 0.14 0000 --- --- --- --- 002377 00000 ------------ A 0.58 0.75 0.66 C 0.42 0.25 0.34 0000 --- --- --- --- 002459 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 002627 00000 ------------ C 1.00 0.86 0.93 G 0.00 0.14 0.07 0000 --- --- --- --- 002698 00000 ------------ G 0.97 0.69 0.82 A 0.03 0.31 0.17 0000 --- --- --- --- 002953 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002955 00000 ------------ G 0.86 1.00 0.94 A 0.14 0.00 0.06 0000 --- --- --- --- 003268 00000 ------------ T 0.85 0.88 0.87 A 0.15 0.12 0.13 0000 --- --- --- --- 003274 00000 ------------ C 0.92 0.76 0.82 A 0.08 0.24 0.18 0000 --- --- --- --- 003368 00000 ------------ A 0.83 0.85 0.84 T 0.17 0.15 0.16 0000 --- --- --- --- 003486 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 003522 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 003643 00000 ------------ G 0.85 0.87 0.86 T 0.15 0.13 0.14 0000 --- --- --- --- 004270 00000 ------------ - 0.23 0.11 0.17 + 0.77 0.89 0.83 0000 --- --- --- --- 004375 00000 ------------ - 0.17 0.15 0.16 + 0.83 0.85 0.84 0000 --- --- --- --- 005091 00000 ------------ G 0.58 0.72 0.65 A 0.42 0.28 0.35 0000 --- --- --- --- 005195 00000 ------------ G 0.56 0.83 0.69 C 0.44 0.17 0.31 0000 --- --- --- --- 005438 00000 ------------ A 0.85 0.85 0.85 T 0.15 0.15 0.15 0000 --- --- --- --- 012804 00000 ------------ G 0.96 0.76 0.88 T 0.04 0.24 0.12 0000 --- --- --- --- 013142 00000 ------------ C 0.90 0.70 0.80 T 0.10 0.30 0.20 0000 --- --- --- --- 013291 00000 ------------ - 0.65 0.34 0.50 + 0.35 0.66 0.50 0000 --- --- --- --- 013300 00000 ------------ - 1.00 0.91 0.96 + 0.00 0.09 0.04 0000 --- --- --- --- 013855 00000 ------------ A 1.00 0.83 0.91 T 0.00 0.17 0.09 0000 --- --- --- --- 013873 00000 ------------ C 0.63 0.85 0.74 A 0.37 0.15 0.26 0000 --- --- --- --- 014126 00000 ------------ C 0.83 0.65 0.74 T 0.17 0.35 0.26 0000 --- --- --- --- 014165 00000 ------------ T 0.96 0.67 0.82 C 0.04 0.33 0.18 0000 --- --- --- --- 014197 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 014316 00000 ------------ G 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 026200 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026279 00000 ------------ C 0.94 0.84 0.89 T 0.06 0.16 0.11 0000 --- --- --- --- 026424 00000 ------------ - 0.00 0.09 0.04 + 1.00 0.91 0.96 0000 --- --- --- --- 027204 00000 ------------ A 0.71 0.48 0.60 G 0.29 0.52 0.40 0000 --- --- --- --- 027386 00000 ------------ G 0.91 0.84 0.88 A 0.09 0.16 0.12 0000 --- --- --- --- 027400 00000 ------------ C 0.95 0.66 0.81 G 0.05 0.34 0.19 0000 --- --- --- --- 027484 00000 ------------ A 0.91 0.98 0.94 G 0.09 0.02 0.06 0000 --- --- --- --- 027555 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 027696 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027935 00000 ------------ G 0.75 0.48 0.61 A 0.25 0.52 0.39 0000 --- --- --- --- 027978 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 028141 00000 ------------ C 0.74 0.80 0.77 T 0.26 0.20 0.23 0000 --- --- --- --- 036626 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 036652 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036681 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 036812 00000 ------------ T 0.73 0.78 0.76 C 0.27 0.22 0.24 0000 --- --- --- --- 036924 00000 ------------ - 0.75 0.80 0.77 + 0.25 0.20 0.23 0000 --- --- --- --- 037347 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037402 00000 ------------ G 0.92 0.87 0.89 A 0.08 0.13 0.11 0000 --- --- --- --- 037420 00000 ------------ G 1.00 0.87 0.94 C 0.00 0.13 0.06 0000 --- --- --- --- 037597 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 037913 00000 ------------ C 0.90 0.98 0.94 T 0.10 0.02 0.06 0000 --- --- --- --- 038203 00000 ------------ A 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 038362 00000 ------------ A 0.75 0.80 0.78 G 0.25 0.20 0.22 0000 --- --- --- --- 038873 00000 ------------ A 0.90 0.83 0.86 G 0.10 0.17 0.14 0000 --- --- --- --- 038913 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 039042 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 039127 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 039202 00000 ------------ C 0.90 0.91 0.90 T 0.10 0.09 0.10 0000 --- --- --- --- 039229 00000 ------------ C 0.73 0.77 0.75 G 0.27 0.23 0.25 0000 --- --- --- --- 039434 00000 ------------ A 0.75 0.80 0.77 G 0.25 0.20 0.23 0000 --- --- --- --- 039596 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 039624 00000 ------------ T 0.91 0.97 0.94 A 0.09 0.03 0.06 0000 --- --- --- --- 039668 00000 ------------ A 0.73 0.79 0.76 G 0.27 0.21 0.24 0000 --- --- --- --- 046760 00000 ------------ A 0.75 0.80 0.78 G 0.25 0.20 0.22 0000 --- --- --- --- 046984 00000 ------------ G 0.75 0.80 0.78 T 0.25 0.20 0.22 0000 --- --- --- --- 047573 00000 ------------ A 0.72 0.78 0.75 G 0.28 0.22 0.25 0000 --- --- --- --- 048104 00000 ------------ G 0.89 0.82 0.85 A 0.11 0.18 0.15 0000 --- --- --- --- 048115 00000 ------------ C 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 048145 00000 ------------ G 0.82 0.82 0.82 A 0.18 0.18 0.18 0000 --- --- --- --- 048751 00000 ------------ A 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 048851 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 048860 00000 ------------ C 0.98 0.72 0.85 T 0.02 0.28 0.15 0000 --- --- --- --- 048996 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 049204 00000 ------------ C 0.90 0.83 0.87 A 0.10 0.17 0.13 0000 --- --- --- --- 049235 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 049429 00000 ------------ G 0.75 0.80 0.78 A 0.25 0.20 0.22 0000 --- --- --- --- 049524 00000 ------------ C 0.75 0.80 0.78 T 0.25 0.20 0.22 0000 --- --- --- --- 049527 00000 ------------ G 0.75 0.80 0.78 C 0.25 0.20 0.22 0000 --- --- --- --- 049579 00000 ------------ C 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 049595 00000 ------------ C 0.91 0.83 0.87 T 0.09 0.17 0.13 0000 --- --- --- --- 049755 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 052399 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 052404 00000 ------------ A 0.92 0.86 0.89 G 0.08 0.14 0.11 0000 --- --- --- --- 052433 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 052747 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 053028 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 053253 00000 ------------ C 0.92 0.83 0.87 T 0.08 0.17 0.13 0000 --- --- --- --- 053536 00000 ------------ G 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 053763 00000 ------------ T 0.73 0.74 0.73 A 0.27 0.26 0.27 0000 --- --- --- --- 053770 00000 ------------ C 0.91 0.83 0.87 T 0.09 0.17 0.13 0000 --- --- --- --- 053804 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 053831 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 054139 00000 ------------ A 1.00 0.87 0.93 G 0.00 0.13 0.07 0000 --- --- --- --- 054210 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 054514 00000 ------------ A 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 054599 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 054932 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 066097 00000 ------------ A 0.72 0.74 0.73 C 0.28 0.26 0.27 0000 --- --- --- --- 066401 00000 ------------ C 0.85 0.84 0.84 T 0.15 0.16 0.16 0000 --- --- --- --- 066411 00000 ------------ C 0.78 0.78 0.78 T 0.22 0.22 0.22 0000 --- --- --- --- 066482 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 066689 00000 ------------ - 0.09 0.16 0.12 + 0.91 0.84 0.88 0000 --- --- --- --- 066756 00000 ------------ A 0.85 0.91 0.88 G 0.15 0.09 0.12 0000 --- --- --- --- 067214 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 067522 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 067536 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 067549 00000 ------------ C 0.74 0.75 0.74 T 0.26 0.25 0.26 0000 --- --- --- --- 067726 00000 ------------ C 0.97 0.93 0.95 T 0.03 0.07 0.05 0000 --- --- --- --- 067920 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 068012 00000 ------------ T 0.82 0.91 0.87 C 0.18 0.09 0.13 0000 --- --- --- --- 068126 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 068307 00000 ------------ G 0.69 0.75 0.72 T 0.31 0.25 0.28 0000 --- --- --- --- 068339 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 068358 00000 ------------ C 0.85 0.82 0.84 A 0.15 0.17 0.16 0000 --- --- --- --- 068365 00000 ------------ G 0.85 0.82 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 068463 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 071352 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 071465 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 071606 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 071831 00000 ------------ G 0.85 0.87 0.86 A 0.15 0.13 0.14 0000 --- --- --- --- 071967 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 072069 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 072096 00000 ------------ T 0.86 0.81 0.84 C 0.14 0.19 0.16 0000 --- --- --- --- 072214 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 074215 00000 ------------ - 0.61 0.61 0.61 + 0.39 0.39 0.39 0000 --- --- --- --- 074795 00000 ------------ - 0.08 0.25 0.16 + 0.92 0.75 0.84 0000 --- --- --- --- 074820 00000 ------------ - 0.15 0.00 0.09 + 0.85 1.00 0.91 0000 --- --- --- --- 074950 00000 ------------ G 0.93 0.77 0.84 A 0.07 0.23 0.16 0000 --- --- --- --- 075718 00000 ------------ A 0.73 0.97 0.84 G 0.27 0.03 0.16 0000 --- --- --- --- 075938 00000 ------------ - 0.00 0.10 0.05 + 1.00 0.90 0.95 0000 --- --- --- --- 075959 00000 ------------ T 0.39 0.68 0.52 C 0.61 0.33 0.48 0000 --- --- --- --- 075997 00000 ------------ T 0.39 0.68 0.52 A 0.61 0.32 0.48 0000 --- --- --- --- 076000 00000 ------------ C 0.39 0.68 0.52 T 0.61 0.32 0.48 0000 --- --- --- --- 076012 00000 ------------ G 0.38 0.68 0.53 A 0.62 0.32 0.47 0000 --- --- --- --- 076133 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 076391 00000 ------------ A 0.38 0.68 0.53 G 0.62 0.32 0.47 0000 --- --- --- --- 076747 00000 ------------ G 0.89 0.76 0.83 T 0.11 0.24 0.17 0000 --- --- --- --- 077159 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 077262 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 077538 00000 ------------ G 0.90 0.76 0.83 T 0.10 0.24 0.17 0000 --- --- --- --- 078042 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 078100 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 078613 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 078694 00000 ------------ G 0.84 0.90 0.87 A 0.16 0.10 0.13 0000 --- --- --- --- 078706 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 078830 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 079008 00000 ------------ A 0.76 0.82 0.79 T 0.24 0.18 0.21 0000 --- --- --- --- 079118 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 079155 00000 ------------ G 0.52 0.73 0.62 A 0.48 0.27 0.38 0000 --- --- --- --- 079169 00000 ------------ G 0.87 0.52 0.70 A 0.13 0.48 0.30 0000 --- --- --- --- 079651 00000 ------------ G 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 079653 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 079658 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 079691 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 079707 00000 ------------ T 0.76 0.30 0.53 C 0.24 0.70 0.47 0000 --- --- --- --- 079749 00000 ------------ C 0.89 0.76 0.83 T 0.11 0.24 0.17 0000 --- --- --- --- 080837 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 081074 00000 ------------ G 0.98 0.86 0.92 A 0.02 0.14 0.08 0000 --- --- --- --- 081084 00000 ------------ T 0.91 0.52 0.72 G 0.09 0.48 0.28 0000 --- --- --- --- 081300 00000 ------------ C 0.73 0.98 0.85 G 0.27 0.02 0.15 0000 --- --- --- --- 081301 00000 ------------ G 0.89 0.52 0.70 A 0.11 0.48 0.30 0000 --- --- --- --- 081803 00000 ------------ T 0.71 0.98 0.84 G 0.29 0.02 0.16 0000 --- --- --- --- 082787 00000 ------------ C 0.65 0.98 0.82 T 0.35 0.02 0.18 0000 --- --- --- --- 083016 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 083072 00000 ------------ C 0.94 0.91 0.93 T 0.06 0.09 0.07 0000 --- --- --- --- 083139 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 083270 00000 ------------ C 0.88 0.52 0.70 T 0.12 0.48 0.30 0000 --- --- --- --- 083485 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 083486 00000 ------------ G 0.73 0.83 0.78 A 0.27 0.17 0.22 0000 --- --- --- --- 083509 00000 ------------ A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 092506 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 092712 00000 ------------ A 0.98 0.86 0.92 G 0.02 0.14 0.08 0000 --- --- --- --- 092897 00000 ------------ G 0.94 0.84 0.89 A 0.06 0.16 0.11 0000 --- --- --- --- 092939 00000 ------------ C 0.88 0.48 0.68 T 0.12 0.52 0.32 0000 --- --- --- --- 093065 00000 ------------ A 0.94 0.76 0.85 G 0.06 0.24 0.15 0000 --- --- --- --- 093106 00000 ------------ A 0.73 0.84 0.78 C 0.27 0.16 0.22 0000 --- --- --- --- 093302 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 093758 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 094406 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 094511 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 094880 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 095505 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 095548 00000 ------------ G 0.73 0.84 0.78 A 0.27 0.16 0.22 0000 --- --- --- --- 099341 00000 ------------ C 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 099599 00000 ------------ C 0.88 0.52 0.70 T 0.12 0.48 0.30 0000 --- --- --- --- 099649 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 099706 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 100132 00000 ------------ C 0.74 0.86 0.80 T 0.26 0.14 0.20 0000 --- --- --- --- 100192 00000 ------------ - 0.06 0.24 0.15 + 0.94 0.76 0.85 0000 --- --- --- --- 100336 00000 ------------ C 0.81 0.28 0.55 T 0.19 0.72 0.45 0000 --- --- --- --- 100564 00000 ------------ T 0.94 0.83 0.88 C 0.06 0.17 0.12 0000 --- --- --- --- 100711 00000 ------------ C 0.81 0.28 0.55 T 0.19 0.72 0.45 0000 --- --- --- --- 100838 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 100939 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 101142 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 101211 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 101340 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 101637 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 101643 00000 ------------ T 0.83 0.91 0.87 C 0.17 0.09 0.13 0000 --- --- --- --- 101664 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 101718 00000 ------------ C 0.67 0.98 0.82 A 0.33 0.02 0.18 0000 --- --- --- --- 101814 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 102510 02616 SYNON C 0.85 1.00 0.92 G 0.15 0.00 0.08 0748 CCC CCG PRO(P) PRO(P) 102996 03102 SYNON C 0.98 1.00 0.99 A 0.02 0.00 0.01 0910 CCC CCA PRO(P) PRO(P) 103222 03328 NON-SYN G 0.98 0.85 0.91 T 0.02 0.15 0.09 0986 GCC TCC ALA(A) SER(S) 103234 03340 NON-SYN A 0.98 0.98 0.98 G 0.02 0.02 0.02 0990 AGG GGG ARG(R) GLY(G) 103297 03403 NON-SYN C 0.67 0.98 0.82 G 0.33 0.02 0.18 1011 CAG GAG GLN(Q) GLU(E) 103563 03669 3' UTR T 0.67 0.98 0.82 A 0.33 0.02 0.18 0000 --- --- --- --- 103684 03790 3' UTR - 0.94 0.74 0.84 + 0.06 0.26 0.16 0000 --- --- --- --- 103895 04001 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 104078 04184 3' UTR G 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 104101 04207 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 104519 04625 3' UTR A 0.88 0.57 0.73 G 0.12 0.43 0.27 0000 --- --- --- --- 104597 04703 3' UTR C 0.73 0.80 0.76 T 0.27 0.20 0.24 0000 --- --- --- --- 104702 04808 3' UTR T 0.81 0.30 0.56 C 0.19 0.70 0.44 0000 --- --- --- --- 104739 04845 3' UTR A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 104952 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 105356 00000 ------------ G 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 105405 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 106191 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 106346 00000 ------------ C 0.70 0.98 0.83 T 0.30 0.02 0.17 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001780: AACA 004270: AT 004375: AG 013291: CCT 013300: ACTTCCTGCTCCTCCTCCTCCT 026424: TATTTT 027555: A 036924: AGA 066689: A 067536: G 067920: T 071352: A 071465: A 074215: AGAA 074795: CTT 074820: TT 075938: GT 079691: TTTC 100192: AT 103684: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000980 00000 ------------ T 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 001026 00000 ------------ T 0.86 0.95 0.90 C 0.14 0.05 0.10 0000 --- --- --- --- 001199 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001225 00000 ------------ A 0.66 0.71 0.69 G 0.34 0.29 0.31 0000 --- --- --- --- 001536 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001739 00000 ------------ C 0.98 0.70 0.84 T 0.02 0.30 0.16 0000 --- --- --- --- 001980 00000 ------------ T 0.55 0.72 0.64 A 0.45 0.28 0.36 0000 --- --- --- --- 002049 00049 5' UTR C 0.71 0.72 0.72 T 0.29 0.28 0.28 0000 --- --- --- --- 002212 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 002219 00000 ------------ G 0.54 0.83 0.68 A 0.46 0.17 0.32 0000 --- --- --- --- 002277 00000 ------------ A 0.96 0.50 0.73 G 0.04 0.50 0.27 0000 --- --- --- --- 002347 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002370 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003032 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003076 00000 ------------ G 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 003131 00000 ------------ G 0.78 1.00 0.88 C 0.22 0.00 0.12 0000 --- --- --- --- 003173 00000 ------------ G 0.63 0.95 0.79 C 0.37 0.05 0.21 0000 --- --- --- --- 003211 00000 ------------ A 0.85 0.73 0.79 C 0.15 0.27 0.21 0000 --- --- --- --- 003301 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 004286 00000 ------------ T 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 004524 00000 ------------ C 0.77 0.81 0.79 A 0.23 0.19 0.21 0000 --- --- --- --- 004870 00000 ------------ - 0.38 0.05 0.22 + 0.62 0.95 0.78 0000 --- --- --- --- 005101 00000 ------------ T 0.54 0.72 0.63 C 0.46 0.28 0.37 0000 --- --- --- --- 005247 00000 ------------ T 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 005268 00000 ------------ A 0.54 0.72 0.63 G 0.46 0.28 0.37 0000 --- --- --- --- 005380 00000 ------------ G 0.67 0.80 0.73 A 0.33 0.20 0.27 0000 --- --- --- --- 005383 00000 ------------ T 0.54 0.74 0.64 C 0.46 0.26 0.36 0000 --- --- --- --- 005591 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 005922 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005986 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 006256 00000 ------------ C 0.96 0.50 0.74 T 0.04 0.50 0.26 0000 --- --- --- --- 006508 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008130 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008287 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008306 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008472 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008532 00000 ------------ T 0.80 0.74 0.77 C 0.20 0.26 0.23 0000 --- --- --- --- 008654 00000 ------------ A 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 008780 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 008998 00000 ------------ T 0.78 0.69 0.74 C 0.22 0.31 0.26 0000 --- --- --- --- 009046 00000 ------------ A 0.94 0.50 0.73 G 0.06 0.50 0.27 0000 --- --- --- --- 009154 00000 ------------ A 0.88 0.75 0.82 G 0.12 0.25 0.18 0000 --- --- --- --- 009186 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009356 00000 ------------ T 0.96 0.86 0.91 A 0.04 0.14 0.09 0000 --- --- --- --- 009631 00000 ------------ C 0.62 0.96 0.79 T 0.38 0.04 0.21 0000 --- --- --- --- 009661 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009803 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 010147 00000 ------------ T 0.96 0.50 0.73 A 0.04 0.50 0.27 0000 --- --- --- --- 010367 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010444 00000 ------------ A 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 010803 00000 ------------ T 0.92 0.80 0.86 C 0.08 0.20 0.14 0000 --- --- --- --- 010832 00000 ------------ G 0.96 0.50 0.74 A 0.04 0.50 0.26 0000 --- --- --- --- 011164 00000 ------------ C 1.00 0.84 0.92 T 0.00 0.16 0.08 0000 --- --- --- --- 011283 00000 ------------ A 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 011428 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011959 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 012186* 012187 00000 ------------ G 0.90 0.76 0.84 A 0.10 0.24 0.16 0000 --- --- --- --- 012574 00000 ------------ A 0.83 0.97 0.90 G 0.17 0.03 0.10 0000 --- --- --- --- 013263 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 013727 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 014282 00000 ------------ A 0.83 0.95 0.90 G 0.17 0.05 0.10 0000 --- --- --- --- 014838 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015565 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 016026 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 016607 00000 ------------ A 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 016747 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 017223 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 017257 00000 ------------ A 0.92 0.79 0.86 T 0.08 0.21 0.14 0000 --- --- --- --- 017296 00000 ------------ T 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 017406 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 017426 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018047 00000 ------------ C 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 018305 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 018633 00000 ------------ C 0.78 0.80 0.79 T 0.22 0.20 0.21 0000 --- --- --- --- 018799 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019080 00794 SYNON C 0.98 1.00 0.99 A 0.02 0.00 0.01 0242 ATC ATA ILE(I) ILE(I) 019384 00000 ------------ G 0.95 0.92 0.94 C 0.05 0.08 0.06 0000 --- --- --- --- 019581 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 020098 00000 ------------ - 0.23 0.20 0.22 + 0.77 0.80 0.78 0000 --- --- --- --- 020726 00000 ------------ - 0.02 0.09 0.06 + 0.98 0.91 0.94 0000 --- --- --- --- 021219 00000 ------------ A 0.60 0.95 0.77 G 0.40 0.05 0.23 0000 --- --- --- --- 021798 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021929 00000 ------------ A 0.83 1.00 0.92 G 0.17 0.00 0.08 0000 --- --- --- --- 022603 00000 ------------ G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 023327 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023391 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023485 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023502 00000 ------------ T 0.92 0.87 0.90 C 0.08 0.13 0.10 0000 --- --- --- --- 023697 00000 ------------ C 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 023816 00000 ------------ T 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 023916 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 024007 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024416 01235 SYNON C 0.91 0.80 0.86 T 0.09 0.20 0.14 0389 GAC GAT ASP(D) ASP(D) 024655 00000 ------------ A 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 024727 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024764 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 025713 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 025742 00000 ------------ A 0.71 0.80 0.76 G 0.29 0.20 0.24 0000 --- --- --- --- 025791 00000 ------------ A 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 026050 00000 ------------ T 0.91 0.82 0.87 C 0.09 0.18 0.13 0000 --- --- --- --- 026298 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026481 00000 ------------ T 0.71 0.81 0.76 C 0.29 0.19 0.24 0000 --- --- --- --- 026963 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 027026 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027219 01323 SYNON C 0.83 1.00 0.91 T 0.17 0.00 0.09 0419 CTG TTG LEU(L) LEU(L) 027525 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 028112 00000 ------------ A 0.98 0.86 0.92 C 0.02 0.14 0.08 0000 --- --- --- --- 028301 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 028506 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029237 00000 ------------ C 0.96 0.50 0.73 T 0.04 0.50 0.27 0000 --- --- --- --- 029501 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 029603 00000 ------------ C 0.96 0.50 0.73 T 0.04 0.50 0.27 0000 --- --- --- --- 029753 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030099 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 030337 00000 ------------ G 0.90 0.37 0.64 A 0.10 0.63 0.36 0000 --- --- --- --- 030338 00000 ------------ C 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 030448 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 030493 00000 ------------ A 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 030549 00000 ------------ - 0.96 0.87 0.91 + 0.04 0.13 0.09 0000 --- --- --- --- 030762 00000 ------------ C 0.38 0.76 0.56 T 0.62 0.24 0.44 0000 --- --- --- --- 031253 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031826 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032047 00000 ------------ G 0.92 0.80 0.86 A 0.08 0.20 0.14 0000 --- --- --- --- 032150 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 032157 00000 ------------ A 0.35 0.70 0.55 C 0.65 0.30 0.45 0000 --- --- --- --- 032824 00000 ------------ G 0.93 0.93 0.93 A 0.07 0.07 0.07 0000 --- --- --- --- 032860 00000 ------------ C 0.90 1.00 0.96 T 0.10 0.00 0.04 0000 --- --- --- --- 033190 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 033451 00000 ------------ C 0.96 0.50 0.75 T 0.04 0.50 0.25 0000 --- --- --- --- 033529 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 033554 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033819 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 033953 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 034056 01544 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0492 CAC CAT HIS(H) HIS(H) 034257 00000 ------------ T 0.96 0.95 0.95 C 0.04 0.05 0.05 0000 --- --- --- --- 035148 00000 ------------ A 0.77 0.81 0.79 G 0.23 0.19 0.21 0000 --- --- --- --- 035163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035311 00000 ------------ T 0.96 0.48 0.73 C 0.04 0.52 0.27 0000 --- --- --- --- 035974 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036079 00000 ------------ C 0.94 0.87 0.90 T 0.06 0.13 0.10 0000 --- --- --- --- 036234 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 036623 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036661 00000 ------------ - 0.04 0.05 0.04 + 0.96 0.95 0.96 0000 --- --- --- --- 036728 00000 ------------ - 0.05 0.07 0.06 + 0.95 0.93 0.94 0000 --- --- --- --- 036798 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 036868 00000 ------------ C 0.77 0.90 0.84 A 0.23 0.10 0.16 0000 --- --- --- --- 036998 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004870: C 020098: CATA 020726: CT 030549: TT 036661: CTC 036728: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 012186 A 0.98 0.97 0.97 G 0.00 0.03 0.01 T 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000225 00000 ------------ A 0.98 0.87 0.92 G 0.02 0.13 0.08 0000 --- --- --- --- 000589 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 000696 00000 ------------ - 0.65 0.65 0.65 + 0.35 0.35 0.35 0000 --- --- --- --- 000732 00000 ------------ C 0.76 0.87 0.82 A 0.24 0.13 0.18 0000 --- --- --- --- 000772 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000914 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 001181 00000 ------------ A 0.70 0.66 0.68 C 0.30 0.34 0.32 0000 --- --- --- --- 001435 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001442 00000 ------------ T 0.91 0.82 0.87 A 0.09 0.18 0.13 0000 --- --- --- --- 001502 00000 ------------ T 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001518 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001665 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002075 00000 ------------ A 0.98 0.89 0.93 G 0.02 0.11 0.07 0000 --- --- --- --- 002163 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002263 00000 ------------ - 0.96 0.80 0.88 + 0.04 0.20 0.12 0000 --- --- --- --- 002348 00000 ------------ A 0.91 0.83 0.87 G 0.09 0.17 0.13 0000 --- --- --- --- 002378 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002549 00000 ------------ G 0.92 0.83 0.87 A 0.08 0.17 0.13 0000 --- --- --- --- 002693 00000 ------------ A 0.98 0.87 0.92 T 0.02 0.13 0.08 0000 --- --- --- --- 003080 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003379 00000 ------------ G 0.90 0.83 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 003469 00000 ------------ G 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 003701 00000 ------------ A 0.62 0.70 0.66 G 0.38 0.30 0.34 0000 --- --- --- --- 003802 00000 ------------ G 0.88 0.83 0.85 A 0.12 0.17 0.15 0000 --- --- --- --- 004203 00000 ------------ G 0.76 0.43 0.59 A 0.24 0.57 0.41 0000 --- --- --- --- 004755 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 004922 00000 ------------ C 0.71 0.87 0.79 T 0.29 0.13 0.21 0000 --- --- --- --- 004944 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004970 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005022 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005054 00000 ------------ C 0.72 0.87 0.79 T 0.28 0.13 0.21 0000 --- --- --- --- 005127 00000 ------------ A 0.98 0.87 0.92 G 0.02 0.13 0.08 0000 --- --- --- --- 005222 00000 ------------ A 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 005252 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 005453 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005673 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 005936 00236 SYNON G 0.98 0.98 0.98 T 0.02 0.02 0.02 0052 GTG GTT VAL(V) VAL(V) 005970 00270 NON-SYN G 0.81 0.87 0.84 A 0.19 0.13 0.16 0064 GTC ATC VAL(V) ILE(I) 008005 01097 SYNON A 0.91 1.00 0.96 G 0.09 0.00 0.04 0339 CCA CCG PRO(P) PRO(P) 008052 01144 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0355 GGA GAA GLY(G) GLU(E) 008503 01595 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010003 00000 ------------ G 0.98 0.87 0.92 A 0.02 0.13 0.08 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000696: CAA 002263: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000295 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000331 00000 ------------ G 1.00 0.87 0.92 A 0.00 0.13 0.08 0000 --- --- --- --- 000463 00000 ------------ A 0.53 0.80 0.69 G 0.47 0.20 0.31 0000 --- --- --- --- 001086 00000 ------------ G 0.73 0.68 0.71 A 0.27 0.32 0.29 0000 --- --- --- --- 001132 00000 ------------ C 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 001591 00000 ------------ G 0.88 0.90 0.89 A 0.12 0.10 0.11 0000 --- --- --- --- 001781 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 002034 00000 ------------ T 0.69 0.72 0.70 C 0.31 0.28 0.30 0000 --- --- --- --- 002149 00000 ------------ - 0.80 0.91 0.86 + 0.20 0.09 0.14 0000 --- --- --- --- 002221 00000 ------------ T 0.67 0.72 0.70 G 0.33 0.28 0.30 0000 --- --- --- --- 002368 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002673 00000 ------------ T 0.65 0.72 0.68 C 0.35 0.28 0.32 0000 --- --- --- --- 002867 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002939 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003012 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003233 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003330 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003360 00000 ------------ G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 003369 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003434 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003676 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003852 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003894 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003995 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 004132 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006148 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006234 00000 ------------ - 0.79 0.67 0.73 + 0.21 0.33 0.27 0000 --- --- --- --- 006296 00000 ------------ G 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 006332 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 006353 00000 ------------ G 0.75 0.72 0.73 A 0.25 0.28 0.27 0000 --- --- --- --- 006923 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006958 00000 ------------ C 0.56 0.50 0.53 T 0.44 0.50 0.47 0000 --- --- --- --- 007154 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007173 00000 ------------ G 0.67 0.74 0.70 A 0.33 0.26 0.30 0000 --- --- --- --- 007209 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007270 00000 ------------ A 0.67 0.80 0.73 G 0.33 0.20 0.27 0000 --- --- --- --- 007323 00000 ------------ C 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 007395 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007428 00000 ------------ T 0.62 0.70 0.66 C 0.38 0.30 0.34 0000 --- --- --- --- 007429 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007552 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007559 00000 ------------ C 0.65 0.76 0.70 T 0.35 0.24 0.30 0000 --- --- --- --- 007574 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 007729 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 007963 00363 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0080 TGC TGT CYS(C) CYS(C) 008421 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 008528 00000 ------------ C 0.73 0.72 0.72 G 0.27 0.28 0.28 0000 --- --- --- --- 008641 00000 ------------ G 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 008678 00000 ------------ C 0.69 0.72 0.70 G 0.31 0.28 0.30 0000 --- --- --- --- 008814 00482 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0120 ACG ATG THR(T) MET(M) 009139 00702 SYNON A 0.62 0.72 0.67 G 0.38 0.28 0.33 0193 GGA GGG GLY(G) GLY(G) 009214 00000 ------------ - 0.40 0.48 0.44 + 0.60 0.52 0.56 0000 --- --- --- --- 009329 00000 ------------ C 0.92 0.85 0.88 T 0.08 0.15 0.12 0000 --- --- --- --- 009428 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009470 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009667 00000 ------------ T 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 009672 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009779 00915 3' UTR C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009976 01112 3' UTR G 0.66 0.72 0.69 A 0.34 0.28 0.31 0000 --- --- --- --- 009981 01117 3' UTR T 0.66 0.72 0.69 C 0.34 0.28 0.31 0000 --- --- --- --- 010099 01235 3' UTR T 0.65 0.72 0.68 C 0.35 0.28 0.32 0000 --- --- --- --- 010176 01312 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010191 01327 3' UTR G 0.67 0.76 0.71 C 0.33 0.24 0.29 0000 --- --- --- --- 010229 01365 3' UTR C 0.81 0.91 0.86 T 0.19 0.09 0.14 0000 --- --- --- --- 010279 01415 3' UTR T 0.69 0.83 0.76 C 0.31 0.17 0.24 0000 --- --- --- --- 010317 01453 3' UTR A 0.62 0.72 0.67 T 0.38 0.28 0.33 0000 --- --- --- --- 010399 00000 ------------ G 0.46 0.59 0.52 C 0.54 0.41 0.48 0000 --- --- --- --- 010468 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010515 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010583 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010635 00000 ------------ A 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010650 00000 ------------ C 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010684 00000 ------------ A 0.67 0.72 0.69 G 0.33 0.28 0.31 0000 --- --- --- --- 010712 00000 ------------ A 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010743 00000 ------------ C 0.62 0.72 0.67 G 0.38 0.28 0.33 0000 --- --- --- --- 010926 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011089 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011186 00000 ------------ G 0.65 0.75 0.70 A 0.35 0.25 0.30 0000 --- --- --- --- 011312 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 011582 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 011701 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011740 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 011783 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011810 00000 ------------ G 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 011823 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011827 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011878 00000 ------------ T 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 011922 00000 ------------ C 0.59 0.41 0.50 T 0.41 0.59 0.50 0000 --- --- --- --- 012036 00000 ------------ G 0.70 0.74 0.72 A 0.30 0.26 0.28 0000 --- --- --- --- 012138 00000 ------------ - 0.71 0.72 0.72 + 0.29 0.28 0.28 0000 --- --- --- --- 012139 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 012163 00000 ------------ G 0.70 0.71 0.70 C 0.30 0.29 0.30 0000 --- --- --- --- 012198 00000 ------------ A 0.70 0.74 0.72 T 0.30 0.26 0.28 0000 --- --- --- --- 012582 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012843 00000 ------------ G 0.92 0.85 0.88 C 0.08 0.15 0.12 0000 --- --- --- --- 013322 00000 ------------ C 0.75 0.79 0.77 G 0.25 0.21 0.23 0000 --- --- --- --- 013518 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 013958 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014102 00000 ------------ G 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 014119 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 014187 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 014190 00000 ------------ T 0.63 0.72 0.67 C 0.37 0.28 0.33 0000 --- --- --- --- 014213 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014242 00000 ------------ G 0.62 0.72 0.67 A 0.38 0.28 0.33 0000 --- --- --- --- 014270 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 014300 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014335 00000 ------------ G 0.71 0.80 0.76 A 0.29 0.20 0.24 0000 --- --- --- --- 014460 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014491 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002149: GGTC 006234: CTG 007729: ACCCCC 009214: GGT 010515: A 012138: C 014119: C 014270: TGGGCCTGTGCGTCCCGGGGCTCC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000106 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 000757 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000861 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 001021 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 001024 00000 ------------ A 0.82 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001272 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 001547 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001848 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 002162 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 002273 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002306 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 002387 00000 ------------ + 0.30 0.07 0.19 - 0.70 0.93 0.81 0000 --- --- --- --- 002521 00000 ------------ G 0.89 0.61 0.76 A 0.11 0.39 0.24 0000 --- --- --- --- 002638 00000 ------------ T 0.88 0.93 0.90 G 0.12 0.07 0.10 0000 --- --- --- --- 002652 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002890 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002996 00000 ------------ C 0.61 0.53 0.57 A 0.39 0.47 0.43 0000 --- --- --- --- 003094 00000 ------------ A 0.74 0.45 0.60 G 0.26 0.55 0.40 0000 --- --- --- --- 003157 00000 ------------ G 0.64 0.55 0.59 A 0.36 0.45 0.41 0000 --- --- --- --- 003304 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 003342 00000 ------------ + 0.20 0.00 0.10 - 0.80 1.00 0.90 0000 --- --- --- --- 003412 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 003691 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 003714 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 003991 00000 ------------ A 0.89 0.55 0.72 C 0.11 0.45 0.28 0000 --- --- --- --- 004134 00000 ------------ T 0.67 0.95 0.81 G 0.33 0.05 0.19 0000 --- --- --- --- 004180 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004249 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 004259 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004366 00000 ------------ A 0.85 0.54 0.70 T 0.15 0.46 0.30 0000 --- --- --- --- 004423 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004648 00000 ------------ C 0.72 0.54 0.63 A 0.28 0.46 0.37 0000 --- --- --- --- 004752 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004879 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004949 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004990 00000 ------------ C 0.71 0.93 0.82 T 0.29 0.07 0.18 0000 --- --- --- --- 004993 00000 ------------ A 0.60 0.52 0.56 G 0.40 0.48 0.44 0000 --- --- --- --- 005241 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006007 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007167 00000 ------------ G 0.67 0.48 0.57 A 0.33 0.52 0.43 0000 --- --- --- --- 007175 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007265 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007306 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007430 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007486 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007662 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007663 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007664 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007854 00000 ------------ G 0.54 0.52 0.53 A 0.46 0.48 0.47 0000 --- --- --- --- 007947 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 007988 00000 ------------ A 0.71 0.93 0.82 C 0.29 0.07 0.18 0000 --- --- --- --- 008152 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008426 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008583 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008595 00000 ------------ T 0.79 1.00 0.90 A 0.21 0.00 0.10 0000 --- --- --- --- 008796 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 009152 00000 ------------ + 0.86 1.00 0.93 - 0.14 0.00 0.07 0000 --- --- --- --- 009473 00000 ------------ T 0.77 0.53 0.66 C 0.23 0.47 0.34 0000 --- --- --- --- 009474 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009505 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009534 00000 ------------ C 0.62 0.48 0.56 T 0.38 0.52 0.44 0000 --- --- --- --- 009600 00000 ------------ A 0.39 0.93 0.65 G 0.61 0.07 0.35 0000 --- --- --- --- 009616 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 009663 00000 ------------ G 1.00 0.92 0.96 A 0.00 0.08 0.04 0000 --- --- --- --- 010381 00000 ------------ T 0.71 0.93 0.82 C 0.29 0.07 0.18 0000 --- --- --- --- 010420 00286 FRAME SHIFT + 0.98 1.00 0.99 - 0.02 0.00 0.01 0052 AAA --A --- --- 010425 EXON14 -1 SPLICE + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 010613 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010876 00000 ------------ A 0.96 0.95 0.96 G 0.04 0.05 0.04 0000 --- --- --- --- 011137 00000 ------------ + 0.91 1.00 0.95 - 0.09 0.00 0.05 0000 --- --- --- --- 011155 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 011472 00000 ------------ C 0.68 0.93 0.80 A 0.32 0.07 0.20 0000 --- --- --- --- 011554 00000 ------------ T 0.72 0.93 0.83 C 0.28 0.07 0.17 0000 --- --- --- --- 011684 00000 ------------ T 0.73 0.93 0.83 A 0.27 0.07 0.17 0000 --- --- --- --- 011741 00000 ------------ C 0.52 0.48 0.50 T 0.48 0.52 0.50 0000 --- --- --- --- 011890 00000 ------------ A 0.94 0.57 0.76 G 0.06 0.43 0.24 0000 --- --- --- --- 012124 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012145 00000 ------------ G 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 012269 00000 ------------ + 0.92 0.53 0.77 - 0.08 0.47 0.23 0000 --- --- --- --- 012403 00000 ------------ C 0.69 0.93 0.81 G 0.31 0.07 0.19 0000 --- --- --- --- 012775 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 012919 00000 ------------ A 0.57 0.55 0.56 G 0.43 0.45 0.44 0000 --- --- --- --- 012998 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 013094 00000 ------------ T 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 013346 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013388 00000 ------------ A 0.96 0.95 0.95 G 0.04 0.05 0.05 0000 --- --- --- --- 013528 00000 ------------ + 0.92 0.50 0.74 - 0.08 0.50 0.26 0000 --- --- --- --- 013577 00000 ------------ T 0.33 0.95 0.60 A 0.67 0.05 0.40 0000 --- --- --- --- 013758 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 013823 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013936 00000 ------------ C 0.60 0.43 0.51 T 0.40 0.57 0.49 0000 --- --- --- --- 013973 00000 ------------ G 0.93 0.50 0.71 A 0.07 0.50 0.29 0000 --- --- --- --- 014003 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014076 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 014081 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 014190 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014299 00000 ------------ A 0.73 0.93 0.83 G 0.27 0.07 0.17 0000 --- --- --- --- 014455 00000 ------------ A 0.92 0.52 0.73 T 0.08 0.48 0.27 0000 --- --- --- --- 014482 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014882 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 014903 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 015062 EXON14 +2 SPLICE T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015521 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015833 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 015932 00000 ------------ G 0.71 0.93 0.82 A 0.29 0.07 0.18 0000 --- --- --- --- 015975 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016040 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 016163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016385 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016565 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016568 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 016809 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016838 EXON14 -2 SPLICE A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016983 00705 SYNON G 1.00 0.95 0.98 A 0.00 0.05 0.02 0191 CCG CCA PRO(P) PRO(P) 017093 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 017282 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017418 00000 ------------ + 0.89 1.00 0.95 - 0.11 0.00 0.05 0000 --- --- --- --- 017461 00000 ------------ + 0.04 0.00 0.03 - 0.96 1.00 0.97 0000 --- --- --- --- 017743 00000 ------------ A 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 017800 00000 ------------ + 0.13 0.00 0.06 - 0.87 1.00 0.94 0000 --- --- --- --- 018358 00000 ------------ + 0.04 0.00 0.02 - 0.96 1.00 0.98 0000 --- --- --- --- 018457 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018463 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 018662 00000 ------------ T 0.77 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 018785 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018911 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018966 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019151 00000 ------------ A 0.70 1.00 0.82 G 0.30 0.00 0.18 0000 --- --- --- --- 019228 00000 ------------ A 0.96 0.94 0.95 C 0.04 0.06 0.05 0000 --- --- --- --- 019277 00000 ------------ + 0.02 0.36 0.18 - 0.98 0.64 0.82 0000 --- --- --- --- 019386 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 019877 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020028 00000 ------------ + 0.91 1.00 0.95 - 0.09 0.00 0.05 0000 --- --- --- --- 020277 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020440 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020630 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 020644 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 021005 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021110 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021111 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 021703 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021731 00000 ------------ + 0.06 0.02 0.04 - 0.94 0.98 0.96 0000 --- --- --- --- 021891 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 021927 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 022296 00000 ------------ C 0.79 0.55 0.68 G 0.21 0.45 0.32 0000 --- --- --- --- 022338 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022351 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022434 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022749 00000 ------------ C 0.78 0.54 0.66 T 0.22 0.46 0.34 0000 --- --- --- --- 022830 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023463 00000 ------------ T 0.81 0.50 0.65 C 0.19 0.50 0.35 0000 --- --- --- --- 023533 00000 ------------ G 0.88 0.50 0.70 A 0.12 0.50 0.30 0000 --- --- --- --- 023689 00000 ------------ G 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 024165 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 024166 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 024186 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 024426 00000 ------------ T 0.79 0.52 0.66 A 0.21 0.48 0.34 0000 --- --- --- --- 024427 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024685 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025025 01104 TRUNCATION T 0.92 1.00 0.96 G 0.08 0.00 0.04 0324 TAT TAG TYR(Y) *** 025054 01133 FRAME SHIFT + 1.00 0.98 0.99 - 0.00 0.02 0.01 0334 GAA G-- --- --- 025276 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025550 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 025580 00000 ------------ T 0.89 0.50 0.69 C 0.11 0.50 0.31 0000 --- --- --- --- 025695 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025794 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 025945 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026076 00000 ------------ G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 026089 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 026160 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026305 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026346 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026512 00000 ------------ C 0.75 0.60 0.68 A 0.25 0.40 0.32 0000 --- --- --- --- 026776 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026911 00000 ------------ + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 026927 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027003 00000 ------------ C 0.83 0.54 0.69 T 0.17 0.46 0.31 0000 --- --- --- --- 027041 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027418 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028302 01774 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028314 01786 3' UTR + 1.00 0.89 0.94 - 0.00 0.11 0.06 0000 --- --- --- --- 028375 00000 ------------ T 0.96 0.91 0.94 G 0.04 0.09 0.06 0000 --- --- --- --- 028423 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028685 00000 ------------ A 0.87 0.52 0.70 G 0.13 0.48 0.30 0000 --- --- --- --- 028947 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029225 00000 ------------ A 0.88 0.52 0.70 G 0.12 0.48 0.30 0000 --- --- --- --- 029894 00000 ------------ + 0.18 0.45 0.31 - 0.82 0.55 0.69 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002387: T 003342: A 003714: AA 009152: C 010420: AA 010425: G 011137: G 012269: GTT 013528: TGT 017418: TTACAATTTTAAT 017461: T 017800: TACTCAT 018358: TAAG 019277: TCAAACTGAGTCTATCTAATGATTGCTTT 020028: A 021731: GCCT 025054: AAG 026911: ATGGTTTTATGGTTTTATTTGAGCATTTGATAGCATC 028314: GCACAAATAAAGCACT 029894: GGGTTGAGA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000644 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 000887 00000 ------------ C 0.60 0.93 0.78 T 0.40 0.07 0.22 0000 --- --- --- --- 000914 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 000922 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 000943 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 000950 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003428 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003524 00000 ------------ C 0.74 0.70 0.72 T 0.26 0.30 0.28 0000 --- --- --- --- 003596 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 004125 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004265 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004679 00000 ------------ T 0.65 0.93 0.80 C 0.35 0.07 0.20 0000 --- --- --- --- 005027 00000 ------------ G 0.71 0.69 0.70 A 0.29 0.31 0.30 0000 --- --- --- --- 005625 00000 ------------ C 0.85 0.74 0.79 T 0.15 0.26 0.21 0000 --- --- --- --- 005723 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005775 00000 ------------ G 0.95 0.39 0.66 A 0.05 0.61 0.34 0000 --- --- --- --- 005812 00000 ------------ A 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 005829 00000 ------------ A 0.70 0.67 0.69 G 0.30 0.33 0.31 0000 --- --- --- --- 006048 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 006295 00000 ------------ G 0.61 1.00 0.80 A 0.39 0.00 0.20 0000 --- --- --- --- 006409 00000 ------------ T 0.94 0.39 0.67 C 0.06 0.61 0.33 0000 --- --- --- --- 006607 00000 ------------ C 0.95 0.39 0.57 T 0.05 0.61 0.43 0000 --- --- --- --- 007543 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 009355 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009372 00000 ------------ C 0.75 0.67 0.71 T 0.25 0.33 0.29 0000 --- --- --- --- 009678 00000 ------------ T 0.35 0.93 0.64 C 0.65 0.07 0.36 0000 --- --- --- --- 009836 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 010633 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010993 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011674 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 011687 00000 ------------ - 0.73 0.67 0.70 + 0.27 0.33 0.30 0000 --- --- --- --- 012000 00000 ------------ C 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 012111 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 012204 00000 ------------ G 0.73 0.69 0.71 A 0.27 0.31 0.29 0000 --- --- --- --- 012458 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012753 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 012759 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013121 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013183 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014229 00000 ------------ C 0.71 0.68 0.70 G 0.29 0.32 0.30 0000 --- --- --- --- 014682 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014868 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 015184 00000 ------------ C 0.90 0.41 0.66 T 0.10 0.59 0.34 0000 --- --- --- --- 015223 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015536 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015568 00000 ------------ C 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 015667 00000 ------------ T 0.80 0.93 0.87 A 0.20 0.07 0.13 0000 --- --- --- --- 017328 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 017338 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 017395 00000 ------------ A 0.76 0.93 0.85 G 0.24 0.07 0.15 0000 --- --- --- --- 018055 00000 ------------ T 0.80 0.92 0.85 C 0.20 0.08 0.15 0000 --- --- --- --- 018281 00000 ------------ G 0.69 0.56 0.63 C 0.31 0.44 0.37 0000 --- --- --- --- 018531 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 018994 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019171 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019375 00000 ------------ G 0.81 0.43 0.62 A 0.19 0.57 0.38 0000 --- --- --- --- 019405 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019616 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 019700 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019705 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019804 00000 ------------ A 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 020356 00000 ------------ C 0.81 0.43 0.61 T 0.19 0.57 0.39 0000 --- --- --- --- 020480 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 020687 00000 ------------ C 0.66 0.57 0.61 T 0.34 0.43 0.39 0000 --- --- --- --- 020699 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 021245 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021615 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 021983 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 022162 00000 ------------ T 0.82 1.00 0.92 C 0.18 0.00 0.08 0000 --- --- --- --- 022967 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 022979 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023854 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 023856 00000 ------------ A 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 023888 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 023948 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024058 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024121 00000 ------------ - 0.18 0.00 0.09 + 0.82 1.00 0.91 0000 --- --- --- --- 024311 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 024550 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 024565 00000 ------------ C 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 024677 00000 ------------ G 0.64 0.54 0.59 C 0.36 0.46 0.41 0000 --- --- --- --- 025097 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 025131 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 025205 00000 ------------ G 0.93 0.52 0.72 A 0.07 0.48 0.28 0000 --- --- --- --- 025221 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025254 00000 ------------ G 0.88 1.00 0.95 A 0.12 0.00 0.05 0000 --- --- --- --- 025277 00000 ------------ G 0.57 0.48 0.51 A 0.43 0.52 0.49 0000 --- --- --- --- 025293 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 025403 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 025572 00000 ------------ C 0.78 1.00 0.90 T 0.22 0.00 0.10 0000 --- --- --- --- 026079 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026238 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 026741 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 027252 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028166 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 028266 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028274 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 028351 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 028919 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028920 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029408 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 029547 00000 ------------ G 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 029621 00000 ------------ G 0.65 0.54 0.60 T 0.35 0.46 0.40 0000 --- --- --- --- 029654 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029761 00000 ------------ A 0.84 1.00 0.93 G 0.16 0.00 0.07 0000 --- --- --- --- 029797 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 029798 00000 ------------ A 0.83 1.00 0.93 C 0.17 0.00 0.07 0000 --- --- --- --- 030242 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 030291 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 030341 00000 ------------ G 0.79 0.47 0.65 A 0.21 0.53 0.35 0000 --- --- --- --- 030359 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031004 00000 ------------ T 0.81 0.48 0.65 C 0.19 0.52 0.35 0000 --- --- --- --- 031033 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 031250 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 031260 00000 ------------ G 0.82 1.00 0.92 C 0.18 0.00 0.08 0000 --- --- --- --- 031499 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 032226 00000 ------------ C 0.83 0.48 0.67 T 0.17 0.52 0.33 0000 --- --- --- --- 032233 00000 ------------ G 0.96 0.74 0.86 A 0.04 0.26 0.14 0000 --- --- --- --- 032463 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 032758 00000 ------------ T 0.65 0.57 0.61 C 0.35 0.43 0.39 0000 --- --- --- --- 033437 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033568 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033682 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 033869 00000 ------------ A 0.74 0.45 0.59 G 0.26 0.55 0.41 0000 --- --- --- --- 034138 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034438 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 034611 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 034647 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 035291 00000 ------------ G 0.67 0.57 0.62 T 0.33 0.43 0.38 0000 --- --- --- --- 035426 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 035493 00000 ------------ C 0.75 0.95 0.84 T 0.25 0.05 0.16 0000 --- --- --- --- 035911 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 036544 00000 ------------ G 0.91 0.50 0.72 A 0.09 0.50 0.28 0000 --- --- --- --- 036549 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 036756 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036871 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 037194 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037195 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 037450 00000 ------------ A 0.87 0.46 0.66 G 0.13 0.54 0.34 0000 --- --- --- --- 037513 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 037569 00000 ------------ C 0.54 0.54 0.54 T 0.46 0.46 0.46 0000 --- --- --- --- 037617 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 037644 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 038126 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 038154 00000 ------------ C 0.60 0.55 0.58 A 0.40 0.45 0.42 0000 --- --- --- --- 038219 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 038343 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038367 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 038442 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 038757 00000 ------------ C 0.71 0.48 0.60 T 0.29 0.52 0.40 0000 --- --- --- --- 038848 00000 ------------ C 0.86 0.46 0.66 T 0.14 0.54 0.34 0000 --- --- --- --- 038850 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 039236 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 039257 00000 ------------ G 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 040239 00000 ------------ - 0.35 0.52 0.43 + 0.65 0.48 0.57 0000 --- --- --- --- 040265 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 040309* 040512 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 040517 00000 ------------ G 0.67 0.48 0.58 A 0.33 0.52 0.42 0000 --- --- --- --- 040721 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 040932 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 040971 00000 ------------ C 0.88 0.48 0.68 T 0.12 0.52 0.32 0000 --- --- --- --- 041230 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011687: TCT 024121: GA 025131: G 029797: C 031250: CTC 033682: A 038367: C 040239: G The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 040309 C 0.76 1.00 0.88 G 0.02 0.00 0.01 T 0.22 0.00 0.11 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000040 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000220 00000 ------------ A 0.77 0.98 0.87 G 0.23 0.02 0.13 0000 --- --- --- --- 000586 00000 ------------ G 0.93 0.61 0.76 T 0.07 0.39 0.24 0000 --- --- --- --- 000587 00000 ------------ C 0.92 0.59 0.74 T 0.08 0.41 0.26 0000 --- --- --- --- 001643 -----** SYNON C 0.83 0.54 0.69 T 0.17 0.46 0.31 0147 GCC GCT ALA(A) ALA(A) 001785 -----** NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0195 GGC AGC GLY(G) SER(S) 002876 00000 ------------ A 0.52 0.96 0.73 T 0.48 0.04 0.27 0000 --- --- --- --- 002884 00000 ------------ - 0.52 0.96 0.73 + 0.48 0.04 0.27 0000 --- --- --- --- 002948 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003077 00000 ------------ - 1.00 0.91 0.96 + 0.00 0.09 0.04 0000 --- --- --- --- 003259 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 003693 00000 ------------ C 0.50 0.96 0.72 T 0.50 0.04 0.28 0000 --- --- --- --- 004446 00000 ------------ T 0.50 0.96 0.72 C 0.50 0.04 0.28 0000 --- --- --- --- 004962 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005010 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002884: T 003077: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000251 00000 ------------ A 0.79 1.00 0.90 T 0.21 0.00 0.10 0000 --- --- --- --- 000957 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 001029 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001225 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001475 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001501 00000 ------------ A 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 001555 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001738 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 001783 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001866 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 001888 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001927 00000 ------------ C 0.70 1.00 0.83 A 0.30 0.00 0.17 0000 --- --- --- --- 002359 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 002999 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 003029 00000 ------------ - 0.77 1.00 0.88 + 0.23 0.00 0.12 0000 --- --- --- --- 003097 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003434 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003479 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003743 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003912 00000 ------------ A 0.96 0.48 0.72 G 0.04 0.52 0.28 0000 --- --- --- --- 003975 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004211 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004319 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 004324 00000 ------------ A 0.50 0.91 0.70 C 0.50 0.09 0.30 0000 --- --- --- --- 004346 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004759 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005190 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005323 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005428 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005744 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 006165 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006174 00000 ------------ C 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 006292 00000 ------------ G 0.50 0.93 0.70 A 0.50 0.07 0.30 0000 --- --- --- --- 006393 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007206 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007966 00000 ------------ C 0.94 0.45 0.71 T 0.06 0.55 0.29 0000 --- --- --- --- 008542 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008882 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009320 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 009363 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009700 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009783 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010226 00000 ------------ G 0.93 0.45 0.70 A 0.07 0.55 0.30 0000 --- --- --- --- 010465 00000 ------------ G 0.93 0.90 0.92 T 0.07 0.10 0.08 0000 --- --- --- --- 010643 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010657 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 010672 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 010791 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010808 00000 ------------ - 0.44 0.91 0.66 + 0.56 0.09 0.34 0000 --- --- --- --- 010886 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010921 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 011068 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011244 00000 ------------ - 0.06 0.10 0.08 + 0.94 0.90 0.92 0000 --- --- --- --- 011314 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011459 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 011898 00000 ------------ A 1.00 0.90 0.95 G 0.00 0.10 0.05 0000 --- --- --- --- 011962 00000 ------------ A 1.00 0.90 0.95 G 0.00 0.10 0.05 0000 --- --- --- --- 012127 00000 ------------ A 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 012184 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 012538 00699 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0204 TAT TAC TYR(Y) TYR(Y) 012694 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 013009 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 013179 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 013497 00889 NON-SYN A 0.68 0.61 0.65 G 0.32 0.39 0.35 0268 ATA GTA ILE(I) VAL(V) 014018 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 014635 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014883 00000 ------------ C 0.94 0.45 0.71 G 0.06 0.55 0.29 0000 --- --- --- --- 014972 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015239 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015498 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015762 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015958 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 015994 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 016008 00000 ------------ C 0.94 0.91 0.93 T 0.06 0.09 0.07 0000 --- --- --- --- 016979 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 019006 00000 ------------ G 0.62 0.61 0.62 A 0.38 0.39 0.38 0000 --- --- --- --- 019096 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 019912 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019992 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020381 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 020387 00000 ------------ C 0.65 0.61 0.63 T 0.35 0.39 0.37 0000 --- --- --- --- 020454 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020563 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 021350 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 021573 00000 ------------ C 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 021711 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021734 00000 ------------ G 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 022391 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022395 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 022427 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 022981 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 022985 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023010 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 023146 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023147 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023463 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 023758 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023889 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 023975 00000 ------------ C 0.96 0.48 0.72 T 0.04 0.52 0.28 0000 --- --- --- --- 023992 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 024173 00000 ------------ C 0.71 0.64 0.68 G 0.29 0.36 0.32 0000 --- --- --- --- 024561 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 024616 00000 ------------ - 0.23 0.00 0.11 + 0.77 1.00 0.89 0000 --- --- --- --- 024895 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 025424 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025434 00000 ------------ T 0.77 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 025720 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 025785 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 025827 00000 ------------ T 0.44 0.91 0.66 C 0.56 0.09 0.34 0000 --- --- --- --- 026227 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026632 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 026849 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026904 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 027073 01545 SYNON C 0.98 0.89 0.93 T 0.02 0.11 0.07 0486 AGC AGT SER(S) SER(S) 027591 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 027667 00000 ------------ G 0.94 0.91 0.92 A 0.06 0.09 0.08 0000 --- --- --- --- 027707 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027840 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 028086 00000 ------------ A 0.61 0.64 0.62 C 0.39 0.36 0.38 0000 --- --- --- --- 028134 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 028699 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 028715 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 028856 00000 ------------ T 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 029161 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 029173 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 029995* 030214 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 030419 00000 ------------ A 0.69 0.61 0.65 G 0.31 0.39 0.35 0000 --- --- --- --- 031243 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 031749 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032152 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 032345 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032527 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 032588 00000 ------------ T 0.94 0.91 0.92 C 0.06 0.09 0.08 0000 --- --- --- --- 032615 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 032770 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 032818 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032897 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033153 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 033252 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033460 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 033708 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 033722 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 034363 00000 ------------ T 0.78 1.00 0.89 C 0.22 0.00 0.11 0000 --- --- --- --- 034389 00000 ------------ G 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 034399 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 035486* 035773 00000 ------------ C 0.43 0.90 0.66 T 0.57 0.10 0.34 0000 --- --- --- --- 035827 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 036137 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 036184 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 036383 00000 ------------ T 0.50 0.90 0.69 A 0.50 0.10 0.31 0000 --- --- --- --- 037038 00000 ------------ G 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 037050 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 037680 00000 ------------ T 0.95 0.45 0.70 G 0.05 0.55 0.30 0000 --- --- --- --- 038718 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038983 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 039399 00000 ------------ A 0.96 0.91 0.93 G 0.04 0.09 0.07 0000 --- --- --- --- 039987 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 041000 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 041277 00000 ------------ C 0.50 0.91 0.71 T 0.50 0.09 0.29 0000 --- --- --- --- 041954 00000 ------------ A 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 042399 02694 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042698 02993 3' UTR - 0.00 0.04 0.02 + 1.00 0.96 0.98 0000 --- --- --- --- 043648 00000 ------------ G 0.45 0.93 0.69 A 0.55 0.07 0.31 0000 --- --- --- --- 044940 00000 ------------ G 0.78 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 044953 00000 ------------ T 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001225: AG 001738: A 003029: TCC 004211: T 010808: T 011244: C 016979: CT 020381: A 023758: T 023889: A 024616: T 026632: T 026904: TTG 032770: A 033722: CTCA 035827: CTTT 042698: TATTT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 029995 A 0.85 1.00 0.93 G 0.04 0.00 0.02 T 0.10 0.00 0.05 035486 A 0.91 0.89 0.90 C 0.02 0.00 0.01 G 0.07 0.11 0.09 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000141 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000148 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 000381 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000449 00000 ------------ T 0.73 1.00 0.87 A 0.27 0.00 0.13 0000 --- --- --- --- 000891 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000999 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 001272 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001850 00000 ------------ C 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 002270 00138 5' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002420 00000 ------------ G 0.67 1.00 0.84 A 0.33 0.00 0.16 0000 --- --- --- --- 002741 00000 ------------ - 0.36 0.93 0.65 + 0.64 0.07 0.35 0000 --- --- --- --- 003010 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 003784 00000 ------------ T 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 003800 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004094 00000 ------------ - 1.00 0.95 0.98 + 0.00 0.05 0.02 0000 --- --- --- --- 004374 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 004443 00000 ------------ C 0.83 0.66 0.74 T 0.17 0.34 0.26 0000 --- --- --- --- 004514 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 004858 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005113 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 005513 00000 ------------ G 0.96 0.76 0.87 A 0.04 0.24 0.13 0000 --- --- --- --- 006245 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 006556 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006638 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 006982 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007403 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 008542 00000 ------------ T 0.76 0.97 0.86 G 0.24 0.03 0.14 0000 --- --- --- --- 008553 00000 ------------ G 0.74 0.97 0.85 A 0.26 0.03 0.15 0000 --- --- --- --- 008741 00000 ------------ G 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 009239 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009466 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009512 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 010856 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011516 00000 ------------ G 0.37 0.91 0.64 A 0.63 0.09 0.36 0000 --- --- --- --- 011665 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011914 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 012317 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 012490 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 012610 00000 ------------ - 0.72 0.86 0.79 + 0.28 0.14 0.21 0000 --- --- --- --- 012818 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 013355 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013408 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013678 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013788 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014085 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 014186 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 014198 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 014258 00000 ------------ A 0.36 0.90 0.63 C 0.64 0.10 0.37 0000 --- --- --- --- 014605 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014614 00000 ------------ - 0.78 1.00 0.89 + 0.22 0.00 0.11 0000 --- --- --- --- 015149 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 015386 00000 ------------ G 0.89 0.88 0.88 A 0.11 0.12 0.12 0000 --- --- --- --- 015449 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 015467 00483 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0112 GTG GTA VAL(V) VAL(V) 015638 00654 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015971 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 016120 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016155 00000 ------------ G 0.43 0.93 0.69 A 0.57 0.07 0.31 0000 --- --- --- --- 016749 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000148: T 002741: CAAAAACAAAA 004094: A 006638: T 009512: T 012610: T 014614: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000209 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 000275 00000 ------------ C 0.93 0.79 0.86 G 0.07 0.21 0.14 0000 --- --- --- --- 000363 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 000757 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000944 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 000990 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002190 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 002312 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002512 00000 ------------ A 0.75 0.39 0.58 T 0.25 0.61 0.42 0000 --- --- --- --- 002658 00000 ------------ C 0.63 0.39 0.52 G 0.37 0.61 0.48 0000 --- --- --- --- 002724 00000 ------------ T 0.96 0.72 0.85 A 0.04 0.28 0.15 0000 --- --- --- --- 002955 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003118 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003247 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003543 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 003657 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003871 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 003920 00000 ------------ C 0.38 0.68 0.53 T 0.62 0.32 0.47 0000 --- --- --- --- 003934 00000 ------------ C 0.40 0.89 0.66 T 0.60 0.11 0.34 0000 --- --- --- --- 004074 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004457 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004475 00000 ------------ C 0.73 0.41 0.57 T 0.27 0.59 0.43 0000 --- --- --- --- 004648 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004762 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004964 00000 ------------ T 0.82 0.70 0.76 C 0.17 0.30 0.24 0000 --- --- --- --- 005132 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005418 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005437 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005446 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005643 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006091 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006140 00000 ------------ G 0.97 0.96 0.97 A 0.03 0.04 0.03 0000 --- --- --- --- 006355 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006956 00322 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0083 GAA GGA GLU(E) GLY(G) 007044 00410 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0112 CAT CAC HIS(H) HIS(H) 007212 00000 ------------ C 0.90 0.41 0.66 T 0.10 0.59 0.34 0000 --- --- --- --- 007531 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007599 00000 ------------ A 0.85 0.53 0.72 T 0.15 0.47 0.28 0000 --- --- --- --- 007901 00000 ------------ G 0.98 0.84 0.92 C 0.02 0.16 0.08 0000 --- --- --- --- 007917 00000 ------------ G 0.93 0.53 0.77 C 0.07 0.47 0.23 0000 --- --- --- --- 007975 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 007995 00000 ------------ G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 008013 00000 ------------ T 0.87 0.62 0.77 C 0.13 0.38 0.23 0000 --- --- --- --- 008043 00000 ------------ A 0.76 0.47 0.64 G 0.24 0.53 0.36 0000 --- --- --- --- 009304 00443 SYNON T 0.76 0.37 0.56 C 0.24 0.63 0.44 0123 CCT CCC PRO(P) PRO(P) 009314 00453 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0127 CTC GTC LEU(L) VAL(V) 009511 00000 ------------ T 0.74 0.41 0.57 C 0.26 0.59 0.43 0000 --- --- --- --- 009558 00000 ------------ C 0.95 0.96 0.95 T 0.05 0.04 0.05 0000 --- --- --- --- 009612 00000 ------------ C 0.45 0.80 0.64 T 0.55 0.20 0.36 0000 --- --- --- --- 009613 00000 ------------ C 0.55 0.85 0.70 T 0.45 0.15 0.30 0000 --- --- --- --- 011592 00000 ------------ G 0.70 0.90 0.79 A 0.30 0.10 0.21 0000 --- --- --- --- 011610 00000 ------------ T 0.93 0.95 0.94 C 0.07 0.05 0.06 0000 --- --- --- --- 011669 00000 ------------ C 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 011687 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012564 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 012891 00000 ------------ G 0.74 0.41 0.59 A 0.26 0.59 0.41 0000 --- --- --- --- 013106 00701 SYNON C 0.92 0.97 0.95 A 0.08 0.03 0.05 0209 CGC CGA ARG(R) ARG(R) 013192 00000 ------------ G 0.89 0.98 0.94 A 0.11 0.02 0.06 0000 --- --- --- --- 013231 00000 ------------ A 0.81 0.33 0.55 G 0.19 0.68 0.45 0000 --- --- --- --- 013275 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 013279 00000 ------------ C 0.39 0.74 0.57 A 0.61 0.26 0.43 0000 --- --- --- --- 014170 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014216 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014509 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 014510 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 015785 00000 ------------ G 0.97 0.64 0.82 A 0.03 0.36 0.18 0000 --- --- --- --- 016001 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016038 00000 ------------ T 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 016078 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 016423 00802 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0243 GGG GCG GLY(G) ALA(A) 016632 00000 ------------ - 0.02 0.33 0.16 + 0.98 0.68 0.84 0000 --- --- --- --- 016834 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018104 01193 SYNON C 0.73 0.70 0.71 T 0.27 0.30 0.29 0373 ATC ATT ILE(I) ILE(I) 018253 01342 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018389 01478 3' UTR T 0.91 0.95 0.93 C 0.09 0.05 0.07 0000 --- --- --- --- 018795 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 018874 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018931 00000 ------------ A 0.43 0.69 0.55 G 0.57 0.31 0.45 0000 --- --- --- --- 019112 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 019346 00000 ------------ A 0.92 0.96 0.94 G 0.08 0.04 0.06 0000 --- --- --- --- 019501 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019997 00000 ------------ C 0.75 0.71 0.73 A 0.25 0.29 0.27 0000 --- --- --- --- 020194 00000 ------------ C 0.98 0.69 0.84 T 0.02 0.31 0.16 0000 --- --- --- --- 020208 00000 ------------ A 0.50 0.71 0.60 G 0.50 0.29 0.40 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000209: CCA 000757: AAG 004762: TGAG 016078: A 016632: C Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001690 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 001788 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 001807 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 002146 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 002235 00000 ------------ A 0.80 0.90 0.85 G 0.20 0.10 0.15 0000 --- --- --- --- 002982 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002988 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003029 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003039 00000 ------------ - 0.04 0.10 0.07 + 0.96 0.90 0.93 0000 --- --- --- --- 003064 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 003087 00000 ------------ T 1.00 0.88 0.94 C 0.00 0.12 0.06 0000 --- --- --- --- 003741 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 003879 00000 ------------ C 0.95 0.97 0.96 G 0.05 0.03 0.04 0000 --- --- --- --- 004706 00000 ------------ C 0.92 0.88 0.91 A 0.08 0.12 0.09 0000 --- --- --- --- 004762 00000 ------------ G 0.58 0.50 0.56 C 0.42 0.50 0.44 0000 --- --- --- --- 005089 00254 SYNON A 0.98 1.00 0.99 T 0.02 0.00 0.01 0066 GTA GTT VAL(V) VAL(V) 005205 00000 ------------ - 0.91 0.93 0.92 + 0.09 0.07 0.08 0000 --- --- --- --- 005207 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005208 00000 ------------ - 0.27 0.15 0.21 + 0.73 0.85 0.79 0000 --- --- --- --- 005269 00000 ------------ C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 005700 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005723 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 005832 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005895 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 005905 00000 ------------ A 0.77 0.81 0.79 G 0.23 0.19 0.21 0000 --- --- --- --- 006854 00459 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0135 GGA AGA GLY(G) ARG(R) 007133 00000 ------------ A 0.75 0.22 0.52 C 0.25 0.78 0.48 0000 --- --- --- --- 007254 00000 ------------ - 0.92 1.00 0.95 + 0.08 0.00 0.05 0000 --- --- --- --- 007668 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 007792 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 009983 00000 ------------ C 0.90 0.76 0.84 T 0.10 0.24 0.16 0000 --- --- --- --- 010070 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 010182 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010516 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 010755 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 011335 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011445 00000 ------------ A 0.50 0.76 0.64 C 0.50 0.24 0.36 0000 --- --- --- --- 011493 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011494 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 011749 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012113 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 012322 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 012494 00000 ------------ T 0.96 0.97 0.96 G 0.04 0.03 0.04 0000 --- --- --- --- 012572 00000 ------------ A 0.93 0.66 0.80 T 0.07 0.34 0.20 0000 --- --- --- --- 012736 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012905 00897 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0281 GAC AAC ASP(D) ASN(N) 013165 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013265 01082 SYNON C 0.95 1.00 0.97 T 0.05 0.00 0.03 0342 TAC TAT TYR(Y) TYR(Y) 013294 01111 NON-SYN C 0.93 0.39 0.68 G 0.07 0.61 0.33 0352 ACT AGT THR(T) SER(S) 013443 01260 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0402 ATT GTT ILE(I) VAL(V) 013734 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 013752 00000 ------------ - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 014300 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 014305 00000 ------------ T 0.63 0.74 0.69 G 0.37 0.26 0.31 0000 --- --- --- --- 014365 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014706 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014889 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 015191 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015234 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 015303 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015416 00000 ------------ T 0.93 0.74 0.83 C 0.07 0.26 0.17 0000 --- --- --- --- 015930 00000 ------------ - 0.84 0.41 0.62 + 0.16 0.59 0.38 0000 --- --- --- --- 016084 00000 ------------ C 0.18 0.82 0.50 T 0.82 0.18 0.50 0000 --- --- --- --- 016577 00000 ------------ T 0.97 0.90 0.94 C 0.03 0.10 0.06 0000 --- --- --- --- 016729 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 016796 00000 ------------ C 0.42 0.70 0.55 A 0.58 0.30 0.45 0000 --- --- --- --- 016802 00000 ------------ T 0.69 1.00 0.84 C 0.31 0.00 0.16 0000 --- --- --- --- 016821 00000 ------------ - 0.85 1.00 0.93 + 0.15 0.00 0.07 0000 --- --- --- --- 016947 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016959 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017228 01736 3' UTR A 0.81 0.63 0.72 T 0.19 0.37 0.28 0000 --- --- --- --- 017608 02116 3' UTR C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 017685 02193 3' UTR - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 017914 02422 3' UTR - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 018051 00000 ------------ A 0.66 0.59 0.62 T 0.34 0.41 0.38 0000 --- --- --- --- 018063 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 018485 00000 ------------ T 0.67 0.85 0.76 C 0.33 0.15 0.24 0000 --- --- --- --- 018647 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 018648 00000 ------------ C 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 018649 00000 ------------ C 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 018650 00000 ------------ T 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 019056 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 019516 00000 ------------ - 0.00 0.35 0.17 + 1.00 0.65 0.83 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001788: G 003039: AG 005205: C 005208: T 007254: CA 010070: CT 010755: CTT 013752: A 015191: GA 015930: T 016821: AGTT 017685: AAT 017914: AAAGT 019516: ATTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000053 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 000288 00000 ------------ A 0.75 0.70 0.73 G 0.25 0.30 0.27 0000 --- --- --- --- 000878 00000 ------------ G 0.75 0.68 0.71 T 0.25 0.32 0.29 0000 --- --- --- --- 000927 00000 ------------ C 0.75 0.68 0.71 T 0.25 0.32 0.29 0000 --- --- --- --- 001544 00000 ------------ G 0.69 0.70 0.70 A 0.31 0.30 0.30 0000 --- --- --- --- 001672 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 001684 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001748 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001830 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 001914 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001936 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002103 00000 ------------ C 0.89 0.80 0.85 T 0.11 0.20 0.15 0000 --- --- --- --- 002181 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 002182 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002860 00000 ------------ G 0.88 1.00 0.95 A 0.12 0.00 0.05 0000 --- --- --- --- 002930 00000 ------------ G 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 002943 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003269 00000 ------------ C 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 003712 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 003770 00000 ------------ A 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 004069 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 004125 00000 ------------ C 0.64 0.52 0.58 T 0.36 0.48 0.42 0000 --- --- --- --- 004186 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 004221 00000 ------------ G 0.70 0.52 0.61 A 0.30 0.48 0.39 0000 --- --- --- --- 004233 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004947 00000 ------------ C 0.50 0.50 0.50 T 0.50 0.50 0.50 0000 --- --- --- --- 005021 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005151 00000 ------------ A 0.59 0.70 0.64 G 0.41 0.30 0.36 0000 --- --- --- --- 005175 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005284 00000 ------------ - 0.76 0.40 0.57 + 0.24 0.60 0.42 0000 --- --- --- --- 005408 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005428 00000 ------------ G 0.80 0.73 0.76 T 0.20 0.27 0.24 0000 --- --- --- --- 005671 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005847 00000 ------------ C 0.55 0.50 0.52 A 0.45 0.50 0.48 0000 --- --- --- --- 005862 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006188 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006233 00000 ------------ C 0.48 0.78 0.64 T 0.52 0.22 0.36 0000 --- --- --- --- 006522 00000 ------------ - 0.11 0.20 0.16 + 0.89 0.80 0.84 0000 --- --- --- --- 006577 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 006920 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007218 00000 ------------ G 0.79 0.69 0.74 A 0.21 0.31 0.26 0000 --- --- --- --- 007698 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007826 00000 ------------ T 0.65 0.41 0.53 C 0.35 0.59 0.47 0000 --- --- --- --- 008222 00000 ------------ C 0.93 0.72 0.83 G 0.07 0.28 0.17 0000 --- --- --- --- 008269 00000 ------------ G 0.93 0.69 0.81 T 0.07 0.31 0.19 0000 --- --- --- --- 008273 00000 ------------ T 0.98 0.69 0.83 A 0.02 0.31 0.17 0000 --- --- --- --- 008319 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008936 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009183 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 009429 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 009571 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010152 00000 ------------ G 0.94 0.73 0.82 C 0.06 0.27 0.17 0000 --- --- --- --- 010414 00000 ------------ T 0.97 0.73 0.85 C 0.03 0.27 0.15 0000 --- --- --- --- 010433 00000 ------------ G 0.53 0.77 0.66 A 0.47 0.23 0.34 0000 --- --- --- --- 010644 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010796 00000 ------------ A 0.97 0.80 0.88 G 0.03 0.20 0.12 0000 --- --- --- --- 011141 00000 ------------ G 0.64 0.39 0.51 C 0.36 0.61 0.49 0000 --- --- --- --- 011593 00000 ------------ T 0.62 0.39 0.50 A 0.38 0.61 0.50 0000 --- --- --- --- 012111 00000 ------------ C 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 012461 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012841 00000 ------------ T 0.82 0.67 0.74 C 0.18 0.33 0.26 0000 --- --- --- --- 013032 00000 ------------ C 0.60 0.70 0.65 T 0.40 0.30 0.35 0000 --- --- --- --- 013066 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013194 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 013369 00000 ------------ - 0.61 0.70 0.66 + 0.39 0.30 0.34 0000 --- --- --- --- 013439 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 013782 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014572 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 014706 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014711 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014866 00000 ------------ A 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 015329 00000 ------------ G 0.82 0.69 0.76 A 0.17 0.31 0.24 0000 --- --- --- --- 015492 00000 ------------ A 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 015571 00000 ------------ C 0.67 0.70 0.69 T 0.33 0.30 0.31 0000 --- --- --- --- 016411 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 016430 00000 ------------ C 0.98 0.97 0.97 T 0.02 0.03 0.03 0000 --- --- --- --- 016569 00000 ------------ C 0.76 0.59 0.68 A 0.24 0.41 0.32 0000 --- --- --- --- 016699 00000 ------------ A 0.52 0.81 0.64 G 0.48 0.19 0.36 0000 --- --- --- --- 017135 00000 ------------ T 0.81 0.68 0.74 C 0.19 0.32 0.26 0000 --- --- --- --- 017161 00000 ------------ - 0.79 0.68 0.73 + 0.21 0.32 0.27 0000 --- --- --- --- 017216 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017348 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017443 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017787 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017837 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018224 00000 ------------ A 0.89 0.68 0.79 G 0.11 0.32 0.21 0000 --- --- --- --- 018298 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 018370 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 018503 00000 ------------ C 0.50 0.76 0.63 T 0.50 0.24 0.37 0000 --- --- --- --- 018513 00000 ------------ A 0.50 0.76 0.63 G 0.50 0.24 0.37 0000 --- --- --- --- 018553 00000 ------------ C 0.88 0.55 0.72 T 0.12 0.45 0.28 0000 --- --- --- --- 018559 00000 ------------ T 0.90 0.68 0.79 C 0.10 0.32 0.21 0000 --- --- --- --- 018857 00000 ------------ A 1.00 0.95 0.97 G 0.00 0.05 0.03 0000 --- --- --- --- 019792 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 020014 00000 ------------ G 0.82 0.66 0.74 C 0.17 0.34 0.26 0000 --- --- --- --- 020287 00000 ------------ C 0.97 0.75 0.86 T 0.03 0.25 0.14 0000 --- --- --- --- 020449 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 020567 00000 ------------ T 0.77 0.67 0.72 G 0.23 0.33 0.28 0000 --- --- --- --- 020751 00000 ------------ G 0.75 0.65 0.70 A 0.25 0.35 0.30 0000 --- --- --- --- 021209 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021290 00000 ------------ C 0.85 0.67 0.76 T 0.15 0.33 0.24 0000 --- --- --- --- 021582 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021807 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 022240 00000 ------------ C 0.84 0.68 0.76 A 0.16 0.32 0.24 0000 --- --- --- --- 022431 00000 ------------ T 0.75 0.54 0.64 C 0.25 0.46 0.36 0000 --- --- --- --- 023283 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024203 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 024229 00000 ------------ A 0.82 0.67 0.74 G 0.17 0.33 0.26 0000 --- --- --- --- 024294 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 024475 00315 SYNON C 0.75 0.67 0.71 T 0.25 0.33 0.29 0097 GAC GAT ASP(D) ASP(D) 024631 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024692 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 024732 00000 ------------ A 0.76 0.58 0.68 C 0.24 0.42 0.33 0000 --- --- --- --- 024813 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 024852 00000 ------------ T 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 025079 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 025506 00000 ------------ - 0.95 1.00 0.97 + 0.05 0.00 0.03 0000 --- --- --- --- 025553 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 025635 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 025636 00000 ------------ A 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 025637 00000 ------------ C 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025638 00000 ------------ C 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025639 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025640 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 025641 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 025643 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 025645 00000 ------------ G 0.86 0.68 0.78 A 0.14 0.32 0.23 0000 --- --- --- --- 025697 00000 ------------ A 0.52 0.76 0.64 G 0.48 0.24 0.36 0000 --- --- --- --- 025787 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 026179 00000 ------------ G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 026302 00000 ------------ C 0.91 0.67 0.80 T 0.09 0.33 0.20 0000 --- --- --- --- 026336 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 026370 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 026590 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 027645 00000 ------------ G 0.85 0.67 0.76 T 0.15 0.33 0.24 0000 --- --- --- --- 027927 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 028153 00450 SYNON T 0.93 1.00 0.96 C 0.07 0.00 0.04 0142 GAT GAC ASP(D) ASP(D) 028458 00000 ------------ C 0.58 0.80 0.69 A 0.42 0.20 0.31 0000 --- --- --- --- 028822 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029006 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029316 00000 ------------ - 0.15 0.30 0.23 + 0.85 0.70 0.77 0000 --- --- --- --- 029386 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 029523 00000 ------------ A 0.55 0.78 0.67 T 0.45 0.22 0.33 0000 --- --- --- --- 029628 00000 ------------ A 0.54 0.77 0.66 G 0.46 0.23 0.34 0000 --- --- --- --- 029805 00000 ------------ G 0.54 0.77 0.66 A 0.46 0.23 0.34 0000 --- --- --- --- 029841 00000 ------------ C 0.54 0.77 0.66 A 0.46 0.23 0.34 0000 --- --- --- --- 029983 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 030042 00000 ------------ G 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030059 00000 ------------ A 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030070 00000 ------------ T 0.56 0.80 0.68 G 0.44 0.20 0.32 0000 --- --- --- --- 030362 00000 ------------ T 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030456 00000 ------------ C 0.54 0.77 0.66 G 0.46 0.23 0.34 0000 --- --- --- --- 030464 00000 ------------ T 0.67 0.70 0.69 C 0.33 0.30 0.31 0000 --- --- --- --- 030493 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030604 00000 ------------ T 0.54 0.77 0.66 C 0.46 0.23 0.34 0000 --- --- --- --- 030787 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030931 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 031029 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 031205 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 031427 00000 ------------ C 0.61 0.79 0.70 T 0.39 0.21 0.30 0000 --- --- --- --- 031429 00000 ------------ C 0.55 0.79 0.66 T 0.45 0.21 0.34 0000 --- --- --- --- 031564 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031582 00000 ------------ T 0.55 0.79 0.66 C 0.45 0.21 0.34 0000 --- --- --- --- 031603 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031637 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031696 00000 ------------ C 0.58 0.52 0.55 T 0.42 0.48 0.45 0000 --- --- --- --- 031697 00000 ------------ G 0.55 0.79 0.67 T 0.45 0.21 0.33 0000 --- --- --- --- 031752 00000 ------------ T 0.57 0.79 0.68 C 0.43 0.21 0.32 0000 --- --- --- --- 031802 00000 ------------ C 0.84 0.70 0.77 T 0.16 0.30 0.23 0000 --- --- --- --- 032024 00000 ------------ A 0.85 0.70 0.77 C 0.15 0.30 0.23 0000 --- --- --- --- 032031 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 032175 00000 ------------ G 0.55 0.84 0.69 T 0.45 0.16 0.31 0000 --- --- --- --- 032221 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 032297 00000 ------------ A 0.55 0.78 0.67 G 0.45 0.22 0.33 0000 --- --- --- --- 032543 00000 ------------ G 0.57 0.78 0.69 A 0.42 0.22 0.31 0000 --- --- --- --- 032627 00000 ------------ T 0.59 0.77 0.70 C 0.41 0.23 0.30 0000 --- --- --- --- 034439 00000 ------------ A 0.85 0.70 0.77 G 0.15 0.30 0.23 0000 --- --- --- --- 034706 00000 ------------ T 0.57 0.78 0.68 C 0.43 0.22 0.32 0000 --- --- --- --- 034983 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035072 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035082 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035289 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 035343 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 035410 00000 ------------ C 0.54 0.77 0.66 T 0.46 0.23 0.34 0000 --- --- --- --- 035605 00000 ------------ T 0.61 0.52 0.57 A 0.39 0.48 0.43 0000 --- --- --- --- 035764 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036035 00000 ------------ G 0.61 0.52 0.57 A 0.39 0.48 0.43 0000 --- --- --- --- 036276 00000 ------------ G 0.54 0.78 0.66 A 0.46 0.22 0.34 0000 --- --- --- --- 036326 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 036657 00000 ------------ G 0.54 0.78 0.66 A 0.46 0.22 0.34 0000 --- --- --- --- 036745 00000 ------------ A 0.54 0.78 0.66 G 0.46 0.22 0.34 0000 --- --- --- --- 036977 00000 ------------ A 0.84 0.68 0.76 G 0.16 0.33 0.24 0000 --- --- --- --- 036998 00000 ------------ A 0.52 0.80 0.66 T 0.48 0.20 0.34 0000 --- --- --- --- 037020 00000 ------------ G 0.52 0.80 0.66 A 0.48 0.20 0.34 0000 --- --- --- --- 037094 00000 ------------ T 0.52 0.80 0.65 C 0.48 0.20 0.35 0000 --- --- --- --- 037342 00000 ------------ A 0.50 0.80 0.65 G 0.50 0.20 0.35 0000 --- --- --- --- 037544 00000 ------------ T 0.52 0.79 0.65 C 0.48 0.21 0.35 0000 --- --- --- --- 037589 00000 ------------ T 0.50 0.79 0.64 C 0.50 0.21 0.36 0000 --- --- --- --- 037718 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 037777 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 037861 00000 ------------ A 0.55 0.78 0.67 C 0.45 0.22 0.33 0000 --- --- --- --- 037915 00000 ------------ G 0.57 0.52 0.55 T 0.42 0.48 0.45 0000 --- --- --- --- 038126 00000 ------------ A 0.55 0.80 0.67 G 0.45 0.20 0.33 0000 --- --- --- --- 038158 00000 ------------ A 0.55 0.80 0.67 G 0.45 0.20 0.33 0000 --- --- --- --- 038253 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 038286 00000 ------------ G 0.55 0.78 0.67 T 0.45 0.22 0.33 0000 --- --- --- --- 038316 00000 ------------ G 0.57 0.78 0.69 C 0.42 0.22 0.31 0000 --- --- --- --- 038383 00000 ------------ T 0.58 0.79 0.69 A 0.42 0.21 0.31 0000 --- --- --- --- 038391 00000 ------------ G 0.53 0.76 0.65 A 0.47 0.24 0.35 0000 --- --- --- --- 038994 00000 ------------ C 0.55 0.80 0.68 T 0.45 0.20 0.32 0000 --- --- --- --- 039377 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 039425 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039465 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 039669 00687 SYNON G 0.85 0.70 0.77 A 0.15 0.30 0.23 0221 CCG CCA PRO(P) PRO(P) 039684 00702 SYNON T 0.55 0.78 0.67 C 0.45 0.22 0.33 0226 GAT GAC ASP(D) ASP(D) 039901 00000 ------------ T 0.57 0.78 0.68 C 0.42 0.23 0.33 0000 --- --- --- --- 039922 00000 ------------ C 0.98 0.86 0.92 T 0.02 0.14 0.08 0000 --- --- --- --- 040003 00000 ------------ C 0.58 0.77 0.69 G 0.42 0.23 0.31 0000 --- --- --- --- 040069 00000 ------------ A 0.53 0.80 0.67 T 0.47 0.20 0.33 0000 --- --- --- --- 040183 00000 ------------ T 0.57 0.78 0.69 C 0.42 0.22 0.31 0000 --- --- --- --- 040192 00000 ------------ G 0.60 0.52 0.56 A 0.40 0.48 0.44 0000 --- --- --- --- 040302 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 040313 00000 ------------ C 0.84 0.70 0.77 T 0.16 0.30 0.23 0000 --- --- --- --- 040404 00000 ------------ C 0.57 0.78 0.68 T 0.43 0.22 0.32 0000 --- --- --- --- 040416 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040548 00000 ------------ C 0.55 0.78 0.67 G 0.45 0.22 0.33 0000 --- --- --- --- 040875 00000 ------------ - 0.57 0.80 0.70 + 0.43 0.20 0.30 0000 --- --- --- --- 041097 00000 ------------ G 0.57 0.81 0.68 A 0.42 0.19 0.32 0000 --- --- --- --- 042326 00777 SYNON C 0.80 0.91 0.86 T 0.20 0.09 0.14 0251 ATC ATT ILE(I) ILE(I) 043021 00000 ------------ A 0.86 0.73 0.79 G 0.14 0.27 0.21 0000 --- --- --- --- 044500 00000 ------------ C 0.87 0.72 0.79 T 0.13 0.28 0.21 0000 --- --- --- --- 044917 00000 ------------ C 0.84 0.70 0.77 T 0.16 0.30 0.23 0000 --- --- --- --- 045830 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 045833 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 046001 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 046051 00000 ------------ C 0.85 0.69 0.77 T 0.15 0.31 0.23 0000 --- --- --- --- 046213 00000 ------------ G 0.83 0.65 0.75 C 0.17 0.35 0.25 0000 --- --- --- --- 046757 00000 ------------ A 0.86 0.68 0.78 G 0.14 0.32 0.22 0000 --- --- --- --- 046827 00000 ------------ G 0.84 0.61 0.73 A 0.16 0.39 0.27 0000 --- --- --- --- 047021 00000 ------------ C 0.85 0.70 0.77 T 0.15 0.30 0.23 0000 --- --- --- --- 047054 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 047095 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 047693 00000 ------------ A 0.86 0.70 0.78 G 0.14 0.30 0.22 0000 --- --- --- --- 047758 00000 ------------ C 0.86 0.69 0.77 G 0.14 0.31 0.23 0000 --- --- --- --- 047956 00000 ------------ T 0.95 0.81 0.88 A 0.05 0.19 0.12 0000 --- --- --- --- 048004 00000 ------------ C 0.83 0.70 0.76 G 0.17 0.30 0.24 0000 --- --- --- --- 048100 00000 ------------ T 0.76 0.91 0.84 C 0.24 0.09 0.16 0000 --- --- --- --- 048312 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 048316 00000 ------------ A 0.85 0.70 0.77 G 0.15 0.30 0.23 0000 --- --- --- --- 048926 00000 ------------ G 0.89 0.69 0.76 T 0.11 0.31 0.24 0000 --- --- --- --- 049492 00000 ------------ T 0.85 0.70 0.78 C 0.15 0.30 0.22 0000 --- --- --- --- 050511 00000 ------------ A 0.86 0.71 0.78 G 0.14 0.29 0.22 0000 --- --- --- --- 050978 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 051157 00000 ------------ T 0.87 0.65 0.76 G 0.13 0.35 0.24 0000 --- --- --- --- 051208 01064 NON-SYN C 0.87 0.65 0.76 T 0.13 0.35 0.24 0347 ACT ATT THR(T) ILE(I) 051927 00000 ------------ A 0.91 0.68 0.79 T 0.09 0.32 0.21 0000 --- --- --- --- 053672 01565 3' UTR C 0.79 0.70 0.74 G 0.21 0.30 0.26 0000 --- --- --- --- 053713 01606 3' UTR T 0.50 0.76 0.66 A 0.50 0.24 0.34 0000 --- --- --- --- 054691 00000 ------------ C 0.84 0.65 0.73 A 0.16 0.35 0.27 0000 --- --- --- --- 055566 00000 ------------ A 0.86 0.70 0.77 T 0.14 0.30 0.23 0000 --- --- --- --- 055586 00000 ------------ C 0.86 0.70 0.77 G 0.14 0.30 0.23 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005284: T 006522: A 006920: T 013369: T 017161: G 025079: T 025506: G 029316: C 029983: A 031205: T 040875: AT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000131 00000 ------------ C 0.79 0.42 0.61 G 0.21 0.58 0.39 0000 --- --- --- --- 000207 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002431 00000 ------------ C 0.85 0.80 0.83 T 0.15 0.20 0.17 0000 --- --- --- --- 002435 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003729 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003758 00000 ------------ C 0.79 0.89 0.84 G 0.21 0.11 0.16 0000 --- --- --- --- 003923 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004101 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 004133 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004151 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004495 00000 ------------ C 0.93 0.45 0.70 T 0.07 0.55 0.30 0000 --- --- --- --- 004924 00000 ------------ A 0.88 0.45 0.69 G 0.12 0.55 0.31 0000 --- --- --- --- 005097 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005162 00000 ------------ A 0.90 0.46 0.68 G 0.10 0.54 0.32 0000 --- --- --- --- 005310 00000 ------------ G 0.92 0.46 0.69 A 0.08 0.54 0.31 0000 --- --- --- --- 005347 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 006079 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006117 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 006158 00000 ------------ T 0.90 0.42 0.68 C 0.10 0.58 0.33 0000 --- --- --- --- 006339 00000 ------------ T 1.00 0.95 0.97 G 0.00 0.05 0.03 0000 --- --- --- --- 006544 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006558 00000 ------------ C 0.54 0.73 0.63 T 0.46 0.27 0.37 0000 --- --- --- --- 006702 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 006735 00000 ------------ A 0.76 0.86 0.81 G 0.24 0.14 0.19 0000 --- --- --- --- 006761 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006888 00000 ------------ - 0.05 0.03 0.04 + 0.95 0.97 0.96 0000 --- --- --- --- 006960 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007022 00000 ------------ A 0.55 0.71 0.63 T 0.45 0.29 0.37 0000 --- --- --- --- 007168 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007398 00000 ------------ A 0.54 0.84 0.68 T 0.46 0.16 0.32 0000 --- --- --- --- 007471 00000 ------------ C 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 007518 00000 ------------ A 0.58 0.93 0.76 G 0.42 0.07 0.24 0000 --- --- --- --- 008169 00000 ------------ C 0.96 0.97 0.96 T 0.04 0.03 0.04 0000 --- --- --- --- 008251 00000 ------------ G 0.77 0.89 0.83 T 0.23 0.11 0.17 0000 --- --- --- --- 008907 00000 ------------ G 0.82 0.90 0.87 A 0.17 0.10 0.13 0000 --- --- --- --- 009199 00000 ------------ T 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 009280 00000 ------------ - 0.20 0.00 0.10 + 0.80 1.00 0.90 0000 --- --- --- --- 009925 -----** 3' UTR G 0.83 0.45 0.64 C 0.17 0.55 0.36 0000 --- --- --- --- 009975 -----** 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010059 00000 ------------ G 0.81 0.98 0.89 A 0.19 0.02 0.11 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006888: A 009280: GTTTCTGGGTCT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000790 00000 ------------ A 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 000969 00000 ------------ T 0.65 0.93 0.79 C 0.35 0.07 0.21 0000 --- --- --- --- 000970 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001009 00000 ------------ A 0.93 0.65 0.79 G 0.07 0.35 0.21 0000 --- --- --- --- 001123 00000 ------------ A 0.78 1.00 0.89 G 0.23 0.00 0.11 0000 --- --- --- --- 001421 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 001440* 001632 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001724 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001919 00000 ------------ A 0.83 0.74 0.79 T 0.17 0.26 0.21 0000 --- --- --- --- 002667 00641 SYNON G 0.98 0.95 0.97 C 0.02 0.05 0.03 0184 CTG CTC LEU(L) LEU(L) 002892 00866 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003006 00980 3' UTR C 0.68 1.00 0.84 A 0.32 0.00 0.16 0000 --- --- --- --- 003014 00988 3' UTR C 0.86 0.70 0.77 T 0.14 0.30 0.23 0000 --- --- --- --- 003577 01551 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003872 00000 ------------ G 0.86 0.75 0.81 A 0.14 0.25 0.19 0000 --- --- --- --- 004069 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 004362 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004741 00000 ------------ C 0.69 0.93 0.80 G 0.31 0.07 0.20 0000 --- --- --- --- 004974 00000 ------------ T 0.76 1.00 0.87 G 0.24 0.00 0.13 0000 --- --- --- --- 005237 00000 ------------ A 0.94 0.64 0.79 G 0.06 0.36 0.21 0000 --- --- --- --- 005288 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005606 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 005676 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005728 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006150 00000 ------------ - 0.24 0.00 0.11 + 0.76 1.00 0.89 0000 --- --- --- --- 006192 00000 ------------ C 0.66 0.93 0.80 A 0.34 0.07 0.20 0000 --- --- --- --- 006333 00000 ------------ - 0.25 0.00 0.12 + 0.75 1.00 0.88 0000 --- --- --- --- 006469 00000 ------------ T 0.61 0.93 0.78 G 0.39 0.07 0.22 0000 --- --- --- --- 006556 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006677 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006150: T 006333: GAT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 001440 A 0.33 0.05 0.19 C 0.26 0.62 0.43 T 0.41 0.33 0.38 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000069 00000 ------------ T 0.55 0.60 0.58 C 0.45 0.40 0.42 0000 --- --- --- --- 000142 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000533 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000545 00000 ------------ A 0.58 0.59 0.59 G 0.42 0.41 0.41 0000 --- --- --- --- 000810 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000907 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000930 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000979 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001010 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001076 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001310 00000 ------------ A 0.59 0.62 0.60 C 0.41 0.38 0.40 0000 --- --- --- --- 002050 -----** SYNON G 0.96 1.00 0.98 A 0.04 0.00 0.02 0022 TCG TCA SER(S) SER(S) 002065 -----** SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0027 ACG ACA THR(T) THR(T) 002581 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 002586 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 002949 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002976 -----** SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0069 CCG CCA PRO(P) PRO(P) 003148 00000 ------------ G 0.87 1.00 0.94 C 0.13 0.00 0.06 0000 --- --- --- --- 003247 00000 ------------ A 0.88 0.98 0.93 G 0.12 0.02 0.07 0000 --- --- --- --- 003324 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003347 00000 ------------ T 0.71 0.65 0.68 C 0.29 0.35 0.32 0000 --- --- --- --- 003371 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 003477 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 003569 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003606 00000 ------------ C 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 003741 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003922 -----** NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0115 ACC ATC THR(T) ILE(I) 003928 -----** NON-SYN T 0.67 0.80 0.73 C 0.33 0.20 0.27 0117 ATT ACT ILE(I) THR(T) 004040 -----** 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004400 00000 ------------ G 0.41 0.76 0.59 A 0.59 0.24 0.41 0000 --- --- --- --- 004660 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004706 00000 ------------ A 0.46 0.80 0.62 G 0.54 0.20 0.38 0000 --- --- --- --- 005723 00000 ------------ G 0.43 0.77 0.60 A 0.57 0.23 0.40 0000 --- --- --- --- 005768 00000 ------------ C 0.76 0.96 0.86 T 0.24 0.04 0.14 0000 --- --- --- --- 005798 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005866 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003371: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000028 00000 ------------ G 0.62 0.50 0.57 A 0.38 0.50 0.43 0000 --- --- --- --- 000321 00000 ------------ C 0.61 0.89 0.74 T 0.39 0.11 0.26 0000 --- --- --- --- 000379 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 000789 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 001158 00000 ------------ G 0.95 0.67 0.82 A 0.05 0.33 0.18 0000 --- --- --- --- 001577 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001607 00000 ------------ G 0.96 0.70 0.83 C 0.04 0.30 0.17 0000 --- --- --- --- 001619 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001980 00000 ------------ C 0.54 0.48 0.51 G 0.46 0.52 0.49 0000 --- --- --- --- 002024 00020 5' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002504 00000 ------------ A 0.92 0.95 0.93 G 0.08 0.05 0.07 0000 --- --- --- --- 002584 00000 ------------ C 0.89 0.96 0.92 T 0.11 0.04 0.08 0000 --- --- --- --- 002589 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002617 00000 ------------ C 0.93 0.96 0.95 T 0.07 0.04 0.05 0000 --- --- --- --- 002725 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002754 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002764 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 003254 00000 ------------ G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 003370 00504 NON-SYN C 0.94 1.00 0.97 A 0.06 0.00 0.03 0157 CTG ATG LEU(L) MET(M) 003421 00555 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0174 GCC ACC ALA(A) THR(T) 003456 00590 SYNON G 0.96 0.72 0.84 A 0.04 0.28 0.16 0185 CTG CTA LEU(L) LEU(L) 003666 00800 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 004050 01184 3' UTR C 0.64 0.89 0.77 T 0.36 0.11 0.23 0000 --- --- --- --- 004105 01239 3' UTR T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 004145 01279 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004215 01349 3' UTR C 0.58 0.48 0.53 T 0.42 0.52 0.47 0000 --- --- --- --- 004480 00000 ------------ C 0.98 0.68 0.84 G 0.02 0.32 0.16 0000 --- --- --- --- 004522 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004993 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005168 00000 ------------ T 0.56 0.50 0.53 G 0.44 0.50 0.47 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000094 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 000275 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 000462 00000 ------------ C 1.00 0.80 0.90 T 0.00 0.20 0.10 0000 --- --- --- --- 000666 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000694 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 000848 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001358 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001964 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 001978 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002010 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002013 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 002088 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002705 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002890 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002997 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003037 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003172 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003309 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 003512 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003917 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 004106 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004188 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 004220 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 004248 00000 ------------ C 0.84 0.61 0.73 T 0.16 0.39 0.27 0000 --- --- --- --- 004342 00000 ------------ C 0.82 0.61 0.72 T 0.18 0.39 0.28 0000 --- --- --- --- 004593 00000 ------------ - 0.11 0.40 0.26 + 0.89 0.60 0.74 0000 --- --- --- --- 005119 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005120 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005439 00000 ------------ T 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 005600 00000 ------------ T 0.85 0.59 0.72 G 0.15 0.41 0.28 0000 --- --- --- --- 005603 00000 ------------ T 0.83 0.59 0.71 G 0.17 0.41 0.29 0000 --- --- --- --- 005840 00000 ------------ G 0.95 0.96 0.95 A 0.05 0.04 0.05 0000 --- --- --- --- 005847 00000 ------------ G 0.82 0.63 0.72 A 0.17 0.37 0.28 0000 --- --- --- --- 005985 00000 ------------ C 0.53 0.57 0.55 G 0.47 0.43 0.45 0000 --- --- --- --- 006246 00000 ------------ C 0.82 0.63 0.72 T 0.18 0.37 0.28 0000 --- --- --- --- 006417 00000 ------------ G 0.93 0.98 0.96 A 0.07 0.02 0.04 0000 --- --- --- --- 006593 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006679 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 006760 00000 ------------ C 0.85 0.59 0.72 T 0.15 0.41 0.28 0000 --- --- --- --- 006761 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 006837 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 006914 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 006959 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 007019 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007133 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007166 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 007668 00000 ------------ C 0.56 0.57 0.56 A 0.44 0.43 0.44 0000 --- --- --- --- 007686 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007834 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007916 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007971 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008150 00000 ------------ T 0.96 0.76 0.86 C 0.04 0.24 0.14 0000 --- --- --- --- 008238 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008362 00000 ------------ - 0.76 0.66 0.71 + 0.24 0.34 0.29 0000 --- --- --- --- 008369 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008668 00274 SYNON C 0.92 1.00 0.96 A 0.08 0.00 0.04 0035 ATC ATA ILE(I) ILE(I) 008671 00277 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0036 GTC GTT VAL(V) VAL(V) 008985 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009091 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009172 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009182 00000 ------------ G 0.98 0.83 0.90 C 0.02 0.17 0.10 0000 --- --- --- --- 009287 00000 ------------ A 0.68 1.00 0.84 G 0.33 0.00 0.16 0000 --- --- --- --- 009328 00000 ------------ C 0.74 0.79 0.76 G 0.26 0.21 0.24 0000 --- --- --- --- 009694 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009843 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009959 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009999 00000 ------------ A 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 010062 00000 ------------ C 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 010159 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 010225 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010286 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010343 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011045 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011081 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011148 00000 ------------ G 0.73 1.00 0.87 C 0.27 0.00 0.13 0000 --- --- --- --- 011201 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 011238 00000 ------------ G 0.80 0.63 0.71 T 0.20 0.37 0.29 0000 --- --- --- --- 011293 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011300 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011530 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011633 00861 NON-SYN T 0.94 1.00 0.97 C 0.06 0.00 0.03 0231 ATG ACG MET(M) THR(T) 011667 00895 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0242 GCC GCT ALA(A) ALA(A) 012024 01127 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0320 GAC AAC ASP(D) ASN(N) 012201 01206 NON-SYN A 0.94 1.00 0.97 G 0.06 0.00 0.03 0346 CAG CGG GLN(Q) ARG(R) 012267 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012288 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012406 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012488 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 012510 00000 ------------ A 0.65 0.80 0.72 G 0.35 0.20 0.28 0000 --- --- --- --- 012796 01382 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0405 GAG AAG GLU(E) LYS(K) 012837 01423 SYNON T 0.79 0.63 0.71 C 0.21 0.37 0.29 0418 CGT CGC ARG(R) ARG(R) 012843 01429 SYNON C 0.77 0.59 0.68 T 0.23 0.41 0.32 0420 ACC ACT THR(T) THR(T) 012963 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 013240 00000 ------------ A 0.93 0.98 0.95 G 0.07 0.02 0.05 0000 --- --- --- --- 013301 00000 ------------ T 0.91 0.63 0.77 C 0.09 0.37 0.23 0000 --- --- --- --- 013874 00000 ------------ G 0.74 1.00 0.86 A 0.26 0.00 0.14 0000 --- --- --- --- 014001 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014183 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 014494 01488 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0440 CGA CAA ARG(R) GLN(Q) 014585 01579 SYNON G 0.98 0.98 0.98 A 0.02 0.02 0.02 0470 GCG GCA ALA(A) ALA(A) 014774 00000 ------------ C 0.77 0.63 0.70 T 0.23 0.37 0.30 0000 --- --- --- --- 014926 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 015097 01697 NON-SYN G 0.75 1.00 0.87 C 0.25 0.00 0.13 0510 GAC CAC ASP(D) HIS(H) 015235 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 015569 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015573 00000 ------------ T 0.67 0.80 0.73 C 0.33 0.20 0.27 0000 --- --- --- --- 015778 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015790 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016187 01853 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0562 TAC CAC TYR(Y) HIS(H) 016362 01916 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0583 CGT TGT ARG(R) CYS(C) 016409 01963 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0598 ATC ATT ILE(I) ILE(I) 016585 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016806 00000 ------------ A 0.64 0.95 0.80 G 0.36 0.05 0.20 0000 --- --- --- --- 017399 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 017444 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 017972 02708 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018529 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004593: C 008238: ACA 008362: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000135 00000 ------------ G 0.85 0.83 0.84 C 0.15 0.17 0.16 0000 --- --- --- --- 000267 00000 ------------ G 0.61 0.76 0.69 A 0.39 0.24 0.31 0000 --- --- --- --- 000269 00000 ------------ G 0.92 0.83 0.87 A 0.08 0.17 0.13 0000 --- --- --- --- 000365 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 000594 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000810 00000 ------------ G 0.55 0.59 0.57 A 0.45 0.41 0.43 0000 --- --- --- --- 000814 00000 ------------ G 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 000832 00000 ------------ C 0.72 0.89 0.81 T 0.28 0.11 0.19 0000 --- --- --- --- 001015 00000 ------------ C 0.67 0.59 0.63 T 0.33 0.41 0.37 0000 --- --- --- --- 001027 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001082 00000 ------------ - 0.04 0.16 0.10 + 0.96 0.84 0.90 0000 --- --- --- --- 001268 00000 ------------ C 0.70 0.75 0.72 G 0.30 0.25 0.28 0000 --- --- --- --- 001476 00000 ------------ C 0.98 0.84 0.91 G 0.02 0.16 0.09 0000 --- --- --- --- 001535 00000 ------------ C 0.96 0.84 0.90 T 0.04 0.16 0.10 0000 --- --- --- --- 001632 00000 ------------ A 0.70 0.75 0.72 G 0.30 0.25 0.28 0000 --- --- --- --- 002758 00000 ------------ C 0.96 1.00 0.97 T 0.04 0.00 0.03 0000 --- --- --- --- 002773 00000 ------------ T 0.67 0.68 0.67 C 0.33 0.32 0.33 0000 --- --- --- --- 002849 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 002948 00000 ------------ C 0.96 0.97 0.96 G 0.04 0.03 0.04 0000 --- --- --- --- 002977 00000 ------------ T 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 003109 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003649 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 003652 00000 ------------ A 0.70 0.69 0.70 G 0.30 0.31 0.30 0000 --- --- --- --- 003771 00000 ------------ C 0.95 0.83 0.89 T 0.05 0.17 0.11 0000 --- --- --- --- 003843 00000 ------------ A 0.76 0.74 0.75 G 0.24 0.26 0.25 0000 --- --- --- --- 003873 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004096 00000 ------------ G 0.97 0.95 0.96 A 0.03 0.05 0.04 0000 --- --- --- --- 004178 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004370 00000 ------------ T 0.96 0.83 0.89 C 0.04 0.17 0.11 0000 --- --- --- --- 004420 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004804 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004833 00000 ------------ T 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 004983 00000 ------------ A 0.85 0.76 0.81 G 0.15 0.24 0.19 0000 --- --- --- --- 005646 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005647 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005898 00000 ------------ T 0.79 0.98 0.88 A 0.21 0.02 0.12 0000 --- --- --- --- 005904 00000 ------------ C 0.79 0.98 0.88 G 0.21 0.02 0.12 0000 --- --- --- --- 005930 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005985 00000 ------------ A 0.96 0.83 0.89 G 0.04 0.17 0.11 0000 --- --- --- --- 006023 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 006029 00000 ------------ A 0.96 0.83 0.89 T 0.04 0.17 0.11 0000 --- --- --- --- 006602 00000 ------------ G 0.90 0.89 0.89 C 0.10 0.11 0.11 0000 --- --- --- --- 006645 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 006920 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007025 00000 ------------ A 0.70 0.75 0.72 T 0.30 0.25 0.28 0000 --- --- --- --- 007211 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 007279 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 007318 00000 ------------ T 0.70 0.76 0.73 C 0.30 0.24 0.27 0000 --- --- --- --- 007341 00000 ------------ - 0.04 0.02 0.03 + 0.96 0.98 0.97 0000 --- --- --- --- 007444 00000 ------------ T 0.68 0.76 0.72 C 0.32 0.24 0.28 0000 --- --- --- --- 007504 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007596 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 007617 00000 ------------ T 0.70 0.76 0.73 C 0.30 0.24 0.27 0000 --- --- --- --- 007663 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007917 00000 ------------ G 0.67 0.89 0.78 A 0.33 0.11 0.22 0000 --- --- --- --- 008144 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008175 00000 ------------ C 0.98 0.85 0.91 A 0.02 0.15 0.09 0000 --- --- --- --- 008231 00000 ------------ G 0.81 0.61 0.71 A 0.19 0.39 0.29 0000 --- --- --- --- 008268 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 008442 00000 ------------ G 0.96 1.00 0.97 A 0.04 0.00 0.03 0000 --- --- --- --- 008489 00000 ------------ - 0.04 0.24 0.14 + 0.96 0.76 0.86 0000 --- --- --- --- 008637 00000 ------------ T 0.71 0.76 0.73 C 0.29 0.24 0.27 0000 --- --- --- --- 008673 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009179 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009273 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009286 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009561 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 009568 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009640 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010292 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010653 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 010747 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 010938 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 011140 00000 ------------ C 0.96 0.83 0.89 T 0.04 0.17 0.11 0000 --- --- --- --- 011318 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 011351 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 011424 00000 ------------ C 0.73 0.61 0.67 T 0.27 0.39 0.33 0000 --- --- --- --- 011483 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 011554 00000 ------------ - 0.27 0.11 0.19 + 0.73 0.89 0.81 0000 --- --- --- --- 011639 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 011786 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 011964 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012251 00000 ------------ G 0.88 0.78 0.83 A 0.12 0.22 0.17 0000 --- --- --- --- 012429 00000 ------------ G 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 012476 00000 ------------ G 0.88 0.78 0.83 A 0.12 0.22 0.17 0000 --- --- --- --- 012504 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 012722 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 012994 00000 ------------ C 0.92 0.96 0.94 G 0.08 0.04 0.06 0000 --- --- --- --- 013064 00000 ------------ C 0.69 0.89 0.79 T 0.31 0.11 0.21 0000 --- --- --- --- 013077 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013139 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013274 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013465 00000 ------------ G 0.94 0.82 0.88 A 0.06 0.18 0.12 0000 --- --- --- --- 013627 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 013635 00000 ------------ G 0.71 0.89 0.80 T 0.29 0.11 0.20 0000 --- --- --- --- 013852 00511 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 014026 00685 3' UTR G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 014234 00893 3' UTR G 0.96 0.85 0.90 A 0.04 0.15 0.10 0000 --- --- --- --- 014408 01067 3' UTR C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 014621 01280 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014722 01381 3' UTR G 0.95 0.75 0.85 C 0.05 0.25 0.15 0000 --- --- --- --- 015187 01846 3' UTR T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 015345 02004 3' UTR T 0.93 0.73 0.83 C 0.07 0.27 0.17 0000 --- --- --- --- 015863 02522 3' UTR C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 016216 02875 3' UTR A 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 016231 02890 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016244 02903 3' UTR A 0.58 0.76 0.67 G 0.42 0.24 0.33 0000 --- --- --- --- 016283 02942 3' UTR G 0.65 0.37 0.51 C 0.35 0.63 0.49 0000 --- --- --- --- 016470 03129 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016515 03174 3' UTR T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 016650 03309 3' UTR T 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 016752 03411 3' UTR A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 016980 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017224 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 017340 00000 ------------ C 0.95 0.83 0.89 T 0.05 0.17 0.11 0000 --- --- --- --- 017613 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 018191 00000 ------------ G 0.71 0.89 0.80 A 0.29 0.11 0.20 0000 --- --- --- --- 018322 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018323 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 018537 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018567 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018729 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001082: TTAC 004804: GTTAGA 007341: TTGAAG 008489: GA 009640: T 011554: CCAGC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000132 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000311 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000517 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 000602 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 000720 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 000877 00000 ------------ C 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 000975 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001891 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001957 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002369 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002594 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002782 00000 ------------ C 0.94 0.82 0.88 T 0.06 0.18 0.12 0000 --- --- --- --- 002996 00000 ------------ A 1.00 0.90 0.96 C 0.00 0.10 0.04 0000 --- --- --- --- 003570 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 003684 00000 ------------ T 0.45 0.80 0.62 C 0.55 0.20 0.38 0000 --- --- --- --- 004139 00000 ------------ T 0.88 0.41 0.65 A 0.12 0.59 0.35 0000 --- --- --- --- 004604 00502 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0138 ATC ATT ILE(I) ILE(I) 005278 01176 3' UTR G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005679 01577 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005837 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006474 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 007112 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000128 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000270 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 000294 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000451 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000459 00000 ------------ A 0.98 0.87 0.92 G 0.02 0.13 0.08 0000 --- --- --- --- 000670 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001192 00201 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001270 00279 5' UTR T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002136 00000 ------------ G 0.96 0.86 0.91 A 0.04 0.14 0.09 0000 --- --- --- --- 002231 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 002429 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002459 00000 ------------ C 0.33 0.86 0.59 T 0.67 0.14 0.41 0000 --- --- --- --- 002813 00000 ------------ A 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 002828 00000 ------------ C 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 002839 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 002869 00000 ------------ T 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 002870 00000 ------------ G 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 002932 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002942 00000 ------------ T 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 002947 00000 ------------ T 0.79 0.93 0.86 C 0.21 0.07 0.14 0000 --- --- --- --- 002959 00000 ------------ C 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 002961 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 002982 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 002990 00000 ------------ G 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 003001 00000 ------------ T 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 003543 00000 ------------ C 0.94 1.00 0.98 T 0.06 0.00 0.02 0000 --- --- --- --- 003860 00000 ------------ G 0.77 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 004223 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 004772 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004774 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004954 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005571 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005577 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 005752 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006025 00774 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0154 ATC ATT ILE(I) ILE(I) 006943 00000 ------------ G 0.33 0.80 0.57 A 0.67 0.20 0.43 0000 --- --- --- --- 006985 00000 ------------ A 0.33 0.80 0.56 T 0.67 0.20 0.44 0000 --- --- --- --- 007327 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 007386 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 007781 00000 ------------ C 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 007782 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008004 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008081 00000 ------------ A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 008139 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008350 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008442 01281 SYNON C 0.40 0.80 0.60 T 0.60 0.20 0.40 0323 CAC CAT HIS(H) HIS(H) 008599 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 008912 00000 ------------ A 0.81 0.93 0.87 G 0.19 0.07 0.13 0000 --- --- --- --- 008994 00000 ------------ T 0.33 0.80 0.56 G 0.67 0.20 0.44 0000 --- --- --- --- 009322 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009346 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009375 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 009496 00000 ------------ G 0.94 0.95 0.95 A 0.06 0.05 0.05 0000 --- --- --- --- 009514 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009666 00000 ------------ G 0.33 0.82 0.57 C 0.67 0.18 0.43 0000 --- --- --- --- 009913 01613 NON-SYN T 0.65 0.91 0.78 C 0.35 0.09 0.22 0434 TTC TCC PHE(F) SER(S) 009926 01626 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0438 CCG CCA PRO(P) PRO(P) 010181 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 010302 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010414 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010784 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011054 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 011199 00000 ------------ T 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 011216 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011285 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 011316 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011320 00000 ------------ G 0.83 0.95 0.89 A 0.17 0.05 0.11 0000 --- --- --- --- 011460 00000 ------------ G 1.00 0.94 0.97 A 0.00 0.06 0.03 0000 --- --- --- --- 011479 00000 ------------ G 0.33 0.78 0.55 A 0.67 0.23 0.45 0000 --- --- --- --- 011506 00000 ------------ G 0.93 0.85 0.89 A 0.07 0.15 0.11 0000 --- --- --- --- 011630 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011908 00000 ------------ C 0.83 0.95 0.89 G 0.17 0.05 0.11 0000 --- --- --- --- 011963 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 012111 00000 ------------ G 0.34 0.79 0.55 C 0.66 0.21 0.45 0000 --- --- --- --- 012247 00000 ------------ T 0.83 0.92 0.88 C 0.17 0.08 0.12 0000 --- --- --- --- 012268 00000 ------------ C 0.95 0.87 0.91 T 0.05 0.13 0.09 0000 --- --- --- --- 012284 00000 ------------ A 0.95 0.87 0.91 G 0.05 0.13 0.09 0000 --- --- --- --- 012292 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 012294 00000 ------------ T 0.95 0.87 0.91 A 0.05 0.13 0.09 0000 --- --- --- --- 012383 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 012436 01686 SYNON T 0.33 0.86 0.59 C 0.67 0.14 0.41 0458 ATT ATC ILE(I) ILE(I) 012523 01773 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0487 ATC ATT ILE(I) ILE(I) 012683 01933 3' UTR A 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 012896 02146 3' UTR A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 012999 02249 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013062 02312 3' UTR G 0.46 0.93 0.68 A 0.54 0.07 0.32 0000 --- --- --- --- 013071 02321 3' UTR G 0.35 0.89 0.61 C 0.65 0.11 0.39 0000 --- --- --- --- 013077 02327 3' UTR T 0.35 0.89 0.61 C 0.65 0.11 0.39 0000 --- --- --- --- 013131 02381 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013145 02395 3' UTR A 0.35 0.89 0.61 G 0.65 0.11 0.39 0000 --- --- --- --- 013179 02429 3' UTR T 0.35 0.89 0.61 C 0.65 0.11 0.39 0000 --- --- --- --- 013180 02430 3' UTR G 0.35 0.89 0.61 A 0.65 0.11 0.39 0000 --- --- --- --- 013205 02455 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013211 02461 3' UTR - 0.45 0.11 0.28 + 0.55 0.89 0.72 0000 --- --- --- --- 013216 02466 3' UTR C 0.58 0.89 0.73 A 0.42 0.11 0.27 0000 --- --- --- --- 013281 02531 3' UTR C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013309 02559 3' UTR C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 013349 02599 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013351 02601 3' UTR G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 013402 02652 3' UTR A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013403 02653 3' UTR C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013451 02701 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014056 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000270: A 004954: CTTTTTTCTATT 013211: ACC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000201 00000 ------------ T 0.70 0.60 0.63 C 0.30 0.40 0.37 0000 --- --- --- --- 000527 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000771 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 001087 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001088 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001407 00000 ------------ A 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 001487 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001626 00000 ------------ T 0.69 0.89 0.79 C 0.31 0.11 0.21 0000 --- --- --- --- 001722 00000 ------------ T 0.71 0.50 0.60 C 0.29 0.50 0.40 0000 --- --- --- --- 001880 00000 ------------ C 0.80 0.91 0.85 A 0.20 0.09 0.15 0000 --- --- --- --- 001881 00000 ------------ C 0.80 0.91 0.85 T 0.20 0.09 0.15 0000 --- --- --- --- 001887 00000 ------------ C 0.91 0.89 0.90 A 0.09 0.11 0.10 0000 --- --- --- --- 002151 00022 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002153 00024 5' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 002192 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002212 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 002324 00000 ------------ - 0.08 0.50 0.32 + 0.92 0.50 0.68 0000 --- --- --- --- 002507 00000 ------------ T 0.68 0.91 0.80 C 0.32 0.09 0.20 0000 --- --- --- --- 002521 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002550 00000 ------------ G 0.79 0.91 0.85 C 0.21 0.09 0.15 0000 --- --- --- --- 002555 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002575 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 002585 00000 ------------ T 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 002617 00070 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0007 TCC TAC SER(S) TYR(Y) 002631 00084 NON-SYN T 0.79 0.89 0.84 G 0.21 0.11 0.16 0012 TGG GGG TRP(W) GLY(G) 002762 00215 SYNON A 0.72 0.89 0.80 G 0.28 0.11 0.20 0055 CCA CCG PRO(P) PRO(P) 002920 00000 ------------ A 0.87 0.90 0.89 G 0.13 0.10 0.11 0000 --- --- --- --- 002984 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003115 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 003197 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003235 00000 ------------ T 0.80 0.89 0.85 C 0.20 0.11 0.15 0000 --- --- --- --- 003249 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 004416 00000 ------------ A 0.86 0.89 0.87 G 0.14 0.11 0.13 0000 --- --- --- --- 004482 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 004614 00296 SYNON C 0.86 0.89 0.87 T 0.14 0.11 0.13 0082 GCC GCT ALA(A) ALA(A) 005412 00000 ------------ T 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005453 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005503 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005506 00000 ------------ C 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 005624 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005679 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005727 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 005731 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005750 00000 ------------ C 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 005751 00000 ------------ C 0.85 0.89 0.87 G 0.15 0.11 0.13 0000 --- --- --- --- 005785 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005795 00000 ------------ T 0.85 0.89 0.87 C 0.15 0.11 0.13 0000 --- --- --- --- 005831 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005842 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 005867 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 005904 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005923 00000 ------------ G 0.83 0.91 0.87 A 0.17 0.09 0.13 0000 --- --- --- --- 006008 00000 ------------ A 0.82 0.89 0.85 G 0.18 0.11 0.15 0000 --- --- --- --- 006024 00000 ------------ G 0.77 0.89 0.83 A 0.23 0.11 0.17 0000 --- --- --- --- 006047 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 006227 00000 ------------ G 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 006262 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 006489 00000 ------------ T 0.83 0.75 0.79 C 0.17 0.25 0.21 0000 --- --- --- --- 006545 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 006598 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 006631 00000 ------------ G 0.70 0.89 0.80 C 0.30 0.11 0.20 0000 --- --- --- --- 006656 00000 ------------ T 0.84 0.89 0.87 A 0.16 0.11 0.13 0000 --- --- --- --- 007639 00398 SYNON C 0.98 1.00 0.99 G 0.02 0.00 0.01 0116 GCC GCG ALA(A) ALA(A) 008104 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008207 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008371 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 008425 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008490 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008506 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 008523 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008665 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008730 00000 ------------ G 0.83 0.90 0.86 A 0.17 0.10 0.14 0000 --- --- --- --- 009175 00000 ------------ A 0.44 0.61 0.52 C 0.56 0.39 0.48 0000 --- --- --- --- 009217 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009237 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009287 00000 ------------ T 0.44 0.61 0.52 C 0.56 0.39 0.48 0000 --- --- --- --- 009293 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009398 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 009428 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009549 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009638 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009643 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 009812 00604 NON-SYN G 0.98 0.96 0.97 T 0.02 0.04 0.03 0185 GGT GTT GLY(G) VAL(V) 009986 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 010003 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010418 00000 ------------ A 0.59 0.39 0.50 T 0.41 0.61 0.50 0000 --- --- --- --- 010517 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 010707 00881 SYNON T 0.97 1.00 0.99 C 0.03 0.00 0.01 0277 ACT ACC THR(T) THR(T) 010861 00000 ------------ A 0.69 0.71 0.70 G 0.31 0.29 0.30 0000 --- --- --- --- 013891 00000 ------------ - 0.61 0.36 0.48 + 0.39 0.64 0.52 0000 --- --- --- --- 014121 00000 ------------ G 0.95 0.89 0.92 A 0.05 0.11 0.08 0000 --- --- --- --- 014208 01079 SYNON C 0.76 0.52 0.64 T 0.24 0.48 0.36 0343 CAC CAT HIS(H) HIS(H) 014304 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 014348 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014443 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 014531 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 014546* 014596 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 014680 00000 ------------ A 0.81 0.75 0.78 T 0.19 0.25 0.22 0000 --- --- --- --- 014737 00000 ------------ T 0.90 0.89 0.89 C 0.10 0.11 0.11 0000 --- --- --- --- 014784 00000 ------------ C 0.71 0.72 0.71 T 0.29 0.28 0.29 0000 --- --- --- --- 015021* 015055 00000 ------------ T 0.44 0.61 0.52 G 0.56 0.39 0.48 0000 --- --- --- --- 015101 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015127 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 015180 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015241 00000 ------------ G 0.91 0.90 0.91 A 0.09 0.10 0.09 0000 --- --- --- --- 015275 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 015581 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 015620 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015734 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015790 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015793 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015881 00000 ------------ C 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 015996 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 016105 00000 ------------ T 0.60 0.61 0.61 C 0.40 0.39 0.39 0000 --- --- --- --- 016283 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 016299 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 016358 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016536 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 016551 00000 ------------ A 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 016597 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017040 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 017074 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017429 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017638 00000 ------------ - 0.83 0.76 0.80 + 0.17 0.24 0.20 0000 --- --- --- --- 018248 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 018354 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018709 00000 ------------ C 0.90 1.00 0.94 T 0.10 0.00 0.06 0000 --- --- --- --- 019114 00000 ------------ G 0.85 0.80 0.82 C 0.15 0.20 0.18 0000 --- --- --- --- 019352 00000 ------------ G 0.77 0.52 0.64 A 0.23 0.48 0.36 0000 --- --- --- --- 019508 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019595 00000 ------------ G 0.71 0.59 0.65 A 0.29 0.41 0.35 0000 --- --- --- --- 020518 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 020597 01347 NON-SYN G 0.91 0.83 0.87 A 0.09 0.17 0.13 0433 GTG ATG VAL(V) MET(M) 020900 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020980 00000 ------------ C 0.43 0.70 0.57 T 0.57 0.30 0.43 0000 --- --- --- --- 021157 00000 ------------ A 0.86 0.79 0.82 T 0.14 0.21 0.18 0000 --- --- --- --- 021439 01605 NON-SYN C 0.83 0.93 0.88 A 0.17 0.07 0.12 0519 CTG ATG LEU(L) MET(M) 021574 01740 3' UTR T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 021623 01789 3' UTR G 0.70 0.52 0.61 A 0.30 0.48 0.39 0000 --- --- --- --- 021844 02010 3' UTR C 0.73 0.52 0.63 T 0.27 0.48 0.37 0000 --- --- --- --- 021861 02027 3' UTR G 0.85 0.93 0.89 A 0.15 0.07 0.11 0000 --- --- --- --- 021988 02154 3' UTR G 0.83 0.75 0.79 C 0.17 0.25 0.21 0000 --- --- --- --- 022274 00000 ------------ - 0.19 0.22 0.20 + 0.81 0.78 0.80 0000 --- --- --- --- 022370 00000 ------------ A 0.80 0.81 0.81 G 0.20 0.19 0.19 0000 --- --- --- --- 022446 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 022608 00000 ------------ C 0.84 0.76 0.80 G 0.16 0.24 0.20 0000 --- --- --- --- 022627 00000 ------------ G 0.98 0.88 0.93 A 0.02 0.12 0.07 0000 --- --- --- --- 023061 00000 ------------ C 0.88 0.80 0.84 T 0.12 0.20 0.16 0000 --- --- --- --- 023062 00000 ------------ G 0.72 0.53 0.62 A 0.28 0.47 0.38 0000 --- --- --- --- 023087 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 023091 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 023123 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023291 00000 ------------ T 0.86 0.79 0.82 C 0.14 0.21 0.18 0000 --- --- --- --- 023331 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 023421 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002212: G 002324: CA 009549: AG 009986: A 010003: GGA 013891: G 014546: C 015581: A 017638: ATATATATTAGAGGTACAATGTGATGTTATGATGTATGTATACAACCTGAAATTATTAAATCAAGGTAATGAACAAATCCATCACTTCATATATTTATCATTTTTATGTTGAGAACAT 022274: AA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 014546 - 0.18 0.24 0.21 C 0.75 0.76 0.76 T 0.07 0.00 0.03 015021 A 0.04 0.11 0.07 C 0.04 0.00 0.02 G 0.92 0.89 0.90 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001097 00000 ------------ A 0.57 0.74 0.64 G 0.43 0.26 0.36 0000 --- --- --- --- 001185 00000 ------------ A 0.76 0.68 0.72 G 0.24 0.32 0.28 0000 --- --- --- --- 001602 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001699 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001860 00000 ------------ C 0.74 0.57 0.66 T 0.26 0.43 0.34 0000 --- --- --- --- 002191 00000 ------------ T 0.77 0.62 0.70 G 0.23 0.38 0.30 0000 --- --- --- --- 002317 00000 ------------ G 0.88 0.83 0.86 A 0.12 0.17 0.14 0000 --- --- --- --- 002431 00000 ------------ C 0.89 0.80 0.84 T 0.11 0.20 0.16 0000 --- --- --- --- 002944 00000 ------------ C 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 002975 00000 ------------ G 0.89 0.78 0.84 T 0.11 0.22 0.16 0000 --- --- --- --- 003068 00000 ------------ C 0.84 0.67 0.76 T 0.16 0.33 0.24 0000 --- --- --- --- 003087 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 003161 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003233 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 003633 00000 ------------ C 1.00 0.92 0.96 T 0.00 0.08 0.04 0000 --- --- --- --- 003635 00000 ------------ T 0.85 0.66 0.76 C 0.15 0.34 0.24 0000 --- --- --- --- 003639 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003717 00000 ------------ C 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 003977 00000 ------------ G 0.70 0.45 0.58 A 0.30 0.55 0.42 0000 --- --- --- --- 004020 00000 ------------ - 0.77 0.59 0.68 + 0.23 0.41 0.32 0000 --- --- --- --- 004053 00000 ------------ A 0.63 0.43 0.53 G 0.37 0.57 0.47 0000 --- --- --- --- 004098 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004235 00000 ------------ - 0.10 0.23 0.16 + 0.90 0.78 0.84 0000 --- --- --- --- 005187 00000 ------------ G 0.72 0.46 0.58 A 0.28 0.54 0.42 0000 --- --- --- --- 005202 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005245 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 005269 00000 ------------ T 0.70 0.46 0.58 C 0.30 0.54 0.42 0000 --- --- --- --- 005406 00000 ------------ A 0.72 0.46 0.59 G 0.28 0.54 0.41 0000 --- --- --- --- 005686 00000 ------------ C 0.73 0.45 0.59 G 0.27 0.55 0.41 0000 --- --- --- --- 005702 00000 ------------ - 0.28 0.54 0.41 + 0.72 0.46 0.59 0000 --- --- --- --- 005739 00000 ------------ C 0.83 0.65 0.74 T 0.17 0.35 0.26 0000 --- --- --- --- 006137 00000 ------------ C 0.73 0.46 0.60 T 0.27 0.54 0.40 0000 --- --- --- --- 006341 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006461 00000 ------------ C 0.83 0.65 0.74 A 0.17 0.35 0.26 0000 --- --- --- --- 006780 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007059 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 007268 00000 ------------ T 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 007725 00000 ------------ A 0.81 0.46 0.62 T 0.19 0.54 0.38 0000 --- --- --- --- 007825 00000 ------------ G 0.81 0.48 0.64 A 0.19 0.52 0.36 0000 --- --- --- --- 007940 00000 ------------ T 0.81 0.46 0.62 C 0.19 0.54 0.38 0000 --- --- --- --- 008100 00000 ------------ - 0.83 1.00 0.92 + 0.17 0.00 0.08 0000 --- --- --- --- 008225 00000 ------------ C 0.91 0.65 0.78 T 0.09 0.35 0.22 0000 --- --- --- --- 008695 00000 ------------ C 0.83 0.64 0.74 A 0.17 0.36 0.26 0000 --- --- --- --- 009229 00000 ------------ C 0.76 0.50 0.62 T 0.24 0.50 0.38 0000 --- --- --- --- 009512 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009855 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 010062 00000 ------------ C 0.35 0.70 0.52 T 0.65 0.30 0.48 0000 --- --- --- --- 010107 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 010126 00000 ------------ A 0.33 0.70 0.51 G 0.67 0.30 0.49 0000 --- --- --- --- 010351 00659 SYNON G 0.94 0.89 0.91 A 0.06 0.11 0.09 0203 CTG CTA LEU(L) LEU(L) 010429 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010445 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010511 00000 ------------ C 0.79 0.80 0.80 T 0.21 0.20 0.20 0000 --- --- --- --- 010875 00000 ------------ T 0.70 0.46 0.58 C 0.30 0.54 0.42 0000 --- --- --- --- 011179 00856 NON-SYN C 0.95 0.78 0.86 A 0.05 0.22 0.14 0269 GCC GAC ALA(A) ASP(D) 011181 00858 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0270 GTC ATC VAL(V) ILE(I) 011185 00862 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0271 ATC ACC ILE(I) THR(T) 011204 00881 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0277 ACC ACT THR(T) THR(T) 011372 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 012005 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 012975 00000 ------------ A 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 013010 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 013182 00000 ------------ - 0.90 0.78 0.84 + 0.10 0.22 0.16 0000 --- --- --- --- 013241 00000 ------------ T 0.90 0.82 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 013403 00000 ------------ - 0.80 0.68 0.74 + 0.20 0.32 0.26 0000 --- --- --- --- 013551 00000 ------------ T 0.81 0.67 0.74 A 0.19 0.33 0.26 0000 --- --- --- --- 013573 00000 ------------ G 0.81 0.67 0.74 C 0.19 0.33 0.26 0000 --- --- --- --- 013705 00992 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0314 TCC TCT SER(S) SER(S) 013823 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 013880 00000 ------------ A 0.89 0.80 0.85 C 0.11 0.20 0.15 0000 --- --- --- --- 013994 01094 SYNON G 0.91 0.80 0.86 A 0.09 0.20 0.14 0348 CCG CCA PRO(P) PRO(P) 014024 01124 SYNON A 0.67 0.48 0.58 G 0.33 0.52 0.42 0358 GTA GTG VAL(V) VAL(V) 014078 00000 ------------ G 0.91 0.89 0.90 A 0.09 0.11 0.10 0000 --- --- --- --- 014101 00000 ------------ G 0.89 0.83 0.86 C 0.11 0.17 0.14 0000 --- --- --- --- 014232 00000 ------------ C 0.89 0.78 0.84 G 0.11 0.22 0.16 0000 --- --- --- --- 014296 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014301 00000 ------------ A 0.89 0.80 0.85 T 0.11 0.20 0.15 0000 --- --- --- --- 014374 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 014433 00000 ------------ T 0.80 0.67 0.73 C 0.20 0.33 0.27 0000 --- --- --- --- 014523 00000 ------------ T 0.68 0.45 0.57 C 0.32 0.55 0.43 0000 --- --- --- --- 014619 00000 ------------ C 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 014711 00000 ------------ G 0.91 0.77 0.84 A 0.09 0.23 0.16 0000 --- --- --- --- 014817 00000 ------------ G 0.82 0.66 0.74 A 0.18 0.34 0.26 0000 --- --- --- --- 015075 00000 ------------ - 0.23 0.50 0.34 + 0.78 0.50 0.66 0000 --- --- --- --- 015174 00000 ------------ T 0.75 0.53 0.64 C 0.25 0.47 0.36 0000 --- --- --- --- 015197 00000 ------------ - 0.09 0.17 0.13 + 0.91 0.83 0.87 0000 --- --- --- --- 015241 00000 ------------ T 0.93 0.91 0.92 C 0.07 0.09 0.08 0000 --- --- --- --- 015244 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015246 00000 ------------ T 0.84 0.67 0.76 C 0.16 0.33 0.24 0000 --- --- --- --- 015259 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 015265 00000 ------------ C 0.80 0.67 0.74 T 0.20 0.33 0.26 0000 --- --- --- --- 015317 00000 ------------ C 0.91 0.83 0.87 T 0.09 0.17 0.13 0000 --- --- --- --- 015465 00000 ------------ C 0.84 0.67 0.76 T 0.16 0.33 0.24 0000 --- --- --- --- 015860 00000 ------------ C 0.86 0.67 0.76 A 0.14 0.33 0.24 0000 --- --- --- --- 015903 00000 ------------ G 0.95 0.83 0.88 A 0.05 0.17 0.12 0000 --- --- --- --- 016073 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016112 00000 ------------ G 0.91 0.81 0.86 A 0.09 0.19 0.14 0000 --- --- --- --- 016126 00000 ------------ C 0.91 0.81 0.86 A 0.09 0.19 0.14 0000 --- --- --- --- 016373 00000 ------------ G 0.97 0.80 0.88 A 0.03 0.20 0.12 0000 --- --- --- --- 016517 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 016579 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 016723 00000 ------------ A 0.68 0.45 0.56 G 0.32 0.55 0.44 0000 --- --- --- --- 016774 00000 ------------ A 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 016818 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016819 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 016913 00000 ------------ A 0.69 0.80 0.74 G 0.31 0.20 0.26 0000 --- --- --- --- 016955 00000 ------------ A 0.81 0.67 0.74 G 0.19 0.33 0.26 0000 --- --- --- --- 017170 00000 ------------ C 0.48 0.74 0.61 T 0.52 0.26 0.39 0000 --- --- --- --- 017198 00000 ------------ G 0.80 0.65 0.73 C 0.20 0.35 0.27 0000 --- --- --- --- 018114 00000 ------------ A 0.87 0.68 0.77 C 0.13 0.33 0.23 0000 --- --- --- --- 018115 00000 ------------ G 0.92 0.68 0.79 A 0.08 0.33 0.21 0000 --- --- --- --- 018274 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018303 00000 ------------ C 0.92 0.85 0.88 G 0.08 0.15 0.12 0000 --- --- --- --- 018311 00000 ------------ T 0.90 0.85 0.87 A 0.10 0.15 0.13 0000 --- --- --- --- 018477 00000 ------------ C 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 018491 00000 ------------ G 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 018618 00000 ------------ G 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 018779 00000 ------------ - 0.73 0.59 0.66 + 0.27 0.41 0.34 0000 --- --- --- --- 018803 00000 ------------ T 0.94 0.83 0.88 C 0.06 0.17 0.12 0000 --- --- --- --- 018976 00000 ------------ T 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 019095 00000 ------------ C 0.80 0.67 0.74 A 0.20 0.33 0.26 0000 --- --- --- --- 019097 00000 ------------ T 0.80 0.67 0.74 C 0.20 0.33 0.26 0000 --- --- --- --- 019557 00000 ------------ A 0.73 0.48 0.60 C 0.27 0.52 0.40 0000 --- --- --- --- 019574 00000 ------------ C 0.68 0.48 0.58 A 0.32 0.52 0.42 0000 --- --- --- --- 019683 00000 ------------ C 0.72 0.48 0.60 G 0.28 0.52 0.40 0000 --- --- --- --- 019753 00000 ------------ G 0.72 0.48 0.60 A 0.28 0.52 0.40 0000 --- --- --- --- 019782 00000 ------------ C 0.61 0.77 0.69 T 0.39 0.23 0.31 0000 --- --- --- --- 019785 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019833 00000 ------------ T 0.73 0.48 0.61 G 0.27 0.52 0.39 0000 --- --- --- --- 019834 00000 ------------ T 0.73 0.48 0.61 C 0.27 0.52 0.39 0000 --- --- --- --- 019929 00000 ------------ G 0.83 0.67 0.76 A 0.17 0.33 0.24 0000 --- --- --- --- 019968 00000 ------------ A 0.63 0.83 0.73 G 0.37 0.17 0.27 0000 --- --- --- --- 020011 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 020017 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 020079 00000 ------------ G 0.72 0.45 0.58 A 0.28 0.55 0.42 0000 --- --- --- --- 020090 00000 ------------ C 1.00 0.91 0.95 T 0.00 0.09 0.05 0000 --- --- --- --- 020109 00000 ------------ T 0.72 0.43 0.56 A 0.28 0.57 0.44 0000 --- --- --- --- 020131 00000 ------------ C 0.95 0.89 0.92 G 0.05 0.11 0.08 0000 --- --- --- --- 020152 00000 ------------ - 0.72 0.45 0.57 + 0.28 0.55 0.43 0000 --- --- --- --- 020153 00000 ------------ C 0.70 0.46 0.58 T 0.30 0.54 0.42 0000 --- --- --- --- 020158 00000 ------------ T 0.75 0.48 0.61 G 0.25 0.52 0.39 0000 --- --- --- --- 020161 00000 ------------ G 0.71 0.48 0.59 C 0.29 0.52 0.41 0000 --- --- --- --- 020176 00000 ------------ T 0.76 0.48 0.61 G 0.24 0.52 0.39 0000 --- --- --- --- 020269 00000 ------------ A 0.72 0.59 0.65 C 0.28 0.41 0.35 0000 --- --- --- --- 020296 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 020316 00000 ------------ C 0.80 0.59 0.70 T 0.20 0.41 0.30 0000 --- --- --- --- 020322 00000 ------------ T 0.83 0.65 0.74 C 0.17 0.35 0.26 0000 --- --- --- --- 020324 00000 ------------ C 0.78 0.65 0.72 T 0.22 0.35 0.28 0000 --- --- --- --- 020330 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 020331 00000 ------------ T 0.80 0.59 0.70 A 0.20 0.41 0.30 0000 --- --- --- --- 020491 01605 FRAME SHIFT - 0.02 0.00 0.01 + 0.98 1.00 0.99 0519 -TG CTG --- --- 020675 01789 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 020694 01808 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 020722 01836 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020767 01881 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021004 02118 3' UTR C 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 021056 02170 3' UTR G 0.98 0.91 0.94 A 0.02 0.09 0.06 0000 --- --- --- --- 021088 02202 3' UTR A 0.80 0.62 0.72 G 0.20 0.38 0.28 0000 --- --- --- --- 021332 02446 3' UTR - 0.56 0.26 0.42 + 0.44 0.74 0.58 0000 --- --- --- --- 021419 02533 3' UTR G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 021436 02550 3' UTR - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 021439 02553 3' UTR T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 021556 02670 3' UTR G 0.80 0.55 0.68 T 0.20 0.45 0.32 0000 --- --- --- --- 021559 02673 3' UTR C 0.83 0.55 0.69 G 0.17 0.45 0.31 0000 --- --- --- --- 021563 02677 3' UTR C 0.83 0.55 0.69 T 0.17 0.45 0.31 0000 --- --- --- --- 021677 02791 3' UTR - 0.20 0.38 0.29 + 0.80 0.62 0.71 0000 --- --- --- --- 021910 03024 3' UTR T 0.88 0.68 0.76 C 0.12 0.33 0.24 0000 --- --- --- --- 021943 03057 3' UTR A 0.74 0.59 0.66 T 0.26 0.41 0.34 0000 --- --- --- --- 022031 03145 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 022040 03154 3' UTR A 0.84 0.59 0.72 G 0.16 0.41 0.28 0000 --- --- --- --- 022081 03195 3' UTR T 0.83 0.59 0.71 C 0.17 0.41 0.29 0000 --- --- --- --- 022116 03230 3' UTR T 0.83 0.59 0.71 C 0.17 0.41 0.29 0000 --- --- --- --- 022117 03231 3' UTR G 0.98 0.91 0.94 T 0.02 0.09 0.06 0000 --- --- --- --- 022119 03233 3' UTR C 0.83 0.59 0.71 T 0.17 0.41 0.29 0000 --- --- --- --- 022279 03393 3' UTR T 0.71 0.59 0.65 C 0.29 0.41 0.35 0000 --- --- --- --- 022286 03400 3' UTR A 0.74 0.67 0.71 G 0.26 0.33 0.29 0000 --- --- --- --- 022416 03530 3' UTR - 0.72 0.59 0.66 + 0.28 0.41 0.34 0000 --- --- --- --- 022473 03587 3' UTR C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 022474 03588 3' UTR G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 022541 03655 3' UTR G 0.71 0.59 0.65 T 0.29 0.41 0.35 0000 --- --- --- --- 022685 03799 3' UTR A 0.62 0.39 0.51 T 0.38 0.61 0.49 0000 --- --- --- --- 022722 03836 3' UTR A 0.62 0.39 0.51 G 0.38 0.61 0.49 0000 --- --- --- --- 022770 03884 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022807 03921 3' UTR T 0.42 0.61 0.51 A 0.58 0.39 0.49 0000 --- --- --- --- 022829 03943 3' UTR T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 022838 03952 3' UTR T 0.62 0.39 0.51 C 0.38 0.61 0.49 0000 --- --- --- --- 022856 03970 3' UTR G 0.62 0.39 0.51 A 0.38 0.61 0.49 0000 --- --- --- --- 022872 03986 3' UTR A 0.62 0.39 0.51 T 0.38 0.61 0.49 0000 --- --- --- --- 023024 04138 3' UTR T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 023025 04139 3' UTR G 0.62 0.39 0.51 A 0.38 0.61 0.49 0000 --- --- --- --- 023030 04144 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023043 04157 3' UTR T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 023046 04160 3' UTR A 0.62 0.39 0.51 G 0.38 0.61 0.49 0000 --- --- --- --- 023384 04498 3' UTR C 0.41 0.61 0.51 G 0.59 0.39 0.49 0000 --- --- --- --- 023573 04687 3' UTR - 0.02 0.07 0.05 + 0.98 0.93 0.95 0000 --- --- --- --- 023619 04733 3' UTR - 0.31 0.55 0.44 + 0.69 0.45 0.56 0000 --- --- --- --- 023625 04739 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023648 04762 3' UTR T 0.62 0.39 0.51 C 0.38 0.61 0.49 0000 --- --- --- --- 023678 04792 3' UTR G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 023736 04850 3' UTR A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 023780 04894 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024224 00000 ------------ G 0.64 0.41 0.52 A 0.36 0.59 0.48 0000 --- --- --- --- 024259 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024368 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024550 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 024765 00000 ------------ C 0.93 0.80 0.87 T 0.07 0.20 0.13 0000 --- --- --- --- 024914 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 024970 00000 ------------ T 0.72 0.39 0.55 A 0.28 0.61 0.45 0000 --- --- --- --- 025021 00000 ------------ G 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 025215 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 025284 00000 ------------ T 0.83 0.67 0.76 G 0.17 0.33 0.24 0000 --- --- --- --- 025287 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025383 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 025388 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025476 00000 ------------ T 0.91 0.80 0.86 G 0.09 0.20 0.14 0000 --- --- --- --- 025519 00000 ------------ C 0.68 0.38 0.53 T 0.32 0.62 0.47 0000 --- --- --- --- 025637 00000 ------------ G 0.93 0.89 0.90 T 0.07 0.11 0.10 0000 --- --- --- --- 025810 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004020: GGATGGAT 004235: ATAG 005702: GGA 008100: A 013182: AGAGAG 013403: T 015075: G 015197: A 016579: A 018779: ATT 020152: G 020491: C 021332: T 021436: AA 021677: TG 022416: CAAAA 023573: AGTATAT 023619: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 002049 00000 ------------ C 0.95 0.78 0.87 T 0.05 0.22 0.13 0000 --- --- --- --- 002124 00000 ------------ - 0.18 0.22 0.20 + 0.82 0.78 0.80 0000 --- --- --- --- 002333 00000 ------------ A 0.67 0.57 0.62 G 0.33 0.43 0.38 0000 --- --- --- --- 002462 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002522 00004 5' UTR - 0.83 1.00 0.91 + 0.17 0.00 0.09 0000 --- --- --- --- 002568 00050 5' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002879 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003082 00000 ------------ G 0.57 0.64 0.60 T 0.43 0.36 0.40 0000 --- --- --- --- 003436 00402 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0052 CGT CTT ARG(R) LEU(L) 003685 00000 ------------ - 0.98 0.98 0.98 + 0.02 0.02 0.02 0000 --- --- --- --- 003739 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003782 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003786 00000 ------------ C 0.84 0.61 0.73 T 0.16 0.39 0.27 0000 --- --- --- --- 004007 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004141 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004256 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 004348 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004367 00000 ------------ A 0.94 0.98 0.96 G 0.06 0.02 0.04 0000 --- --- --- --- 004402 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004553 00000 ------------ G 0.83 0.61 0.73 T 0.17 0.39 0.27 0000 --- --- --- --- 004646 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004656 00000 ------------ G 0.92 0.78 0.85 T 0.08 0.22 0.15 0000 --- --- --- --- 004731 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 004964 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 005468 00000 ------------ A 0.95 0.98 0.97 G 0.05 0.02 0.03 0000 --- --- --- --- 005487 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 005568 00541 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 0098 TGC TGT CYS(C) CYS(C) 006456 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 006932 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 007024 00000 ------------ - 0.04 0.22 0.13 + 0.96 0.78 0.87 0000 --- --- --- --- 007038 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 007460 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007699 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 007960 00000 ------------ T 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 008835 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008878 00000 ------------ A 0.75 0.71 0.73 T 0.25 0.29 0.27 0000 --- --- --- --- 009182 00000 ------------ T 0.98 0.95 0.96 G 0.02 0.05 0.04 0000 --- --- --- --- 009194 00000 ------------ C 0.66 0.64 0.65 T 0.34 0.36 0.35 0000 --- --- --- --- 009533 00000 ------------ C 0.66 0.64 0.65 G 0.34 0.36 0.35 0000 --- --- --- --- 009539 00000 ------------ C 0.73 0.77 0.75 T 0.27 0.23 0.25 0000 --- --- --- --- 010014 00000 ------------ C 0.75 0.75 0.75 T 0.25 0.25 0.25 0000 --- --- --- --- 010039 00000 ------------ G 0.75 0.75 0.75 T 0.25 0.25 0.25 0000 --- --- --- --- 010201 00000 ------------ C 0.75 0.75 0.75 A 0.25 0.25 0.25 0000 --- --- --- --- 010451 00000 ------------ A 0.98 0.93 0.95 G 0.02 0.07 0.05 0000 --- --- --- --- 010558 00000 ------------ T 0.76 0.78 0.77 C 0.24 0.23 0.23 0000 --- --- --- --- 010744 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 010804 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 010875 00000 ------------ G 0.75 0.80 0.77 C 0.25 0.20 0.23 0000 --- --- --- --- 011005 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011019 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 011053 00000 ------------ - 0.25 0.20 0.23 + 0.75 0.80 0.77 0000 --- --- --- --- 011100 00000 ------------ A 0.76 0.80 0.78 G 0.24 0.20 0.22 0000 --- --- --- --- 011389 00000 ------------ G 1.00 0.80 0.89 A 0.00 0.20 0.11 0000 --- --- --- --- 011650 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011714 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011865 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012337 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 012416 00000 ------------ A 0.78 0.78 0.78 C 0.23 0.23 0.23 0000 --- --- --- --- 012489 00000 ------------ - 0.78 0.72 0.75 + 0.23 0.28 0.25 0000 --- --- --- --- 012806 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012942 00000 ------------ C 0.70 0.53 0.62 T 0.30 0.47 0.38 0000 --- --- --- --- 013172 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 013377 00000 ------------ G 0.74 0.79 0.76 A 0.26 0.21 0.24 0000 --- --- --- --- 013776 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 013997 00000 ------------ G 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 014246 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014274 00000 ------------ A 0.73 0.83 0.78 G 0.27 0.17 0.22 0000 --- --- --- --- 014317 00000 ------------ T 0.73 0.83 0.78 C 0.27 0.17 0.22 0000 --- --- --- --- 015259 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 015296 00000 ------------ A 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 015702 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015767 00000 ------------ - 0.27 0.22 0.24 + 0.73 0.78 0.76 0000 --- --- --- --- 015921 00000 ------------ - 0.73 0.78 0.76 + 0.27 0.22 0.24 0000 --- --- --- --- 016033 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016162 00000 ------------ A 0.83 0.80 0.82 G 0.17 0.20 0.18 0000 --- --- --- --- 016198 00000 ------------ - 0.27 0.45 0.36 + 0.73 0.55 0.64 0000 --- --- --- --- 016350 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016400 00000 ------------ G 0.73 0.80 0.76 A 0.27 0.20 0.24 0000 --- --- --- --- 016407 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016470 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016620 00000 ------------ T 0.73 0.80 0.76 A 0.27 0.20 0.24 0000 --- --- --- --- 016692 00000 ------------ G 0.65 0.66 0.65 A 0.35 0.34 0.35 0000 --- --- --- --- 016938 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016957 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 017035 00000 ------------ T 0.73 0.82 0.77 C 0.27 0.18 0.23 0000 --- --- --- --- 017178 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017257 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017469 00000 ------------ C 0.83 0.82 0.83 T 0.17 0.18 0.17 0000 --- --- --- --- 017533 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017607 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018185 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018218 00000 ------------ G 0.73 0.80 0.76 A 0.27 0.20 0.24 0000 --- --- --- --- 018266 00000 ------------ A 0.73 0.78 0.76 G 0.27 0.22 0.24 0000 --- --- --- --- 018530 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 018943 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 020407 00000 ------------ G 0.93 0.98 0.96 A 0.07 0.02 0.04 0000 --- --- --- --- 020710* 020891 00000 ------------ G 0.78 0.79 0.78 A 0.22 0.21 0.22 0000 --- --- --- --- 021622 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 021860 00000 ------------ T 0.96 0.97 0.97 C 0.04 0.03 0.03 0000 --- --- --- --- 021897 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021956 00000 ------------ C 1.00 0.90 0.95 T 0.00 0.10 0.05 0000 --- --- --- --- 022018 00000 ------------ A 0.83 0.54 0.68 C 0.17 0.46 0.32 0000 --- --- --- --- 022900 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 023059 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023429 00000 ------------ C 0.73 0.57 0.65 A 0.27 0.43 0.35 0000 --- --- --- --- 023445 00000 ------------ A 0.90 0.98 0.93 C 0.10 0.02 0.07 0000 --- --- --- --- 023818 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024033 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024034 00000 ------------ A 0.83 0.78 0.81 G 0.17 0.22 0.19 0000 --- --- --- --- 024051 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 024172 00000 ------------ T 0.96 0.78 0.87 C 0.04 0.22 0.13 0000 --- --- --- --- 025029 00000 ------------ G 0.91 0.97 0.94 C 0.09 0.03 0.06 0000 --- --- --- --- 025302 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025369 00000 ------------ A 0.90 0.76 0.83 T 0.10 0.24 0.17 0000 --- --- --- --- 025475 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026671 00000 ------------ G 0.89 0.95 0.92 A 0.11 0.05 0.08 0000 --- --- --- --- 026810 00000 ------------ G 0.74 0.79 0.76 A 0.26 0.21 0.24 0000 --- --- --- --- 027063 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027093 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 027195 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 027196 00000 ------------ G 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 027753 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 028049 00000 ------------ T 0.85 0.61 0.73 C 0.15 0.39 0.27 0000 --- --- --- --- 028338 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 028426 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028461 00000 ------------ G 0.96 0.77 0.87 A 0.04 0.23 0.13 0000 --- --- --- --- 028975 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 029107 00000 ------------ C 0.68 0.66 0.67 T 0.32 0.34 0.33 0000 --- --- --- --- 029179 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 029252 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030700 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 030809 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030941 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 031167 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 031357 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 031525 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031865 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032169 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032214 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 033043 00000 ------------ G 0.73 0.57 0.65 A 0.27 0.43 0.35 0000 --- --- --- --- 033229 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033371 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 033664 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033687 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034266 00000 ------------ G 0.86 0.76 0.81 A 0.14 0.24 0.19 0000 --- --- --- --- 034418 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034688 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 034727 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 034958 00000 ------------ G 0.72 0.57 0.64 A 0.28 0.43 0.36 0000 --- --- --- --- 035714 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 035901 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 036132 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 036134 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036140 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036241 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 036412 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036695 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036900 00000 ------------ C 0.74 0.57 0.65 T 0.26 0.43 0.35 0000 --- --- --- --- 037249 00000 ------------ T 0.73 0.57 0.65 G 0.27 0.43 0.35 0000 --- --- --- --- 037401 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 038451 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 038491 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 038496 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038600 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 038713 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 038879 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038950 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039720 00000 ------------ A 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 039959 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 040091 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 040720 01484 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040829 01593 3' UTR A 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 041043 01807 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 041132 01896 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 041597 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 041937 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042135 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 042353 00000 ------------ G 0.71 0.39 0.55 A 0.29 0.61 0.45 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002124: CTTCCCCTCCTTCCCTAGTTA 002522: A 003685: TA 007024: AATT 007460: TATAAA 011053: C 012489: CA 015767: AA 015921: TCTTTAC 016198: TAGTT 023059: T 025302: TTTCT 031357: TT 034727: AA 038491: TA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 020710 A 0.10 0.00 0.05 C 0.83 1.00 0.91 T 0.06 0.00 0.03 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000100 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 000386 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001171 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 001185 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 001187 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001385 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001909 00000 ------------ - 0.19 0.00 0.10 + 0.81 1.00 0.90 0000 --- --- --- --- 001933 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002248 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002313 00000 ------------ G 0.70 0.98 0.84 C 0.30 0.02 0.16 0000 --- --- --- --- 002371 00000 ------------ A 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 002474 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002785 00000 ------------ C 0.68 0.98 0.83 G 0.32 0.02 0.17 0000 --- --- --- --- 002800 00000 ------------ A 0.68 0.98 0.83 T 0.32 0.02 0.17 0000 --- --- --- --- 002820 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003026 00000 ------------ A 0.68 0.98 0.83 T 0.32 0.02 0.17 0000 --- --- --- --- 003079 00000 ------------ G 0.57 0.98 0.77 T 0.43 0.02 0.23 0000 --- --- --- --- 004405 00000 ------------ - 0.62 0.97 0.80 + 0.38 0.03 0.20 0000 --- --- --- --- 004802 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004890 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005171 00000 ------------ G 0.71 0.98 0.84 C 0.29 0.02 0.16 0000 --- --- --- --- 005334 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 005427 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005500 00000 ------------ C 0.61 0.98 0.79 T 0.39 0.02 0.21 0000 --- --- --- --- 005698 00000 ------------ C 0.87 1.00 0.94 T 0.13 0.00 0.06 0000 --- --- --- --- 005819 00000 ------------ G 0.61 0.98 0.78 A 0.39 0.02 0.22 0000 --- --- --- --- 005830 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 006367 00000 ------------ T 0.57 0.98 0.78 A 0.43 0.02 0.22 0000 --- --- --- --- 006398 00000 ------------ - 0.11 0.00 0.05 + 0.89 1.00 0.95 0000 --- --- --- --- 006975 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007148 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 007628 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 007901 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 008022 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009447 00000 ------------ T 0.71 0.98 0.84 C 0.29 0.02 0.16 0000 --- --- --- --- 009454 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009939 00000 ------------ T 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 010327 00000 ------------ T 0.41 0.98 0.70 C 0.59 0.02 0.30 0000 --- --- --- --- 010360 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010434 00000 ------------ G 0.54 0.98 0.76 A 0.46 0.02 0.24 0000 --- --- --- --- 010473 00000 ------------ C 0.78 0.98 0.88 T 0.22 0.02 0.12 0000 --- --- --- --- 011648 00000 ------------ - 0.11 0.00 0.05 + 0.89 1.00 0.95 0000 --- --- --- --- 011738 00000 ------------ A 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 011985 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 012146 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 012199 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 012504 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 012542 00000 ------------ A 0.68 0.98 0.83 G 0.32 0.02 0.17 0000 --- --- --- --- 012709 00000 ------------ A 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 012893 00000 ------------ C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 012996 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013314 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013317 00000 ------------ C 0.29 0.73 0.50 T 0.71 0.27 0.50 0000 --- --- --- --- 013684 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013738 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013755 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013884 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 013913 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013960 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 014176 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015035 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 015118 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015430 00000 ------------ - 0.17 0.32 0.24 + 0.83 0.68 0.76 0000 --- --- --- --- 015461 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 015749 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016143 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 016189 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 016242 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 016329 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016532 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016633 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016723 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017069 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 017334 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017452 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017699 00000 ------------ T 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 017954 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 018105 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 018190 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 018193 00000 ------------ C 0.67 1.00 0.81 T 0.33 0.00 0.19 0000 --- --- --- --- 018377 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018563 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 018874 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 019037 00000 ------------ C 0.29 0.73 0.50 T 0.71 0.27 0.50 0000 --- --- --- --- 019199 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 019326 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019567 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019810 00481 SYNON C 0.89 1.00 0.94 T 0.11 0.00 0.06 0094 ACC ACT THR(T) THR(T) 020222 00000 ------------ T 0.88 0.71 0.78 C 0.12 0.29 0.22 0000 --- --- --- --- 020227 00000 ------------ T 0.87 0.68 0.76 C 0.13 0.32 0.24 0000 --- --- --- --- 020306 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020477 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 020940 00000 ------------ A 0.31 0.74 0.55 G 0.69 0.26 0.45 0000 --- --- --- --- 020963 00000 ------------ A 0.81 1.00 0.91 C 0.19 0.00 0.09 0000 --- --- --- --- 021156 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021169 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021330 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 021502 00000 ------------ G 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021504 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 021587 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021689 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 021766 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 021797 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 021918 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 022475 00000 ------------ T 0.65 1.00 0.82 C 0.35 0.00 0.18 0000 --- --- --- --- 023099 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023135 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 023505 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 023647 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023689 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 024062 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 024743 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 024966 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 025077 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 025211 00000 ------------ G 0.80 0.97 0.88 A 0.20 0.03 0.12 0000 --- --- --- --- 025363 00000 ------------ G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 026320 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 026576 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026691 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026725 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026936 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 027403 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 027779 00000 ------------ G 0.92 1.00 0.95 A 0.08 0.00 0.05 0000 --- --- --- --- 027798 00000 ------------ C 0.97 1.00 0.98 T 0.03 0.00 0.02 0000 --- --- --- --- 027969 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 028054 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 028395 00000 ------------ G 0.70 1.00 0.86 A 0.30 0.00 0.14 0000 --- --- --- --- 028717 00000 ------------ T 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 029163 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 029366 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 029585 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 030104 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 030252 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030451 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030542 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 030555 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030799 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 030895 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031002 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 031062 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 031208 00000 ------------ T 0.70 1.00 0.85 C 0.30 0.00 0.15 0000 --- --- --- --- 031248 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 031322 00902 SYNON A 0.91 1.00 0.96 C 0.09 0.00 0.04 0235 AGA CGA ARG(R) ARG(R) 031408 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031648 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 031725 00000 ------------ T 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 032479 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032744 01002 NON-SYN C 0.90 1.00 0.94 T 0.10 0.00 0.06 0268 ACG ATG THR(T) MET(M) 033291 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 033328 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 033379 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033617 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 033630 00000 ------------ T 0.75 1.00 0.88 G 0.25 0.00 0.12 0000 --- --- --- --- 034036 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 034426 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 034434 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 034589 00000 ------------ T 0.71 1.00 0.85 C 0.29 0.00 0.15 0000 --- --- --- --- 034607 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 034608 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 035725 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 035730* 036245 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 036262 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 036859 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 036870 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 037085 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 037093 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 037311 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 037319 00000 ------------ A 0.89 0.97 0.93 G 0.11 0.03 0.07 0000 --- --- --- --- 037825 00000 ------------ G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 038154* 038473 01330 3' UTR A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 038582 01439 3' UTR C 0.76 0.98 0.88 T 0.24 0.02 0.12 0000 --- --- --- --- 038612 01469 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038742 01599 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 039263 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001909: A 004405: T 005427: CAAAATAATTGTGGTAGGAT 006398: TCT 011648: CTTTGTAGACT 012146: A 012504: A 015430: ATTA 031002: TCT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 035730 A 0.69 1.00 0.84 G 0.29 0.00 0.15 T 0.02 0.00 0.01 038154 A 0.65 0.96 0.80 G 0.33 0.00 0.16 T 0.02 0.04 0.03 Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000638 00000 ------------ C 0.50 0.68 0.59 T 0.50 0.32 0.41 0000 --- --- --- --- 002202 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002288 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003425 00000 ------------ G 0.85 0.68 0.77 A 0.15 0.32 0.23 0000 --- --- --- --- 003572 00000 ------------ G 0.77 0.64 0.71 C 0.23 0.36 0.29 0000 --- --- --- --- 003583 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003714 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004175 00422 NON-SYN G 0.90 1.00 0.95 T 0.10 0.00 0.05 0108 GGA GTA GLY(G) VAL(V) 004202 00449 NON-SYN C 0.92 1.00 0.96 T 0.08 0.00 0.04 0117 ACC ATC THR(T) ILE(I) 004230 00477 SYNON T 0.75 0.70 0.73 C 0.25 0.30 0.27 0126 TAT TAC TYR(Y) TYR(Y) 004257 00504 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0135 GAC GAA ASP(D) GLU(E) 004418 00665 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0189 ACG ATG THR(T) MET(M) 004476 00723 SYNON C 0.78 0.68 0.73 T 0.22 0.32 0.27 0208 CTC CTT LEU(L) LEU(L) 004645 00892 NON-SYN G 0.75 0.68 0.72 A 0.25 0.32 0.28 0265 GAC AAC ASP(D) ASN(N) 007061 00000 ------------ C 0.85 0.70 0.78 T 0.15 0.30 0.22 0000 --- --- --- --- 007279 00000 ------------ T 0.56 0.68 0.62 C 0.44 0.32 0.38 0000 --- --- --- --- 007370 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007388 00000 ------------ T 0.77 0.67 0.72 C 0.23 0.33 0.28 0000 --- --- --- --- 007476 00000 ------------ A 0.77 0.67 0.72 G 0.23 0.33 0.28 0000 --- --- --- --- 007484 00000 ------------ T 1.00 0.85 0.93 C 0.00 0.15 0.07 0000 --- --- --- --- 007497 00000 ------------ C 0.77 0.70 0.73 T 0.23 0.30 0.27 0000 --- --- --- --- 007960 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012879 00000 ------------ C 0.85 0.66 0.76 T 0.15 0.34 0.24 0000 --- --- --- --- 013134 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 015732 00997 NON-SYN C 0.91 0.83 0.87 G 0.09 0.17 0.13 0300 CTC GTC LEU(L) VAL(V) 016417 00000 ------------ C 0.98 0.85 0.91 T 0.02 0.15 0.09 0000 --- --- --- --- 016520 00000 ------------ - 0.40 0.50 0.45 + 0.60 0.50 0.55 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 016520: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000361 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000489 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000523 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000823 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001131 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001158 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001338 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001525 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001549 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001726 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 001962 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002006 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002077 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 002460 00000 ------------ C 0.94 0.94 0.94 T 0.06 0.06 0.06 0000 --- --- --- --- 002500 00000 ------------ A 0.67 1.00 0.84 C 0.33 0.00 0.16 0000 --- --- --- --- 002565 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002674 00000 ------------ A 0.22 0.82 0.53 G 0.78 0.18 0.47 0000 --- --- --- --- 002873 00000 ------------ C 0.97 0.94 0.96 T 0.03 0.06 0.04 0000 --- --- --- --- 003003 00054 5' UTR G 0.95 0.96 0.95 A 0.05 0.04 0.05 0000 --- --- --- --- 003369 00000 ------------ C 0.64 1.00 0.80 T 0.36 0.00 0.20 0000 --- --- --- --- 003450 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003675 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003775 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 003822 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003916 00000 ------------ T 0.86 0.79 0.83 C 0.14 0.21 0.17 0000 --- --- --- --- 004010 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004061 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004272 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 004405 00000 ------------ G 0.70 0.98 0.84 A 0.30 0.02 0.16 0000 --- --- --- --- 004447 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004506 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004554 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 004750 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 004753 00000 ------------ T 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 004972 00000 ------------ C 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 005003 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005030 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005046 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005378 00000 ------------ G 0.73 0.26 0.50 A 0.27 0.74 0.50 0000 --- --- --- --- 005581 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006079 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006551 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 006565 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 006761 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 007038 00000 ------------ - 0.55 1.00 0.77 + 0.45 0.00 0.23 0000 --- --- --- --- 007119 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007164 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007314 00000 ------------ T 0.95 0.97 0.96 C 0.05 0.03 0.04 0000 --- --- --- --- 007429 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007873 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008265 00000 ------------ C 0.55 1.00 0.77 T 0.45 0.00 0.23 0000 --- --- --- --- 008337 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008447 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008482 00000 ------------ A 0.55 1.00 0.76 G 0.45 0.00 0.24 0000 --- --- --- --- 009023 00407 5' UTR G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009118 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 009218 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 009234 00000 ------------ - 0.47 0.00 0.24 + 0.53 1.00 0.76 0000 --- --- --- --- 009291 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 009533 00000 ------------ C 0.53 1.00 0.78 A 0.47 0.00 0.22 0000 --- --- --- --- 009968 00522 5' UTR C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010182 00000 ------------ A 0.97 0.98 0.97 G 0.03 0.02 0.03 0000 --- --- --- --- 010304 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 010317 00000 ------------ C 0.84 1.00 0.93 A 0.16 0.00 0.07 0000 --- --- --- --- 010789 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 010833 00000 ------------ G 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 010866 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010914 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010924 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 011423 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 011509 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011809 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 011987 01045 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0084 GGG GGA GLY(G) GLY(G) 012054 01112 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0107 GGC AGC GLY(G) SER(S) 012143 01201 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0136 CGC CGT ARG(R) ARG(R) 012185 01243 SYNON C 0.94 1.00 0.97 A 0.06 0.00 0.03 0150 CCC CCA PRO(P) PRO(P) 012535 01593 NON-SYN C 0.97 1.00 0.99 G 0.03 0.00 0.01 0267 CCC CGC PRO(P) ARG(R) 012666 00000 ------------ G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 012868 00000 ------------ T 0.41 0.98 0.69 C 0.59 0.02 0.31 0000 --- --- --- --- 012980 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 013385 01718 NON-SYN T 0.93 1.00 0.96 G 0.07 0.00 0.04 0309 TCT GCT SER(S) ALA(A) 013432 01765 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0324 CAC CAT HIS(H) HIS(H) 013676 00000 ------------ C 0.79 1.00 0.90 G 0.21 0.00 0.10 0000 --- --- --- --- 013687 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 014242 00000 ------------ C 0.95 0.98 0.96 T 0.05 0.02 0.04 0000 --- --- --- --- 014289 00000 ------------ C 0.87 1.00 0.94 T 0.13 0.00 0.06 0000 --- --- --- --- 014404 02244 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0484 CGG CAG ARG(R) GLN(Q) 014649 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 014986 00000 ------------ G 0.56 0.98 0.77 A 0.44 0.02 0.23 0000 --- --- --- --- 015403 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 015517 02518 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0575 CCG CCA PRO(P) PRO(P) 015779 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 015797 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015852 00000 ------------ G 0.97 0.98 0.98 A 0.03 0.02 0.02 0000 --- --- --- --- 015854 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 015875 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015908 02635 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0614 ACG ACA THR(T) THR(T) 016295 00000 ------------ G 0.79 0.40 0.59 C 0.21 0.60 0.41 0000 --- --- --- --- 016503 02908 SYNON C 0.87 1.00 0.94 T 0.13 0.00 0.06 0705 GCC GCT ALA(A) ALA(A) 016609 03014 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 0741 CTG TTG LEU(L) LEU(L) 016733 00000 ------------ G 0.61 0.98 0.79 A 0.39 0.02 0.21 0000 --- --- --- --- 016773 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 016777 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016793 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016794 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 016817 00000 ------------ - 0.45 0.98 0.72 + 0.55 0.02 0.28 0000 --- --- --- --- 017050 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 017360 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 018076 00000 ------------ A 0.46 0.98 0.72 G 0.54 0.02 0.28 0000 --- --- --- --- 018652 00000 ------------ G 0.86 0.98 0.92 A 0.14 0.02 0.08 0000 --- --- --- --- 018907 03930 3' UTR - 0.29 0.02 0.15 + 0.71 0.98 0.85 0000 --- --- --- --- 018981 04004 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019012 00000 ------------ A 0.48 0.98 0.73 G 0.52 0.02 0.27 0000 --- --- --- --- 019068 00000 ------------ T 0.70 0.98 0.84 C 0.30 0.02 0.16 0000 --- --- --- --- 019497 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001726: TACT 002077: AACCC 007038: CCTTT 009234: CCTATAGTTT 013687: TTCC 016777: TC 016817: CT 017050: TGGGGACACAGCCT 018907: C 019497: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000463 00000 ------------ A 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 000696 00000 ------------ T 0.74 0.80 0.77 C 0.26 0.20 0.23 0000 --- --- --- --- 001427 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 001431 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 001720 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001891 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 002145 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002505 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 002582 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 002714 00000 ------------ - 0.00 0.14 0.07 + 1.00 0.86 0.93 0000 --- --- --- --- 003346 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 004307 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005098 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 005400 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 005725 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006477 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006777 00165 5' UTR G 0.50 0.83 0.66 A 0.50 0.17 0.34 0000 --- --- --- --- 006789 00177 NON-SYN C 0.89 1.00 0.95 T 0.11 0.00 0.05 0004 GCG GTG ALA(A) VAL(V) 006832 00220 SYNON C 0.96 0.89 0.92 T 0.04 0.11 0.08 0018 CTC CTT LEU(L) LEU(L) 006854 00242 NON-SYN C 1.00 0.83 0.91 T 0.00 0.17 0.09 0026 CAT TAT HIS(H) TYR(Y) 007013 00000 ------------ G 0.70 0.57 0.63 T 0.30 0.43 0.37 0000 --- --- --- --- 007231 00385 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0073 CGC CGT ARG(R) ARG(R) 007741 00000 ------------ T 1.00 0.79 0.90 G 0.00 0.21 0.10 0000 --- --- --- --- 008237 00000 ------------ A 0.81 0.84 0.83 T 0.19 0.16 0.17 0000 --- --- --- --- 008324 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008438 00000 ------------ T 0.90 0.87 0.88 C 0.10 0.13 0.12 0000 --- --- --- --- 008607 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008726 00000 ------------ T 0.62 0.50 0.56 C 0.38 0.50 0.44 0000 --- --- --- --- 008735 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008790 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 008853 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008937 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 009022 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009119 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009313 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009467 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 009497 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 009530 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 010494 00000 ------------ C 0.56 0.70 0.63 T 0.44 0.30 0.37 0000 --- --- --- --- 010612 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 010912 00000 ------------ T 0.82 0.93 0.88 C 0.18 0.07 0.12 0000 --- --- --- --- 011245 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011252 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011322 00000 ------------ C 0.57 0.78 0.67 T 0.43 0.22 0.33 0000 --- --- --- --- 011540 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011580 00000 ------------ G 0.79 0.83 0.81 C 0.21 0.17 0.19 0000 --- --- --- --- 011584 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011681 00000 ------------ - 0.46 0.61 0.53 + 0.54 0.39 0.47 0000 --- --- --- --- 012113 00000 ------------ G 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 012152 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 012706 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012834 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 012908 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013050 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013174 00000 ------------ A 0.93 0.82 0.88 T 0.07 0.18 0.12 0000 --- --- --- --- 013630 00000 ------------ C 0.70 0.59 0.64 G 0.30 0.41 0.36 0000 --- --- --- --- 013775 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014024 00000 ------------ G 0.96 0.85 0.90 C 0.04 0.15 0.10 0000 --- --- --- --- 014074 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014195 00000 ------------ G 0.87 0.79 0.83 A 0.13 0.21 0.17 0000 --- --- --- --- 014239 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 014632 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014700 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 014733 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 014746 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 014833 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 014895 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 014936 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015027 00000 ------------ C 0.93 0.87 0.90 A 0.07 0.13 0.10 0000 --- --- --- --- 015284 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015300 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015580 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015660 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015679 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015805 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016069 00000 ------------ - 0.04 0.20 0.12 + 0.96 0.80 0.88 0000 --- --- --- --- 016412 00000 ------------ G 0.85 0.77 0.82 A 0.15 0.23 0.18 0000 --- --- --- --- 016787 00000 ------------ G 0.86 0.82 0.84 A 0.14 0.18 0.16 0000 --- --- --- --- 017159 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017681 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017839 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018291 00000 ------------ G 0.80 0.78 0.79 A 0.20 0.22 0.21 0000 --- --- --- --- 018483 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 018813 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 018909 00941 NON-SYN T 0.96 1.00 0.98 C 0.04 0.00 0.02 0259 TGT CGT CYS(C) ARG(R) 018922 00954 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0263 GGA GAA GLY(G) GLU(E) 019022 01054 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0296 GAG GAA GLU(E) GLU(E) 019826 01858 3' UTR A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 019868 01900 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019890 01922 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020026 02058 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020043 02075 3' UTR - 0.42 0.35 0.38 + 0.58 0.65 0.62 0000 --- --- --- --- 020208 02239 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020502 02533 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020625 02656 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020685 02716 3' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020849 02880 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020987 03018 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 021089 03120 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 021299 03330 3' UTR A 0.93 0.85 0.89 G 0.07 0.15 0.11 0000 --- --- --- --- 021443 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021639 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 021642 00000 ------------ T 0.85 0.76 0.81 C 0.15 0.24 0.19 0000 --- --- --- --- 021707 00000 ------------ T 0.85 0.75 0.80 G 0.15 0.25 0.20 0000 --- --- --- --- 021757 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021825 00000 ------------ A 0.92 0.86 0.89 G 0.08 0.14 0.11 0000 --- --- --- --- 022223 00000 ------------ A 0.90 0.88 0.89 G 0.10 0.12 0.11 0000 --- --- --- --- 022225 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022254 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 022454 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022586 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 022818 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022827 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 023168 00000 ------------ G 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001427: ATTGT 001891: AG 002505: AT 002714: T 010612: C 011681: CC 012152: C 016069: AACA 020043: T 021639: ATATA 022254: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000152 00000 ------------ G 1.00 0.90 0.96 C 0.00 0.10 0.04 0000 --- --- --- --- 000167 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000370 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000577 00000 ------------ C 0.90 0.43 0.67 T 0.10 0.57 0.33 0000 --- --- --- --- 000671 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000713 00000 ------------ T 0.81 0.96 0.88 C 0.19 0.04 0.12 0000 --- --- --- --- 000851 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000866 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000880 00000 ------------ G 1.00 0.90 0.95 C 0.00 0.10 0.05 0000 --- --- --- --- 001116 00000 ------------ - 0.80 0.77 0.79 + 0.20 0.23 0.21 0000 --- --- --- --- 001169 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001319 00000 ------------ - 0.73 0.41 0.57 + 0.27 0.59 0.43 0000 --- --- --- --- 001449 00000 ------------ T 0.62 0.41 0.52 C 0.38 0.59 0.48 0000 --- --- --- --- 001451 00000 ------------ C 0.88 0.46 0.67 A 0.12 0.54 0.33 0000 --- --- --- --- 001612 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001632 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001731 -----** SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0020 CTC CTT LEU(L) LEU(L) 002011 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 002456 00000 ------------ C 0.94 1.00 0.96 A 0.06 0.00 0.04 0000 --- --- --- --- 002527 00000 ------------ T 0.83 1.00 0.88 C 0.17 0.00 0.12 0000 --- --- --- --- 002757 00000 ------------ C 0.95 1.00 0.96 G 0.05 0.00 0.04 0000 --- --- --- --- 003715 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 003740 00000 ------------ A 0.54 0.67 0.61 G 0.46 0.33 0.39 0000 --- --- --- --- 003977 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 004100 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 004544 00000 ------------ T 0.70 0.95 0.81 C 0.30 0.05 0.19 0000 --- --- --- --- 005128 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005300 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 005413 00000 ------------ T 0.85 0.89 0.87 C 0.15 0.11 0.13 0000 --- --- --- --- 005521 00000 ------------ G 0.96 0.81 0.89 A 0.04 0.19 0.11 0000 --- --- --- --- 005997 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 006098 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 006110 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 006445 00000 ------------ A 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 006638 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 007437 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007742 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007884 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007885 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008095 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008493 00000 ------------ C 0.73 0.74 0.73 T 0.27 0.26 0.27 0000 --- --- --- --- 008518 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008724 00000 ------------ T 0.89 0.89 0.89 G 0.11 0.11 0.11 0000 --- --- --- --- 008910 00000 ------------ G 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 008946 00000 ------------ C 0.54 0.59 0.56 G 0.46 0.41 0.44 0000 --- --- --- --- 009043 00000 ------------ A 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 009091 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 009147 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 009223 00000 ------------ A 0.88 0.89 0.88 G 0.12 0.11 0.12 0000 --- --- --- --- 009501 00000 ------------ G 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 009608 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009709 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010628 00000 ------------ C 0.93 0.93 0.93 A 0.07 0.07 0.07 0000 --- --- --- --- 010709 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011176 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011450 00000 ------------ G 0.63 0.88 0.74 C 0.37 0.12 0.26 0000 --- --- --- --- 011468 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011631 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011962 00000 ------------ A 0.57 0.76 0.66 G 0.43 0.24 0.34 0000 --- --- --- --- 012324 00000 ------------ A 0.62 0.76 0.68 G 0.38 0.24 0.32 0000 --- --- --- --- 013457 00000 ------------ A 0.65 0.77 0.71 G 0.35 0.23 0.29 0000 --- --- --- --- 013732 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 013785 00000 ------------ C 0.90 0.90 0.90 T 0.10 0.10 0.10 0000 --- --- --- --- 014036 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014772 00000 ------------ C 0.48 0.55 0.51 T 0.52 0.45 0.49 0000 --- --- --- --- 014881 00000 ------------ C 0.67 0.80 0.73 T 0.33 0.20 0.27 0000 --- --- --- --- 015123 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015848 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016047 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 016673 00000 ------------ A 0.47 0.54 0.51 T 0.53 0.46 0.49 0000 --- --- --- --- 016711 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016893 00000 ------------ G 0.73 0.57 0.64 C 0.27 0.43 0.36 0000 --- --- --- --- 016970 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 017257 00000 ------------ C 0.68 0.75 0.71 T 0.33 0.25 0.29 0000 --- --- --- --- 017396 00000 ------------ A 0.63 0.68 0.65 C 0.37 0.33 0.35 0000 --- --- --- --- 018086 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018133 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018352 00000 ------------ G 0.88 0.91 0.90 A 0.12 0.09 0.10 0000 --- --- --- --- 019072 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 019819 -----** NON-SYN G 0.98 0.95 0.97 A 0.02 0.05 0.03 0152 GCC ACC ALA(A) THR(T) 020155 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 020174 00000 ------------ C 0.66 0.77 0.72 T 0.34 0.23 0.28 0000 --- --- --- --- 020477 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 020641 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 021849 00000 ------------ G 0.81 0.91 0.86 A 0.19 0.09 0.14 0000 --- --- --- --- 022067 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022158 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022192 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022476 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 022501 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022607 00000 ------------ T 0.90 0.98 0.93 A 0.10 0.02 0.07 0000 --- --- --- --- 022739 -----** NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0192 GGG AGG GLY(G) ARG(R) 023104 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 023305 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 023345 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023665 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023676 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023781 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 023841 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023890 00000 ------------ G 0.83 0.82 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 024331 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024465 00000 ------------ G 0.71 0.50 0.61 A 0.29 0.50 0.39 0000 --- --- --- --- 024504 00000 ------------ C 0.97 0.97 0.97 T 0.03 0.03 0.03 0000 --- --- --- --- 024536 00000 ------------ G 0.78 1.00 0.89 A 0.22 0.00 0.11 0000 --- --- --- --- 025262 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 025549 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025694 00000 ------------ G 0.50 0.85 0.67 A 0.50 0.15 0.33 0000 --- --- --- --- 025763 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 026110 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026242 -----** SYNON T 0.50 0.88 0.68 C 0.50 0.12 0.32 0264 ACT ACC THR(T) THR(T) 026348 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 026405 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 026547 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026578 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027633 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028696 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 029136 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001116: C 001319: TGTGAT 006638: AAAG 008095: GA 015123: A 019072: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000198 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 000386 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000461 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000497 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000688 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000696 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000721 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000764 00000 ------------ A 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 001428 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001490 00000 ------------ A 0.94 0.65 0.80 G 0.06 0.35 0.20 0000 --- --- --- --- 001491 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 001522 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001580 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 001735 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 001751 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 001909 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001927 00000 ------------ - 0.03 0.30 0.19 + 0.97 0.70 0.81 0000 --- --- --- --- 001938 00000 ------------ A 0.93 0.72 0.82 C 0.07 0.28 0.18 0000 --- --- --- --- 002047 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 002262 00000 ------------ C 1.00 0.87 0.93 T 0.00 0.13 0.07 0000 --- --- --- --- 002388 00000 ------------ G 0.52 0.80 0.66 T 0.48 0.20 0.34 0000 --- --- --- --- 002518 00000 ------------ C 0.57 0.80 0.68 G 0.43 0.20 0.32 0000 --- --- --- --- 002780 00120 5' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002952 00000 ------------ G 0.75 0.67 0.71 A 0.25 0.33 0.29 0000 --- --- --- --- 003213 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 003428 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003450 00000 ------------ T 0.96 0.74 0.85 C 0.04 0.26 0.15 0000 --- --- --- --- 003483 00000 ------------ T 0.94 0.63 0.79 G 0.06 0.37 0.21 0000 --- --- --- --- 003532 00000 ------------ - 0.10 0.13 0.12 + 0.90 0.87 0.88 0000 --- --- --- --- 003543 00000 ------------ C 0.67 0.57 0.62 A 0.33 0.43 0.38 0000 --- --- --- --- 004138 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004197 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 004333 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 004376 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 004685 00000 ------------ A 0.65 0.57 0.61 T 0.35 0.43 0.39 0000 --- --- --- --- 004686 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004717 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 004925 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004937 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005090 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005096 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005131 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005785 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005798 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 006012 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006039 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006117 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006201 00000 ------------ A 0.94 0.70 0.82 G 0.06 0.30 0.18 0000 --- --- --- --- 006266 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 006515 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 006675 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006703 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 006783 00000 ------------ G 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 007178 00000 ------------ A 0.73 0.55 0.64 G 0.27 0.45 0.36 0000 --- --- --- --- 007393 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007675 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 007872 00000 ------------ C 0.62 0.59 0.61 T 0.38 0.41 0.39 0000 --- --- --- --- 008069 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 008699 00000 ------------ T 0.90 0.87 0.88 A 0.10 0.13 0.12 0000 --- --- --- --- 008706 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008720 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009249 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 010076 00000 ------------ C 0.76 0.72 0.74 T 0.24 0.28 0.26 0000 --- --- --- --- 010350 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 010541 00000 ------------ C 0.81 1.00 0.92 T 0.19 0.00 0.08 0000 --- --- --- --- 010942 00000 ------------ A 0.88 0.87 0.87 T 0.12 0.13 0.13 0000 --- --- --- --- 011001 00000 ------------ T 0.84 0.98 0.91 C 0.16 0.02 0.09 0000 --- --- --- --- 011187 00000 ------------ T 0.85 0.98 0.91 C 0.15 0.02 0.09 0000 --- --- --- --- 011233* 011598 00000 ------------ A 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 011809 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 011901 00000 ------------ G 0.66 0.43 0.54 A 0.34 0.57 0.46 0000 --- --- --- --- 011971 00000 ------------ C 0.98 0.76 0.87 T 0.02 0.24 0.13 0000 --- --- --- --- 012151 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 012244 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 012552 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 013334 00000 ------------ A 0.97 0.93 0.94 T 0.03 0.07 0.06 0000 --- --- --- --- 013385 00000 ------------ C 0.63 0.45 0.53 T 0.37 0.55 0.47 0000 --- --- --- --- 014205 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014396 00000 ------------ T 0.94 0.53 0.77 C 0.06 0.47 0.23 0000 --- --- --- --- 014501 00000 ------------ C 0.85 1.00 0.91 A 0.15 0.00 0.09 0000 --- --- --- --- 014888 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 015151 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015279 00000 ------------ A 0.88 0.80 0.84 G 0.12 0.20 0.16 0000 --- --- --- --- 015895 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016234 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 016392 00000 ------------ A 0.42 0.72 0.56 G 0.58 0.28 0.44 0000 --- --- --- --- 016602 00974 SYNON A 0.83 0.91 0.88 G 0.17 0.09 0.12 0267 ACA ACG THR(T) THR(T) 016918 01189 NON-SYN G 0.93 1.00 0.97 T 0.07 0.00 0.03 0339 TGC TTC CYS(C) PHE(F) 017515 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 017645 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 017794 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018184 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 018290 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018367 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 018490 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 019109 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019400 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019404 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019642 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020157 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020276 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020327 00000 ------------ G 0.94 0.87 0.90 A 0.06 0.13 0.10 0000 --- --- --- --- 020392 00000 ------------ C 0.77 0.80 0.79 G 0.23 0.20 0.21 0000 --- --- --- --- 020423 00000 ------------ A 0.79 0.80 0.80 G 0.21 0.20 0.20 0000 --- --- --- --- 020691 01364 SYNON T 0.83 0.91 0.87 C 0.17 0.09 0.13 0397 GGT GGC GLY(G) GLY(G) 021102 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021319 00000 ------------ C 0.94 0.86 0.90 T 0.06 0.14 0.10 0000 --- --- --- --- 021570 00000 ------------ G 0.42 0.72 0.56 A 0.58 0.28 0.44 0000 --- --- --- --- 021639 00000 ------------ C 0.77 0.63 0.70 A 0.23 0.37 0.30 0000 --- --- --- --- 021647 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 021708 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022173 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 022454 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022744 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 022771 00000 ------------ C 0.75 0.63 0.69 T 0.25 0.37 0.31 0000 --- --- --- --- 022925 00000 ------------ G 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 024250 01772 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0533 CAG CAA GLN(Q) GLN(Q) 024358 01880 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0569 GAC GAT ASP(D) ASP(D) 024453 00000 ------------ - 0.88 1.00 0.94 + 0.12 0.00 0.06 0000 --- --- --- --- 024616 00000 ------------ G 0.45 0.69 0.57 A 0.55 0.31 0.43 0000 --- --- --- --- 024618 00000 ------------ G 0.71 0.79 0.75 A 0.29 0.21 0.25 0000 --- --- --- --- 024660 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024950 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 025093 01985 SYNON G 0.88 1.00 0.94 T 0.12 0.00 0.06 0604 CGG CGT ARG(R) ARG(R) 025245 02137 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025424 00000 ------------ A 0.81 0.81 0.81 G 0.19 0.19 0.19 0000 --- --- --- --- 025455 00000 ------------ G 0.50 0.71 0.61 C 0.50 0.29 0.39 0000 --- --- --- --- 025481 00000 ------------ G 0.83 1.00 0.92 A 0.17 0.00 0.08 0000 --- --- --- --- 025638 00000 ------------ A 0.43 0.72 0.58 T 0.57 0.28 0.42 0000 --- --- --- --- 026011 00000 ------------ G 0.84 0.91 0.88 A 0.16 0.09 0.12 0000 --- --- --- --- 026044 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 026260 00000 ------------ C 0.50 0.73 0.62 T 0.50 0.27 0.38 0000 --- --- --- --- 026380 00000 ------------ C 0.50 0.73 0.62 T 0.50 0.27 0.38 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001927: TAGTCCCAGCT 002047: AAAG 003213: CA 003428: AGGAGGG 003532: TA 011233: AAA 024453: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 011233 - 0.00 0.02 0.01 A 0.04 0.00 0.02 AAA 0.96 0.98 0.97 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000101 00000 ------------ - 0.02 0.11 0.07 + 0.98 0.89 0.93 0000 --- --- --- --- 000304 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 000366 00000 ------------ T 0.86 1.00 0.92 G 0.14 0.00 0.08 0000 --- --- --- --- 000580 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 000612 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000616 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000636 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000640 00000 ------------ A 0.98 0.78 0.88 G 0.02 0.22 0.12 0000 --- --- --- --- 000654 00000 ------------ C 0.95 0.85 0.90 T 0.05 0.15 0.10 0000 --- --- --- --- 000658 00000 ------------ G 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 000668 00000 ------------ A 0.95 0.85 0.90 C 0.05 0.15 0.10 0000 --- --- --- --- 000754 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 000918 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001098 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001174 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001310 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001627 00046 5' UTR C 0.48 0.80 0.63 T 0.52 0.20 0.37 0000 --- --- --- --- 001733 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001736 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001857 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 001875 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002235 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003001 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 003458 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 003477 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003814 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004690 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004707 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004714 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004744 00000 ------------ C 0.83 0.30 0.57 T 0.17 0.70 0.43 0000 --- --- --- --- 004797 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 004800 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 004803 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004842 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 004853 00000 ------------ T 0.67 0.78 0.72 C 0.33 0.22 0.28 0000 --- --- --- --- 004856 00000 ------------ A 0.67 0.76 0.71 G 0.33 0.24 0.29 0000 --- --- --- --- 004873 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004903 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004941 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 004952 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006179 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006333 00668 NON-SYN C 0.95 1.00 0.98 G 0.05 0.00 0.02 0207 CCC GCC PRO(P) ALA(A) 006570 00760 SYNON C 1.00 0.88 0.93 T 0.00 0.12 0.07 0237 CCC CCT PRO(P) PRO(P) 007040 00000 ------------ C 0.35 0.78 0.56 T 0.65 0.22 0.44 0000 --- --- --- --- 007532 00000 ------------ T 0.30 0.80 0.65 C 0.70 0.20 0.35 0000 --- --- --- --- 007589 01348 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0433 AAC AAT ASN(N) ASN(N) 007708 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008562 01683 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0545 GGC GAC GLY(G) ASP(D) 008831 01862 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0605 TAC CAC TYR(Y) HIS(H) 009259 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010344 00000 ------------ G 0.79 0.21 0.52 C 0.21 0.79 0.48 0000 --- --- --- --- 010406 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010451 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010513 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000101: AT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000253 00000 ------------ C 0.59 0.83 0.70 A 0.41 0.17 0.30 0000 --- --- --- --- 000309 00000 ------------ G 0.38 0.72 0.54 C 0.62 0.28 0.46 0000 --- --- --- --- 000959 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001162 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001423 00000 ------------ C 0.50 0.72 0.61 T 0.50 0.28 0.39 0000 --- --- --- --- 001985 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002028 00000 ------------ G 0.86 0.91 0.89 A 0.14 0.09 0.11 0000 --- --- --- --- 002045 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002322 00069 5' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002348 00000 ------------ C 0.90 0.87 0.88 A 0.10 0.13 0.12 0000 --- --- --- --- 002776 00000 ------------ G 0.56 0.68 0.62 A 0.44 0.32 0.38 0000 --- --- --- --- 002920 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002951 00000 ------------ G 0.90 0.98 0.93 A 0.10 0.02 0.07 0000 --- --- --- --- 003044 00000 ------------ G 0.94 0.95 0.95 C 0.06 0.05 0.05 0000 --- --- --- --- 003138 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 003139 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 003142 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 003159 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 003267 00000 ------------ G 0.73 0.81 0.77 T 0.27 0.19 0.23 0000 --- --- --- --- 003276 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003576 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003637 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 003793 00000 ------------ C 0.40 0.65 0.52 T 0.60 0.35 0.48 0000 --- --- --- --- 003813 00000 ------------ G 0.40 0.65 0.52 A 0.60 0.35 0.48 0000 --- --- --- --- 003824 00000 ------------ G 0.40 0.65 0.52 C 0.60 0.35 0.48 0000 --- --- --- --- 004377 00204 NON-SYN G 0.80 0.76 0.78 T 0.20 0.24 0.22 0035 GTG TTG VAL(V) LEU(L) 004392 00219 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0040 GTC ATC VAL(V) ILE(I) 004873 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 005006 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005046 00000 ------------ T 0.77 0.74 0.76 C 0.23 0.26 0.24 0000 --- --- --- --- 005099 00000 ------------ C 0.80 0.74 0.77 G 0.20 0.26 0.23 0000 --- --- --- --- 005212 00000 ------------ T 0.77 0.74 0.76 C 0.23 0.26 0.24 0000 --- --- --- --- 005225 00000 ------------ A 0.90 0.93 0.91 G 0.10 0.07 0.09 0000 --- --- --- --- 005228 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005230 00000 ------------ T 0.77 0.74 0.76 C 0.23 0.26 0.24 0000 --- --- --- --- 005299 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005434 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007038 00000 ------------ A 0.81 0.91 0.86 C 0.19 0.09 0.14 0000 --- --- --- --- 007043 00000 ------------ T 0.85 0.91 0.88 G 0.15 0.09 0.12 0000 --- --- --- --- 007161 00000 ------------ C 0.46 0.63 0.54 A 0.54 0.37 0.46 0000 --- --- --- --- 007172 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 007282 00000 ------------ G 0.65 0.46 0.55 C 0.35 0.54 0.45 0000 --- --- --- --- 007325 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007330 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007341 00000 ------------ T 0.94 0.85 0.89 C 0.06 0.15 0.11 0000 --- --- --- --- 007430 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 007494 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007498 00000 ------------ - 0.81 0.72 0.77 + 0.19 0.28 0.23 0000 --- --- --- --- 007945 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008280 00000 ------------ A 0.90 0.91 0.90 G 0.10 0.09 0.10 0000 --- --- --- --- 008342 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008444 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008530 00000 ------------ A 0.89 0.85 0.87 G 0.11 0.15 0.13 0000 --- --- --- --- 008591 00000 ------------ G 0.83 0.65 0.74 C 0.17 0.35 0.26 0000 --- --- --- --- 008801 00000 ------------ T 0.76 0.61 0.68 G 0.24 0.39 0.32 0000 --- --- --- --- 008810 00000 ------------ G 0.78 0.63 0.71 T 0.22 0.37 0.29 0000 --- --- --- --- 008922 00000 ------------ C 0.78 0.61 0.70 T 0.22 0.39 0.30 0000 --- --- --- --- 008936 00000 ------------ T 0.74 0.61 0.68 C 0.26 0.39 0.32 0000 --- --- --- --- 009075 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009265 00000 ------------ - 0.23 0.38 0.30 + 0.77 0.62 0.70 0000 --- --- --- --- 019879 00000 ------------ T 0.96 0.93 0.94 A 0.04 0.07 0.06 0000 --- --- --- --- 019931 00000 ------------ A 0.93 0.95 0.94 G 0.07 0.05 0.06 0000 --- --- --- --- 019966 00000 ------------ G 0.24 0.89 0.56 A 0.76 0.11 0.44 0000 --- --- --- --- 020138 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 020241 00000 ------------ - 0.23 0.89 0.55 + 0.77 0.11 0.45 0000 --- --- --- --- 020405 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030528 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 030551 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030599 00000 ------------ G 0.41 0.89 0.66 A 0.59 0.11 0.34 0000 --- --- --- --- 030684 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030748 00000 ------------ T 0.21 0.89 0.54 G 0.79 0.11 0.46 0000 --- --- --- --- 030949 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 031019 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 031053 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 031073 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 055875 00000 ------------ C 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 056039 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 056574 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 056626 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 056828 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 056848 00000 ------------ A 0.87 0.84 0.86 G 0.13 0.16 0.14 0000 --- --- --- --- 064995 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 071447 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 071603 00000 ------------ A 0.67 0.34 0.50 G 0.33 0.66 0.50 0000 --- --- --- --- 071629 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 071675 00000 ------------ C 0.52 0.70 0.62 T 0.48 0.30 0.38 0000 --- --- --- --- 071904 00000 ------------ - 0.79 0.91 0.85 + 0.21 0.09 0.15 0000 --- --- --- --- 072060 00715 NON-SYN A 1.00 0.96 0.98 T 0.00 0.04 0.02 0205 TAT TTT TYR(Y) PHE(F) 072205 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 072213 00000 ------------ C 0.61 0.72 0.66 T 0.39 0.28 0.34 0000 --- --- --- --- 072268 00000 ------------ A 0.72 0.76 0.74 T 0.28 0.24 0.26 0000 --- --- --- --- 072275 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 072342 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 072546 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 072588 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 072616 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 072679 00000 ------------ A 0.90 0.96 0.93 G 0.10 0.04 0.07 0000 --- --- --- --- 072896 00000 ------------ T 0.40 0.66 0.53 C 0.60 0.34 0.47 0000 --- --- --- --- 072897 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 072932 00000 ------------ G 0.39 0.66 0.52 A 0.61 0.34 0.48 0000 --- --- --- --- 072976 00000 ------------ T 0.41 0.66 0.53 C 0.59 0.34 0.47 0000 --- --- --- --- 072995 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 073069 00000 ------------ T 0.38 0.66 0.51 C 0.62 0.34 0.49 0000 --- --- --- --- 073073 00000 ------------ C 0.77 0.80 0.78 T 0.23 0.20 0.22 0000 --- --- --- --- 073266 00000 ------------ C 0.88 0.87 0.88 T 0.12 0.13 0.12 0000 --- --- --- --- 073295 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 073360 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 073478 00000 ------------ A 0.40 0.63 0.51 G 0.60 0.37 0.49 0000 --- --- --- --- 073535 00000 ------------ G 0.75 0.78 0.77 A 0.25 0.22 0.23 0000 --- --- --- --- 073560 00000 ------------ C 0.46 0.63 0.54 T 0.54 0.37 0.46 0000 --- --- --- --- 073880 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 073904 00000 ------------ G 0.92 0.59 0.76 A 0.08 0.41 0.24 0000 --- --- --- --- 073939 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 074113 00000 ------------ G 0.88 0.61 0.75 T 0.12 0.39 0.25 0000 --- --- --- --- 081399 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 081400 00000 ------------ G 0.80 0.57 0.68 A 0.20 0.43 0.32 0000 --- --- --- --- 081855 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 081899 00000 ------------ G 0.90 0.80 0.85 A 0.10 0.20 0.15 0000 --- --- --- --- 081919 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 098515 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 098543 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 098566 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 098573 00000 ------------ - 0.07 0.22 0.14 + 0.93 0.78 0.86 0000 --- --- --- --- 098590 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 098669 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 098704 00000 ------------ C 0.78 0.54 0.66 A 0.22 0.46 0.34 0000 --- --- --- --- 098759 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 098913 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 099198 00000 ------------ A 0.43 0.67 0.56 T 0.57 0.33 0.44 0000 --- --- --- --- 099257 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 099322 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 099549 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 099887 00000 ------------ G 0.79 0.74 0.77 T 0.21 0.26 0.23 0000 --- --- --- --- 099964 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 099985 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 100019 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 100034 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 100227 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 100306 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 100444 00000 ------------ A 0.82 0.57 0.70 G 0.18 0.42 0.30 0000 --- --- --- --- 100718 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 100800 01097 SYNON A 0.90 0.78 0.84 C 0.10 0.22 0.16 0332 CCA CCC PRO(P) PRO(P) 100933 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 101080 00000 ------------ A 0.89 0.78 0.83 T 0.11 0.22 0.17 0000 --- --- --- --- 101204 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 101252 00000 ------------ G 0.89 0.96 0.92 A 0.11 0.04 0.08 0000 --- --- --- --- 111535 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 111652 00000 ------------ C 0.83 0.95 0.89 T 0.17 0.05 0.11 0000 --- --- --- --- 111763 00000 ------------ T 0.82 0.86 0.84 C 0.18 0.14 0.16 0000 --- --- --- --- 111834 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 111951 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 111977 00000 ------------ G 0.81 0.74 0.78 T 0.19 0.26 0.22 0000 --- --- --- --- 112046 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 112088 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 112263 00000 ------------ C 0.98 0.85 0.91 T 0.02 0.15 0.09 0000 --- --- --- --- 124987 00000 ------------ T 0.88 0.95 0.91 C 0.12 0.05 0.09 0000 --- --- --- --- 125000 00000 ------------ - 0.12 0.43 0.28 + 0.88 0.57 0.72 0000 --- --- --- --- 125013 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 125116 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 125146 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 125391 00000 ------------ G 0.88 0.57 0.72 A 0.12 0.43 0.28 0000 --- --- --- --- 125772 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 126151 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 126580 00000 ------------ T 0.88 0.52 0.70 C 0.12 0.48 0.30 0000 --- --- --- --- 127042 00000 ------------ C 0.98 0.86 0.92 T 0.02 0.14 0.08 0000 --- --- --- --- 127043 00000 ------------ C 0.87 0.64 0.76 T 0.13 0.36 0.24 0000 --- --- --- --- 127258 00000 ------------ G 0.95 0.65 0.80 A 0.05 0.35 0.20 0000 --- --- --- --- 140519 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 140579 00000 ------------ G 0.67 0.72 0.70 A 0.33 0.28 0.30 0000 --- --- --- --- 140686 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 140923 01520 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0473 GAT GAC ASP(D) ASP(D) 141102 00000 ------------ G 0.79 0.86 0.82 A 0.21 0.14 0.18 0000 --- --- --- --- 141181 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 141416 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 141588 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 141658 00000 ------------ G 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 148010 00000 ------------ G 0.97 0.84 0.90 A 0.03 0.16 0.10 0000 --- --- --- --- 148318 01795 NON-SYN C 0.89 0.73 0.80 T 0.11 0.27 0.20 0565 CCG CTG PRO(P) LEU(L) 148328 01805 SYNON A 0.97 0.84 0.90 G 0.03 0.16 0.10 0568 GAA GAG GLU(E) GLU(E) 148537 00000 ------------ - 0.73 0.88 0.80 + 0.27 0.12 0.20 0000 --- --- --- --- 148606 00000 ------------ C 0.85 0.93 0.89 A 0.15 0.07 0.11 0000 --- --- --- --- 148609 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 148694 00000 ------------ A 0.85 0.75 0.80 G 0.15 0.25 0.20 0000 --- --- --- --- 148704 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 156228 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 156320 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 156325 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 156655 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 156748 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 164879 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 165013 00000 ------------ C 0.60 0.72 0.66 G 0.40 0.28 0.34 0000 --- --- --- --- 165038 00000 ------------ G 0.90 0.72 0.81 A 0.10 0.28 0.19 0000 --- --- --- --- 165160 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 165230 00000 ------------ C 0.60 0.75 0.67 T 0.40 0.25 0.33 0000 --- --- --- --- 165306 00000 ------------ C 0.83 0.73 0.78 A 0.17 0.27 0.22 0000 --- --- --- --- 165399 00000 ------------ T 0.57 0.55 0.56 C 0.43 0.45 0.44 0000 --- --- --- --- 170717 00000 ------------ T 0.84 0.70 0.77 A 0.16 0.30 0.23 0000 --- --- --- --- 170779 00000 ------------ G 0.93 0.80 0.87 T 0.07 0.20 0.13 0000 --- --- --- --- 170976 00000 ------------ G 0.83 0.72 0.77 C 0.17 0.28 0.23 0000 --- --- --- --- 171047 02052 NON-SYN G 0.96 0.91 0.93 A 0.04 0.09 0.07 0651 GTT ATT VAL(V) ILE(I) 171050 02055 NON-SYN G 0.83 0.72 0.77 C 0.17 0.28 0.23 0652 GAG CAG GLU(E) GLN(Q) 171180 00000 ------------ G 0.83 0.72 0.77 A 0.17 0.28 0.23 0000 --- --- --- --- 171235 00000 ------------ G 0.83 0.70 0.77 A 0.17 0.30 0.23 0000 --- --- --- --- 171368 00000 ------------ A 0.82 0.81 0.81 G 0.18 0.19 0.19 0000 --- --- --- --- 176866 00000 ------------ A 0.71 0.80 0.76 G 0.29 0.20 0.24 0000 --- --- --- --- 176884 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 177424 02389 3' UTR A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 177447 02412 3' UTR G 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 177461 02426 3' UTR C 0.68 0.45 0.57 T 0.32 0.55 0.43 0000 --- --- --- --- 177495 02460 3' UTR G 0.72 0.80 0.76 A 0.28 0.20 0.24 0000 --- --- --- --- 177556 02521 3' UTR G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 177778 02743 3' UTR G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 177920 02885 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 178078 03043 3' UTR G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 178330 03295 3' UTR G 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 178380 03345 3' UTR C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003159: ACCTTAGGCGTGGTTG 004873: A 007498: A 009265: AAAC 020241: T 071904: T 072588: AAGG 098573: CCA 099549: G 100718: T 125000: CT 148537: TTC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000483 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000673 00000 ------------ C 0.50 0.95 0.72 T 0.50 0.05 0.28 0000 --- --- --- --- 000754 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000786 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000788 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000891 00000 ------------ C 0.57 0.96 0.77 T 0.43 0.04 0.23 0000 --- --- --- --- 001103 00000 ------------ G 0.48 0.96 0.72 A 0.52 0.04 0.28 0000 --- --- --- --- 001121 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001122 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001130 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001247 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 001436 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001472 00000 ------------ T 0.57 0.96 0.77 C 0.43 0.04 0.23 0000 --- --- --- --- 001650 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002145 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002277 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002802 00000 ------------ G 0.55 0.95 0.74 A 0.45 0.05 0.26 0000 --- --- --- --- 002909 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003136 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003504 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003514 00000 ------------ C 0.33 0.68 0.51 A 0.67 0.32 0.49 0000 --- --- --- --- 003519 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003614 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 003651 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003796 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004416 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 004418 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 005124 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005218 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 005297 00000 ------------ T 0.50 0.96 0.74 C 0.50 0.04 0.26 0000 --- --- --- --- 005437 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005571 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005791 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005955 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005995 00000 ------------ G 0.86 0.67 0.76 C 0.14 0.33 0.24 0000 --- --- --- --- 006380 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006438 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006663 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 006676 00000 ------------ G 0.50 0.96 0.73 A 0.50 0.04 0.27 0000 --- --- --- --- 006922 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007213 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007319 00355 NON-SYN A 0.48 0.96 0.72 G 0.52 0.04 0.28 0115 CAT CGT HIS(H) ARG(R) 007477 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 007511 00000 ------------ T 0.95 0.83 0.89 A 0.05 0.17 0.11 0000 --- --- --- --- 007629 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007708 00000 ------------ A 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 008023 00000 ------------ T 0.70 0.35 0.52 C 0.30 0.65 0.48 0000 --- --- --- --- 008059 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008102 00000 ------------ - 0.30 0.65 0.48 + 0.70 0.35 0.52 0000 --- --- --- --- 008139 00467 SYNON G 0.57 0.96 0.76 A 0.43 0.04 0.24 0152 ACG ACA THR(T) THR(T) 008253 00581 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0190 AAG AAA LYS(K) LYS(K) 008627 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 008804 00776 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0255 TGC TGT CYS(C) CYS(C) 008995 00000 ------------ C 0.70 0.35 0.52 T 0.30 0.65 0.48 0000 --- --- --- --- 009706 00000 ------------ T 0.95 0.83 0.89 C 0.05 0.17 0.11 0000 --- --- --- --- 010175 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 010180 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010591 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 010718 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010734 00000 ------------ C 0.72 0.95 0.83 T 0.28 0.05 0.17 0000 --- --- --- --- 011120 00000 ------------ C 0.61 0.96 0.78 G 0.39 0.04 0.22 0000 --- --- --- --- 011205 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 011225 00000 ------------ T 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 011306 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011445 00000 ------------ G 0.59 0.96 0.77 T 0.41 0.04 0.23 0000 --- --- --- --- 011449 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 011494 00000 ------------ A 0.87 0.70 0.78 T 0.13 0.30 0.22 0000 --- --- --- --- 011548 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011668 00000 ------------ C 0.72 0.96 0.84 T 0.28 0.04 0.16 0000 --- --- --- --- 012051 01036 NON-SYN T 1.00 0.98 0.99 C 0.00 0.02 0.01 0342 ATT ACT ILE(I) THR(T) 012075 01060 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0350 CAC CGC HIS(H) ARG(R) 012536 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 012909 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013697 00000 ------------ T 0.48 0.95 0.71 C 0.52 0.05 0.29 0000 --- --- --- --- 013834 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013970 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013978 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 014523 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 014619 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014621 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 014637 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014933 00000 ------------ C 0.50 0.96 0.73 A 0.50 0.04 0.27 0000 --- --- --- --- 015158 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015188 00000 ------------ G 0.67 0.96 0.82 A 0.33 0.04 0.18 0000 --- --- --- --- 015261 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015296 00000 ------------ C 0.67 0.35 0.51 T 0.33 0.65 0.49 0000 --- --- --- --- 015576 00000 ------------ C 0.72 0.35 0.53 T 0.28 0.65 0.47 0000 --- --- --- --- 015723 00000 ------------ G 0.86 0.70 0.78 A 0.14 0.30 0.22 0000 --- --- --- --- 015992 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 016247 00000 ------------ - 0.50 0.95 0.74 + 0.50 0.05 0.26 0000 --- --- --- --- 017111 00000 ------------ G 0.87 0.70 0.78 A 0.13 0.30 0.22 0000 --- --- --- --- 017155 00000 ------------ G 0.96 0.83 0.89 A 0.04 0.17 0.11 0000 --- --- --- --- 017455 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017686 00000 ------------ A 0.80 0.50 0.66 C 0.20 0.50 0.34 0000 --- --- --- --- 018025 00000 ------------ C 0.87 0.70 0.78 T 0.13 0.30 0.22 0000 --- --- --- --- 018180 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018365 01597 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0529 CTT CCT LEU(L) PRO(P) 018486 01718 NON-SYN T 0.96 1.00 0.98 G 0.04 0.00 0.02 0569 GAT GAG ASP(D) GLU(E) 018771 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019289 00000 ------------ G 0.52 0.96 0.74 A 0.48 0.04 0.26 0000 --- --- --- --- 019331 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019457 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019587 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019593 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019594 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019615 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019617 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019708 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019778 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019882 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019946 00000 ------------ A 0.70 0.35 0.52 G 0.30 0.65 0.48 0000 --- --- --- --- 019973 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 020013 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 020096 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020186 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020368 00000 ------------ T 0.52 0.96 0.74 C 0.48 0.04 0.26 0000 --- --- --- --- 020378 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020380 00000 ------------ - 0.48 0.96 0.72 + 0.52 0.04 0.28 0000 --- --- --- --- 020389 00000 ------------ - 0.48 0.96 0.72 + 0.52 0.04 0.28 0000 --- --- --- --- 020402 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 020703 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 020714 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 020739 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 020758 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020871 00000 ------------ A 0.50 0.95 0.72 G 0.50 0.05 0.28 0000 --- --- --- --- 021053 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 021066 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 021084 00000 ------------ - 0.87 1.00 0.93 + 0.13 0.00 0.07 0000 --- --- --- --- 021388 00000 ------------ T 0.50 0.95 0.72 C 0.50 0.05 0.28 0000 --- --- --- --- 021543 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 021774 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 021908 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022066 00000 ------------ T 0.87 0.70 0.78 C 0.13 0.30 0.22 0000 --- --- --- --- 022094 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 022231 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022424 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022425 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 022480 00000 ------------ T 0.87 0.70 0.78 G 0.13 0.30 0.22 0000 --- --- --- --- 022535 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022550 00000 ------------ C 0.52 0.96 0.74 T 0.48 0.04 0.26 0000 --- --- --- --- 022920 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024056 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024090 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024211 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024302 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 024870 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024884 00000 ------------ G 0.57 0.95 0.76 A 0.43 0.05 0.24 0000 --- --- --- --- 024905 00000 ------------ A 0.87 0.70 0.79 T 0.13 0.30 0.21 0000 --- --- --- --- 025150 00000 ------------ A 0.63 0.59 0.61 C 0.37 0.41 0.39 0000 --- --- --- --- 025152 00000 ------------ A 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 025176 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 025213 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 025388 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025391 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025859 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 025999 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 026156 00000 ------------ G 0.50 0.96 0.74 A 0.50 0.04 0.26 0000 --- --- --- --- 026239 00000 ------------ C 0.78 0.52 0.65 T 0.22 0.48 0.35 0000 --- --- --- --- 026240 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026268 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026350 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026714 00000 ------------ T 0.70 0.35 0.54 C 0.30 0.65 0.46 0000 --- --- --- --- 026773 00000 ------------ A 0.70 0.35 0.53 T 0.30 0.65 0.47 0000 --- --- --- --- 026815 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 026924 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 027138 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027464 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027555 00000 ------------ G 0.87 0.70 0.78 A 0.13 0.30 0.22 0000 --- --- --- --- 027612 00000 ------------ - 0.54 0.96 0.75 + 0.46 0.04 0.25 0000 --- --- --- --- 027875 00000 ------------ C 0.70 0.34 0.52 T 0.30 0.66 0.48 0000 --- --- --- --- 028094 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028159 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028477 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 028552 01817 SYNON C 0.31 0.65 0.51 T 0.69 0.35 0.49 0602 AAC AAT ASN(N) ASN(N) 028842 00000 ------------ C 0.95 0.80 0.87 G 0.05 0.20 0.13 0000 --- --- --- --- 029171 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 029253 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029289 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029294 00000 ------------ A 0.87 0.70 0.78 G 0.13 0.30 0.22 0000 --- --- --- --- 029477 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 029581 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029620 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 029686 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029759 00000 ------------ T 0.72 0.35 0.53 G 0.28 0.65 0.47 0000 --- --- --- --- 029937 02086 3' UTR G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 029991 02140 3' UTR G 0.83 0.70 0.77 A 0.17 0.30 0.23 0000 --- --- --- --- 030157 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030877 00000 ------------ C 0.52 0.95 0.73 T 0.48 0.05 0.27 0000 --- --- --- --- 031127 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 031378 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031386 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 008102: A 008627: TAAA 011449: GA 013978: C 014621: CTAT 016247: TGAG 020380: ACT 020389: AA 020714: T 021066: TA 021084: TA 024302: TTAT 025176: AT 027612: G 028477: GTT 029253: CATTTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000212 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001335 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001959 00000 ------------ C 0.94 0.93 0.94 T 0.06 0.07 0.06 0000 --- --- --- --- 002372 00000 ------------ C 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 002713 00000 ------------ T 0.94 0.89 0.91 C 0.06 0.11 0.09 0000 --- --- --- --- 002890 00000 ------------ G 0.82 0.91 0.87 A 0.18 0.09 0.13 0000 --- --- --- --- 002953 00000 ------------ A 0.93 0.90 0.92 G 0.07 0.10 0.08 0000 --- --- --- --- 003035 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003507 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003599 00000 ------------ T 0.94 0.94 0.94 C 0.06 0.06 0.06 0000 --- --- --- --- 003605 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003696 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 003711 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 003783 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003798 00000 ------------ T 0.94 0.89 0.91 C 0.06 0.11 0.09 0000 --- --- --- --- 003896 00000 ------------ G 1.00 0.92 0.96 A 0.00 0.08 0.04 0000 --- --- --- --- 003905 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003926 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 004821 00000 ------------ G 0.93 0.94 0.94 A 0.07 0.06 0.06 0000 --- --- --- --- 004832 00000 ------------ T 0.83 0.83 0.83 C 0.17 0.17 0.17 0000 --- --- --- --- 004833 00000 ------------ G 0.94 0.92 0.93 A 0.06 0.08 0.07 0000 --- --- --- --- 004934 00000 ------------ G 0.96 0.94 0.95 A 0.04 0.06 0.05 0000 --- --- --- --- 004992 00000 ------------ T 0.89 0.81 0.86 C 0.11 0.19 0.14 0000 --- --- --- --- 005080 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005389 00000 ------------ G 0.75 0.26 0.51 C 0.25 0.74 0.49 0000 --- --- --- --- 005453 00511 SYNON C 0.77 1.00 0.88 T 0.23 0.00 0.12 0160 CCC CCT PRO(P) PRO(P) 005467 00525 NON-SYN C 0.96 0.93 0.95 T 0.04 0.07 0.05 0165 ACG ATG THR(T) MET(M) 005552 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006146 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 006325 00000 ------------ C 0.94 0.91 0.92 A 0.06 0.09 0.08 0000 --- --- --- --- 006722 00000 ------------ G 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 007081 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 007120 00000 ------------ - 0.04 0.07 0.06 + 0.96 0.93 0.94 0000 --- --- --- --- 007530 00000 ------------ C 0.96 0.93 0.94 G 0.04 0.07 0.06 0000 --- --- --- --- 007834 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008444 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 008494 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008660 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 009117 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009389 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009602 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009707 00000 ------------ G 0.94 0.88 0.91 A 0.06 0.12 0.09 0000 --- --- --- --- 009719 00000 ------------ T 0.94 0.88 0.91 C 0.06 0.12 0.09 0000 --- --- --- --- 009807 00000 ------------ T 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 010121 01264 SYNON G 0.95 0.89 0.92 A 0.05 0.11 0.08 0411 CCG CCA PRO(P) PRO(P) 010297 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 010537 00000 ------------ C 0.98 0.93 0.95 G 0.02 0.07 0.05 0000 --- --- --- --- 010998 00000 ------------ G 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 011111 00000 ------------ T 0.30 0.74 0.52 C 0.70 0.26 0.48 0000 --- --- --- --- 011292 00000 ------------ T 0.71 0.91 0.81 C 0.29 0.09 0.19 0000 --- --- --- --- 011874 00000 ------------ T 0.96 0.95 0.95 C 0.04 0.05 0.05 0000 --- --- --- --- 011975 00000 ------------ - 0.57 0.80 0.68 + 0.43 0.20 0.32 0000 --- --- --- --- 011986 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012043 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 012232 00000 ------------ - 0.05 0.11 0.08 + 0.95 0.89 0.92 0000 --- --- --- --- 012324 00000 ------------ T 0.95 0.89 0.92 G 0.05 0.11 0.08 0000 --- --- --- --- 013135 00000 ------------ G 0.94 0.90 0.92 T 0.06 0.10 0.08 0000 --- --- --- --- 013434 00000 ------------ T 0.92 0.92 0.92 C 0.08 0.08 0.08 0000 --- --- --- --- 013799 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014168 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 014818 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015001 00000 ------------ C 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 015124 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 015354 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015940 00000 ------------ A 0.94 0.89 0.91 G 0.06 0.11 0.09 0000 --- --- --- --- 016061 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016129 00000 ------------ T 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 016270 00000 ------------ C 0.71 0.91 0.79 T 0.29 0.09 0.21 0000 --- --- --- --- 017668 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 017726 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017796 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018247 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 018288 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 018390 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018403 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018520 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 018521 00000 ------------ G 0.92 0.90 0.91 A 0.08 0.10 0.09 0000 --- --- --- --- 018650 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 018762 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018774 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 018867 00000 ------------ C 0.94 0.94 0.94 T 0.06 0.06 0.06 0000 --- --- --- --- 018984 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019215 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019350 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 019366 00000 ------------ C 0.93 0.88 0.90 T 0.07 0.12 0.10 0000 --- --- --- --- 019392 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020054 00000 ------------ A 0.46 0.74 0.59 G 0.54 0.26 0.41 0000 --- --- --- --- 020078 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 020117 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 020192 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020274 00000 ------------ C 0.96 1.00 0.97 T 0.04 0.00 0.03 0000 --- --- --- --- 020292 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020399 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020603 00000 ------------ C 0.86 0.43 0.65 T 0.14 0.57 0.35 0000 --- --- --- --- 020745 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020946 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020949 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 020970 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021239 00000 ------------ G 0.93 0.50 0.70 A 0.07 0.50 0.30 0000 --- --- --- --- 021396 01855 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0608 CGC CGT ARG(R) ARG(R) 021629 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021732 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021988 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007120: TG 008660: GAGGGGAT 011975: AGG 012232: AGG 018247: AATCAATC 018288: CTTTATC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000234 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 000352 00000 ------------ G 0.64 0.52 0.58 A 0.36 0.48 0.42 0000 --- --- --- --- 000636 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000709 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 001184 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001631 00000 ------------ - 0.50 0.75 0.63 + 0.50 0.25 0.37 0000 --- --- --- --- 002081 00275 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002372 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 002502 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002762 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 002860 00000 ------------ G 0.67 0.52 0.60 A 0.33 0.48 0.40 0000 --- --- --- --- 002930 00000 ------------ T 0.83 0.74 0.78 C 0.17 0.26 0.22 0000 --- --- --- --- 002940 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002952 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003252 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 003481 00000 ------------ G 0.50 0.76 0.61 C 0.50 0.24 0.39 0000 --- --- --- --- 003525 00000 ------------ C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 003948 00000 ------------ A 0.83 0.74 0.79 G 0.17 0.26 0.21 0000 --- --- --- --- 004017 00000 ------------ A 0.78 0.74 0.76 C 0.22 0.26 0.24 0000 --- --- --- --- 004038 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 004087 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004107 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 004336 00000 ------------ G 0.66 0.52 0.59 A 0.34 0.48 0.41 0000 --- --- --- --- 004393 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 004617 00000 ------------ A 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 004925 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005072 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005128 00000 ------------ T 0.81 0.74 0.78 G 0.19 0.26 0.22 0000 --- --- --- --- 005159 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005210 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005276 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005428 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005472 00000 ------------ G 0.65 0.53 0.60 A 0.35 0.47 0.40 0000 --- --- --- --- 005480 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 005515 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005580 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005681 00000 ------------ A 0.90 0.74 0.82 G 0.10 0.26 0.18 0000 --- --- --- --- 005695 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005708 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005944 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 006090 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006695 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 006708 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006963 00000 ------------ A 0.71 0.74 0.72 G 0.29 0.26 0.28 0000 --- --- --- --- 006992 00000 ------------ G 0.65 0.50 0.57 A 0.35 0.50 0.43 0000 --- --- --- --- 007764 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007881 00000 ------------ T 0.81 1.00 0.91 C 0.19 0.00 0.09 0000 --- --- --- --- 007940 00000 ------------ G 0.83 1.00 0.92 T 0.17 0.00 0.08 0000 --- --- --- --- 007966 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008076 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008149 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 008470 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008649 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009061 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 009113 00000 ------------ C 0.48 0.80 0.64 A 0.52 0.20 0.36 0000 --- --- --- --- 009247 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009918 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 010217 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010635 00000 ------------ A 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 010709 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011084 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011471 00000 ------------ - 0.16 0.21 0.18 + 0.84 0.79 0.82 0000 --- --- --- --- 011489 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011498 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012231 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013127 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013435 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 013512 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013520 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014244 00000 ------------ A 0.84 0.59 0.72 G 0.16 0.41 0.28 0000 --- --- --- --- 014336 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 014572 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014594 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014836 00000 ------------ A 0.54 0.73 0.63 G 0.46 0.27 0.37 0000 --- --- --- --- 015261 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 015865 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016005 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016351 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016596 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 017049 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 017220 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017272 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017702 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 017840 00000 ------------ C 0.92 0.76 0.84 A 0.08 0.24 0.16 0000 --- --- --- --- 018141 00000 ------------ A 0.92 0.93 0.93 T 0.08 0.07 0.07 0000 --- --- --- --- 018583 00859 SYNON T 1.00 0.98 0.99 G 0.00 0.02 0.01 0172 TCT TCG SER(S) SER(S) 018836 01112 NON-SYN G 1.00 0.97 0.99 T 0.00 0.03 0.01 0257 GTG TTG VAL(V) LEU(L) 019302 01578 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0412 TCT TAT SER(S) TYR(Y) 019389 01665 3' UTR T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 020711 02987 3' UTR A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020741 03017 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020813 03089 3' UTR T 0.83 0.67 0.76 C 0.17 0.33 0.24 0000 --- --- --- --- 020871 03147 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021052 03328 3' UTR A 0.85 0.80 0.83 C 0.15 0.20 0.17 0000 --- --- --- --- 021185 03461 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021252 03528 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021781 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022157 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022247 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 022492 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022688 00000 ------------ A 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 023029 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 023094 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 023283 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 023319 00000 ------------ A 0.93 0.75 0.84 T 0.07 0.25 0.16 0000 --- --- --- --- 023528 00000 ------------ A 0.80 0.75 0.77 T 0.20 0.25 0.23 0000 --- --- --- --- 023685 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023765 00000 ------------ C 0.95 0.77 0.86 T 0.05 0.23 0.14 0000 --- --- --- --- 023859 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 024372 00000 ------------ G 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 024408 00000 ------------ G 0.91 0.76 0.84 A 0.09 0.24 0.16 0000 --- --- --- --- 024509 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 024643 00000 ------------ T 0.85 0.78 0.82 C 0.15 0.22 0.18 0000 --- --- --- --- 024649 00000 ------------ C 0.83 0.78 0.80 A 0.17 0.22 0.20 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001631: GGCCGCGGGAAGC 005944: AT 011471: T 011498: T 016005: TCTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000467 00000 ------------ G 0.98 0.85 0.91 A 0.02 0.15 0.09 0000 --- --- --- --- 000531 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000678 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000829 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 000925 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001538 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001622 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001623 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002122 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002254 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002457 00000 ------------ C 0.98 0.83 0.90 G 0.02 0.17 0.10 0000 --- --- --- --- 002561 00100 5' UTR T 0.79 0.62 0.72 C 0.21 0.38 0.28 0000 --- --- --- --- 002667 00206 NON-SYN C 1.00 0.96 0.98 T 0.00 0.04 0.02 0021 TCC TTC SER(S) PHE(F) 002770 00000 ------------ G 0.98 0.85 0.91 A 0.02 0.15 0.09 0000 --- --- --- --- 003069 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003119 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 003151 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003263 00000 ------------ C 0.77 0.57 0.67 G 0.23 0.43 0.33 0000 --- --- --- --- 003306 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003330 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003331 00000 ------------ A 1.00 0.85 0.93 T 0.00 0.15 0.07 0000 --- --- --- --- 003353 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003417 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004160 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004456 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004500 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004663 00000 ------------ C 0.52 0.57 0.54 T 0.48 0.43 0.46 0000 --- --- --- --- 004715 00000 ------------ C 0.94 0.76 0.85 G 0.06 0.24 0.15 0000 --- --- --- --- 004972 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 005065 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005159 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005295 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005296 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005366 00000 ------------ C 0.96 0.70 0.83 T 0.04 0.30 0.17 0000 --- --- --- --- 005684 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005786 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005791 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005931 00000 ------------ A 0.48 0.55 0.51 G 0.52 0.45 0.49 0000 --- --- --- --- 006175 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006257 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006275 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006361 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 006476 00000 ------------ A 0.98 0.85 0.91 C 0.02 0.15 0.09 0000 --- --- --- --- 006586 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 006647 00000 ------------ C 0.53 0.57 0.55 A 0.47 0.43 0.45 0000 --- --- --- --- 006673 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 006701 00000 ------------ G 0.52 0.52 0.52 A 0.48 0.48 0.48 0000 --- --- --- --- 006843 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006861 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006946 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006961 00000 ------------ G 0.48 0.61 0.54 A 0.52 0.39 0.46 0000 --- --- --- --- 007007 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007008 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007193 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 007687 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007979 00000 ------------ T 0.52 0.57 0.54 C 0.48 0.43 0.46 0000 --- --- --- --- 008060 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008462 00000 ------------ G 0.82 0.57 0.69 A 0.18 0.43 0.31 0000 --- --- --- --- 008573 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008630 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008990 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009783 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009986 00000 ------------ G 0.98 0.91 0.94 A 0.02 0.09 0.06 0000 --- --- --- --- 010063 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010117 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010318 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010535 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010671 00000 ------------ C 0.74 1.00 0.87 T 0.26 0.00 0.13 0000 --- --- --- --- 010681 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 010722 00000 ------------ T 0.96 0.76 0.86 G 0.04 0.24 0.14 0000 --- --- --- --- 010727 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010732 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011016 00000 ------------ G 0.93 0.72 0.83 A 0.07 0.28 0.17 0000 --- --- --- --- 011216 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011653 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011998 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012000 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012199 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012239 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012273 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 012321 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012364 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012722 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012756 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013020 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013245 00000 ------------ G 0.54 0.57 0.55 A 0.46 0.43 0.45 0000 --- --- --- --- 013531 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013605 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 013949 00000 ------------ G 0.79 0.57 0.68 A 0.21 0.43 0.32 0000 --- --- --- --- 014016 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014128 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014220 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 014578 00000 ------------ A 0.44 0.57 0.50 G 0.56 0.43 0.50 0000 --- --- --- --- 014829 00000 ------------ G 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 015447 00000 ------------ - 0.23 0.04 0.14 + 0.77 0.96 0.86 0000 --- --- --- --- 015777 00000 ------------ T 0.48 0.57 0.52 C 0.52 0.43 0.48 0000 --- --- --- --- 015810 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 015954 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016496 00765 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0207 ATC ATT ILE(I) ILE(I) 016684 00953 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0270 CGA CAA ARG(R) GLN(Q) 016746 01015 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0291 ACT GCT THR(T) ALA(A) 017090 01359 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017098 01367 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017147 01416 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017256 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 017492 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017512 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017566 00000 ------------ T 0.77 0.96 0.86 A 0.23 0.04 0.14 0000 --- --- --- --- 017649 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017683 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 017791 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018088 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018092 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004456: T 005159: C 006361: TTAAA 006843: G 007193: T 008060: C 015447: T 017256: ATCAGT 017683: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000419 00000 ------------ A 0.62 0.80 0.71 G 0.38 0.20 0.29 0000 --- --- --- --- 000483 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000506 00000 ------------ A 0.68 0.68 0.68 G 0.32 0.32 0.32 0000 --- --- --- --- 000507 00000 ------------ T 0.68 0.82 0.75 C 0.32 0.18 0.25 0000 --- --- --- --- 000512 00000 ------------ G 0.70 0.82 0.76 A 0.30 0.18 0.24 0000 --- --- --- --- 000535 00000 ------------ C 0.70 0.82 0.76 T 0.30 0.18 0.24 0000 --- --- --- --- 000937 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001007 00039 5' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001156 00188 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0015 TTG TCG LEU(L) SER(S) 001430 00000 ------------ A 0.93 0.95 0.94 G 0.07 0.05 0.06 0000 --- --- --- --- 002055 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 002120 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002136 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002168 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002174 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 002448 00000 ------------ C 0.85 0.83 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 002535 00000 ------------ C 0.48 0.76 0.62 T 0.52 0.24 0.38 0000 --- --- --- --- 002800 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 002866 00000 ------------ A 0.52 0.77 0.65 T 0.48 0.23 0.35 0000 --- --- --- --- 003116 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003135 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003281 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 003386 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003553 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003565 00000 ------------ C 0.93 0.90 0.92 T 0.07 0.10 0.08 0000 --- --- --- --- 003610 00000 ------------ + 1.00 0.98 0.99 - 0.00 0.02 0.01 0000 --- --- --- --- 003694 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 003734 00000 ------------ C 0.77 0.59 0.68 T 0.23 0.41 0.32 0000 --- --- --- --- 003850 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003976 00000 ------------ + 0.35 0.46 0.40 - 0.65 0.54 0.60 0000 --- --- --- --- 004223 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 004264 00000 ------------ G 0.77 0.59 0.68 C 0.23 0.41 0.32 0000 --- --- --- --- 004305 00000 ------------ C 0.71 0.59 0.65 G 0.29 0.41 0.35 0000 --- --- --- --- 004464 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004556 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004580 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 004627 00000 ------------ T 0.81 0.59 0.70 C 0.19 0.41 0.30 0000 --- --- --- --- 004635 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 004747 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004778 00000 ------------ C 0.93 0.96 0.95 A 0.07 0.04 0.05 0000 --- --- --- --- 004949 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005091 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005126 00000 ------------ C 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 005312 00000 ------------ A 0.79 0.50 0.64 T 0.21 0.50 0.36 0000 --- --- --- --- 005416 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 005439 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 006165 00673 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0177 ATG GTG MET(M) VAL(V) 006384 00892 NON-SYN A 0.94 0.95 0.95 G 0.06 0.05 0.05 0250 AAC GAC ASN(N) ASP(D) 006767 01275 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006802 01310 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006863 01371 3' UTR A 0.60 0.54 0.57 G 0.40 0.46 0.43 0000 --- --- --- --- 006867 01375 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006896 01404 3' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 007176 01684 3' UTR G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 007228 01736 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007325 00000 ------------ T 0.76 0.45 0.61 C 0.24 0.55 0.39 0000 --- --- --- --- 007638 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007728 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007767 00000 ------------ T 0.75 0.48 0.62 C 0.25 0.52 0.38 0000 --- --- --- --- 007792 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008181 00000 ------------ A 0.76 0.46 0.61 G 0.24 0.54 0.39 0000 --- --- --- --- 008398 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008437 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 008453 00000 ------------ C 0.79 0.50 0.64 A 0.21 0.50 0.36 0000 --- --- --- --- 008571 00000 ------------ + 0.88 0.62 0.76 - 0.12 0.38 0.24 0000 --- --- --- --- 008704 00000 ------------ T 0.82 0.50 0.67 G 0.18 0.50 0.33 0000 --- --- --- --- 008769 00000 ------------ A 0.81 0.50 0.66 G 0.19 0.50 0.34 0000 --- --- --- --- 009117 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 009139 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002174: C 003610: C 003976: C 004223: TGAG 008437: A 008571: TTGTTATTAATACCCATTATATTCCTGTAA 009117: CA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000342 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000413 00000 ------------ + 0.75 0.73 0.74 - 0.25 0.27 0.26 0000 --- --- --- --- 000906 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 001071 00040 5' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001103 00072 5' UTR C 0.83 0.46 0.65 T 0.17 0.54 0.35 0000 --- --- --- --- 001157 00126 5' UTR G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 001337 00000 ------------ G 0.27 0.87 0.56 A 0.73 0.13 0.44 0000 --- --- --- --- 001375 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001437 00000 ------------ C 0.27 0.85 0.55 T 0.73 0.15 0.45 0000 --- --- --- --- 001453 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 002366 01061 NON-SYN T 0.90 1.00 0.95 G 0.10 0.00 0.05 0296 TTC GTC PHE(F) VAL(V) 002409 01104 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0310 CCG CTG PRO(P) LEU(L) 002446 01141 SYNON C 0.91 1.00 0.96 T 0.09 0.00 0.04 0322 TAC TAT TYR(Y) TYR(Y) 002560 01255 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0360 CCG CCA PRO(P) PRO(P) 002757 01452 3' UTR G 0.91 0.67 0.79 A 0.09 0.33 0.21 0000 --- --- --- --- 002852 01547 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003021 01716 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003063 01758 3' UTR G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 003108 01803 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003282 01977 3' UTR A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003327 02022 3' UTR C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 003564 02259 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003761 02456 3' UTR C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004202 02897 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004587 03282 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004611 EXON2 +2 SPLICE C 0.90 0.67 0.79 T 0.10 0.33 0.21 0000 --- --- --- --- 004759 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 004765 00000 ------------ C 1.00 0.85 0.93 T 0.00 0.15 0.07 0000 --- --- --- --- 004995 00000 ------------ G 0.81 0.48 0.65 T 0.19 0.52 0.35 0000 --- --- --- --- 005255 00000 ------------ T 0.89 0.67 0.78 C 0.11 0.33 0.22 0000 --- --- --- --- 005980 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 006236 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 006389 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006594 00000 ------------ T 0.83 0.70 0.77 A 0.17 0.30 0.23 0000 --- --- --- --- 006693 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006913 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007196 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007285 00000 ------------ + 0.12 0.00 0.07 - 0.88 1.00 0.93 0000 --- --- --- --- 007328 00000 ------------ G 0.88 0.70 0.79 A 0.12 0.30 0.21 0000 --- --- --- --- 007915 00000 ------------ + 0.17 0.33 0.26 - 0.83 0.68 0.74 0000 --- --- --- --- 008013 00000 ------------ G 0.88 0.70 0.79 A 0.12 0.30 0.21 0000 --- --- --- --- 008173 00000 ------------ A 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 008966 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009079 00000 ------------ G 1.00 0.78 0.88 C 0.00 0.23 0.12 0000 --- --- --- --- 009331 03417 3' UTR A 0.76 0.83 0.79 T 0.24 0.17 0.21 0000 --- --- --- --- 010597 04683 3' UTR A 0.75 0.83 0.79 G 0.25 0.17 0.21 0000 --- --- --- --- 010727 04813 3' UTR A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011235 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011423 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011424 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011609 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000413: G 007285: A 007915: AGCT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000599 00000 ------------ T 0.62 0.52 0.57 C 0.38 0.48 0.43 0000 --- --- --- --- 000969 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001089 00000 ------------ C 0.75 0.52 0.64 T 0.25 0.48 0.36 0000 --- --- --- --- 001269 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001826 00000 ------------ G 0.65 0.52 0.59 A 0.35 0.48 0.41 0000 --- --- --- --- 003494 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003586 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 003825 00229 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0036 ACA GCA THR(T) ALA(A) 004302 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004354 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004524 00000 ------------ C 0.79 0.62 0.71 T 0.21 0.38 0.29 0000 --- --- --- --- 004590 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004639 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004806 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005106 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 005153 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005258 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005334 00000 ------------ A 0.86 0.78 0.82 G 0.14 0.22 0.18 0000 --- --- --- --- 005500 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005660 00000 ------------ T 0.72 0.50 0.61 G 0.28 0.50 0.39 0000 --- --- --- --- 005730 00000 ------------ C 0.65 0.50 0.58 T 0.35 0.50 0.42 0000 --- --- --- --- 006321 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006632 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 006933 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007171 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007533 00000 ------------ T 0.52 0.52 0.52 C 0.48 0.48 0.48 0000 --- --- --- --- 007713 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007754 00000 ------------ G 0.71 0.52 0.62 A 0.29 0.48 0.38 0000 --- --- --- --- 007877 00000 ------------ A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 008144 00456 SYNON G 0.89 1.00 0.94 T 0.11 0.00 0.06 0111 CCG CCT PRO(P) PRO(P) 008292 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008366 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 008975 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009421 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009527 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 009590 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009630 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 009827 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009893 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009929 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010085 00000 ------------ C 0.78 0.78 0.78 T 0.22 0.22 0.22 0000 --- --- --- --- 010224 00000 ------------ A 0.80 0.41 0.61 G 0.20 0.59 0.39 0000 --- --- --- --- 010247 00000 ------------ T 0.48 0.59 0.53 C 0.52 0.41 0.47 0000 --- --- --- --- 010345 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010852 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010940 00556 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0145 ATT GTT ILE(I) VAL(V) 011185 00000 ------------ T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 011372 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011990 00000 ------------ - 0.75 0.79 0.77 + 0.25 0.21 0.23 0000 --- --- --- --- 011993 00000 ------------ - 0.23 0.20 0.21 + 0.77 0.80 0.79 0000 --- --- --- --- 012066 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012457 00000 ------------ C 0.88 0.75 0.82 T 0.12 0.25 0.18 0000 --- --- --- --- 013222 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013566 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 013925 01208 3' UTR G 0.75 0.78 0.77 A 0.25 0.22 0.23 0000 --- --- --- --- 013966 01249 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014156 01439 3' UTR C 0.90 0.81 0.86 T 0.10 0.19 0.14 0000 --- --- --- --- 014162 01445 3' UTR C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 014330 01613 3' UTR G 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 014652 01935 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014957 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014987 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 016740 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016967 00000 ------------ G 0.83 0.81 0.82 A 0.17 0.19 0.18 0000 --- --- --- --- 016970 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005153: T 010345: AAG 011990: C 011993: TG 013566: TTGACTAG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000251 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000366 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000369 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 000825 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 000881 00000 ------------ T 0.87 0.96 0.91 C 0.13 0.04 0.09 0000 --- --- --- --- 001065 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001067 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001113 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001119 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001191 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 001330 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001387 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 001587 00000 ------------ G 0.48 0.91 0.69 A 0.52 0.09 0.31 0000 --- --- --- --- 001592 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 001818 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 001846 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002055 00140 NON-SYN G 0.95 1.00 0.98 A 0.05 0.00 0.02 0015 GGC AGC GLY(G) SER(S) 002407 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 002845 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003578 00000 ------------ C 0.75 0.54 0.65 G 0.25 0.46 0.35 0000 --- --- --- --- 003776 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003830 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004070 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004073 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004096 00000 ------------ G 0.94 0.96 0.95 C 0.06 0.04 0.05 0000 --- --- --- --- 004247 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004436 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 004526 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 004619 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004853 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 004974 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005353 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 005391 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006102 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 006197 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006543 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006560 00000 ------------ - 0.07 0.41 0.24 + 0.93 0.59 0.76 0000 --- --- --- --- 006674 00000 ------------ C 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 007046 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007047 00000 ------------ C 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 007180 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007211 00000 ------------ - 0.98 0.98 0.98 + 0.02 0.02 0.02 0000 --- --- --- --- 007302 00000 ------------ G 0.85 0.96 0.90 C 0.15 0.04 0.10 0000 --- --- --- --- 011055 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 011306 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011307 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011381 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 011414 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011792 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011799 00000 ------------ C 0.92 0.59 0.76 T 0.08 0.41 0.24 0000 --- --- --- --- 011812 00000 ------------ C 0.92 0.59 0.76 T 0.08 0.41 0.24 0000 --- --- --- --- 014611 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 014612 00000 ------------ G 0.90 0.59 0.74 A 0.10 0.41 0.26 0000 --- --- --- --- 014685 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 014742 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014835 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014917 00000 ------------ C 0.91 0.57 0.74 A 0.09 0.43 0.26 0000 --- --- --- --- 014934 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 015028 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015419 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015444 00000 ------------ - 0.17 0.43 0.29 + 0.83 0.57 0.71 0000 --- --- --- --- 015499 00000 ------------ G 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 015672 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 015708 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015784 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015794 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 015831 00000 ------------ G 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 016121 00416 NON-SYN G 0.67 0.98 0.83 C 0.33 0.02 0.17 0107 GAT CAT ASP(D) HIS(H) 016469 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016534 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 016541 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016639 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 016700 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016738 00000 ------------ T 0.85 0.57 0.71 G 0.15 0.43 0.29 0000 --- --- --- --- 016906 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017042 00000 ------------ A 0.75 0.59 0.66 G 0.25 0.41 0.34 0000 --- --- --- --- 017212 00000 ------------ T 0.91 0.59 0.74 C 0.09 0.41 0.26 0000 --- --- --- --- 017300 00000 ------------ G 0.91 0.59 0.74 T 0.09 0.41 0.26 0000 --- --- --- --- 017339 00000 ------------ - 0.18 0.41 0.31 + 0.82 0.59 0.69 0000 --- --- --- --- 017357 00000 ------------ - 0.85 0.59 0.72 + 0.15 0.41 0.28 0000 --- --- --- --- 017557 00000 ------------ G 0.94 0.70 0.82 A 0.06 0.30 0.18 0000 --- --- --- --- 017586 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 017683 00000 ------------ - 0.92 0.59 0.76 + 0.08 0.41 0.24 0000 --- --- --- --- 017714 00000 ------------ G 0.85 0.59 0.72 A 0.15 0.41 0.28 0000 --- --- --- --- 017926 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017980 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017991 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018289 00000 ------------ A 0.69 0.98 0.83 C 0.31 0.02 0.17 0000 --- --- --- --- 018354 00000 ------------ C 0.86 0.59 0.72 T 0.14 0.41 0.28 0000 --- --- --- --- 018504 00000 ------------ T 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 018795 00000 ------------ G 0.85 0.65 0.75 A 0.15 0.35 0.25 0000 --- --- --- --- 019034 00000 ------------ A 0.43 0.89 0.66 C 0.57 0.11 0.34 0000 --- --- --- --- 019041 00000 ------------ G 0.85 0.61 0.73 C 0.15 0.39 0.27 0000 --- --- --- --- 019093 00000 ------------ G 0.52 0.89 0.71 A 0.48 0.11 0.29 0000 --- --- --- --- 019171 00000 ------------ C 0.57 0.98 0.77 T 0.43 0.02 0.23 0000 --- --- --- --- 019211 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019292 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 019389 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 019390 00000 ------------ G 0.89 0.57 0.72 A 0.11 0.43 0.28 0000 --- --- --- --- 019463 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 019868 00000 ------------ - 0.10 0.39 0.25 + 0.90 0.61 0.75 0000 --- --- --- --- 019923 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 019959 00000 ------------ C 0.75 0.55 0.65 T 0.25 0.45 0.35 0000 --- --- --- --- 020057 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 020294 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 020335 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 020601 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020627 00000 ------------ G 0.95 0.61 0.78 T 0.05 0.39 0.22 0000 --- --- --- --- 020736 00000 ------------ C 0.93 0.59 0.76 T 0.07 0.41 0.24 0000 --- --- --- --- 020987 00000 ------------ T 0.70 0.47 0.60 C 0.30 0.53 0.40 0000 --- --- --- --- 021097 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021135 00000 ------------ C 0.98 0.64 0.81 A 0.02 0.36 0.19 0000 --- --- --- --- 021152* 021198 00000 ------------ G 0.97 0.65 0.81 A 0.03 0.35 0.19 0000 --- --- --- --- 026871 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 027051 00000 ------------ A 0.33 0.93 0.62 G 0.67 0.07 0.38 0000 --- --- --- --- 027061 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027106 00000 ------------ G 0.42 0.93 0.66 T 0.58 0.07 0.34 0000 --- --- --- --- 027107 00000 ------------ - 0.38 0.53 0.44 + 0.62 0.47 0.56 0000 --- --- --- --- 027277 00000 ------------ C 0.94 0.59 0.77 G 0.06 0.41 0.23 0000 --- --- --- --- 027330 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 027462 00000 ------------ G 0.42 0.91 0.66 C 0.58 0.09 0.34 0000 --- --- --- --- 027545 00000 ------------ A 0.50 0.92 0.68 G 0.50 0.08 0.32 0000 --- --- --- --- 027561 00000 ------------ C 0.69 0.97 0.81 A 0.31 0.03 0.19 0000 --- --- --- --- 027568 00000 ------------ T 0.42 0.93 0.65 G 0.58 0.07 0.35 0000 --- --- --- --- 027602 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 027665 00502 SYNON G 0.52 0.91 0.71 A 0.48 0.09 0.29 0135 GCG GCA ALA(A) ALA(A) 027812 00649 SYNON G 0.42 0.91 0.66 T 0.58 0.09 0.34 0184 TCG TCT SER(S) SER(S) 027824 00661 SYNON G 0.94 1.00 0.97 C 0.06 0.00 0.03 0188 GGG GGC GLY(G) GLY(G) 027883 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028166 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028183 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028441 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 028495 00000 ------------ T 0.41 0.91 0.67 C 0.59 0.09 0.33 0000 --- --- --- --- 028499 00000 ------------ - 0.59 0.09 0.33 + 0.41 0.91 0.67 0000 --- --- --- --- 028500 00000 ------------ G 0.50 0.50 0.50 A 0.50 0.50 0.50 0000 --- --- --- --- 028506 00000 ------------ G 0.43 0.91 0.68 A 0.57 0.09 0.32 0000 --- --- --- --- 028607 00000 ------------ T 0.41 0.91 0.66 G 0.59 0.09 0.34 0000 --- --- --- --- 028808 00000 ------------ A 0.73 0.54 0.63 G 0.27 0.46 0.37 0000 --- --- --- --- 028916 00000 ------------ G 0.41 0.91 0.67 A 0.59 0.09 0.33 0000 --- --- --- --- 029030 00000 ------------ T 0.98 0.90 0.94 A 0.02 0.10 0.06 0000 --- --- --- --- 029057 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029058 00000 ------------ G 0.43 0.91 0.68 A 0.57 0.09 0.32 0000 --- --- --- --- 029254 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 029381 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029460 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 029467 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029468 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 029565 00000 ------------ G 0.35 0.91 0.63 C 0.65 0.09 0.37 0000 --- --- --- --- 029652 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029658 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029695 00000 ------------ A 0.72 0.50 0.61 G 0.28 0.50 0.39 0000 --- --- --- --- 029784 00000 ------------ A 0.37 0.91 0.64 G 0.63 0.09 0.36 0000 --- --- --- --- 030011 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030074 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 030170 00000 ------------ - 0.50 0.09 0.30 + 0.50 0.91 0.70 0000 --- --- --- --- 030414 00000 ------------ C 0.71 0.50 0.61 T 0.29 0.50 0.39 0000 --- --- --- --- 030539 00000 ------------ A 0.98 0.87 0.93 G 0.02 0.13 0.07 0000 --- --- --- --- 030690 00000 ------------ C 0.71 0.50 0.61 G 0.29 0.50 0.39 0000 --- --- --- --- 030994 00000 ------------ C 0.71 0.50 0.61 T 0.29 0.50 0.39 0000 --- --- --- --- 031039 00000 ------------ G 0.71 0.50 0.61 C 0.29 0.50 0.39 0000 --- --- --- --- 031215 00000 ------------ A 0.72 0.52 0.62 C 0.28 0.48 0.38 0000 --- --- --- --- 031273 00000 ------------ C 0.74 0.52 0.63 T 0.26 0.48 0.37 0000 --- --- --- --- 031280 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 031340 00000 ------------ A 0.74 0.52 0.63 G 0.26 0.48 0.37 0000 --- --- --- --- 031375 00000 ------------ - 0.45 0.48 0.47 + 0.55 0.52 0.53 0000 --- --- --- --- 031621 00913 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0272 AAC AAT ASN(N) ASN(N) 031833 00000 ------------ C 0.79 0.59 0.69 T 0.21 0.41 0.31 0000 --- --- --- --- 032329 00000 ------------ G 0.59 0.95 0.80 A 0.41 0.05 0.20 0000 --- --- --- --- 032392 00000 ------------ T 0.97 0.98 0.97 C 0.03 0.02 0.03 0000 --- --- --- --- 032470 00000 ------------ C 0.97 0.98 0.97 A 0.03 0.02 0.03 0000 --- --- --- --- 032494 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 035788 01335 NON-SYN T 0.97 0.91 0.94 C 0.03 0.09 0.06 0413 ATG ACG MET(M) THR(T) 035792 01339 SYNON A 0.89 0.89 0.89 G 0.11 0.11 0.11 0414 AAA AAG LYS(K) LYS(K) 035908 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 036088 00000 ------------ T 0.97 0.98 0.98 C 0.03 0.02 0.02 0000 --- --- --- --- 036090 00000 ------------ G 0.82 0.55 0.68 C 0.17 0.45 0.32 0000 --- --- --- --- 036324 00000 ------------ T 0.97 0.93 0.95 G 0.03 0.07 0.05 0000 --- --- --- --- 036375 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036404 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 036647 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 036648 00000 ------------ T 0.75 0.70 0.72 A 0.25 0.30 0.28 0000 --- --- --- --- 036953 00000 ------------ C 0.77 0.54 0.66 T 0.23 0.46 0.34 0000 --- --- --- --- 037049 00000 ------------ C 0.74 0.78 0.76 T 0.26 0.22 0.24 0000 --- --- --- --- 037092 00000 ------------ C 0.78 0.78 0.78 T 0.22 0.22 0.22 0000 --- --- --- --- 037181 00000 ------------ C 0.91 0.87 0.89 A 0.09 0.13 0.11 0000 --- --- --- --- 037182 00000 ------------ C 0.74 0.78 0.76 G 0.26 0.22 0.24 0000 --- --- --- --- 038092 00000 ------------ C 0.87 0.78 0.83 T 0.13 0.22 0.17 0000 --- --- --- --- 038104 00000 ------------ G 0.74 0.46 0.60 C 0.26 0.54 0.40 0000 --- --- --- --- 038133 00000 ------------ A 0.84 0.83 0.84 G 0.16 0.17 0.16 0000 --- --- --- --- 038224 00000 ------------ C 0.54 0.52 0.53 T 0.46 0.48 0.47 0000 --- --- --- --- 038337 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 038529 01635 NON-SYN G 0.65 1.00 0.83 A 0.35 0.00 0.17 0513 AGA AAA ARG(R) LYS(K) 038592 01698 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0534 CGA CAA ARG(R) GLN(Q) 041915 01813 SYNON G 0.98 0.91 0.94 A 0.02 0.09 0.06 0572 GAG GAA GLU(E) GLU(E) 042105 00000 ------------ G 0.84 0.78 0.81 A 0.16 0.22 0.19 0000 --- --- --- --- 042112 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042195 00000 ------------ - 0.80 0.76 0.78 + 0.20 0.24 0.22 0000 --- --- --- --- 042262 00000 ------------ A 0.52 0.70 0.61 G 0.48 0.30 0.39 0000 --- --- --- --- 042336 00000 ------------ T 0.80 0.78 0.79 C 0.20 0.22 0.21 0000 --- --- --- --- 042347 00000 ------------ G 0.80 0.78 0.79 C 0.20 0.22 0.21 0000 --- --- --- --- 042439 00000 ------------ A 0.80 0.78 0.79 G 0.20 0.22 0.21 0000 --- --- --- --- 042460 00000 ------------ T 0.80 0.78 0.79 G 0.20 0.22 0.21 0000 --- --- --- --- 042713 00000 ------------ T 0.80 0.47 0.65 C 0.20 0.53 0.35 0000 --- --- --- --- 042853 00000 ------------ C 0.96 0.94 0.95 T 0.04 0.06 0.05 0000 --- --- --- --- 042864 00000 ------------ C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 043095 00000 ------------ C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 043135 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 043219 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 043288 00000 ------------ C 0.77 0.78 0.78 G 0.23 0.22 0.22 0000 --- --- --- --- 043306 00000 ------------ T 0.75 0.66 0.71 C 0.25 0.34 0.29 0000 --- --- --- --- 043620 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 043637 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 043703 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 044054 02017 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 0640 ACC ACT THR(T) THR(T) 044060 02023 SYNON C 0.97 0.91 0.94 A 0.03 0.09 0.06 0642 ACC ACA THR(T) THR(T) 044207 00000 ------------ G 0.78 0.78 0.78 T 0.22 0.22 0.22 0000 --- --- --- --- 044663 00000 ------------ C 0.74 0.70 0.72 T 0.26 0.30 0.28 0000 --- --- --- --- 044730 00000 ------------ G 0.76 0.76 0.76 A 0.24 0.24 0.24 0000 --- --- --- --- 044804 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 044961 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 044992 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 045000 00000 ------------ T 0.59 1.00 0.77 G 0.41 0.00 0.23 0000 --- --- --- --- 045041 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045049 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 045081 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 045119 00000 ------------ G 0.73 1.00 0.85 A 0.27 0.00 0.15 0000 --- --- --- --- 045146 00000 ------------ G 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 045523 02305 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0736 ATC ATT ILE(I) ILE(I) 045550 02332 SYNON T 0.95 1.00 0.98 C 0.05 0.00 0.02 0745 AAT AAC ASN(N) ASN(N) 045616 02398 SYNON A 0.93 1.00 0.97 G 0.07 0.00 0.03 0767 TCA TCG SER(S) SER(S) 045740 02522 NON-SYN C 0.81 1.00 0.91 T 0.19 0.00 0.09 0809 CCA TCA PRO(P) SER(S) 045765 02547 NON-SYN A 0.98 0.93 0.96 C 0.02 0.07 0.04 0817 AAC ACC ASN(N) THR(T) 045888 02670 NON-SYN A 0.73 0.79 0.76 G 0.27 0.21 0.24 0858 AAA AGA LYS(K) ARG(R) 045909 02691 NON-SYN A 0.73 0.79 0.76 G 0.27 0.21 0.24 0865 CAT CGT HIS(H) ARG(R) 046058 02840 NON-SYN A 1.00 0.93 0.97 T 0.00 0.07 0.03 0915 ACT TCT THR(T) SER(S) 046088 02870 NON-SYN A 0.73 0.77 0.75 G 0.27 0.23 0.25 0925 AAG GAG LYS(K) GLU(E) 046221 03003 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0969 AAC AGC ASN(N) SER(S) 046254 03036 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0980 CGT CTT ARG(R) LEU(L) 046753 03535 NON-SYN C 0.94 1.00 0.97 G 0.06 0.00 0.03 1146 CAC CAG HIS(H) GLN(Q) 047168 03950 NON-SYN C 0.87 0.83 0.85 A 0.13 0.17 0.15 1285 CTT ATT LEU(L) ILE(I) 047410 04192 SYNON C 0.88 0.59 0.74 T 0.12 0.41 0.26 1365 ACC ACT THR(T) THR(T) 047525 04307 NON-SYN C 0.92 0.98 0.95 T 0.08 0.02 0.05 1404 CCA TCA PRO(P) SER(S) 047904 04686 NON-SYN A 1.00 0.98 0.99 C 0.00 0.02 0.01 1530 GAG GCG GLU(E) ALA(A) 048160 00000 ------------ A 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 048178 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 048904 00000 ------------ T 0.72 0.78 0.75 A 0.28 0.22 0.25 0000 --- --- --- --- 048932 00000 ------------ - 0.11 0.43 0.27 + 0.89 0.57 0.73 0000 --- --- --- --- 049067 00000 ------------ T 0.56 0.70 0.63 G 0.44 0.30 0.37 0000 --- --- --- --- 050927 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 051402 00000 ------------ T 0.69 0.70 0.70 C 0.31 0.30 0.30 0000 --- --- --- --- 052348 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 052485 00000 ------------ A 0.54 0.66 0.60 G 0.46 0.34 0.40 0000 --- --- --- --- 052814 00000 ------------ G 0.75 0.75 0.75 A 0.25 0.25 0.25 0000 --- --- --- --- 052903 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 053321 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 053322 00000 ------------ C 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 053508 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 057160 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 057162 00000 ------------ C 0.97 0.91 0.94 T 0.03 0.09 0.06 0000 --- --- --- --- 057295 00000 ------------ C 0.76 0.76 0.76 T 0.24 0.24 0.24 0000 --- --- --- --- 057433 05119 SYNON A 0.88 0.98 0.93 G 0.12 0.02 0.07 1674 GGA GGG GLY(G) GLY(G) 057692 00000 ------------ G 0.75 0.76 0.76 A 0.25 0.24 0.24 0000 --- --- --- --- 057948 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 057984 00000 ------------ A 0.54 0.70 0.62 T 0.46 0.30 0.38 0000 --- --- --- --- 058262 00000 ------------ T 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 058453 00000 ------------ T 0.54 0.74 0.63 C 0.46 0.26 0.37 0000 --- --- --- --- 058808 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 058809 00000 ------------ G 0.91 0.98 0.95 A 0.09 0.02 0.05 0000 --- --- --- --- 058979 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 059210 00000 ------------ C 0.91 0.97 0.94 T 0.09 0.03 0.06 0000 --- --- --- --- 059283 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 059462 00000 ------------ G 0.80 0.83 0.81 A 0.20 0.17 0.19 0000 --- --- --- --- 059717 00000 ------------ A 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 059762 00000 ------------ G 0.88 0.76 0.82 A 0.12 0.24 0.18 0000 --- --- --- --- 059794 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 059823 00000 ------------ C 0.76 0.79 0.78 T 0.24 0.21 0.22 0000 --- --- --- --- 059912 00000 ------------ A 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 060029 00000 ------------ G 0.97 0.93 0.95 A 0.03 0.07 0.05 0000 --- --- --- --- 061303 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 061346 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 061390 00000 ------------ G 0.80 0.45 0.63 A 0.20 0.55 0.37 0000 --- --- --- --- 061432 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 061458 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 061859 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 062074 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 062210 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 062642 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 062647 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 062835 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 063047 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 063142 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 063143 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 063240 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 063259 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 063447 00000 ------------ G 0.54 0.73 0.63 A 0.46 0.27 0.37 0000 --- --- --- --- 063748 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 063917 00000 ------------ C 0.83 0.37 0.60 G 0.17 0.63 0.40 0000 --- --- --- --- 063930 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 064034 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 064967 00000 ------------ G 0.75 0.76 0.76 A 0.25 0.24 0.24 0000 --- --- --- --- 065028 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 065388 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 065520 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 065543 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 065669 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 065844 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 066464 00000 ------------ G 0.81 0.86 0.84 T 0.19 0.14 0.16 0000 --- --- --- --- 066473 00000 ------------ - 0.19 0.07 0.13 + 0.81 0.93 0.87 0000 --- --- --- --- 066494 00000 ------------ C 0.80 0.77 0.79 T 0.20 0.23 0.21 0000 --- --- --- --- 066614 00000 ------------ - 0.74 0.76 0.75 + 0.26 0.24 0.25 0000 --- --- --- --- 066872 00000 ------------ C 0.60 0.78 0.69 T 0.40 0.22 0.31 0000 --- --- --- --- 067043 00000 ------------ C 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 067052 00000 ------------ T 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 067243 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 067252 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 067262 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 067698 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 068059 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 068132 00000 ------------ T 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 068155 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 068167 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 068286 00000 ------------ A 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 068441 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 068621 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 068717 00000 ------------ G 0.67 0.45 0.57 A 0.33 0.55 0.43 0000 --- --- --- --- 068859 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 068980 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 069823 00000 ------------ C 0.98 0.95 0.96 A 0.02 0.05 0.04 0000 --- --- --- --- 070698 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 070877 00000 ------------ A 0.74 0.75 0.74 C 0.26 0.25 0.26 0000 --- --- --- --- 071003 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 071143 00000 ------------ C 0.74 0.77 0.76 G 0.26 0.23 0.24 0000 --- --- --- --- 071503 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 071516 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 071785 00000 ------------ A 0.67 0.45 0.57 T 0.33 0.55 0.43 0000 --- --- --- --- 072018 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 072160 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 072244 00000 ------------ C 0.67 0.43 0.55 A 0.33 0.57 0.45 0000 --- --- --- --- 072744 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 072877 06540 NON-SYN T 1.00 0.95 0.98 C 0.00 0.05 0.02 2148 ATG ACG MET(M) THR(T) 073092 00000 ------------ A 0.71 0.72 0.71 C 0.29 0.28 0.29 0000 --- --- --- --- 073193 00000 ------------ - 0.02 0.04 0.03 + 0.98 0.96 0.97 0000 --- --- --- --- 073272 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 073399 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 073800 00000 ------------ G 0.71 0.75 0.73 A 0.29 0.25 0.27 0000 --- --- --- --- 074966 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 074984 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 075208 00000 ------------ C 0.75 0.43 0.59 T 0.25 0.57 0.41 0000 --- --- --- --- 075211 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 075339 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 075383 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 075529 00000 ------------ T 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 075694 00000 ------------ C 0.74 0.79 0.76 T 0.26 0.21 0.24 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006560: GTTT 007211: T 011055: T 015444: G 017339: TTTA 017357: TCC 017683: A 019868: A 027107: G 028499: CA 029381: CT 030170: T 031280: CA 031375: T 036404: ATT 042195: AT 044961: C 048932: AAC 057160: A 063047: T 065388: AAAG 066473: A 066614: A 073193: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 021152 C 0.82 0.67 0.74 G 0.10 0.33 0.22 T 0.07 0.00 0.04 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000043 00000 ------------ C 0.87 0.79 0.83 T 0.13 0.21 0.17 0000 --- --- --- --- 000115 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 000184 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000185 00000 ------------ G 0.92 0.78 0.85 A 0.08 0.22 0.15 0000 --- --- --- --- 000214 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000347 00000 ------------ A 0.70 0.89 0.79 G 0.30 0.11 0.21 0000 --- --- --- --- 000405 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000668 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000897 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 001428 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001704 00000 ------------ A 0.87 0.76 0.82 C 0.13 0.24 0.18 0000 --- --- --- --- 001744 00000 ------------ A 0.87 0.76 0.82 G 0.13 0.24 0.18 0000 --- --- --- --- 001811 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001972 00000 ------------ G 0.88 0.76 0.82 A 0.12 0.24 0.18 0000 --- --- --- --- 001973 00000 ------------ G 0.73 0.91 0.82 T 0.27 0.09 0.18 0000 --- --- --- --- 002050 00000 ------------ - 0.73 0.91 0.82 + 0.27 0.09 0.18 0000 --- --- --- --- 002241 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002254 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002262 00000 ------------ T 0.85 0.95 0.90 C 0.15 0.05 0.10 0000 --- --- --- --- 002455 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002456 00000 ------------ G 0.73 0.91 0.82 A 0.27 0.09 0.18 0000 --- --- --- --- 002643 00000 ------------ A 0.60 0.67 0.64 G 0.40 0.33 0.36 0000 --- --- --- --- 003083 00000 ------------ T 0.81 0.71 0.76 C 0.19 0.29 0.24 0000 --- --- --- --- 003430 00159 SYNON G 0.97 1.00 0.99 A 0.03 0.00 0.01 0036 CCG CCA PRO(P) PRO(P) 010813 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011119 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011454 00000 ------------ A 1.00 0.88 0.94 C 0.00 0.12 0.06 0000 --- --- --- --- 011574 00000 ------------ G 0.88 0.95 0.92 C 0.12 0.05 0.08 0000 --- --- --- --- 011656 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011848 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011867 00000 ------------ T 0.76 0.90 0.83 G 0.24 0.10 0.17 0000 --- --- --- --- 012145 00000 ------------ G 0.90 0.95 0.92 A 0.10 0.05 0.08 0000 --- --- --- --- 012296 00576 SYNON C 0.90 0.96 0.93 T 0.10 0.04 0.07 0175 CAC CAT HIS(H) HIS(H) 012588 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012879 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012897 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013104 00000 ------------ G 0.89 0.93 0.91 A 0.11 0.07 0.09 0000 --- --- --- --- 013851 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014153 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 014266 00000 ------------ C 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 014773 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 014934 00000 ------------ G 0.90 0.95 0.93 A 0.10 0.05 0.07 0000 --- --- --- --- 014944 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 015202 01105 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0352 GCC ACC ALA(A) THR(T) 015386 01289 NON-SYN G 0.88 0.96 0.91 A 0.12 0.04 0.09 0413 CGG CAG ARG(R) GLN(Q) 015481 01384 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0445 GAG AAG GLU(E) LYS(K) 016190 02093 3' UTR G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 016224 02127 3' UTR A 0.95 0.97 0.96 G 0.05 0.03 0.04 0000 --- --- --- --- 016321 02224 3' UTR G 0.88 0.95 0.91 A 0.12 0.05 0.09 0000 --- --- --- --- 016542 02445 3' UTR G 0.90 0.95 0.93 A 0.10 0.05 0.07 0000 --- --- --- --- 016697 00000 ------------ A 0.89 0.95 0.92 G 0.11 0.05 0.08 0000 --- --- --- --- 016791 00000 ------------ C 0.96 1.00 0.97 G 0.04 0.00 0.03 0000 --- --- --- --- 016826 00000 ------------ A 0.91 0.94 0.92 G 0.09 0.06 0.08 0000 --- --- --- --- 017026 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017200 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 017437 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017464 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 017886 00000 ------------ G 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 018311 00000 ------------ C 0.92 0.41 0.67 T 0.08 0.59 0.33 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002050: CCTATATCCT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001263 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 001389 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002289 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 002290 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 002621 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 002966 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 003386 00273 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0034 GAC GAT ASP(D) ASP(D) 003560 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010186 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016292 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 016367 00000 ------------ G 0.97 0.98 0.98 C 0.03 0.02 0.02 0000 --- --- --- --- 016715 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017223 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 017345 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 025088 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025167 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 025226 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026489 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 027257 00000 ------------ A 1.00 0.92 0.96 C 0.00 0.08 0.04 0000 --- --- --- --- 027636 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 027892 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 028722 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028977 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028997 00000 ------------ G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 029216 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029389 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 033426 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 033427 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 033438 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 039144 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040893 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 041574 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 055941 00000 ------------ G 0.72 0.25 0.50 C 0.28 0.75 0.50 0000 --- --- --- --- 059122 00000 ------------ G 0.75 0.79 0.77 A 0.25 0.21 0.23 0000 --- --- --- --- 059225 01257 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0362 GCG GCA ALA(A) ALA(A) 059481 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 060320 00000 ------------ C 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 064646 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 069308 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 069384 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 069583 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 070739 00000 ------------ G 0.67 0.83 0.74 A 0.33 0.17 0.26 0000 --- --- --- --- 071032 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 071159 00000 ------------ G 0.63 0.83 0.73 A 0.37 0.17 0.27 0000 --- --- --- --- 076817 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 077366 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 077465 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 078327 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 093110 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 095667 03792 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 1207 CAC CAT HIS(H) HIS(H) 095826 03951 NON-SYN C 0.42 0.76 0.59 G 0.58 0.24 0.41 1260 GAC GAG ASP(D) GLU(E) 095910 04035 SYNON A 0.94 0.98 0.96 C 0.06 0.02 0.04 1288 TCA TCC SER(S) SER(S) 097912 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 118673 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 120140 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 120679 00000 ------------ A 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 122021 00000 ------------ A 0.75 0.26 0.51 T 0.25 0.74 0.49 0000 --- --- --- --- 122266 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 123554 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 123888 00000 ------------ C 0.75 0.26 0.52 T 0.25 0.74 0.48 0000 --- --- --- --- 125247 00000 ------------ A 0.33 0.76 0.54 T 0.67 0.24 0.46 0000 --- --- --- --- 125317 00000 ------------ C 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 125413 00000 ------------ C 0.62 0.80 0.71 T 0.38 0.20 0.29 0000 --- --- --- --- 125487 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 126174 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 127121 00000 ------------ A 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 127376 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 127386 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 127390 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 127537 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 127609 00000 ------------ - 1.00 0.93 0.97 + 0.00 0.07 0.03 0000 --- --- --- --- 130120 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 130670 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 161469 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 161500 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 161758 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 161767 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 161952 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 162270 00000 ------------ - 0.00 0.07 0.04 + 1.00 0.93 0.96 0000 --- --- --- --- 163006 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 163593 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 163597 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 163669 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 163682 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 163685 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 165145 00000 ------------ G 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 165293 06940 NON-SYN A 0.91 1.00 0.96 G 0.09 0.00 0.04 2257 ATG GTG MET(M) VAL(V) 165607 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 187597 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 187661 00000 ------------ G 0.98 0.90 0.94 A 0.02 0.10 0.06 0000 --- --- --- --- 187828 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 188288 07256 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 189406 08374 3' UTR - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 189551 08519 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 189931 08899 3' UTR G 0.75 0.25 0.51 A 0.25 0.75 0.49 0000 --- --- --- --- 190119 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 190196 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 190426 00000 ------------ A 0.40 0.74 0.56 G 0.60 0.26 0.44 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002966: T 059481: A 127609: ATCTATTCTCGTGAGAAGGC 162270: CCT 189406: TCCAGTCTGCCATATCAC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000323 00000 ------------ T 0.48 0.52 0.50 C 0.52 0.48 0.50 0000 --- --- --- --- 000393 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 000716 00000 ------------ A 0.50 0.52 0.51 G 0.50 0.48 0.49 0000 --- --- --- --- 000811 00000 ------------ T 0.55 0.50 0.53 C 0.45 0.50 0.47 0000 --- --- --- --- 000948 00000 ------------ T 0.76 0.95 0.85 G 0.24 0.05 0.15 0000 --- --- --- --- 002044 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002113* 002306 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002826 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003285 00000 ------------ T 0.54 0.48 0.51 C 0.46 0.52 0.49 0000 --- --- --- --- 003387 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003464 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003544 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003555 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003596 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003748 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003828 00000 ------------ G 0.78 1.00 0.88 A 0.22 0.00 0.12 0000 --- --- --- --- 003879 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004135 00000 ------------ T 0.50 0.67 0.58 C 0.50 0.33 0.42 0000 --- --- --- --- 005238 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005256* 005265 00000 ------------ T 0.58 0.46 0.52 C 0.42 0.54 0.48 0000 --- --- --- --- 005333 00000 ------------ C 0.54 0.48 0.51 T 0.46 0.52 0.49 0000 --- --- --- --- 005365 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005415 00000 ------------ A 0.60 0.45 0.53 T 0.40 0.55 0.47 0000 --- --- --- --- 006139 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 006142 00000 ------------ G 0.95 0.96 0.95 A 0.05 0.04 0.05 0000 --- --- --- --- 006321 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006347 00000 ------------ G 0.47 0.57 0.52 A 0.53 0.43 0.48 0000 --- --- --- --- 006531 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 006667 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 008108 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 008129 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008344 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008478 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 008609 00000 ------------ C 0.92 0.70 0.81 G 0.08 0.30 0.19 0000 --- --- --- --- 008681 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008731 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008821 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009003 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 009007 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 009088 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 009364 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 009475 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 009551 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 009578 00000 ------------ A 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 009780 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 009814 00000 ------------ - 0.80 1.00 0.90 + 0.20 0.00 0.10 0000 --- --- --- --- 009883 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010309 00000 ------------ A 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 010377 00000 ------------ T 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 010525 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 010609 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010948 00000 ------------ C 0.77 0.81 0.79 T 0.23 0.19 0.21 0000 --- --- --- --- 011340 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011452 00000 ------------ G 0.70 1.00 0.85 A 0.30 0.00 0.15 0000 --- --- --- --- 011472 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011854 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011902 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012049 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 012377 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012651 00000 ------------ A 0.92 0.61 0.77 G 0.08 0.39 0.23 0000 --- --- --- --- 012806 00000 ------------ T 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 014809 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015185 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015452 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015502 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015584 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 015610 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 015751 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016095 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 016171 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 016780 00000 ------------ - 0.44 0.68 0.55 + 0.56 0.32 0.45 0000 --- --- --- --- 016846 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016951 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 017007 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 017170 00000 ------------ G 0.44 0.72 0.57 A 0.56 0.28 0.43 0000 --- --- --- --- 017264 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017371 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 017796 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 017802 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 017851 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 018131 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 019910 00000 ------------ A 1.00 0.83 0.91 G 0.00 0.17 0.09 0000 --- --- --- --- 020465 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 021511 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021554 00000 ------------ A 0.45 0.71 0.56 C 0.55 0.29 0.44 0000 --- --- --- --- 021975 -----** NON-SYN A 0.90 0.65 0.77 G 0.10 0.35 0.23 0194 ACT GCT THR(T) ALA(A) 022592 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 022594 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 022880 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 023398 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 023749 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 024633 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 024664 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 024769 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024925 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025460 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026211 00000 ------------ C 0.65 0.78 0.72 G 0.35 0.22 0.28 0000 --- --- --- --- 026273 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 026750 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 026793 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 026892 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 027151 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 027214 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027226 00000 ------------ T 0.72 0.76 0.74 C 0.28 0.24 0.26 0000 --- --- --- --- 027306 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027501 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 027517 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027842 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028158 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 028410 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028427 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028585 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028671 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 029064 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029144 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029287 00000 ------------ G 0.88 0.78 0.83 C 0.12 0.22 0.17 0000 --- --- --- --- 029317 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029436 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029548 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029552 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 029555 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029617 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029766 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 029816 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 030191 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 030197 00000 ------------ T 0.68 0.78 0.73 C 0.33 0.22 0.27 0000 --- --- --- --- 030564 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030634 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 030662 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030893 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 031089 00000 ------------ T 0.75 0.82 0.78 C 0.25 0.18 0.22 0000 --- --- --- --- 031168 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 031206 00000 ------------ A 0.75 0.82 0.78 G 0.25 0.18 0.22 0000 --- --- --- --- 031922 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 032113 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032922 -----** NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0461 ACT CCT THR(T) PRO(P) 033403 -----** 3' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033614 -----** 3' UTR G 0.67 0.82 0.74 A 0.33 0.18 0.26 0000 --- --- --- --- 034508 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034569 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 035124 00000 ------------ C 0.80 0.91 0.86 G 0.20 0.09 0.14 0000 --- --- --- --- 035243 00000 ------------ C 0.80 0.91 0.86 G 0.20 0.09 0.14 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006139: A 006531: CA 009814: CAAA 010525: A 015185: TAGT 016780: T 018131: AAT 022880: A 029436: A 031168: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 002113 A 0.04 0.00 0.02 G 0.96 0.98 0.97 T 0.00 0.02 0.01 005256 A 0.42 0.50 0.46 C 0.58 0.46 0.52 G 0.00 0.04 0.02 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000262 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000286 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000741 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000838 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000849 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001330 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002900 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003045 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003054 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003486 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003574 00353 FRAME SHIFT - 0.02 0.02 0.02 + 0.98 0.98 0.98 0116 G-C GCC --- --- 003662 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003730 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003981 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004190 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004235 00000 ------------ G 0.68 0.84 0.76 A 0.32 0.16 0.24 0000 --- --- --- --- 005414 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005459 00000 ------------ - 0.67 0.59 0.63 + 0.33 0.41 0.37 0000 --- --- --- --- 005782 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 006282 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006419 00000 ------------ C 0.91 0.59 0.75 A 0.09 0.41 0.25 0000 --- --- --- --- 006564 00000 ------------ C 0.91 0.59 0.75 A 0.09 0.41 0.25 0000 --- --- --- --- 006704 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 006926 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 007245 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007379 00756 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0250 CAC CAT HIS(H) HIS(H) 007935 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 007992 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 008264 00000 ------------ T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 008349 00000 ------------ C 0.60 0.57 0.59 T 0.40 0.43 0.41 0000 --- --- --- --- 008455 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 008720 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 009279 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003574: C 005459: GGCCAAATA 007935: GTTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000218 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000251 00000 ------------ G 0.47 0.70 0.60 A 0.53 0.30 0.40 0000 --- --- --- --- 000506 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 000841 00000 ------------ A 0.90 0.91 0.91 G 0.10 0.09 0.09 0000 --- --- --- --- 001176 00000 ------------ T 0.40 0.70 0.54 G 0.60 0.30 0.46 0000 --- --- --- --- 001782 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002154 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002224 00000 ------------ G 0.68 0.70 0.69 A 0.32 0.30 0.31 0000 --- --- --- --- 002297 00046 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0006 ATC GTC ILE(I) VAL(V) 002694 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002696 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003585 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003655 00000 ------------ G 0.87 0.89 0.88 A 0.13 0.11 0.12 0000 --- --- --- --- 003740 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003752 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003807 00000 ------------ T 0.93 0.78 0.86 C 0.07 0.22 0.14 0000 --- --- --- --- 003845 00000 ------------ G 0.93 0.98 0.96 A 0.07 0.02 0.04 0000 --- --- --- --- 005191 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005203 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005498 00000 ------------ T 0.92 0.89 0.90 C 0.08 0.11 0.10 0000 --- --- --- --- 005521 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006534 01021 NON-SYN A 0.50 0.80 0.65 G 0.50 0.20 0.35 0331 ACT GCT THR(T) ALA(A) 006909 01396 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0456 ACC GCC THR(T) ALA(A) 007886 00000 ------------ T 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 007983 00000 ------------ C 0.96 1.00 0.97 T 0.04 0.00 0.03 0000 --- --- --- --- 008077 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 008834 02616 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0862 CCC CCT PRO(P) PRO(P) 009205 02987 3' UTR C 0.87 0.88 0.88 T 0.13 0.12 0.12 0000 --- --- --- --- 009659 03441 3' UTR C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000040 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000472 00000 ------------ G 0.93 0.80 0.87 A 0.07 0.20 0.13 0000 --- --- --- --- 000675 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000749 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000899 00000 ------------ C 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 001038 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 001437 00000 ------------ G 0.94 0.80 0.87 A 0.06 0.20 0.13 0000 --- --- --- --- 001442 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001643 00000 ------------ C 0.85 0.78 0.82 T 0.15 0.22 0.18 0000 --- --- --- --- 001744 00000 ------------ C 0.94 0.80 0.87 T 0.06 0.20 0.13 0000 --- --- --- --- 002240 00000 ------------ G 0.93 0.80 0.87 A 0.07 0.20 0.13 0000 --- --- --- --- 002360 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002620 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002623 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002867 00000 ------------ G 0.92 0.80 0.86 A 0.08 0.20 0.14 0000 --- --- --- --- 002933 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 003471 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 003582 00000 ------------ T 0.94 0.80 0.87 G 0.06 0.20 0.13 0000 --- --- --- --- 003958 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004110 00000 ------------ C 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 004199 00000 ------------ T 0.92 0.80 0.86 A 0.08 0.20 0.14 0000 --- --- --- --- 004219 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004375 00000 ------------ T 0.93 0.82 0.87 C 0.07 0.18 0.13 0000 --- --- --- --- 004457 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004512 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004872 -----** NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0100 CCA TCA PRO(P) SER(S) 004950 00000 ------------ G 0.94 0.80 0.87 C 0.06 0.20 0.13 0000 --- --- --- --- 005616 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005713 00000 ------------ C 0.94 0.80 0.87 T 0.06 0.20 0.13 0000 --- --- --- --- 005801 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006491 -----** NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0170 AAT CAT ASN(N) HIS(H) 006550 -----** SYNON C 0.94 0.80 0.87 T 0.06 0.20 0.13 0189 AGC AGT SER(S) SER(S) 006814 00000 ------------ A 0.94 0.80 0.87 G 0.06 0.20 0.13 0000 --- --- --- --- 006824 00000 ------------ A 0.85 0.89 0.87 G 0.15 0.11 0.13 0000 --- --- --- --- 006943 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007337 -----** NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0265 CCG CTG PRO(P) LEU(L) 007742 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 007838 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008072 -----** SYNON G 0.88 1.00 0.94 T 0.12 0.00 0.06 0281 GTG GTT VAL(V) VAL(V) 008381 00000 ------------ - 0.06 0.20 0.13 + 0.94 0.80 0.87 0000 --- --- --- --- 008885 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008937 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009003 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 009487 -----** NON-SYN G 0.94 0.80 0.87 A 0.06 0.20 0.13 0478 AGG AAG ARG(R) LYS(K) 009903 -----** 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009952 -----** 3' UTR A 0.88 0.67 0.78 C 0.12 0.33 0.22 0000 --- --- --- --- 009973 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 009977 00000 ------------ T 0.94 0.80 0.87 C 0.06 0.20 0.13 0000 --- --- --- --- 010149 00000 ------------ C 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 010447 00000 ------------ C 0.94 0.80 0.87 G 0.06 0.20 0.13 0000 --- --- --- --- 010599 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 010898 00000 ------------ G 0.94 0.80 0.87 A 0.06 0.20 0.13 0000 --- --- --- --- 011046 00000 ------------ T 0.94 0.80 0.87 C 0.06 0.20 0.13 0000 --- --- --- --- 011079 00000 ------------ C 0.87 0.67 0.77 T 0.13 0.33 0.23 0000 --- --- --- --- 011146 00000 ------------ A 0.93 0.80 0.87 T 0.07 0.20 0.13 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002933: AT 008381: GTTT 009003: GA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000129 00000 ------------ A 0.67 0.84 0.76 T 0.33 0.16 0.24 0000 --- --- --- --- 000608 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000902 00000 ------------ A 0.86 0.40 0.64 G 0.14 0.60 0.36 0000 --- --- --- --- 000945 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001635 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002671 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003604 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003810 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003977 00460 NON-SYN T 0.95 1.00 0.98 C 0.05 0.00 0.02 0140 TAT CAT TYR(Y) HIS(H) 004433 00613 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0191 GGG AGG GLY(G) ARG(R) 004763 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004773 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005060 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005459 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 005729 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 005836 00000 ------------ G 1.00 0.89 0.94 A 0.00 0.11 0.06 0000 --- --- --- --- 006533 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007874 00000 ------------ G 0.73 0.86 0.79 A 0.27 0.14 0.21 0000 --- --- --- --- 007962 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008085 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 008165 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009079 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 009340 00000 ------------ T 0.73 0.78 0.76 C 0.27 0.22 0.24 0000 --- --- --- --- 009595 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 009615 00000 ------------ C 0.68 0.88 0.78 T 0.33 0.12 0.23 0000 --- --- --- --- 009765 00000 ------------ T 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 010034 00000 ------------ C 0.67 0.86 0.76 T 0.33 0.14 0.24 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000095 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 000223 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000413 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000454 00000 ------------ C 0.50 0.66 0.58 T 0.50 0.34 0.42 0000 --- --- --- --- 000475 00000 ------------ C 0.67 0.98 0.82 T 0.33 0.02 0.18 0000 --- --- --- --- 000606 00000 ------------ C 0.85 0.36 0.62 T 0.15 0.64 0.38 0000 --- --- --- --- 000645 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 000689 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000711 00000 ------------ G 0.67 0.98 0.82 A 0.33 0.02 0.18 0000 --- --- --- --- 000868 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 000902 00000 ------------ C 0.85 0.35 0.61 T 0.15 0.65 0.39 0000 --- --- --- --- 000987 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 001063 00000 ------------ A 0.48 0.67 0.57 G 0.52 0.33 0.43 0000 --- --- --- --- 001064 00000 ------------ G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 001279 00000 ------------ T 0.48 0.67 0.57 C 0.52 0.33 0.43 0000 --- --- --- --- 001630 00000 ------------ T 0.80 0.34 0.58 C 0.20 0.66 0.42 0000 --- --- --- --- 001662 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001789 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 002106 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 002250 00000 ------------ A 0.93 0.98 0.96 T 0.07 0.02 0.04 0000 --- --- --- --- 002495 00000 ------------ A 0.87 0.37 0.62 T 0.13 0.63 0.38 0000 --- --- --- --- 002508 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002588 00000 ------------ C 0.67 0.33 0.50 T 0.33 0.67 0.50 0000 --- --- --- --- 002770 00000 ------------ C 0.80 0.33 0.58 T 0.20 0.67 0.42 0000 --- --- --- --- 002777 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 002877 00000 ------------ A 0.79 0.32 0.55 G 0.21 0.68 0.45 0000 --- --- --- --- 002883 00000 ------------ A 0.93 0.68 0.80 C 0.07 0.32 0.20 0000 --- --- --- --- 003160 00000 ------------ G 0.80 0.32 0.57 A 0.20 0.68 0.43 0000 --- --- --- --- 003245 00000 ------------ G 0.67 0.32 0.50 A 0.33 0.68 0.50 0000 --- --- --- --- 003303 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 003348 00000 ------------ T 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 003366 00000 ------------ A 0.80 0.32 0.57 T 0.20 0.68 0.43 0000 --- --- --- --- 003696 00000 ------------ A 0.93 0.67 0.80 G 0.07 0.33 0.20 0000 --- --- --- --- 003742 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003917 00000 ------------ C 0.78 0.33 0.55 G 0.22 0.67 0.45 0000 --- --- --- --- 003989 00000 ------------ G 0.78 1.00 0.89 A 0.22 0.00 0.11 0000 --- --- --- --- 004009 00000 ------------ C 0.37 0.67 0.52 A 0.63 0.33 0.48 0000 --- --- --- --- 004054 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 004199 00000 ------------ G 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 004347 00000 ------------ A 0.78 0.33 0.55 T 0.22 0.67 0.45 0000 --- --- --- --- 004608 00000 ------------ A 0.78 0.33 0.55 G 0.22 0.67 0.45 0000 --- --- --- --- 004637 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 004689 00000 ------------ T 0.93 0.67 0.80 C 0.07 0.33 0.20 0000 --- --- --- --- 004706 00000 ------------ G 0.93 0.67 0.80 A 0.07 0.33 0.20 0000 --- --- --- --- 004711 00000 ------------ G 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 004736 00000 ------------ A 0.85 0.37 0.61 G 0.15 0.63 0.39 0000 --- --- --- --- 004748 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 004779 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005068 00000 ------------ T 0.67 0.98 0.82 C 0.33 0.02 0.18 0000 --- --- --- --- 005197 00000 ------------ A 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 005380 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006016 00000 ------------ A 0.85 0.35 0.61 G 0.15 0.65 0.39 0000 --- --- --- --- 006475 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006516 00000 ------------ G 0.85 0.34 0.61 A 0.15 0.66 0.39 0000 --- --- --- --- 006581 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006629 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006818 00000 ------------ A 0.52 0.67 0.60 G 0.48 0.33 0.40 0000 --- --- --- --- 007027 00000 ------------ A 0.85 0.35 0.61 C 0.15 0.65 0.39 0000 --- --- --- --- 007060* 007085 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007219 00000 ------------ C 0.48 0.66 0.57 T 0.52 0.34 0.43 0000 --- --- --- --- 007224 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007324 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007349 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 007435 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007503 00000 ------------ A 0.88 0.36 0.63 G 0.12 0.64 0.37 0000 --- --- --- --- 007551 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 007636 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007947 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008047 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 008056 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008077 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008098 00000 ------------ G 0.75 0.98 0.86 A 0.25 0.02 0.14 0000 --- --- --- --- 008107 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008151 00000 ------------ T 0.71 0.67 0.69 C 0.29 0.33 0.31 0000 --- --- --- --- 008242 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008426 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008522 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008562 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008864 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009802 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009855 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 010014 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010168 00000 ------------ C 0.48 0.67 0.57 T 0.52 0.33 0.43 0000 --- --- --- --- 010328 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 010455 00000 ------------ G 0.48 0.67 0.58 A 0.52 0.33 0.42 0000 --- --- --- --- 010684 00000 ------------ C 0.97 1.00 0.98 G 0.03 0.00 0.02 0000 --- --- --- --- 010909 00000 ------------ C 0.75 0.96 0.85 G 0.25 0.04 0.15 0000 --- --- --- --- 010942 00000 ------------ G 0.92 0.21 0.56 A 0.08 0.79 0.44 0000 --- --- --- --- 010945 00000 ------------ C 0.88 0.35 0.62 G 0.12 0.65 0.38 0000 --- --- --- --- 010961 00000 ------------ - 0.46 0.67 0.56 + 0.54 0.33 0.44 0000 --- --- --- --- 011281 00000 ------------ C 0.88 0.35 0.62 T 0.12 0.65 0.38 0000 --- --- --- --- 011287 00000 ------------ A 0.88 0.35 0.62 G 0.12 0.65 0.38 0000 --- --- --- --- 011523 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011528 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011550 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 011595 00000 ------------ C 0.85 0.35 0.61 T 0.15 0.65 0.39 0000 --- --- --- --- 011680 00000 ------------ G 0.85 0.67 0.77 C 0.15 0.33 0.23 0000 --- --- --- --- 011806 00000 ------------ A 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 011916 00153 NON-SYN T 0.92 0.67 0.80 C 0.08 0.33 0.20 0015 ATA ACA ILE(I) THR(T) 011983 00000 ------------ A 0.77 0.98 0.87 C 0.23 0.02 0.13 0000 --- --- --- --- 012007 00000 ------------ T 0.85 0.35 0.61 C 0.15 0.65 0.39 0000 --- --- --- --- 012787 00000 ------------ T 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 012864 00000 ------------ C 0.85 0.67 0.77 A 0.15 0.33 0.23 0000 --- --- --- --- 012889 00000 ------------ T 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 012940 00000 ------------ T 0.69 1.00 0.84 C 0.31 0.00 0.16 0000 --- --- --- --- 013007 00000 ------------ A 0.73 1.00 0.86 G 0.27 0.00 0.14 0000 --- --- --- --- 013071 00000 ------------ T 0.69 1.00 0.84 C 0.31 0.00 0.16 0000 --- --- --- --- 013072 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 013133 00000 ------------ G 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 013172 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 013224 00000 ------------ - 0.77 0.98 0.87 + 0.23 0.02 0.13 0000 --- --- --- --- 013265 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 015017 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 015097 00000 ------------ G 0.78 0.34 0.57 T 0.22 0.66 0.43 0000 --- --- --- --- 015127 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015210 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015248 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015249 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 015402 00323 NON-SYN A 0.78 0.34 0.57 G 0.22 0.66 0.43 0072 ATT GTT ILE(I) VAL(V) 015441 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 015483 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015602 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 015619 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 015711 00000 ------------ C 0.78 0.34 0.57 G 0.22 0.66 0.43 0000 --- --- --- --- 015738 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015763 00000 ------------ G 0.65 1.00 0.82 A 0.35 0.00 0.18 0000 --- --- --- --- 015770 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015774 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 015821 00000 ------------ T 0.67 1.00 0.83 C 0.33 0.00 0.17 0000 --- --- --- --- 016004 00000 ------------ T 0.57 1.00 0.79 C 0.43 0.00 0.21 0000 --- --- --- --- 016079 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 016209 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 016232 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 016254 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 016304 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016305 00000 ------------ C 0.63 1.00 0.82 A 0.37 0.00 0.18 0000 --- --- --- --- 016323 00000 ------------ T 0.71 1.00 0.87 G 0.29 0.00 0.13 0000 --- --- --- --- 016414 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 016642 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 016701 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016707 00000 ------------ G 0.65 0.96 0.80 T 0.35 0.04 0.20 0000 --- --- --- --- 016709 00000 ------------ A 0.50 0.96 0.73 G 0.50 0.04 0.27 0000 --- --- --- --- 016803 00000 ------------ G 0.60 0.98 0.79 A 0.40 0.02 0.21 0000 --- --- --- --- 016825 00000 ------------ G 0.60 0.98 0.79 A 0.40 0.02 0.21 0000 --- --- --- --- 016869 00000 ------------ T 0.60 0.98 0.79 G 0.40 0.02 0.21 0000 --- --- --- --- 016898 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016901 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 016947 00000 ------------ C 0.50 0.98 0.73 T 0.50 0.02 0.27 0000 --- --- --- --- 016972 00000 ------------ C 0.60 0.98 0.79 A 0.40 0.02 0.21 0000 --- --- --- --- 017098 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 017115 00000 ------------ T 0.60 0.98 0.79 C 0.40 0.02 0.21 0000 --- --- --- --- 017148 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 017244 00000 ------------ G 0.60 0.98 0.79 A 0.40 0.02 0.21 0000 --- --- --- --- 017250 00000 ------------ A 0.65 0.98 0.81 G 0.35 0.02 0.19 0000 --- --- --- --- 017352 00000 ------------ C 0.60 0.98 0.79 T 0.40 0.02 0.21 0000 --- --- --- --- 017361 00000 ------------ A 0.65 0.96 0.80 G 0.35 0.04 0.20 0000 --- --- --- --- 017451 00000 ------------ G 0.60 0.98 0.79 A 0.40 0.02 0.21 0000 --- --- --- --- 017459 00000 ------------ G 0.65 0.67 0.66 C 0.35 0.33 0.34 0000 --- --- --- --- 017478 00000 ------------ T 0.60 0.98 0.79 C 0.40 0.02 0.21 0000 --- --- --- --- 017525 00000 ------------ T 0.60 0.98 0.79 C 0.40 0.02 0.21 0000 --- --- --- --- 017557 00000 ------------ C 0.69 0.98 0.83 A 0.31 0.02 0.17 0000 --- --- --- --- 017572 00000 ------------ T 0.64 0.95 0.80 C 0.36 0.05 0.20 0000 --- --- --- --- 017593 00000 ------------ A 0.71 0.34 0.52 G 0.29 0.66 0.48 0000 --- --- --- --- 017754 00000 ------------ T 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 017809 00000 ------------ T 0.68 0.68 0.68 C 0.33 0.32 0.32 0000 --- --- --- --- 017871 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017920 00000 ------------ C 0.62 0.66 0.64 G 0.38 0.34 0.36 0000 --- --- --- --- 018002 00000 ------------ A 0.68 0.68 0.68 C 0.32 0.32 0.32 0000 --- --- --- --- 018107 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 018168 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018220 00000 ------------ C 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 019039 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 019083 00000 ------------ G 0.85 0.36 0.61 A 0.15 0.64 0.39 0000 --- --- --- --- 019219 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019235 00000 ------------ G 0.61 0.68 0.64 A 0.39 0.32 0.36 0000 --- --- --- --- 019371 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019949 00000 ------------ T 0.61 0.67 0.64 G 0.39 0.33 0.36 0000 --- --- --- --- 020024 00000 ------------ A 0.61 0.67 0.64 G 0.39 0.33 0.36 0000 --- --- --- --- 020112 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 020164 00000 ------------ G 0.70 0.98 0.83 A 0.30 0.02 0.17 0000 --- --- --- --- 020175 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 020204 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 020387 00000 ------------ G 0.85 0.34 0.61 T 0.15 0.66 0.39 0000 --- --- --- --- 020434 00000 ------------ T 0.69 1.00 0.84 C 0.31 0.00 0.16 0000 --- --- --- --- 020615 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020703 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020743 00000 ------------ A 0.65 0.66 0.65 T 0.35 0.34 0.35 0000 --- --- --- --- 020803 00000 ------------ G 0.85 0.34 0.61 A 0.15 0.66 0.39 0000 --- --- --- --- 020936 00000 ------------ T 0.92 0.66 0.79 A 0.08 0.34 0.21 0000 --- --- --- --- 020942 00000 ------------ A 0.65 0.66 0.65 G 0.35 0.34 0.35 0000 --- --- --- --- 020984 00000 ------------ C 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 021342 00000 ------------ T 0.69 0.98 0.83 C 0.31 0.02 0.17 0000 --- --- --- --- 021368 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021410 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 021428 00000 ------------ G 0.75 0.34 0.55 T 0.25 0.66 0.45 0000 --- --- --- --- 021475 00000 ------------ G 0.69 0.98 0.83 A 0.31 0.02 0.17 0000 --- --- --- --- 021962 00000 ------------ T 0.42 0.66 0.53 G 0.58 0.34 0.47 0000 --- --- --- --- 021963 00000 ------------ A 0.77 0.97 0.90 G 0.23 0.03 0.10 0000 --- --- --- --- 021997 00000 ------------ G 0.65 0.68 0.66 A 0.35 0.32 0.34 0000 --- --- --- --- 022184 00000 ------------ C 0.71 0.34 0.53 T 0.29 0.66 0.47 0000 --- --- --- --- 022522 00000 ------------ - 0.34 0.32 0.33 + 0.66 0.68 0.67 0000 --- --- --- --- 022579 00000 ------------ T 0.69 0.96 0.82 C 0.31 0.04 0.18 0000 --- --- --- --- 022632 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 022717 00000 ------------ C 0.61 0.68 0.65 G 0.39 0.32 0.35 0000 --- --- --- --- 022862 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 022881 00000 ------------ G 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 022882 00000 ------------ T 0.59 0.68 0.63 G 0.41 0.32 0.37 0000 --- --- --- --- 022883 00000 ------------ G 0.61 0.68 0.65 C 0.39 0.32 0.35 0000 --- --- --- --- 022921 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 023006 00423 NON-SYN C 0.74 0.98 0.86 T 0.26 0.02 0.14 0105 CCA CTA PRO(P) LEU(L) 023023 00440 NON-SYN T 0.96 1.00 0.98 C 0.04 0.00 0.02 0111 TAT CAT TYR(Y) HIS(H) 023053 00470 NON-SYN A 0.98 1.00 0.99 T 0.02 0.00 0.01 0121 ACT TCT THR(T) SER(S) 023356 00528 NON-SYN A 1.00 0.98 0.99 T 0.00 0.02 0.01 0140 TAT TTT TYR(Y) PHE(F) 023495 00000 ------------ - 0.33 0.00 0.15 + 0.68 1.00 0.85 0000 --- --- --- --- 023558 00000 ------------ T 0.84 0.67 0.74 C 0.16 0.33 0.26 0000 --- --- --- --- 023643 00000 ------------ T 0.53 0.67 0.62 C 0.47 0.33 0.38 0000 --- --- --- --- 023754 00000 ------------ - 0.50 0.66 0.58 + 0.50 0.34 0.42 0000 --- --- --- --- 023789 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 024241 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 024344 00000 ------------ G 0.67 0.64 0.66 C 0.33 0.36 0.34 0000 --- --- --- --- 024406 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 024451 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024568 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 024573 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024587 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 024629 00000 ------------ A 0.87 0.38 0.64 G 0.13 0.62 0.36 0000 --- --- --- --- 024665 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 024908 00000 ------------ C 0.54 0.67 0.61 T 0.46 0.33 0.39 0000 --- --- --- --- 024954 00000 ------------ G 0.48 0.67 0.58 A 0.52 0.33 0.42 0000 --- --- --- --- 025002 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 025336 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 025513 00000 ------------ C 0.43 0.67 0.56 T 0.57 0.33 0.44 0000 --- --- --- --- 025783 00000 ------------ T 0.44 0.68 0.55 C 0.56 0.32 0.45 0000 --- --- --- --- 025785 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025825 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025912 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026254 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026302 00000 ------------ G 0.44 0.68 0.55 T 0.56 0.32 0.45 0000 --- --- --- --- 026352 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026523 00000 ------------ - 0.35 0.33 0.34 + 0.65 0.67 0.66 0000 --- --- --- --- 026563 00000 ------------ G 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 026804 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026821 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026952 00000 ------------ G 0.67 0.98 0.83 C 0.33 0.02 0.17 0000 --- --- --- --- 026965 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027034 00000 ------------ T 0.65 0.67 0.66 C 0.35 0.33 0.34 0000 --- --- --- --- 027051 00000 ------------ G 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 027438 00000 ------------ C 0.87 0.34 0.61 T 0.13 0.66 0.39 0000 --- --- --- --- 027593 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027674 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 027708 00000 ------------ C 0.64 0.66 0.65 T 0.36 0.34 0.35 0000 --- --- --- --- 027855 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 027944 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027969 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028012 00000 ------------ C 0.67 1.00 0.83 G 0.33 0.00 0.17 0000 --- --- --- --- 028025 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 028169 00000 ------------ T 0.69 0.67 0.68 C 0.31 0.33 0.32 0000 --- --- --- --- 028201 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 028205 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 028590 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028987 00000 ------------ T 0.83 0.35 0.60 C 0.17 0.65 0.40 0000 --- --- --- --- 029089 00000 ------------ T 0.69 0.98 0.83 A 0.31 0.02 0.17 0000 --- --- --- --- 029143 00000 ------------ T 0.85 0.67 0.77 G 0.15 0.33 0.23 0000 --- --- --- --- 029311 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 029354 00000 ------------ G 0.45 0.67 0.57 A 0.55 0.33 0.43 0000 --- --- --- --- 029376 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 029501 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 029521 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 029583 00000 ------------ T 0.84 0.67 0.76 C 0.16 0.33 0.24 0000 --- --- --- --- 029662 00000 ------------ A 0.45 0.67 0.56 G 0.55 0.33 0.44 0000 --- --- --- --- 029847 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 029873 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 029966 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 029990 00000 ------------ C 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 030111 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030223 00000 ------------ A 0.72 1.00 0.87 G 0.28 0.00 0.13 0000 --- --- --- --- 030238 00000 ------------ T 0.68 1.00 0.85 C 0.33 0.00 0.15 0000 --- --- --- --- 030262 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 030281 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 030293 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 030311 00000 ------------ A 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 030313 00000 ------------ C 0.93 0.43 0.66 A 0.07 0.57 0.34 0000 --- --- --- --- 030323 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 030343 00000 ------------ A 0.68 1.00 0.85 G 0.33 0.00 0.15 0000 --- --- --- --- 030347 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 030348 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 030369 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030385 00000 ------------ A 0.72 1.00 0.87 G 0.28 0.00 0.13 0000 --- --- --- --- 030699 00000 ------------ G 0.88 0.67 0.77 C 0.12 0.33 0.23 0000 --- --- --- --- 030751 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 030864 00000 ------------ A 0.67 1.00 0.83 G 0.33 0.00 0.17 0000 --- --- --- --- 030889 00000 ------------ C 0.46 1.00 0.72 G 0.54 0.00 0.28 0000 --- --- --- --- 030945 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031009 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 031136 00000 ------------ G 1.00 0.82 0.93 A 0.00 0.18 0.07 0000 --- --- --- --- 031142 00000 ------------ - 0.13 0.33 0.23 + 0.87 0.67 0.77 0000 --- --- --- --- 031153 00000 ------------ T 0.87 0.33 0.61 C 0.13 0.67 0.39 0000 --- --- --- --- 031170 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031247 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031284 00000 ------------ A 1.00 0.86 0.93 G 0.00 0.14 0.07 0000 --- --- --- --- 031533 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031616 00000 ------------ - 0.26 0.00 0.13 + 0.74 1.00 0.87 0000 --- --- --- --- 031757 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 031760 00000 ------------ T 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 031912 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 032075 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 032093 00000 ------------ A 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 032095 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 032140 00000 ------------ C 0.87 0.36 0.62 G 0.13 0.64 0.38 0000 --- --- --- --- 032204 00000 ------------ G 0.74 1.00 0.87 A 0.26 0.00 0.13 0000 --- --- --- --- 032392 00000 ------------ G 0.82 0.66 0.74 T 0.18 0.34 0.26 0000 --- --- --- --- 032645 00000 ------------ A 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 033120 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033148 00000 ------------ C 0.58 1.00 0.79 T 0.42 0.00 0.21 0000 --- --- --- --- 033287 00000 ------------ G 0.71 0.98 0.84 A 0.29 0.02 0.16 0000 --- --- --- --- 033356 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033359 00000 ------------ C 0.88 0.22 0.55 T 0.12 0.78 0.45 0000 --- --- --- --- 033571 00000 ------------ C 0.89 0.19 0.55 T 0.11 0.81 0.45 0000 --- --- --- --- 033631 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033735 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 033788 00000 ------------ A 0.86 0.19 0.53 G 0.14 0.81 0.47 0000 --- --- --- --- 033861 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 033892 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 033914 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 034268 00000 ------------ A 0.65 1.00 0.82 G 0.35 0.00 0.18 0000 --- --- --- --- 034544 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034600 00000 ------------ T 0.83 0.80 0.82 G 0.17 0.20 0.18 0000 --- --- --- --- 034783 00000 ------------ A 0.88 0.22 0.55 T 0.12 0.78 0.45 0000 --- --- --- --- 034791 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 034826 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 034850 00000 ------------ T 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 035010 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000987: T 010961: C 013224: GAGA 022522: CAGGCGTGGTAGC 023495: T 023754: AA 026523: TGTCCTCTTCTGCTG 027855: C 028205: T 031142: C 031616: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 007060 C 0.19 0.65 0.41 G 0.33 0.02 0.18 T 0.48 0.33 0.40 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000180 00000 ------------ T 0.75 0.32 0.55 A 0.25 0.68 0.45 0000 --- --- --- --- 000706 00000 ------------ T 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 000809 00000 ------------ T 0.98 0.56 0.78 A 0.02 0.44 0.22 0000 --- --- --- --- 000902 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001255 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001271 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001300 00000 ------------ T 0.96 0.89 0.93 C 0.04 0.11 0.07 0000 --- --- --- --- 001575 00145 SYNON T 0.79 1.00 0.89 C 0.21 0.00 0.11 0037 GAT GAC ASP(D) ASP(D) 001622 00192 NON-SYN G 0.94 0.89 0.91 A 0.06 0.11 0.09 0053 GGG GAG GLY(G) GLU(E) 002704 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003589 00000 ------------ T 0.82 1.00 0.91 C 0.18 0.00 0.09 0000 --- --- --- --- 004137 00000 ------------ G 0.70 1.00 0.85 T 0.30 0.00 0.15 0000 --- --- --- --- 004589 00964 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0310 GTC GTT VAL(V) VAL(V) 005092 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005333 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 005621 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006077 00000 ------------ - 0.98 0.89 0.94 + 0.02 0.11 0.06 0000 --- --- --- --- 006084 00000 ------------ T 0.96 0.88 0.92 G 0.04 0.12 0.08 0000 --- --- --- --- 006243 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005621: T 006077: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000120 00000 ------------ C 0.65 0.95 0.80 T 0.35 0.05 0.20 0000 --- --- --- --- 000394 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 000964 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001762 00000 ------------ A 0.92 0.76 0.84 G 0.08 0.24 0.16 0000 --- --- --- --- 001800 00000 ------------ A 0.85 0.98 0.91 G 0.15 0.02 0.09 0000 --- --- --- --- 002019 00000 ------------ T 0.92 0.76 0.84 C 0.08 0.24 0.16 0000 --- --- --- --- 002536 00000 ------------ T 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 002880 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003305 -----** SYNON A 1.00 0.93 0.97 T 0.00 0.07 0.03 0117 GTA GTT VAL(V) VAL(V) 003341 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 003917 00000 ------------ G 0.92 0.77 0.85 A 0.08 0.23 0.15 0000 --- --- --- --- 004058 00000 ------------ + 0.98 0.84 0.91 - 0.02 0.16 0.09 0000 --- --- --- --- 004146 00000 ------------ C 0.69 0.60 0.64 G 0.31 0.40 0.36 0000 --- --- --- --- 004644 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 004670 00000 ------------ A 0.64 0.95 0.79 T 0.36 0.05 0.21 0000 --- --- --- --- 004769 00000 ------------ T 0.82 0.98 0.90 C 0.18 0.02 0.10 0000 --- --- --- --- 004789 00000 ------------ A 0.82 0.98 0.90 G 0.18 0.02 0.10 0000 --- --- --- --- 004961 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 005053 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 005154 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 005416 00000 ------------ A 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 005418 00000 ------------ T 0.75 0.96 0.85 C 0.25 0.04 0.15 0000 --- --- --- --- 005484 00000 ------------ A 0.90 0.77 0.83 G 0.10 0.23 0.17 0000 --- --- --- --- 005543 00000 ------------ G 0.66 0.61 0.63 A 0.34 0.39 0.37 0000 --- --- --- --- 006121 00000 ------------ + 0.00 0.02 0.01 - 1.00 0.98 0.99 0000 --- --- --- --- 006144 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006392 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 006432 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006547 00000 ------------ C 0.73 0.66 0.70 G 0.27 0.34 0.30 0000 --- --- --- --- 006590 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006593 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006723 00000 ------------ C 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 007470 -----** NON-SYN G 0.98 0.98 0.98 A 0.02 0.02 0.02 0226 AGG AAG ARG(R) LYS(K) 008111 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008246 00000 ------------ A 0.74 0.74 0.74 G 0.26 0.26 0.26 0000 --- --- --- --- 008562 00000 ------------ C 0.75 0.96 0.85 G 0.25 0.04 0.15 0000 --- --- --- --- 008947 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004058: GCAAGG 004961: GAT 005053: C 005154: ATC 006121: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000167 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000543 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 000748 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001059 00000 ------------ A 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 001150 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001204 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 002046 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002351 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002377 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002817 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 002843 00000 ------------ - 0.58 0.46 0.52 + 0.42 0.54 0.48 0000 --- --- --- --- 003959 00000 ------------ A 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 005181 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 005230 00000 ------------ A 0.58 1.00 0.79 G 0.42 0.00 0.21 0000 --- --- --- --- 005704 00000 ------------ C 0.62 1.00 0.81 T 0.38 0.00 0.19 0000 --- --- --- --- 005705 00000 ------------ T 0.62 1.00 0.81 C 0.38 0.00 0.19 0000 --- --- --- --- 006174 00000 ------------ T 0.65 1.00 0.82 C 0.35 0.00 0.18 0000 --- --- --- --- 006307 00000 ------------ A 0.65 1.00 0.82 T 0.35 0.00 0.18 0000 --- --- --- --- 006369 00000 ------------ T 0.65 1.00 0.82 C 0.35 0.00 0.18 0000 --- --- --- --- 006425 00000 ------------ A 0.65 1.00 0.83 G 0.35 0.00 0.17 0000 --- --- --- --- 006723 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 007130 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007687 00000 ------------ T 0.52 1.00 0.74 C 0.48 0.00 0.26 0000 --- --- --- --- 007785 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007911 00000 ------------ A 0.62 1.00 0.80 G 0.38 0.00 0.20 0000 --- --- --- --- 007918 00000 ------------ G 0.62 1.00 0.80 A 0.38 0.00 0.20 0000 --- --- --- --- 007934 00000 ------------ C 0.62 1.00 0.80 T 0.38 0.00 0.20 0000 --- --- --- --- 007966 00000 ------------ A 0.52 1.00 0.74 G 0.48 0.00 0.26 0000 --- --- --- --- 008319 00000 ------------ G 0.62 1.00 0.81 A 0.38 0.00 0.19 0000 --- --- --- --- 008382 00000 ------------ G 0.62 1.00 0.81 T 0.38 0.00 0.19 0000 --- --- --- --- 008554 00000 ------------ G 0.62 1.00 0.81 A 0.38 0.00 0.19 0000 --- --- --- --- 008730 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008767 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008781 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008867 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 008961 00000 ------------ C 0.62 1.00 0.81 T 0.38 0.00 0.19 0000 --- --- --- --- 009028 00000 ------------ - 0.62 1.00 0.81 + 0.38 0.00 0.19 0000 --- --- --- --- 009224 00000 ------------ G 0.50 1.00 0.74 A 0.50 0.00 0.26 0000 --- --- --- --- 009341 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009350 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 009566 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 009634 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009849 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009890 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 009972 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 010120 00000 ------------ G 0.58 0.46 0.52 A 0.42 0.54 0.48 0000 --- --- --- --- 010177 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 010266 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 010408 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 010525 00051 5' UTR T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010544 00070 SYNON G 0.90 1.00 0.95 A 0.10 0.00 0.05 0004 CCG CCA PRO(P) PRO(P) 010674 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010687 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 010905 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011328 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 012061 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 013013 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013509 00379 SYNON T 0.79 1.00 0.89 C 0.21 0.00 0.11 0107 GCT GCC ALA(A) ALA(A) 013884 00000 ------------ A 0.62 1.00 0.80 T 0.38 0.00 0.20 0000 --- --- --- --- 014248 00494 NON-SYN G 1.00 0.97 0.99 A 0.00 0.03 0.01 0146 GTG ATG VAL(V) MET(M) 014408 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 014829 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 014839 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014904 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 014960 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 015022 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015932 00000 ------------ A 1.00 0.92 0.96 G 0.00 0.08 0.04 0000 --- --- --- --- 015952 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 016049 00000 ------------ G 0.71 0.60 0.66 C 0.29 0.40 0.34 0000 --- --- --- --- 016286 00817 SYNON G 0.89 1.00 0.94 A 0.11 0.00 0.06 0253 TTG TTA LEU(L) LEU(L) 016415 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017179 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 017406 00000 ------------ C 0.58 0.46 0.52 G 0.42 0.54 0.48 0000 --- --- --- --- 017480 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017744 01102 SYNON C 1.00 0.98 0.99 G 0.00 0.02 0.01 0348 GCC GCG ALA(A) ALA(A) 017939 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018280 00000 ------------ - 0.11 0.00 0.05 + 0.89 1.00 0.95 0000 --- --- --- --- 018324 01138 SYNON T 0.76 1.00 0.88 C 0.24 0.00 0.12 0360 CTT CTC LEU(L) LEU(L) 018835 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 019350 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 019822 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 019996 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 020191 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 020237 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020346 01486 SYNON C 0.71 0.57 0.64 T 0.29 0.43 0.36 0476 CCC CCT PRO(P) PRO(P) 020479 01619 NON-SYN G 0.88 1.00 0.94 A 0.12 0.00 0.06 0521 GCC ACC ALA(A) THR(T) 020630 01770 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0571 CGC CAC ARG(R) HIS(H) 020733 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 021281 00000 ------------ G 0.74 1.00 0.87 T 0.26 0.00 0.13 0000 --- --- --- --- 021297 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 021788 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 021983 02160 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0701 CCG CTG PRO(P) LEU(L) 021984 02161 SYNON G 0.90 1.00 0.95 A 0.10 0.00 0.05 0701 CCG CCA PRO(P) PRO(P) 023040 02630 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0858 GCA ACA ALA(A) THR(T) 023049 02639 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0861 GTG ATG VAL(V) MET(M) 023306 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 023384 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 023438 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 023493 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 023530 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023596 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 023634 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023980 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024587 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024728 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024819 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 024965 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 025017 00000 ------------ A 0.62 1.00 0.81 G 0.38 0.00 0.19 0000 --- --- --- --- 025582 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 025630 02716 SYNON C 0.81 1.00 0.90 T 0.19 0.00 0.10 0886 GAC GAT ASP(D) ASP(D) 025673 02759 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0901 CGG TGG ARG(R) TRP(W) 025787 02873 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0939 CGG TGG ARG(R) TRP(W) 025788 02874 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0939 CGG CAG ARG(R) GLN(Q) 025868 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026395 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 026449 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 026749 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026811 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 026823 00000 ------------ C 0.83 0.74 0.79 G 0.17 0.26 0.21 0000 --- --- --- --- 027779 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027821 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028030 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028267 00000 ------------ C 0.43 0.61 0.52 A 0.57 0.39 0.48 0000 --- --- --- --- 028502 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 028794 00000 ------------ C 0.59 0.48 0.53 T 0.41 0.52 0.47 0000 --- --- --- --- 029039 00000 ------------ G 0.71 0.66 0.68 T 0.29 0.34 0.32 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000543: GCCACCACGCTCAGCTAATTTTTGTATTTTTAGTAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTTCAACTCCCGACCTCATGATCCACCCGCCTCGGCCTCA 002817: G 002843: CAA 009028: G 018280: CCC 020733: A 021297: TGATCTCTG 023493: TG Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000605 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000706 00000 ------------ A 0.94 0.91 0.93 C 0.06 0.09 0.07 0000 --- --- --- --- 001260 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 001384 00000 ------------ C 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 001386 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001395 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001459 00000 ------------ A 0.32 0.88 0.58 G 0.68 0.12 0.42 0000 --- --- --- --- 001617 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 002021 00022 5' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002125 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 002319 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 002892 00000 ------------ G 0.67 0.56 0.62 A 0.33 0.44 0.38 0000 --- --- --- --- 003274 00000 ------------ T 0.89 0.29 0.64 A 0.11 0.71 0.36 0000 --- --- --- --- 003343 00138 NON-SYN C 1.00 0.97 0.99 T 0.00 0.03 0.01 0012 GCC GTC ALA(A) VAL(V) 004458 01253 3' UTR G 0.50 0.91 0.70 A 0.50 0.09 0.30 0000 --- --- --- --- 004586 01381 3' UTR T 0.50 0.87 0.68 C 0.50 0.13 0.32 0000 --- --- --- --- 004796 01591 3' UTR G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 004858 01653 3' UTR G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 005149 01944 3' UTR G 0.50 0.87 0.68 A 0.50 0.13 0.32 0000 --- --- --- --- 005168 01963 3' UTR A 0.76 0.74 0.75 G 0.24 0.26 0.25 0000 --- --- --- --- 005263 02058 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005271 02066 3' UTR T 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 005272 02067 3' UTR T 0.37 0.70 0.53 A 0.63 0.30 0.47 0000 --- --- --- --- 005273 02068 3' UTR - 0.22 0.75 0.47 + 0.78 0.25 0.53 0000 --- --- --- --- 005298 02093 3' UTR - 0.50 0.87 0.68 + 0.50 0.13 0.32 0000 --- --- --- --- 005614 02409 3' UTR G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 005700 02495 3' UTR T 0.50 0.87 0.68 C 0.50 0.13 0.32 0000 --- --- --- --- 006096 02891 3' UTR C 0.50 0.98 0.73 T 0.50 0.02 0.27 0000 --- --- --- --- 007179 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 007194 00000 ------------ G 0.63 0.63 0.63 C 0.37 0.37 0.37 0000 --- --- --- --- 007218 00000 ------------ C 0.78 0.63 0.71 T 0.22 0.37 0.29 0000 --- --- --- --- 007251 00000 ------------ - 0.22 0.00 0.11 + 0.78 1.00 0.89 0000 --- --- --- --- 007313 00000 ------------ T 0.61 0.63 0.62 C 0.39 0.37 0.38 0000 --- --- --- --- 007612 00000 ------------ A 0.68 0.39 0.52 G 0.33 0.61 0.48 0000 --- --- --- --- 007654 00000 ------------ A 0.61 0.63 0.62 G 0.39 0.37 0.38 0000 --- --- --- --- 007963 00000 ------------ C 0.67 0.63 0.65 T 0.33 0.37 0.35 0000 --- --- --- --- 008037 00000 ------------ G 0.67 0.63 0.65 T 0.33 0.37 0.35 0000 --- --- --- --- 008056 00000 ------------ G 0.67 0.63 0.65 A 0.33 0.37 0.35 0000 --- --- --- --- 008153 00000 ------------ G 0.79 0.67 0.73 A 0.21 0.33 0.27 0000 --- --- --- --- 008188 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008303 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005273: A 005298: TTTT 007251: GCGGAGG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 002296 00000 ------------ A 0.33 0.79 0.56 G 0.68 0.21 0.44 0000 --- --- --- --- 002440 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002561 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002644 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002769 00000 ------------ C 0.93 0.91 0.92 G 0.07 0.09 0.08 0000 --- --- --- --- 002887 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 002971 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 004541 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 005308 00000 ------------ T 0.50 0.89 0.69 C 0.50 0.11 0.31 0000 --- --- --- --- 005360 00000 ------------ C 0.94 0.89 0.91 G 0.06 0.11 0.09 0000 --- --- --- --- 007409 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007415 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 007535 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007617 00000 ------------ G 0.50 0.93 0.72 A 0.50 0.07 0.28 0000 --- --- --- --- 007701 00000 ------------ T 0.55 1.00 0.78 G 0.45 0.00 0.22 0000 --- --- --- --- 007722 00000 ------------ A 0.50 0.93 0.72 G 0.50 0.07 0.28 0000 --- --- --- --- 007787 00000 ------------ C 0.50 0.93 0.72 T 0.50 0.07 0.28 0000 --- --- --- --- 007913 00000 ------------ G 0.48 0.91 0.70 A 0.52 0.09 0.30 0000 --- --- --- --- 008334 00000 ------------ - 0.26 0.07 0.17 + 0.74 0.93 0.83 0000 --- --- --- --- 008354 00000 ------------ G 0.53 0.93 0.74 C 0.47 0.07 0.26 0000 --- --- --- --- 008612 00000 ------------ T 0.81 1.00 0.94 C 0.19 0.00 0.06 0000 --- --- --- --- 009267 00000 ------------ - 0.79 1.00 0.90 + 0.21 0.00 0.10 0000 --- --- --- --- 009584 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009723 00000 ------------ T 0.50 1.00 0.75 C 0.50 0.00 0.25 0000 --- --- --- --- 009732 00000 ------------ A 0.50 1.00 0.75 G 0.50 0.00 0.25 0000 --- --- --- --- 009740 00000 ------------ C 0.50 1.00 0.75 A 0.50 0.00 0.25 0000 --- --- --- --- 009821 00000 ------------ T 0.50 1.00 0.74 C 0.50 0.00 0.26 0000 --- --- --- --- 009952 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010138 00000 ------------ C 0.52 1.00 0.76 A 0.48 0.00 0.24 0000 --- --- --- --- 010229 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010287 00000 ------------ C 0.50 1.00 0.74 T 0.50 0.00 0.26 0000 --- --- --- --- 012402 00000 ------------ T 0.48 1.00 0.74 C 0.52 0.00 0.26 0000 --- --- --- --- 012409 00000 ------------ C 0.48 1.00 0.74 A 0.52 0.00 0.26 0000 --- --- --- --- 012434 00000 ------------ - 0.48 1.00 0.73 + 0.52 0.00 0.27 0000 --- --- --- --- 012450 00000 ------------ A 0.46 1.00 0.81 T 0.54 0.00 0.19 0000 --- --- --- --- 012456 00000 ------------ G 0.46 1.00 0.81 A 0.54 0.00 0.19 0000 --- --- --- --- 012487 00000 ------------ C 0.46 1.00 0.80 T 0.54 0.00 0.20 0000 --- --- --- --- 012535 00000 ------------ G 0.46 1.00 0.79 A 0.54 0.00 0.21 0000 --- --- --- --- 012555 00000 ------------ T 0.46 1.00 0.79 A 0.54 0.00 0.21 0000 --- --- --- --- 012556 00000 ------------ T 0.46 1.00 0.79 A 0.54 0.00 0.21 0000 --- --- --- --- 013353 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 013361 00000 ------------ T 0.45 1.00 0.73 A 0.55 0.00 0.27 0000 --- --- --- --- 013369 00000 ------------ A 0.73 1.00 0.87 T 0.27 0.00 0.13 0000 --- --- --- --- 013411 00000 ------------ C 0.48 1.00 0.74 T 0.52 0.00 0.26 0000 --- --- --- --- 013475 00000 ------------ T 0.48 1.00 0.74 C 0.52 0.00 0.26 0000 --- --- --- --- 013479 00000 ------------ C 0.48 0.98 0.73 T 0.52 0.02 0.27 0000 --- --- --- --- 013491 00000 ------------ T 0.45 1.00 0.73 C 0.55 0.00 0.27 0000 --- --- --- --- 013507 00000 ------------ C 0.45 1.00 0.73 T 0.55 0.00 0.27 0000 --- --- --- --- 013508 00000 ------------ G 0.45 1.00 0.73 A 0.55 0.00 0.27 0000 --- --- --- --- 013689 00000 ------------ A 0.46 1.00 0.72 G 0.54 0.00 0.28 0000 --- --- --- --- 015812 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 016191 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016280 00000 ------------ T 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 016303 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016513 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017275 00000 ------------ C 0.80 1.00 0.91 T 0.20 0.00 0.09 0000 --- --- --- --- 017563 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017606 00000 ------------ T 0.48 1.00 0.74 C 0.52 0.00 0.26 0000 --- --- --- --- 017721 00000 ------------ T 0.52 1.00 0.76 G 0.48 0.00 0.24 0000 --- --- --- --- 018032 00000 ------------ T 0.50 1.00 0.75 C 0.50 0.00 0.25 0000 --- --- --- --- 018403 00000 ------------ C 1.00 0.93 0.96 G 0.00 0.07 0.04 0000 --- --- --- --- 018425 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 018514 00000 ------------ C 0.55 1.00 0.78 A 0.45 0.00 0.22 0000 --- --- --- --- 021063 00000 ------------ - 0.64 0.89 0.77 + 0.36 0.11 0.23 0000 --- --- --- --- 021339 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021375 00000 ------------ T 0.69 1.00 0.84 G 0.31 0.00 0.16 0000 --- --- --- --- 021463 00000 ------------ G 0.67 0.89 0.78 A 0.33 0.11 0.22 0000 --- --- --- --- 021521 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023452 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023582 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 024609 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 024712 00000 ------------ G 0.52 0.61 0.57 C 0.48 0.39 0.43 0000 --- --- --- --- 024749 00000 ------------ C 0.52 0.61 0.57 G 0.48 0.39 0.43 0000 --- --- --- --- 024776 00000 ------------ T 0.52 0.61 0.57 C 0.48 0.39 0.43 0000 --- --- --- --- 024890 00184 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0025 ATA GTA ILE(I) VAL(V) 025021 00315 SYNON G 0.55 0.61 0.58 A 0.45 0.39 0.42 0068 GCG GCA ALA(A) ALA(A) 025066 00360 SYNON T 0.55 0.61 0.58 C 0.45 0.39 0.42 0083 TAT TAC TYR(Y) TYR(Y) 025165 00459 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0116 AGC AGT SER(S) SER(S) 025207 00501 SYNON C 0.76 0.65 0.71 T 0.24 0.35 0.29 0130 AAC AAT ASN(N) ASN(N) 025229 00523 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0138 CGC TGC ARG(R) CYS(C) 025278 00572 TRUNCATION G 0.46 0.39 0.42 A 0.54 0.61 0.58 0154 TGG TAG TRP(W) *** 025330 00624 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0171 CAC CAT HIS(H) HIS(H) 025331 00625 NON-SYN G 0.84 1.00 0.92 A 0.16 0.00 0.08 0172 GAC AAC ASP(D) ASN(N) 025589 00883 NON-SYN A 0.54 0.70 0.62 G 0.46 0.30 0.38 0258 AGT GGT SER(S) GLY(G) 025810 01104 SYNON G 0.54 0.70 0.62 A 0.46 0.30 0.38 0331 ACG ACA THR(T) THR(T) 025859 01153 3' UTR G 0.52 0.70 0.61 A 0.48 0.30 0.39 0000 --- --- --- --- 025861 01155 3' UTR C 0.52 0.70 0.61 T 0.48 0.30 0.39 0000 --- --- --- --- 026036 01330 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026158 01452 3' UTR T 0.54 0.67 0.61 C 0.46 0.33 0.39 0000 --- --- --- --- 026243 01537 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 026255 01549 3' UTR C 0.54 0.67 0.61 T 0.46 0.33 0.39 0000 --- --- --- --- 026315 01609 3' UTR C 0.56 0.67 0.62 T 0.44 0.33 0.38 0000 --- --- --- --- 026370 01664 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026389 01683 3' UTR A 0.52 0.67 0.60 G 0.48 0.33 0.40 0000 --- --- --- --- 026637 01931 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026645 01939 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026649 01943 3' UTR G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 026847 02141 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026942 02236 3' UTR - 0.54 0.67 0.61 + 0.46 0.33 0.39 0000 --- --- --- --- 027068 02362 3' UTR G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 027098 02392 3' UTR G 0.55 0.68 0.61 A 0.45 0.32 0.39 0000 --- --- --- --- 027140 02434 3' UTR C 0.55 0.68 0.61 T 0.45 0.32 0.39 0000 --- --- --- --- 027161 02455 3' UTR T 0.55 0.68 0.61 C 0.45 0.32 0.39 0000 --- --- --- --- 027226 02520 3' UTR C 0.55 0.68 0.61 G 0.45 0.32 0.39 0000 --- --- --- --- 027269 02563 3' UTR - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 027338 02632 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 008334: T 009267: CTTTT 012434: AG 013353: A 021063: GTTTT 026942: C 027269: CTCA Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000098 00000 ------------ C 0.52 0.48 0.50 A 0.48 0.52 0.50 0000 --- --- --- --- 000145 00000 ------------ A 0.52 0.82 0.67 G 0.48 0.18 0.33 0000 --- --- --- --- 000176 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 000177 00000 ------------ G 0.86 0.48 0.67 T 0.14 0.52 0.33 0000 --- --- --- --- 000282 00000 ------------ G 0.55 0.66 0.60 T 0.45 0.34 0.40 0000 --- --- --- --- 000346 00000 ------------ - 0.43 0.43 0.43 + 0.57 0.57 0.57 0000 --- --- --- --- 000369 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 000370 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 000416 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000437 00000 ------------ C 0.64 0.71 0.67 T 0.36 0.29 0.33 0000 --- --- --- --- 000474 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000680 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000692 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 000760 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 000921 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 001051 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001078 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001441 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 001491 00000 ------------ C 0.77 0.83 0.80 T 0.23 0.17 0.20 0000 --- --- --- --- 001759 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001826 00017 5' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001925 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001956 00000 ------------ T 0.98 0.57 0.78 C 0.02 0.43 0.22 0000 --- --- --- --- 001991 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002292 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002668 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002795 00000 ------------ G 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 002912 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003069 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 003163 00000 ------------ C 0.98 0.52 0.75 T 0.02 0.48 0.25 0000 --- --- --- --- 003279 00000 ------------ C 0.98 0.52 0.75 A 0.02 0.48 0.25 0000 --- --- --- --- 003577 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 003626 00000 ------------ G 0.60 1.00 0.80 A 0.40 0.00 0.20 0000 --- --- --- --- 004551 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 004774 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004893 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005183 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 005292 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 005493 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 005600 00000 ------------ G 0.92 0.50 0.72 A 0.08 0.50 0.28 0000 --- --- --- --- 005636 00000 ------------ C 0.92 0.50 0.72 T 0.08 0.50 0.28 0000 --- --- --- --- 006096 00000 ------------ G 0.89 0.52 0.71 A 0.11 0.48 0.29 0000 --- --- --- --- 006213 00000 ------------ G 0.90 0.52 0.71 T 0.10 0.48 0.29 0000 --- --- --- --- 006739 00507 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006764 00532 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006777 00545 5' UTR A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 006801 00569 5' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006896 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007651 00000 ------------ G 0.97 0.47 0.74 A 0.03 0.53 0.26 0000 --- --- --- --- 007825 00000 ------------ C 0.93 0.78 0.86 T 0.07 0.22 0.14 0000 --- --- --- --- 007850 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008136 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008458 00648 NON-SYN G 0.81 1.00 0.90 A 0.19 0.00 0.10 0005 GGT AGT GLY(G) SER(S) 008504 00694 NON-SYN T 0.73 1.00 0.86 G 0.27 0.00 0.14 0020 CTG CGG LEU(L) ARG(R) 008506 00696 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0021 CTA TTA LEU(L) LEU(L) 008517 00707 SYNON G 0.98 1.00 0.99 C 0.02 0.00 0.01 0024 CTG CTC LEU(L) LEU(L) 008647 00837 NON-SYN T 0.94 0.78 0.86 C 0.06 0.22 0.14 0068 TGG CGG TRP(W) ARG(R) 008759 00949 NON-SYN C 0.96 0.78 0.87 T 0.04 0.22 0.13 0105 ACG ATG THR(T) MET(M) 008923 01113 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0160 CGC TGC ARG(R) CYS(C) 008929 01119 NON-SYN G 0.80 1.00 0.90 A 0.20 0.00 0.10 0162 GAC AAC ASP(D) ASN(N) 008953 01143 NON-SYN G 0.76 1.00 0.88 A 0.24 0.00 0.12 0170 GGC AGC GLY(G) SER(S) 009057 01247 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0204 TCA TCG SER(S) SER(S) 009112 01302 NON-SYN G 0.80 1.00 0.90 A 0.20 0.00 0.10 0223 GGA AGA GLY(G) ARG(R) 009177 01367 SYNON C 0.93 1.00 0.97 T 0.07 0.00 0.03 0244 TAC TAT TYR(Y) TYR(Y) 009253 01443 NON-SYN G 0.92 1.00 0.96 A 0.08 0.00 0.04 0270 GTG ATG VAL(V) MET(M) 009419 01609 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0325 ACG ATG THR(T) MET(M) 009425 01615 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0327 CGG CAG ARG(R) GLN(Q) 009687 01877 3' UTR A 0.70 0.67 0.69 G 0.30 0.33 0.31 0000 --- --- --- --- 010438 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 010650 00000 ------------ G 0.82 0.98 0.92 A 0.18 0.02 0.08 0000 --- --- --- --- 010978 00000 ------------ A 0.79 0.83 0.81 T 0.21 0.17 0.19 0000 --- --- --- --- 011040 00000 ------------ T 0.78 1.00 0.90 G 0.23 0.00 0.10 0000 --- --- --- --- 011077 00000 ------------ T 0.78 0.59 0.67 A 0.23 0.41 0.33 0000 --- --- --- --- 011128 00000 ------------ G 0.82 0.59 0.70 T 0.17 0.41 0.30 0000 --- --- --- --- 011141 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 011835 00000 ------------ A 0.79 0.57 0.68 G 0.21 0.43 0.32 0000 --- --- --- --- 011941 00000 ------------ C 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000346: A 000921: T 005183: C 010438: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000212 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000242 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000258 00000 ------------ G 0.72 1.00 0.85 T 0.28 0.00 0.15 0000 --- --- --- --- 000642 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000682 00000 ------------ G 0.71 0.78 0.74 A 0.29 0.23 0.26 0000 --- --- --- --- 000898 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 000904 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000991 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001543 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001851 00000 ------------ G 0.83 0.44 0.67 A 0.17 0.56 0.33 0000 --- --- --- --- 001965 00016 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001995 00046 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002042 00093 5' UTR C 0.94 1.00 0.96 T 0.06 0.00 0.04 0000 --- --- --- --- 002044 00095 5' UTR C 0.83 1.00 0.90 T 0.17 0.00 0.10 0000 --- --- --- --- 002053 00104 5' UTR C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 002544 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002668 00000 ------------ G 0.40 0.78 0.59 A 0.60 0.22 0.41 0000 --- --- --- --- 002992 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 003043 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003125 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003203 00000 ------------ C 0.42 0.85 0.63 T 0.58 0.15 0.37 0000 --- --- --- --- 003505 00000 ------------ C 0.42 0.85 0.63 T 0.58 0.15 0.37 0000 --- --- --- --- 003661 00000 ------------ T 0.87 0.85 0.86 C 0.13 0.15 0.14 0000 --- --- --- --- 004113 00000 ------------ G 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 004281 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004307 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 004347 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004532 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004581 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004609 00000 ------------ G 0.42 0.85 0.63 A 0.58 0.15 0.37 0000 --- --- --- --- 004613 00000 ------------ A 0.42 0.85 0.63 T 0.58 0.15 0.37 0000 --- --- --- --- 004614 00000 ------------ T 0.42 0.85 0.63 G 0.58 0.15 0.37 0000 --- --- --- --- 004615 00000 ------------ T 0.42 0.85 0.63 A 0.58 0.15 0.37 0000 --- --- --- --- 004649 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005116 00758 SYNON T 0.89 1.00 0.94 C 0.11 0.00 0.06 0202 CGT CGC ARG(R) ARG(R) 005131 00773 SYNON C 1.00 0.93 0.97 T 0.00 0.07 0.03 0207 GCC GCT ALA(A) ALA(A) 005234 00876 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0242 GGC AGC GLY(G) SER(S) 005353 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005520 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005911 00000 ------------ A 0.81 0.33 0.57 C 0.19 0.67 0.43 0000 --- --- --- --- 006143 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006411 00000 ------------ T 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 006505 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006582 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006756 00000 ------------ G 0.81 0.34 0.59 A 0.19 0.66 0.41 0000 --- --- --- --- 007317 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007536 00000 ------------ T 0.72 0.83 0.77 C 0.28 0.17 0.23 0000 --- --- --- --- 007543 00000 ------------ C 0.65 0.65 0.65 A 0.35 0.35 0.35 0000 --- --- --- --- 007625 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007744 00000 ------------ C 0.68 0.65 0.67 A 0.32 0.35 0.33 0000 --- --- --- --- 007782 00000 ------------ G 0.71 0.65 0.68 A 0.29 0.35 0.32 0000 --- --- --- --- 007936 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008035 00000 ------------ C 0.71 0.65 0.68 G 0.29 0.35 0.32 0000 --- --- --- --- 008098 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008210 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008464 00000 ------------ T 0.71 0.63 0.67 C 0.29 0.37 0.33 0000 --- --- --- --- 008470 00000 ------------ G 0.71 0.63 0.67 C 0.29 0.37 0.33 0000 --- --- --- --- 008485 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 008500 00000 ------------ C 0.71 0.63 0.67 T 0.29 0.37 0.33 0000 --- --- --- --- 008692 00000 ------------ C 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 008833 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009205 00000 ------------ C 0.88 0.36 0.61 T 0.12 0.64 0.39 0000 --- --- --- --- 009292 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009580 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 009642 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009993 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010228 00000 ------------ G 0.77 0.39 0.59 A 0.23 0.61 0.41 0000 --- --- --- --- 010633 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010694 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010836 00000 ------------ G 0.76 0.78 0.77 A 0.24 0.22 0.23 0000 --- --- --- --- 010942 00000 ------------ T 0.53 0.57 0.55 C 0.47 0.43 0.45 0000 --- --- --- --- 010985 00000 ------------ T 0.53 0.57 0.55 C 0.47 0.43 0.45 0000 --- --- --- --- 011184 00000 ------------ C 0.53 0.57 0.55 A 0.47 0.43 0.45 0000 --- --- --- --- 011204 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 011230 00000 ------------ G 0.65 0.40 0.52 C 0.35 0.60 0.48 0000 --- --- --- --- 011387 00000 ------------ - 0.72 0.81 0.77 + 0.28 0.19 0.23 0000 --- --- --- --- 012773 00000 ------------ G 0.62 0.36 0.50 C 0.38 0.64 0.50 0000 --- --- --- --- 012817 00000 ------------ T 0.75 0.83 0.79 G 0.25 0.17 0.21 0000 --- --- --- --- 012865 00000 ------------ T 0.45 0.64 0.54 C 0.55 0.36 0.46 0000 --- --- --- --- 012868 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 013075 00000 ------------ T 0.57 0.78 0.67 C 0.43 0.22 0.33 0000 --- --- --- --- 013295 00000 ------------ A 0.74 0.78 0.76 T 0.26 0.22 0.24 0000 --- --- --- --- 013731 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013757 00000 ------------ C 0.60 0.80 0.70 G 0.40 0.20 0.30 0000 --- --- --- --- 013921 00000 ------------ C 0.88 0.88 0.88 T 0.12 0.12 0.12 0000 --- --- --- --- 013992 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014004 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 014059 00000 ------------ T 0.62 0.45 0.54 G 0.38 0.55 0.46 0000 --- --- --- --- 014066 00000 ------------ C 0.90 0.85 0.88 A 0.10 0.15 0.12 0000 --- --- --- --- 014098 00000 ------------ T 0.88 0.85 0.87 G 0.12 0.15 0.13 0000 --- --- --- --- 014147 00000 ------------ - 0.74 0.85 0.79 + 0.26 0.15 0.21 0000 --- --- --- --- 014309 00000 ------------ - 0.69 0.78 0.73 + 0.31 0.22 0.27 0000 --- --- --- --- 014317 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014385 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014508 00000 ------------ T 0.71 0.80 0.76 C 0.29 0.20 0.24 0000 --- --- --- --- 014550 00000 ------------ T 0.90 0.80 0.85 G 0.10 0.20 0.15 0000 --- --- --- --- 014627 00000 ------------ - 0.85 0.78 0.82 + 0.15 0.22 0.18 0000 --- --- --- --- 015140 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 015423 00000 ------------ G 0.85 0.78 0.82 A 0.15 0.22 0.18 0000 --- --- --- --- 015470 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 015653 00000 ------------ C 0.74 0.78 0.76 T 0.26 0.22 0.24 0000 --- --- --- --- 015894 00000 ------------ T 0.62 0.78 0.70 C 0.38 0.22 0.30 0000 --- --- --- --- 016106 00000 ------------ C 0.72 0.78 0.75 T 0.28 0.22 0.25 0000 --- --- --- --- 016217 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016597 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 016628 00000 ------------ C 0.63 0.78 0.71 T 0.37 0.22 0.29 0000 --- --- --- --- 016727 00000 ------------ C 0.87 0.96 0.91 T 0.13 0.04 0.09 0000 --- --- --- --- 016800 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 016828 00000 ------------ - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 017101 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 017416 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 017471 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017565 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 017598 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 018286 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018591 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018806 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018833 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018873 00000 ------------ A 0.89 0.43 0.67 G 0.11 0.57 0.33 0000 --- --- --- --- 018899 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 019052 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 019361 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 019407 00000 ------------ A 0.84 0.78 0.81 G 0.16 0.23 0.19 0000 --- --- --- --- 019517 00000 ------------ C 0.82 1.00 0.91 T 0.18 0.00 0.09 0000 --- --- --- --- 019847 00000 ------------ C 0.88 0.45 0.67 A 0.12 0.55 0.33 0000 --- --- --- --- 019966 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020393 01406 SYNON G 0.98 0.96 0.97 A 0.02 0.04 0.03 0418 ACG ACA THR(T) THR(T) 020564 01577 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020988 02001 3' UTR A 0.89 0.80 0.84 G 0.11 0.20 0.16 0000 --- --- --- --- 021083 02096 3' UTR A 0.63 0.80 0.71 G 0.37 0.20 0.29 0000 --- --- --- --- 021537 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002992: C 004649: A 011387: AAC 014147: T 014309: AACAAAA 014627: A 016828: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000938 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000954 00000 ------------ C 0.86 0.69 0.78 T 0.14 0.31 0.22 0000 --- --- --- --- 001047 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001152 00000 ------------ G 0.71 0.89 0.81 A 0.29 0.11 0.19 0000 --- --- --- --- 001258 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001555 00000 ------------ G 0.89 0.89 0.89 A 0.11 0.11 0.11 0000 --- --- --- --- 001690 00000 ------------ G 0.63 0.57 0.60 C 0.37 0.43 0.40 0000 --- --- --- --- 001888 00102 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001974 00000 ------------ C 0.88 0.91 0.89 G 0.12 0.09 0.11 0000 --- --- --- --- 002154 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002157 00000 ------------ A 0.79 0.93 0.86 G 0.21 0.07 0.14 0000 --- --- --- --- 002328 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002425 00000 ------------ G 0.82 0.95 0.89 C 0.18 0.05 0.11 0000 --- --- --- --- 002570 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 003058 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003068 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003117 00000 ------------ A 0.76 0.93 0.85 G 0.24 0.07 0.15 0000 --- --- --- --- 003150 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 003233 00226 5' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003243 00236 5' UTR A 0.89 0.96 0.93 G 0.11 0.04 0.07 0000 --- --- --- --- 003346 00339 NON-SYN C 0.83 0.95 0.89 T 0.17 0.05 0.11 0020 CTC TTC LEU(L) PHE(F) 003349 00342 NON-SYN A 0.95 1.00 0.98 G 0.05 0.00 0.02 0021 AGT GGT SER(S) GLY(G) 003374 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003927 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004136 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004152 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 004160 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004781 00000 ------------ G 0.84 0.95 0.89 C 0.16 0.05 0.11 0000 --- --- --- --- 004973 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005391 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006317 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 006406 00000 ------------ A 0.82 0.65 0.73 G 0.17 0.35 0.27 0000 --- --- --- --- 006656 00000 ------------ A 0.93 0.98 0.95 G 0.07 0.02 0.05 0000 --- --- --- --- 006750 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006795 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006865 00000 ------------ C 0.91 0.98 0.95 T 0.09 0.02 0.05 0000 --- --- --- --- 008008 00000 ------------ C 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 008012 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 008308 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 008367 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008390 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008417 00000 ------------ A 0.79 0.91 0.85 T 0.21 0.09 0.15 0000 --- --- --- --- 008486 00000 ------------ A 0.90 0.67 0.79 G 0.10 0.33 0.21 0000 --- --- --- --- 008501 00000 ------------ G 0.65 0.85 0.74 A 0.35 0.15 0.26 0000 --- --- --- --- 008588 00000 ------------ T 0.85 0.67 0.77 C 0.15 0.33 0.23 0000 --- --- --- --- 008659 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009116 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009170 00000 ------------ C 0.91 0.70 0.80 T 0.09 0.30 0.20 0000 --- --- --- --- 009172 00000 ------------ C 0.82 0.91 0.87 T 0.18 0.09 0.13 0000 --- --- --- --- 009180 00000 ------------ C 0.77 0.46 0.61 T 0.23 0.54 0.39 0000 --- --- --- --- 009271 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 009274 00000 ------------ C 0.73 0.91 0.82 A 0.27 0.09 0.18 0000 --- --- --- --- 009299 00000 ------------ G 0.70 0.91 0.81 A 0.30 0.09 0.19 0000 --- --- --- --- 009337 00000 ------------ A 0.77 0.46 0.61 C 0.23 0.54 0.39 0000 --- --- --- --- 009517 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009538 00000 ------------ T 0.89 0.95 0.93 A 0.11 0.05 0.07 0000 --- --- --- --- 009586 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 009718 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009742 00000 ------------ C 0.78 0.46 0.62 T 0.22 0.54 0.38 0000 --- --- --- --- 010142 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010168 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 010205 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 010400 00517 NON-SYN T 0.94 1.00 0.97 C 0.06 0.00 0.03 0079 CTG CCG LEU(L) PRO(P) 010515 00632 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0117 GCC GCT ALA(A) ALA(A) 010544 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010592 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010630 00000 ------------ A 0.82 0.95 0.89 G 0.18 0.05 0.11 0000 --- --- --- --- 010781 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011443 00644 TRUNCATION C 0.92 0.89 0.90 A 0.08 0.11 0.10 0121 TAC TAA TYR(Y) *** 011567 00768 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0163 CGG TGG ARG(R) TRP(W) 011614 00815 SYNON G 0.73 1.00 0.86 A 0.27 0.00 0.14 0178 GAG GAA GLU(E) GLU(E) 011678 00879 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0200 GAC AAC ASP(D) ASN(N) 011776 00977 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0232 TAC TAT TYR(Y) TYR(Y) 011793 00994 NON-SYN A 0.96 1.00 0.98 C 0.04 0.00 0.02 0238 CAG CCG GLN(Q) PRO(P) 011823 01024 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0248 ACT ATT THR(T) ILE(I) 011950 01151 SYNON C 0.97 0.89 0.92 T 0.03 0.11 0.08 0290 GGC GGT GLY(G) GLY(G) 011951 01152 NON-SYN A 0.94 1.00 0.97 T 0.06 0.00 0.03 0291 ATC TTC ILE(I) PHE(F) 012218 01419 3' UTR - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 012329 01530 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 012383 01584 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 012632 01833 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 012636 01837 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 013115 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 013221 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 013243 00000 ------------ A 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 013326 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 013666 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013775 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004160: T 009586: TC 012218: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000045 00000 ------------ G 0.90 0.65 0.78 T 0.10 0.35 0.22 0000 --- --- --- --- 000145 00000 ------------ G 0.94 0.95 0.95 T 0.06 0.05 0.05 0000 --- --- --- --- 000255 00000 ------------ G 0.90 0.61 0.76 C 0.10 0.39 0.24 0000 --- --- --- --- 000390 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 000951 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001053 00000 ------------ C 0.56 0.46 0.51 T 0.44 0.54 0.49 0000 --- --- --- --- 001131 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001152 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001529 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001688 00000 ------------ A 0.92 0.62 0.74 T 0.08 0.38 0.26 0000 --- --- --- --- 001731 00038 5' UTR T 0.75 0.86 0.81 C 0.25 0.14 0.19 0000 --- --- --- --- 002217 00524 NON-SYN C 0.83 0.98 0.90 T 0.17 0.02 0.10 0161 ACG ATG THR(T) MET(M) 002218 00525 SYNON G 0.96 1.00 0.98 A 0.04 0.00 0.02 0161 ACG ACA THR(T) THR(T) 002509 00816 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0258 AAC AAT ASN(N) ASN(N) 002809 01116 SYNON A 0.93 1.00 0.97 G 0.07 0.00 0.03 0358 AGA AGG ARG(R) ARG(R) 004067 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004157 00000 ------------ G 0.91 0.61 0.77 A 0.09 0.39 0.23 0000 --- --- --- --- 004353 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004401 00000 ------------ G 0.93 0.93 0.93 C 0.07 0.07 0.07 0000 --- --- --- --- 004448 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 004479 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004562 00000 ------------ C 0.79 0.89 0.84 T 0.21 0.11 0.16 0000 --- --- --- --- 004793 00000 ------------ C 0.77 0.89 0.83 T 0.23 0.11 0.17 0000 --- --- --- --- 004882 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004909 00000 ------------ C 0.63 0.57 0.60 T 0.37 0.43 0.40 0000 --- --- --- --- 005160 00000 ------------ C 0.83 0.95 0.90 G 0.17 0.05 0.10 0000 --- --- --- --- 005249 00000 ------------ A 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 005272 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005277 00000 ------------ T 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 005587 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 005690 00000 ------------ G 0.91 0.63 0.77 A 0.09 0.37 0.23 0000 --- --- --- --- 006137 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004448: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000103 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000154 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000866 00000 ------------ G 0.62 0.93 0.78 A 0.38 0.07 0.22 0000 --- --- --- --- 000893 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000919 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001273 00000 ------------ - 0.23 0.07 0.14 + 0.77 0.93 0.86 0000 --- --- --- --- 001280 00000 ------------ A 0.73 0.57 0.65 G 0.27 0.43 0.35 0000 --- --- --- --- 001396 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 001720 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002372 00372 NON-SYN C 0.97 1.00 0.99 G 0.03 0.00 0.01 0043 CAC CAG HIS(H) GLN(Q) 003000 01000 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0253 GAT CAT ASP(D) HIS(H) 003392 01392 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003561 01561 3' UTR A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003625 01625 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003894 01894 3' UTR C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 004390 02390 3' UTR T 0.66 0.61 0.63 C 0.34 0.39 0.37 0000 --- --- --- --- 004894 02894 3' UTR C 0.52 0.62 0.57 T 0.48 0.38 0.43 0000 --- --- --- --- 005007 00000 ------------ A 0.84 0.47 0.67 C 0.16 0.53 0.33 0000 --- --- --- --- 005022 00000 ------------ G 0.67 0.45 0.57 C 0.33 0.55 0.43 0000 --- --- --- --- 005729 00000 ------------ T 0.86 0.47 0.68 C 0.14 0.53 0.32 0000 --- --- --- --- 005803 03016 3' UTR G 0.62 0.75 0.68 A 0.38 0.25 0.32 0000 --- --- --- --- 006190 03403 3' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006373 03586 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 006387 03600 3' UTR T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006561 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 007835 00000 ------------ A 0.62 0.82 0.72 T 0.38 0.17 0.28 0000 --- --- --- --- 007971 00000 ------------ G 0.65 0.82 0.73 A 0.35 0.17 0.27 0000 --- --- --- --- 007981 00000 ------------ G 0.75 1.00 0.86 A 0.25 0.00 0.14 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001273: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000056 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000077 00000 ------------ A 0.62 0.43 0.52 G 0.38 0.57 0.48 0000 --- --- --- --- 000168 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000743 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000877 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 001184 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001269 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 001271 00000 ------------ T 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 001359 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001497 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001920 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001965 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 001999 00000 ------------ G 0.46 0.59 0.52 A 0.54 0.41 0.48 0000 --- --- --- --- 002598 00000 ------------ C 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 002813 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 002984 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003160 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003457 00000 ------------ G 0.73 0.43 0.59 C 0.27 0.57 0.41 0000 --- --- --- --- 003525 00000 ------------ C 0.60 0.41 0.51 T 0.40 0.59 0.49 0000 --- --- --- --- 003667 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 003910 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004216 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004328 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 004357 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004443 00000 ------------ C 0.72 0.98 0.85 T 0.28 0.02 0.15 0000 --- --- --- --- 005201 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005568 00000 ------------ - 0.70 0.45 0.58 + 0.30 0.55 0.42 0000 --- --- --- --- 005778 00000 ------------ G 0.70 0.59 0.64 A 0.30 0.41 0.36 0000 --- --- --- --- 005918 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 005964 00000 ------------ C 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 006425 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006486 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006688 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006853 00000 ------------ C 0.73 0.45 0.60 T 0.27 0.55 0.40 0000 --- --- --- --- 007325 00000 ------------ T 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 007703 00000 ------------ C 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 007971 00000 ------------ C 0.55 0.59 0.57 T 0.45 0.41 0.43 0000 --- --- --- --- 008110 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008304 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008448 00000 ------------ G 0.66 0.43 0.54 T 0.34 0.57 0.46 0000 --- --- --- --- 008484 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 008529 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008765 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009077 00000 ------------ C 0.89 0.98 0.93 A 0.11 0.02 0.07 0000 --- --- --- --- 009094 00000 ------------ A 0.70 0.41 0.55 G 0.30 0.59 0.45 0000 --- --- --- --- 009248 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009249 00000 ------------ G 0.87 0.98 0.92 A 0.13 0.02 0.08 0000 --- --- --- --- 009292 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009694 00000 ------------ T 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 009797 00000 ------------ G 0.72 0.35 0.55 A 0.28 0.65 0.45 0000 --- --- --- --- 009811 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009875 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010081 00000 ------------ T 0.78 0.70 0.74 G 0.22 0.30 0.26 0000 --- --- --- --- 010257 00000 ------------ G 0.72 0.39 0.55 C 0.28 0.61 0.45 0000 --- --- --- --- 010567 00000 ------------ G 0.41 0.63 0.52 A 0.59 0.37 0.48 0000 --- --- --- --- 010756 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010904 00000 ------------ A 0.96 0.89 0.93 G 0.04 0.11 0.07 0000 --- --- --- --- 011051 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011439 00000 ------------ G 0.38 0.68 0.54 A 0.62 0.32 0.46 0000 --- --- --- --- 011697 00000 ------------ - 0.67 0.91 0.78 + 0.33 0.09 0.22 0000 --- --- --- --- 011778 00000 ------------ T 0.67 0.91 0.78 C 0.33 0.09 0.22 0000 --- --- --- --- 011866 00000 ------------ G 0.86 0.75 0.80 A 0.14 0.25 0.20 0000 --- --- --- --- 011874 00000 ------------ G 0.87 0.91 0.89 C 0.13 0.09 0.11 0000 --- --- --- --- 011934 00000 ------------ G 0.80 0.72 0.76 T 0.20 0.28 0.24 0000 --- --- --- --- 011943 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 011972 00000 ------------ C 0.67 0.91 0.79 T 0.33 0.09 0.21 0000 --- --- --- --- 012909 00000 ------------ T 0.88 0.57 0.72 C 0.12 0.43 0.28 0000 --- --- --- --- 013005 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013257 00000 ------------ C 0.92 0.57 0.74 T 0.08 0.43 0.26 0000 --- --- --- --- 013407 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 013434 00000 ------------ C 0.85 0.91 0.88 T 0.15 0.09 0.12 0000 --- --- --- --- 013717 00000 ------------ T 0.67 0.37 0.54 C 0.33 0.63 0.46 0000 --- --- --- --- 013834 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 013889 00000 ------------ A 0.85 0.63 0.75 C 0.15 0.37 0.25 0000 --- --- --- --- 014543 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014558 00000 ------------ T 0.95 0.65 0.80 C 0.05 0.35 0.20 0000 --- --- --- --- 014902 00000 ------------ C 0.75 0.82 0.78 T 0.25 0.18 0.22 0000 --- --- --- --- 015100 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 015104 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015207 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015208 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015209 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015210 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015211 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015212 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015539 00000 ------------ T 0.94 0.65 0.80 C 0.06 0.35 0.20 0000 --- --- --- --- 015565 00000 ------------ C 0.87 0.59 0.73 T 0.13 0.41 0.27 0000 --- --- --- --- 015622 00000 ------------ C 0.83 0.72 0.77 A 0.17 0.28 0.23 0000 --- --- --- --- 015690 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015751 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015786 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015847 00000 ------------ G 0.31 0.70 0.50 T 0.69 0.30 0.50 0000 --- --- --- --- 015893 00000 ------------ G 0.88 0.50 0.69 A 0.12 0.50 0.31 0000 --- --- --- --- 016157 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016165 00000 ------------ G 0.94 0.57 0.76 A 0.06 0.43 0.24 0000 --- --- --- --- 016248 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 016275 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016381 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016541 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 016542 00000 ------------ G 0.94 0.57 0.76 A 0.06 0.43 0.24 0000 --- --- --- --- 016854 00000 ------------ G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 017134 00000 ------------ G 0.76 0.78 0.77 A 0.24 0.22 0.23 0000 --- --- --- --- 017200 00000 ------------ G 0.87 0.91 0.89 C 0.13 0.09 0.11 0000 --- --- --- --- 017247 00000 ------------ G 0.78 0.85 0.82 A 0.22 0.15 0.18 0000 --- --- --- --- 017493 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 018037 00000 ------------ A 0.67 0.39 0.53 T 0.33 0.61 0.47 0000 --- --- --- --- 018068 00000 ------------ C 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 018381 00000 ------------ C 0.92 0.89 0.90 A 0.08 0.11 0.10 0000 --- --- --- --- 018521 00000 ------------ T 0.67 0.39 0.53 G 0.33 0.61 0.47 0000 --- --- --- --- 018955 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019065 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019079 00000 ------------ G 0.89 0.80 0.84 A 0.11 0.20 0.16 0000 --- --- --- --- 019269 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 019409 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019417 00000 ------------ C 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 019580 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 019678 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019743 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 019853 00000 ------------ G 0.94 0.57 0.76 A 0.06 0.43 0.24 0000 --- --- --- --- 020048 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020180 00000 ------------ G 0.89 0.52 0.72 A 0.11 0.48 0.28 0000 --- --- --- --- 020348 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020546 00000 ------------ G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 020712 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020887 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 020904 00000 ------------ G 0.90 0.57 0.73 A 0.10 0.43 0.27 0000 --- --- --- --- 020905 00000 ------------ G 0.88 0.93 0.90 C 0.12 0.07 0.10 0000 --- --- --- --- 020908 00000 ------------ - 0.77 0.76 0.77 + 0.23 0.24 0.23 0000 --- --- --- --- 020930 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020961 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 021107 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021140 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021185 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 021269 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021582 00000 ------------ C 0.93 0.57 0.74 T 0.07 0.43 0.26 0000 --- --- --- --- 021866 00000 ------------ G 0.92 0.89 0.90 A 0.08 0.11 0.10 0000 --- --- --- --- 022089 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022333 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 022482 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 022791 00000 ------------ A 0.67 0.39 0.53 G 0.33 0.61 0.47 0000 --- --- --- --- 022834 00000 ------------ G 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 022943 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023101 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023192 00000 ------------ A 0.78 0.91 0.85 T 0.23 0.09 0.15 0000 --- --- --- --- 023314 00000 ------------ A 0.97 0.93 0.95 G 0.03 0.07 0.05 0000 --- --- --- --- 023398 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023546 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023617 00000 ------------ T 0.85 0.91 0.88 C 0.15 0.09 0.12 0000 --- --- --- --- 023635 00000 ------------ G 0.93 0.95 0.94 C 0.07 0.05 0.06 0000 --- --- --- --- 024154 00000 ------------ C 0.74 0.75 0.74 T 0.26 0.25 0.26 0000 --- --- --- --- 024171 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024388 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 024469 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 024502 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 024512 00000 ------------ A 0.73 0.75 0.74 G 0.27 0.25 0.26 0000 --- --- --- --- 024522 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 024609 00000 ------------ T 0.72 0.52 0.62 A 0.28 0.48 0.38 0000 --- --- --- --- 024632 00000 ------------ C 0.87 0.91 0.89 T 0.13 0.09 0.11 0000 --- --- --- --- 024718 00000 ------------ A 0.86 0.59 0.73 G 0.14 0.41 0.27 0000 --- --- --- --- 024825 00000 ------------ A 0.69 0.41 0.55 T 0.31 0.59 0.45 0000 --- --- --- --- 024831 00000 ------------ G 1.00 0.85 0.93 A 0.00 0.15 0.07 0000 --- --- --- --- 024854 00000 ------------ G 0.93 0.89 0.91 A 0.07 0.11 0.09 0000 --- --- --- --- 024998 00000 ------------ C 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 025337 00000 ------------ G 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 025510 00000 ------------ A 0.83 0.55 0.69 T 0.17 0.45 0.31 0000 --- --- --- --- 025592 00000 ------------ C 0.93 0.89 0.91 T 0.07 0.11 0.09 0000 --- --- --- --- 025732 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 025750 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 025756 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 026196 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 026409 00000 ------------ A 0.76 0.91 0.82 G 0.24 0.09 0.17 0000 --- --- --- --- 026416 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026436 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 026465 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 026749 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 026773 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 026995 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026996 00000 ------------ G 0.92 0.89 0.90 A 0.08 0.11 0.10 0000 --- --- --- --- 027112 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027198 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027261 00000 ------------ G 0.91 0.88 0.89 A 0.09 0.12 0.11 0000 --- --- --- --- 027300 00000 ------------ G 0.91 0.85 0.88 A 0.09 0.15 0.12 0000 --- --- --- --- 027345 00000 ------------ G 0.91 0.86 0.89 T 0.09 0.14 0.11 0000 --- --- --- --- 027396 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 027411 00000 ------------ G 0.91 0.88 0.89 A 0.09 0.12 0.11 0000 --- --- --- --- 027413 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 027512 00000 ------------ G 0.73 0.74 0.73 A 0.27 0.26 0.27 0000 --- --- --- --- 027606 00000 ------------ G 0.91 0.57 0.74 A 0.09 0.43 0.26 0000 --- --- --- --- 027696 00000 ------------ G 0.95 0.90 0.93 T 0.05 0.10 0.07 0000 --- --- --- --- 027750 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 028003 00000 ------------ - 0.04 0.11 0.07 + 0.96 0.89 0.93 0000 --- --- --- --- 028085 00000 ------------ A 0.91 0.92 0.91 T 0.09 0.08 0.09 0000 --- --- --- --- 028113 00000 ------------ G 0.93 0.97 0.95 A 0.07 0.03 0.05 0000 --- --- --- --- 028179 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028345 00000 ------------ C 0.93 0.54 0.74 T 0.07 0.46 0.26 0000 --- --- --- --- 028463 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028829 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028850 00000 ------------ C 0.73 0.76 0.74 T 0.27 0.24 0.26 0000 --- --- --- --- 028883 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 028987 00000 ------------ T 0.62 0.41 0.52 C 0.38 0.59 0.48 0000 --- --- --- --- 029142 00000 ------------ A 0.88 0.93 0.91 G 0.12 0.07 0.09 0000 --- --- --- --- 029258 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 029392 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029393 00000 ------------ G 0.75 0.89 0.82 A 0.25 0.11 0.18 0000 --- --- --- --- 029720 00000 ------------ A 0.62 0.42 0.53 G 0.38 0.57 0.47 0000 --- --- --- --- 029764 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 029808 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 030027 00000 ------------ G 0.73 0.76 0.74 A 0.27 0.24 0.26 0000 --- --- --- --- 030474 00000 ------------ C 0.62 0.41 0.52 T 0.38 0.59 0.48 0000 --- --- --- --- 030548 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 030596 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 030945 00000 ------------ C 0.90 0.54 0.72 T 0.10 0.46 0.28 0000 --- --- --- --- 031092 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 031118 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 031123 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 031137 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 031495 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 031720 00000 ------------ A 0.90 0.47 0.69 T 0.10 0.53 0.31 0000 --- --- --- --- 031785 00000 ------------ C 0.76 0.78 0.77 T 0.24 0.23 0.23 0000 --- --- --- --- 031987 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 032452 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032466 00000 ------------ A 0.57 0.70 0.64 C 0.43 0.30 0.36 0000 --- --- --- --- 032501 00000 ------------ A 0.64 0.50 0.57 G 0.36 0.50 0.43 0000 --- --- --- --- 032554 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032631 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 032645 00000 ------------ T 0.62 0.52 0.57 G 0.38 0.48 0.43 0000 --- --- --- --- 032832 00000 ------------ T 0.79 0.67 0.73 G 0.21 0.33 0.27 0000 --- --- --- --- 033109 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 033461 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 033925 00000 ------------ G 0.73 0.63 0.68 A 0.27 0.37 0.32 0000 --- --- --- --- 033976 00000 ------------ T 0.77 0.63 0.70 C 0.23 0.37 0.30 0000 --- --- --- --- 034363 00000 ------------ - 0.75 0.65 0.70 + 0.25 0.35 0.30 0000 --- --- --- --- 034698 00000 ------------ C 0.58 0.72 0.65 G 0.42 0.28 0.35 0000 --- --- --- --- 035089 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035096 00000 ------------ G 0.52 0.72 0.62 A 0.48 0.28 0.38 0000 --- --- --- --- 035151 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 035165 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 035169 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 035170 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 035291 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 036269 00000 ------------ C 0.91 0.72 0.81 G 0.09 0.28 0.19 0000 --- --- --- --- 036351 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 036429 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 036594 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036639 00000 ------------ A 0.73 0.63 0.68 G 0.27 0.37 0.32 0000 --- --- --- --- 036648 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037029 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 037062 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037152 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 037221 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 037224 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 037291 00000 ------------ C 0.75 0.65 0.70 T 0.25 0.35 0.30 0000 --- --- --- --- 037508 00000 ------------ A 0.77 0.63 0.70 G 0.23 0.37 0.30 0000 --- --- --- --- 037678 00000 ------------ C 0.57 0.72 0.64 T 0.43 0.28 0.36 0000 --- --- --- --- 037865 00000 ------------ A 0.73 0.63 0.68 G 0.27 0.37 0.32 0000 --- --- --- --- 037993 00000 ------------ T 0.73 0.63 0.68 C 0.27 0.37 0.32 0000 --- --- --- --- 038025 00000 ------------ T 0.73 0.63 0.68 G 0.27 0.37 0.32 0000 --- --- --- --- 038249 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038323 00000 ------------ C 0.75 0.65 0.70 G 0.25 0.35 0.30 0000 --- --- --- --- 038408 00000 ------------ G 0.73 0.63 0.68 T 0.27 0.37 0.32 0000 --- --- --- --- 038513 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038542 00000 ------------ T 0.73 0.63 0.68 C 0.27 0.37 0.32 0000 --- --- --- --- 038581 00000 ------------ T 0.79 0.63 0.71 C 0.21 0.37 0.29 0000 --- --- --- --- 038826 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 038924 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038930 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038995 00000 ------------ A 0.73 0.63 0.68 G 0.27 0.37 0.32 0000 --- --- --- --- 039185 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 039232 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 039236 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039271 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 039329 00000 ------------ G 0.73 0.63 0.68 C 0.27 0.37 0.32 0000 --- --- --- --- 039431 00000 ------------ A 0.73 0.63 0.68 G 0.27 0.37 0.32 0000 --- --- --- --- 039579 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 039584 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 039616 00000 ------------ T 0.73 0.63 0.68 C 0.27 0.37 0.32 0000 --- --- --- --- 039656 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039736 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039787 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 039847 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 040326 00117 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0039 CCA CCG PRO(P) PRO(P) 040407 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040514 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040808 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040857 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041062 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 041261 00000 ------------ - 0.21 0.36 0.28 + 0.79 0.64 0.72 0000 --- --- --- --- 041308 00000 ------------ G 0.79 0.69 0.75 C 0.21 0.31 0.25 0000 --- --- --- --- 041428 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 041580 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 041642 00000 ------------ T 0.54 0.72 0.63 C 0.46 0.28 0.37 0000 --- --- --- --- 041664 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 041701 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041730 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042138 00000 ------------ - 0.72 0.63 0.67 + 0.28 0.37 0.33 0000 --- --- --- --- 042179 00000 ------------ T 0.72 0.63 0.67 C 0.28 0.37 0.33 0000 --- --- --- --- 042264 00000 ------------ C 0.52 0.72 0.62 T 0.48 0.28 0.38 0000 --- --- --- --- 042357 00000 ------------ G 0.55 0.70 0.62 A 0.45 0.30 0.38 0000 --- --- --- --- 042542 00333 SYNON C 0.70 0.64 0.67 A 0.30 0.36 0.33 0111 GGC GGA GLY(G) GLY(G) 042579 00370 NON-SYN A 1.00 0.93 0.97 G 0.00 0.07 0.03 0124 AAG GAG LYS(K) GLU(E) 042652 00443 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042843 00634 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 043108 00899 3' UTR T 0.52 0.72 0.62 G 0.48 0.28 0.38 0000 --- --- --- --- 043245 00000 ------------ C 0.78 0.63 0.71 T 0.22 0.37 0.29 0000 --- --- --- --- 043356 00000 ------------ T 0.70 0.63 0.67 G 0.30 0.37 0.33 0000 --- --- --- --- 043511 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 043642 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 043643 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 043748 00000 ------------ G 0.78 0.65 0.71 C 0.23 0.35 0.29 0000 --- --- --- --- 044049 00000 ------------ A 0.70 0.64 0.67 G 0.30 0.36 0.33 0000 --- --- --- --- 044067 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 044282 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 044547 00000 ------------ T 0.65 0.43 0.54 C 0.35 0.57 0.46 0000 --- --- --- --- 044700 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 044781 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 044899 00000 ------------ C 0.54 0.65 0.60 T 0.46 0.35 0.40 0000 --- --- --- --- 044976 00000 ------------ G 0.59 0.67 0.63 T 0.41 0.33 0.37 0000 --- --- --- --- 045007 00000 ------------ G 0.64 0.80 0.72 A 0.36 0.20 0.28 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004328: G 005568: T 011697: GA 015212: CCCC 016248: ATT 016275: T 020908: A 023101: A 025756: A 028003: AGGTA 031495: GGGCA 033109: G 034363: C 036429: CT 039232: T 039271: G 041261: GA 042138: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001102 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 001182 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001486 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001684 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001822 00000 ------------ G 0.98 0.72 0.86 A 0.02 0.28 0.14 0000 --- --- --- --- 002026 00026 5' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002027 00027 5' UTR T 0.71 0.54 0.63 C 0.29 0.46 0.37 0000 --- --- --- --- 002559 00000 ------------ C 0.75 0.57 0.66 A 0.25 0.43 0.34 0000 --- --- --- --- 003093 00000 ------------ - 0.25 0.41 0.33 + 0.75 0.59 0.67 0000 --- --- --- --- 003334 00000 ------------ G 0.73 0.59 0.66 A 0.27 0.41 0.34 0000 --- --- --- --- 003336 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 003714 00000 ------------ A 0.71 0.54 0.63 C 0.29 0.46 0.37 0000 --- --- --- --- 003772 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 003990 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004463 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004486 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005032 00000 ------------ - 0.31 0.12 0.22 + 0.69 0.88 0.78 0000 --- --- --- --- 005036 00000 ------------ A 0.70 0.88 0.78 G 0.30 0.12 0.22 0000 --- --- --- --- 005510 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 005529 00000 ------------ A 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 005941 00000 ------------ C 0.80 0.69 0.76 A 0.20 0.31 0.24 0000 --- --- --- --- 006028 00000 ------------ T 0.98 0.93 0.95 C 0.02 0.07 0.05 0000 --- --- --- --- 006248 00000 ------------ G 0.75 0.58 0.67 A 0.25 0.42 0.33 0000 --- --- --- --- 006478 00000 ------------ C 0.94 0.91 0.92 T 0.06 0.09 0.08 0000 --- --- --- --- 006572 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 006868 00000 ------------ A 0.92 0.90 0.91 G 0.08 0.10 0.09 0000 --- --- --- --- 006909 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006927 00000 ------------ G 0.94 0.93 0.93 A 0.06 0.07 0.07 0000 --- --- --- --- 006955 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 007031 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007049 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007237 00000 ------------ C 0.75 0.54 0.65 G 0.25 0.46 0.35 0000 --- --- --- --- 007358 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007405 00000 ------------ C 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 007480 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007584 00000 ------------ A 0.65 0.76 0.70 G 0.35 0.24 0.30 0000 --- --- --- --- 007586 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 007636 00000 ------------ A 0.65 0.76 0.70 G 0.35 0.24 0.30 0000 --- --- --- --- 007655 00000 ------------ G 0.69 0.89 0.79 A 0.31 0.11 0.21 0000 --- --- --- --- 007763 00000 ------------ A 0.58 0.75 0.67 G 0.42 0.25 0.33 0000 --- --- --- --- 007786 00000 ------------ G 0.67 0.89 0.78 A 0.33 0.11 0.22 0000 --- --- --- --- 007909 00000 ------------ A 0.93 0.88 0.91 G 0.07 0.12 0.09 0000 --- --- --- --- 008161 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008528 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008705 00000 ------------ A 0.64 0.78 0.70 T 0.36 0.22 0.30 0000 --- --- --- --- 008802 00000 ------------ A 0.98 0.93 0.95 G 0.02 0.07 0.05 0000 --- --- --- --- 008877 00000 ------------ C 0.95 0.87 0.91 T 0.05 0.13 0.09 0000 --- --- --- --- 008888 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 008897 00000 ------------ T 0.64 0.76 0.70 C 0.36 0.24 0.30 0000 --- --- --- --- 008927 00000 ------------ T 0.64 0.76 0.70 C 0.36 0.24 0.30 0000 --- --- --- --- 009204 00000 ------------ G 0.65 0.77 0.71 A 0.35 0.23 0.29 0000 --- --- --- --- 009335 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009590 00000 ------------ G 0.83 0.70 0.77 A 0.17 0.30 0.23 0000 --- --- --- --- 009653 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 009714 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 010301 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010345 00000 ------------ C 0.83 0.72 0.78 T 0.17 0.28 0.22 0000 --- --- --- --- 010630 00000 ------------ T 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 010646 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010890 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010911 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 011040 00000 ------------ C 0.96 0.91 0.93 T 0.04 0.09 0.07 0000 --- --- --- --- 011182 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011369 00000 ------------ A 0.83 0.60 0.72 C 0.17 0.40 0.28 0000 --- --- --- --- 011450 00000 ------------ C 0.86 0.98 0.93 T 0.14 0.02 0.07 0000 --- --- --- --- 011522 00000 ------------ C 0.69 0.89 0.79 T 0.31 0.11 0.21 0000 --- --- --- --- 011542 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 011572 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 011608 00000 ------------ T 0.62 0.50 0.56 C 0.38 0.50 0.44 0000 --- --- --- --- 011671 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011702 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 011716 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 011724 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 012062 00000 ------------ C 0.65 0.55 0.60 T 0.35 0.45 0.40 0000 --- --- --- --- 012138 00000 ------------ T 0.65 0.52 0.59 C 0.35 0.48 0.41 0000 --- --- --- --- 012267 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012435 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012548 00000 ------------ - 0.73 0.84 0.78 + 0.27 0.16 0.22 0000 --- --- --- --- 012555 00000 ------------ A 0.73 0.84 0.78 C 0.27 0.16 0.22 0000 --- --- --- --- 012711 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012723 00000 ------------ T 0.73 0.82 0.77 G 0.27 0.18 0.23 0000 --- --- --- --- 012826 00000 ------------ A 0.65 0.83 0.73 T 0.35 0.17 0.27 0000 --- --- --- --- 012827 00000 ------------ A 0.65 0.83 0.73 C 0.35 0.17 0.27 0000 --- --- --- --- 012863 00000 ------------ C 0.60 0.78 0.69 T 0.40 0.22 0.31 0000 --- --- --- --- 013014 00000 ------------ A 0.65 0.83 0.73 G 0.35 0.17 0.27 0000 --- --- --- --- 013020 00000 ------------ G 0.96 0.91 0.94 C 0.04 0.09 0.06 0000 --- --- --- --- 013139 00000 ------------ A 0.63 0.83 0.74 G 0.37 0.17 0.26 0000 --- --- --- --- 013454 00000 ------------ G 0.62 0.88 0.76 A 0.38 0.12 0.24 0000 --- --- --- --- 013720 00000 ------------ A 0.65 0.52 0.59 G 0.35 0.48 0.41 0000 --- --- --- --- 013811 00000 ------------ - 0.65 0.83 0.73 + 0.35 0.17 0.27 0000 --- --- --- --- 013816 00000 ------------ C 0.82 0.89 0.87 T 0.18 0.11 0.13 0000 --- --- --- --- 013829 00000 ------------ T 0.88 0.95 0.92 C 0.12 0.05 0.08 0000 --- --- --- --- 013839 00000 ------------ T 0.62 0.52 0.56 G 0.38 0.48 0.44 0000 --- --- --- --- 013964 00000 ------------ A 0.95 0.95 0.95 G 0.05 0.05 0.05 0000 --- --- --- --- 013980 00000 ------------ G 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 013982 00000 ------------ T 0.95 0.95 0.95 C 0.05 0.05 0.05 0000 --- --- --- --- 013998 00000 ------------ - 0.72 0.91 0.82 + 0.28 0.09 0.18 0000 --- --- --- --- 014417 00000 ------------ A 0.68 0.87 0.77 G 0.32 0.13 0.23 0000 --- --- --- --- 014435 00000 ------------ A 0.65 0.82 0.73 G 0.35 0.17 0.27 0000 --- --- --- --- 014535 00000 ------------ C 0.77 0.93 0.84 G 0.23 0.07 0.16 0000 --- --- --- --- 014553 00000 ------------ T 0.65 0.83 0.73 A 0.35 0.17 0.27 0000 --- --- --- --- 014569 00000 ------------ T 0.65 0.83 0.73 C 0.35 0.17 0.27 0000 --- --- --- --- 014638 00000 ------------ T 0.60 0.48 0.54 C 0.40 0.52 0.46 0000 --- --- --- --- 014671 00000 ------------ C 0.65 0.83 0.73 A 0.35 0.17 0.27 0000 --- --- --- --- 015014 00000 ------------ C 0.96 0.95 0.96 G 0.04 0.05 0.04 0000 --- --- --- --- 015093 00000 ------------ C 0.65 0.52 0.59 T 0.35 0.48 0.41 0000 --- --- --- --- 015225 00000 ------------ A 0.93 0.90 0.92 G 0.07 0.10 0.08 0000 --- --- --- --- 015234 00000 ------------ G 0.96 0.93 0.94 A 0.04 0.07 0.06 0000 --- --- --- --- 015329 00000 ------------ G 0.96 0.93 0.94 A 0.04 0.07 0.06 0000 --- --- --- --- 015378 00000 ------------ C 0.46 0.69 0.57 G 0.54 0.31 0.43 0000 --- --- --- --- 015387 00000 ------------ C 1.00 0.86 0.93 G 0.00 0.14 0.07 0000 --- --- --- --- 015419 00000 ------------ A 0.91 0.98 0.94 G 0.09 0.02 0.06 0000 --- --- --- --- 015639 00000 ------------ C 0.48 0.55 0.51 T 0.52 0.45 0.49 0000 --- --- --- --- 015892 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016012 00000 ------------ G 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 016022 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 016165 00000 ------------ C 0.67 0.83 0.75 A 0.33 0.17 0.25 0000 --- --- --- --- 016171 00000 ------------ G 0.91 0.87 0.89 A 0.09 0.13 0.11 0000 --- --- --- --- 016176 00000 ------------ C 0.70 0.83 0.76 G 0.30 0.17 0.24 0000 --- --- --- --- 016266 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 016274 00000 ------------ C 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 016297 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 016310 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 016419 00000 ------------ A 0.78 0.72 0.75 G 0.22 0.28 0.25 0000 --- --- --- --- 016625 00000 ------------ A 0.80 0.66 0.73 G 0.20 0.34 0.27 0000 --- --- --- --- 016711 00000 ------------ T 0.76 0.72 0.74 C 0.24 0.28 0.26 0000 --- --- --- --- 016713 00000 ------------ C 0.59 0.74 0.66 A 0.41 0.26 0.34 0000 --- --- --- --- 016715 00000 ------------ G 0.76 0.72 0.74 A 0.24 0.28 0.26 0000 --- --- --- --- 016753 00000 ------------ G 0.76 0.72 0.74 A 0.24 0.28 0.26 0000 --- --- --- --- 016756 00000 ------------ C 0.76 0.72 0.74 G 0.24 0.28 0.26 0000 --- --- --- --- 016910 00000 ------------ C 0.74 0.54 0.64 T 0.26 0.46 0.36 0000 --- --- --- --- 016914 00000 ------------ C 0.57 0.72 0.64 T 0.43 0.28 0.36 0000 --- --- --- --- 016976 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017027 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017044 00000 ------------ A 0.74 0.72 0.73 G 0.26 0.28 0.27 0000 --- --- --- --- 017138 00000 ------------ G 0.92 0.93 0.93 A 0.08 0.07 0.07 0000 --- --- --- --- 017379 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 017776 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017790 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017825 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017904 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018086 00000 ------------ T 0.79 0.45 0.63 C 0.21 0.55 0.37 0000 --- --- --- --- 018115 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018176 00000 ------------ T 0.70 0.33 0.52 C 0.30 0.67 0.48 0000 --- --- --- --- 018212 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 018319 00000 ------------ T 0.87 0.57 0.72 A 0.13 0.43 0.28 0000 --- --- --- --- 018469 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 018480 00000 ------------ C 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 018564 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018572 00000 ------------ A 0.70 0.78 0.74 G 0.30 0.22 0.26 0000 --- --- --- --- 018702 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018781 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 019112 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019147 00000 ------------ C 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 019219 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 019356 00000 ------------ C 0.44 0.83 0.62 T 0.56 0.17 0.38 0000 --- --- --- --- 019365 00000 ------------ T 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 019512 00000 ------------ A 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 019567 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 019612 00000 ------------ C 0.75 0.36 0.57 T 0.25 0.64 0.43 0000 --- --- --- --- 019874 00000 ------------ C 0.44 0.84 0.63 T 0.56 0.16 0.37 0000 --- --- --- --- 019880 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 019947 00000 ------------ G 0.85 0.80 0.83 A 0.15 0.20 0.17 0000 --- --- --- --- 020322 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 020323 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020342 00000 ------------ A 0.75 0.82 0.78 T 0.25 0.18 0.22 0000 --- --- --- --- 020613 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020844 00000 ------------ C 0.75 0.82 0.78 A 0.25 0.18 0.22 0000 --- --- --- --- 020891 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 020952 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 021036 00000 ------------ T 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 021077 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021171 00000 ------------ G 0.50 0.82 0.65 C 0.50 0.18 0.35 0000 --- --- --- --- 021292 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 021324 00000 ------------ A 0.81 0.54 0.68 C 0.19 0.46 0.32 0000 --- --- --- --- 021466 00000 ------------ T 0.62 0.41 0.52 C 0.38 0.59 0.48 0000 --- --- --- --- 021501 00000 ------------ C 0.74 0.41 0.58 A 0.26 0.59 0.42 0000 --- --- --- --- 021639 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 022045 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022050 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022051 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022076 00000 ------------ C 0.76 0.53 0.65 T 0.24 0.47 0.35 0000 --- --- --- --- 022079 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022157 00000 ------------ G 1.00 0.88 0.94 A 0.00 0.12 0.06 0000 --- --- --- --- 022234 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022286 00000 ------------ T 0.98 0.74 0.86 A 0.02 0.26 0.14 0000 --- --- --- --- 022563 00000 ------------ T 0.68 0.40 0.54 A 0.33 0.60 0.46 0000 --- --- --- --- 022661 00000 ------------ G 0.75 0.41 0.59 A 0.25 0.59 0.41 0000 --- --- --- --- 022751 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022877 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022920 00000 ------------ A 0.96 0.86 0.91 G 0.04 0.14 0.09 0000 --- --- --- --- 022977 00000 ------------ A 0.33 0.80 0.55 T 0.67 0.20 0.45 0000 --- --- --- --- 023001 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 023222 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023350 00279 SYNON C 0.74 0.41 0.58 T 0.26 0.59 0.42 0061 CAC CAT HIS(H) HIS(H) 023519 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 023532 00000 ------------ T 0.75 0.43 0.60 C 0.25 0.57 0.40 0000 --- --- --- --- 023539 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 023677 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023863 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 023925 00000 ------------ G 0.50 0.82 0.66 A 0.50 0.18 0.34 0000 --- --- --- --- 024026 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 024126 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024180 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024213 00000 ------------ C 0.93 0.90 0.92 T 0.07 0.10 0.08 0000 --- --- --- --- 024503 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 024655 00000 ------------ G 0.81 0.54 0.68 T 0.19 0.46 0.32 0000 --- --- --- --- 024772 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 024916 00348 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0084 CAC CAT HIS(H) HIS(H) 024932 00364 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0090 GTC ATC VAL(V) ILE(I) 025075 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 025450 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025559 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 025599 00000 ------------ G 0.44 0.77 0.60 T 0.56 0.23 0.40 0000 --- --- --- --- 025800 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026573 00000 ------------ T 0.96 0.89 0.92 C 0.04 0.11 0.08 0000 --- --- --- --- 026625 00000 ------------ G 0.74 0.64 0.69 A 0.26 0.36 0.31 0000 --- --- --- --- 026770 00000 ------------ G 0.75 0.83 0.79 C 0.25 0.17 0.21 0000 --- --- --- --- 026909 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 026917 00000 ------------ A 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 026933 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027145 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027279 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027338 00000 ------------ A 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 027479 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027537 00000 ------------ C 0.31 0.80 0.54 T 0.69 0.20 0.46 0000 --- --- --- --- 027682 00729 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0211 AAC AAT ASN(N) ASN(N) 027847 00000 ------------ A 1.00 0.87 0.93 G 0.00 0.13 0.07 0000 --- --- --- --- 027944 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 028020 00000 ------------ G 0.97 0.80 0.88 A 0.03 0.20 0.12 0000 --- --- --- --- 028414 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028465 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 028725 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029019 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029206 00000 ------------ C 0.92 0.93 0.93 T 0.08 0.07 0.07 0000 --- --- --- --- 029410 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 029434 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 029506 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 029725 00000 ------------ G 0.59 0.48 0.53 A 0.41 0.52 0.47 0000 --- --- --- --- 029831 00000 ------------ C 0.65 0.64 0.64 T 0.35 0.36 0.36 0000 --- --- --- --- 029892 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 030341 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030350 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 030383 00000 ------------ T 0.75 0.65 0.70 C 0.25 0.35 0.30 0000 --- --- --- --- 030479 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030500 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 030778 00000 ------------ G 0.94 0.89 0.91 C 0.06 0.11 0.09 0000 --- --- --- --- 030986 01053 SYNON G 0.61 0.67 0.64 A 0.39 0.33 0.36 0319 AAG AAA LYS(K) LYS(K) 031079 01146 SYNON G 0.61 0.65 0.63 A 0.39 0.35 0.37 0350 GCG GCA ALA(A) ALA(A) 031404 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031460 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 031587 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031685 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032153 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032290 01273 NON-SYN G 1.00 0.96 0.98 C 0.00 0.04 0.02 0393 GAG CAG GLU(E) GLN(Q) 032520 00000 ------------ T 0.62 0.43 0.52 C 0.38 0.57 0.48 0000 --- --- --- --- 032819 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 032933 00000 ------------ G 0.77 0.91 0.84 A 0.23 0.09 0.16 0000 --- --- --- --- 033036 00000 ------------ C 0.77 0.91 0.84 T 0.23 0.09 0.16 0000 --- --- --- --- 033064 00000 ------------ A 0.78 0.91 0.84 T 0.22 0.09 0.16 0000 --- --- --- --- 033085 00000 ------------ C 0.77 0.91 0.84 G 0.23 0.09 0.16 0000 --- --- --- --- 033528 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033588 00000 ------------ A 0.80 0.83 0.82 G 0.20 0.17 0.18 0000 --- --- --- --- 033631 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033750 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033800 00000 ------------ G 0.80 0.78 0.79 T 0.20 0.22 0.21 0000 --- --- --- --- 033945 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 033953 00000 ------------ G 0.67 0.43 0.55 A 0.33 0.57 0.45 0000 --- --- --- --- 034023 00000 ------------ G 0.61 0.65 0.63 T 0.39 0.35 0.37 0000 --- --- --- --- 034307 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 034525 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 034954 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035035 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 035084 00000 ------------ T 0.77 0.91 0.84 C 0.23 0.09 0.16 0000 --- --- --- --- 036029 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036034 00000 ------------ G 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 036233 00000 ------------ C 0.69 0.43 0.57 G 0.31 0.57 0.43 0000 --- --- --- --- 036281 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 036502 00000 ------------ - 0.44 0.24 0.34 + 0.56 0.76 0.66 0000 --- --- --- --- 036555 00000 ------------ A 0.65 0.78 0.71 G 0.35 0.23 0.29 0000 --- --- --- --- 036593 00000 ------------ T 0.57 0.76 0.66 C 0.43 0.24 0.34 0000 --- --- --- --- 036698 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036715 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 036857 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 036882 00000 ------------ C 0.60 0.73 0.66 A 0.40 0.27 0.34 0000 --- --- --- --- 037122 00000 ------------ C 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 037280 01697 NON-SYN G 0.98 0.96 0.97 A 0.02 0.04 0.03 0534 GGG GAG GLY(G) GLU(E) 037961 02378 3' UTR - 0.42 0.26 0.34 + 0.58 0.74 0.66 0000 --- --- --- --- 037983 02400 3' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 038150 02567 3' UTR G 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 038522 02939 3' UTR G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 038635 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 038658 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 038696 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 038701 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 038925 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038969 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039167 00000 ------------ T 1.00 0.93 0.96 C 0.00 0.07 0.04 0000 --- --- --- --- 039281 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039334 00000 ------------ A 0.79 0.83 0.81 G 0.21 0.17 0.19 0000 --- --- --- --- 039377 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 039409 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 039498 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 039600 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 039622 00000 ------------ C 1.00 0.79 0.90 T 0.00 0.21 0.10 0000 --- --- --- --- 039822 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039828 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039831 00000 ------------ G 0.58 0.74 0.66 A 0.42 0.26 0.34 0000 --- --- --- --- 040023 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 040034 00000 ------------ C 0.69 0.42 0.57 T 0.31 0.58 0.43 0000 --- --- --- --- 040107 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040163 00000 ------------ C 0.79 0.86 0.82 A 0.21 0.14 0.18 0000 --- --- --- --- 040258 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 040310 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 040339 00000 ------------ T 0.79 0.83 0.81 C 0.21 0.17 0.19 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003093: TA 005032: C 012548: CCCAG 013811: AATA 013998: T 018212: A 023539: T 024026: AATAA 025559: AGGACTCCTA 029410: A 031460: TGG 033945: A 034307: TT 036502: CTAT 037961: A 037983: CTT 038635: G 039409: GGT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000072 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000111 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000149 00000 ------------ G 0.73 0.72 0.72 A 0.27 0.28 0.28 0000 --- --- --- --- 000208 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000653 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000994 00000 ------------ C 0.70 1.00 0.85 T 0.30 0.00 0.15 0000 --- --- --- --- 001038 00000 ------------ C 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 001039 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001096 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001233 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001668 00000 ------------ G 0.55 0.98 0.76 A 0.45 0.02 0.24 0000 --- --- --- --- 002007 00000 ------------ G 0.87 0.52 0.66 A 0.13 0.48 0.34 0000 --- --- --- --- 002378 00000 ------------ - 0.40 0.00 0.20 + 0.60 1.00 0.80 0000 --- --- --- --- 002425 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 002688 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002790 00000 ------------ T 0.83 0.39 0.61 A 0.17 0.61 0.39 0000 --- --- --- --- 003303 00099 NON-SYN G 1.00 0.89 0.94 C 0.00 0.11 0.06 0007 GAC CAC ASP(D) HIS(H) 003736 00000 ------------ A 0.79 0.32 0.53 G 0.21 0.68 0.47 0000 --- --- --- --- 003974 00000 ------------ C 0.52 0.97 0.74 A 0.48 0.03 0.26 0000 --- --- --- --- 004021 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 004102 00000 ------------ A 0.81 0.76 0.79 C 0.19 0.24 0.21 0000 --- --- --- --- 004118 00000 ------------ C 0.93 0.98 0.95 A 0.07 0.02 0.05 0000 --- --- --- --- 004275 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004871 00000 ------------ C 0.42 0.98 0.72 G 0.58 0.02 0.28 0000 --- --- --- --- 004957 00000 ------------ C 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 004983 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005034 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 005079 00000 ------------ A 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 005341 00000 ------------ T 0.93 0.98 0.96 C 0.07 0.02 0.04 0000 --- --- --- --- 005569 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006303 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 007324 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007325 00000 ------------ T 0.71 0.72 0.72 C 0.29 0.28 0.28 0000 --- --- --- --- 007332 00000 ------------ C 0.54 0.97 0.74 T 0.46 0.03 0.26 0000 --- --- --- --- 008631 00000 ------------ C 0.71 1.00 0.87 T 0.29 0.00 0.13 0000 --- --- --- --- 008777 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 009404 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 009531 00000 ------------ G 0.91 0.52 0.73 A 0.09 0.48 0.27 0000 --- --- --- --- 009735 00000 ------------ G 0.54 0.98 0.76 A 0.46 0.02 0.24 0000 --- --- --- --- 009894 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 009923 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011116 00000 ------------ A 0.58 1.00 0.79 G 0.42 0.00 0.21 0000 --- --- --- --- 011787 00000 ------------ - 0.19 0.70 0.44 + 0.81 0.30 0.56 0000 --- --- --- --- 011793 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 011822 00000 ------------ G 0.52 0.98 0.74 A 0.48 0.02 0.26 0000 --- --- --- --- 012127 00000 ------------ - 0.00 0.10 0.04 + 1.00 0.90 0.96 0000 --- --- --- --- 012134 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012301 00000 ------------ G 0.79 0.35 0.61 A 0.21 0.65 0.39 0000 --- --- --- --- 012345 00000 ------------ T 0.67 0.68 0.67 C 0.33 0.32 0.33 0000 --- --- --- --- 012384 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012825 00000 ------------ A 0.67 0.70 0.68 G 0.33 0.30 0.32 0000 --- --- --- --- 012832 00000 ------------ A 0.67 0.68 0.67 C 0.33 0.33 0.33 0000 --- --- --- --- 012841 00000 ------------ C 0.82 0.32 0.57 T 0.18 0.68 0.43 0000 --- --- --- --- 012860 00000 ------------ T 0.67 0.70 0.68 C 0.33 0.30 0.32 0000 --- --- --- --- 012992 00000 ------------ A 0.67 0.71 0.69 G 0.33 0.29 0.31 0000 --- --- --- --- 013082 00000 ------------ G 0.58 1.00 0.78 A 0.42 0.00 0.22 0000 --- --- --- --- 013184 00000 ------------ T 0.94 0.98 0.96 C 0.06 0.02 0.04 0000 --- --- --- --- 013286 00000 ------------ C 0.67 0.71 0.69 G 0.33 0.29 0.31 0000 --- --- --- --- 013354 00000 ------------ C 0.67 0.71 0.69 T 0.33 0.29 0.31 0000 --- --- --- --- 013439 00000 ------------ A 0.67 0.65 0.66 G 0.33 0.35 0.34 0000 --- --- --- --- 013449 00000 ------------ G 1.00 0.88 0.94 A 0.00 0.12 0.06 0000 --- --- --- --- 013468 00000 ------------ C 0.69 0.65 0.67 T 0.31 0.35 0.33 0000 --- --- --- --- 014261 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014568 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 015028 00000 ------------ C 0.71 0.72 0.71 T 0.29 0.28 0.29 0000 --- --- --- --- 015071 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 015100 00000 ------------ T 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 015106 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015336 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015382 00000 ------------ G 0.80 0.36 0.59 A 0.20 0.64 0.41 0000 --- --- --- --- 015400 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015954 01191 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015988 01225 3' UTR A 0.64 1.00 0.83 G 0.36 0.00 0.17 0000 --- --- --- --- 016404 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 016442 00000 ------------ A 0.95 0.87 0.91 T 0.05 0.13 0.09 0000 --- --- --- --- 017227 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 017755 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017893 00000 ------------ T 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 017922 00000 ------------ G 0.73 0.64 0.69 A 0.27 0.36 0.31 0000 --- --- --- --- 018090 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 018290 00000 ------------ G 0.90 1.00 0.96 A 0.10 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002378: AG 011787: T 012127: T 014568: CTGCT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000123 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 000163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000308 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000699 00000 ------------ G 1.00 0.92 0.97 A 0.00 0.08 0.03 0000 --- --- --- --- 001020 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 001853 00049 5' UTR A 0.69 1.00 0.84 C 0.31 0.00 0.16 0000 --- --- --- --- 002307 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 002563 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 002663 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002999 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003301 00000 ------------ - 0.30 0.37 0.34 + 0.70 0.63 0.66 0000 --- --- --- --- 003306 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003380 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 003679 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004055 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004523 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004630 00000 ------------ C 0.98 0.86 0.92 A 0.02 0.14 0.08 0000 --- --- --- --- 004649 00000 ------------ G 0.81 0.52 0.66 A 0.19 0.48 0.34 0000 --- --- --- --- 004672 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004726 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005443 00000 ------------ C 0.65 1.00 0.82 T 0.35 0.00 0.18 0000 --- --- --- --- 005566 00224 NON-SYN A 0.65 1.00 0.82 T 0.35 0.00 0.18 0056 AAG ATG LYS(K) MET(M) 005769 00000 ------------ G 0.73 0.40 0.58 C 0.27 0.60 0.42 0000 --- --- --- --- 005788 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007792 00000 ------------ A 0.62 1.00 0.81 C 0.38 0.00 0.19 0000 --- --- --- --- 007957 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007987 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 008165 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008350 00000 ------------ T 0.67 0.39 0.53 C 0.33 0.61 0.47 0000 --- --- --- --- 008399 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008488 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008503 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008820 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 008884 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009175 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009535 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009588 00000 ------------ C 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 009963 00000 ------------ G 0.67 0.39 0.53 A 0.33 0.61 0.47 0000 --- --- --- --- 009971 00000 ------------ C 0.67 0.39 0.53 T 0.33 0.61 0.47 0000 --- --- --- --- 010160 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 010221 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010684 00000 ------------ G 0.73 0.48 0.61 C 0.27 0.52 0.39 0000 --- --- --- --- 010735 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011027 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 011035 00000 ------------ A 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 011037 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011471 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 011490 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011522 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011561 00000 ------------ G 0.66 0.65 0.66 A 0.34 0.35 0.34 0000 --- --- --- --- 012142 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 012234 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012249 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 012298 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012350 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012413 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 012816 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 013077 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013260 00000 ------------ A 0.83 0.68 0.76 G 0.17 0.32 0.24 0000 --- --- --- --- 013332 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013636 00000 ------------ - 0.93 0.69 0.82 + 0.07 0.31 0.18 0000 --- --- --- --- 013744 00000 ------------ - 0.82 0.81 0.82 + 0.17 0.19 0.18 0000 --- --- --- --- 014187 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 014826 00778 NON-SYN G 0.98 0.98 0.98 A 0.02 0.02 0.02 0241 GGG AGG GLY(G) ARG(R) 014942 00894 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0279 ACC ACT THR(T) THR(T) 014951 00903 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0282 GAC GAT ASP(D) ASP(D) 015065 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015242 01112 NON-SYN C 1.00 0.97 0.99 T 0.00 0.03 0.01 0352 CCG CTG PRO(P) LEU(L) 015481 00000 ------------ G 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 015502 01247 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0397 CGA CAA ARG(R) GLN(Q) 015717 01462 NON-SYN A 0.88 0.64 0.77 G 0.12 0.36 0.23 0469 AAG GAG LYS(K) GLU(E) 015830 01489 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0478 CGG TGG ARG(R) TRP(W) 016370 02029 3' UTR C 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 016877 02536 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017165 02824 3' UTR G 0.56 0.66 0.60 A 0.44 0.34 0.40 0000 --- --- --- --- 017257 02916 3' UTR C 0.90 0.69 0.80 T 0.10 0.31 0.20 0000 --- --- --- --- 017272 02931 3' UTR C 0.62 0.74 0.68 T 0.38 0.26 0.32 0000 --- --- --- --- 017437 00000 ------------ C 0.90 0.61 0.76 T 0.10 0.39 0.24 0000 --- --- --- --- 018123 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018642 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001020: A 003301: CT 012350: A 013636: TTGA 013744: TTAA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000174 00000 ------------ C 0.98 0.63 0.81 T 0.02 0.37 0.19 0000 --- --- --- --- 000392 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000860 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000902 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000977 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001210 00631 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0208 GTG CTG VAL(V) LEU(L) 002146 00000 ------------ T 0.56 0.70 0.63 G 0.44 0.30 0.37 0000 --- --- --- --- 002190 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002295 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002322 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 002406 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002433 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002474 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002556 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002675 00000 ------------ C 0.98 0.65 0.82 T 0.02 0.35 0.18 0000 --- --- --- --- 002796 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002881 00000 ------------ C 0.58 0.76 0.67 G 0.42 0.24 0.33 0000 --- --- --- --- 003075 00000 ------------ A 0.67 0.76 0.71 G 0.33 0.24 0.29 0000 --- --- --- --- 003153 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003199 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001075 00000 ------------ G 0.74 0.80 0.77 T 0.26 0.20 0.23 0000 --- --- --- --- 001079 00000 ------------ C 0.74 0.77 0.76 G 0.26 0.23 0.24 0000 --- --- --- --- 001080 00000 ------------ T 0.67 0.95 0.81 G 0.33 0.05 0.19 0000 --- --- --- --- 001285 00000 ------------ C 0.74 0.80 0.77 G 0.26 0.20 0.23 0000 --- --- --- --- 001445 00000 ------------ C 0.81 0.52 0.66 T 0.19 0.48 0.34 0000 --- --- --- --- 001842 00051 5' UTR C 0.93 0.54 0.73 T 0.07 0.46 0.27 0000 --- --- --- --- 002092 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002559 00000 ------------ A 0.73 0.74 0.73 G 0.27 0.26 0.27 0000 --- --- --- --- 002737 00000 ------------ A 0.75 0.71 0.73 G 0.25 0.29 0.27 0000 --- --- --- --- 002963 00000 ------------ C 0.84 0.78 0.81 A 0.16 0.23 0.19 0000 --- --- --- --- 003319 00000 ------------ C 0.82 0.57 0.70 G 0.17 0.43 0.30 0000 --- --- --- --- 003385 00000 ------------ A 0.93 0.95 0.94 G 0.07 0.05 0.06 0000 --- --- --- --- 003502 00000 ------------ G 0.93 0.79 0.85 A 0.07 0.21 0.15 0000 --- --- --- --- 003572 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003584 00000 ------------ A 0.80 0.76 0.78 G 0.20 0.24 0.22 0000 --- --- --- --- 004323 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004480 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004487 00000 ------------ G 0.67 0.96 0.81 A 0.33 0.04 0.19 0000 --- --- --- --- 004655 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004918 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004954 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004985 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004993 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005083 00000 ------------ A 0.89 0.76 0.82 G 0.11 0.24 0.18 0000 --- --- --- --- 005094 00000 ------------ G 0.67 0.96 0.81 A 0.33 0.04 0.19 0000 --- --- --- --- 005200 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005597 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 005862 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006084 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006154 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 006779 00000 ------------ A 0.93 0.77 0.85 G 0.07 0.23 0.15 0000 --- --- --- --- 007503 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007556 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 008079 00000 ------------ G 0.75 0.74 0.74 T 0.25 0.26 0.26 0000 --- --- --- --- 008089 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008175 00000 ------------ C 0.82 0.54 0.68 T 0.18 0.46 0.32 0000 --- --- --- --- 008281 00000 ------------ C 0.74 0.96 0.85 T 0.26 0.04 0.15 0000 --- --- --- --- 008572 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008680 00000 ------------ T 0.67 0.95 0.80 C 0.33 0.05 0.20 0000 --- --- --- --- 008779 00000 ------------ C 0.86 0.52 0.69 G 0.14 0.48 0.31 0000 --- --- --- --- 008854 00000 ------------ C 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 008898 00000 ------------ G 0.86 0.52 0.69 A 0.14 0.48 0.31 0000 --- --- --- --- 009022 00000 ------------ G 0.67 0.95 0.81 A 0.33 0.05 0.19 0000 --- --- --- --- 009150 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009238 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009411 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 009422 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009635 00000 ------------ A 0.75 0.73 0.74 G 0.25 0.27 0.26 0000 --- --- --- --- 009680 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009806 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 010289 00000 ------------ C 0.74 0.95 0.85 T 0.26 0.05 0.15 0000 --- --- --- --- 010304 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010571 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010698 00000 ------------ G 0.90 0.78 0.84 A 0.10 0.22 0.16 0000 --- --- --- --- 010754 00000 ------------ G 0.72 0.74 0.73 A 0.28 0.26 0.27 0000 --- --- --- --- 010992 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011108 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011114 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 011351 00000 ------------ G 0.69 0.96 0.83 A 0.31 0.04 0.17 0000 --- --- --- --- 011432 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 011448 00000 ------------ A 0.82 0.54 0.68 G 0.18 0.46 0.32 0000 --- --- --- --- 011723 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011937 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011965 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011978 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012386 00000 ------------ T 0.74 0.73 0.73 G 0.26 0.27 0.27 0000 --- --- --- --- 012639 00000 ------------ A 0.72 0.74 0.73 G 0.28 0.26 0.27 0000 --- --- --- --- 012718 00000 ------------ A 0.72 0.74 0.73 C 0.28 0.26 0.27 0000 --- --- --- --- 012914 00000 ------------ G 0.67 0.96 0.82 A 0.33 0.04 0.18 0000 --- --- --- --- 013092 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015024 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 015144 00000 ------------ T 0.39 0.67 0.53 A 0.61 0.33 0.47 0000 --- --- --- --- 015917 00000 ------------ G 0.92 0.78 0.85 A 0.08 0.22 0.15 0000 --- --- --- --- 016027 00000 ------------ A 0.81 0.57 0.69 G 0.19 0.43 0.31 0000 --- --- --- --- 016377 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 016998 00000 ------------ A 0.72 0.72 0.72 T 0.28 0.28 0.28 0000 --- --- --- --- 017176 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017375 00000 ------------ C 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 017896 00360 SYNON T 0.97 1.00 0.99 C 0.03 0.00 0.01 0071 GAT GAC ASP(D) ASP(D) 018330 00000 ------------ A 0.32 0.67 0.51 T 0.68 0.33 0.49 0000 --- --- --- --- 018586 00000 ------------ G 0.72 0.72 0.72 C 0.28 0.28 0.28 0000 --- --- --- --- 018797 00000 ------------ C 0.87 0.96 0.92 T 0.13 0.04 0.08 0000 --- --- --- --- 020278 00649 NON-SYN G 0.90 0.95 0.93 C 0.10 0.05 0.07 0168 GTT CTT VAL(V) LEU(L) 020598 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 021291 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 021356 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 021368 00000 ------------ T 0.90 0.67 0.78 G 0.10 0.33 0.22 0000 --- --- --- --- 021435 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 022305 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 022783 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 022939 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 023008 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023090 00000 ------------ A 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 024234 00000 ------------ C 0.79 1.00 0.91 T 0.21 0.00 0.09 0000 --- --- --- --- 024314 00000 ------------ C 0.86 0.76 0.80 T 0.14 0.24 0.20 0000 --- --- --- --- 024659 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024670 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024762 00000 ------------ G 0.77 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 024892 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 025440 00000 ------------ A 0.78 1.00 0.90 G 0.23 0.00 0.10 0000 --- --- --- --- 025616 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 025651 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 025927 00000 ------------ A 0.86 0.76 0.81 G 0.14 0.24 0.19 0000 --- --- --- --- 026106 01066 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0307 GTA ATA VAL(V) ILE(I) 026361 01223 NON-SYN C 0.82 1.00 0.91 T 0.18 0.00 0.09 0359 ACG ATG THR(T) MET(M) 026972 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027766 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 027970 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028069 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028073 00000 ------------ T 0.38 0.72 0.56 G 0.62 0.28 0.44 0000 --- --- --- --- 028113 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 028240 00000 ------------ G 0.93 0.76 0.84 T 0.07 0.24 0.16 0000 --- --- --- --- 028682 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028742 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 028835 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 029075 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029403 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 029581 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 029669 01317 SYNON T 1.00 0.96 0.98 C 0.00 0.04 0.02 0390 GAT GAC ASP(D) ASP(D) 029939 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 029969 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 030047 00000 ------------ G 0.87 0.75 0.80 T 0.13 0.25 0.20 0000 --- --- --- --- 030386 00000 ------------ A 0.82 0.76 0.79 G 0.17 0.24 0.21 0000 --- --- --- --- 030706 00000 ------------ A 0.87 0.80 0.83 T 0.13 0.20 0.17 0000 --- --- --- --- 030745 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 030809 00000 ------------ T 0.87 0.91 0.89 C 0.13 0.09 0.11 0000 --- --- --- --- 031176 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 031447 00000 ------------ - 0.80 1.00 0.90 + 0.20 0.00 0.10 0000 --- --- --- --- 031594 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 031810 00000 ------------ T 0.82 0.76 0.79 C 0.18 0.24 0.21 0000 --- --- --- --- 031831 00000 ------------ G 0.34 0.67 0.51 T 0.66 0.33 0.49 0000 --- --- --- --- 031909 00000 ------------ G 0.83 0.91 0.88 A 0.17 0.09 0.12 0000 --- --- --- --- 032066 00000 ------------ C 0.86 0.91 0.89 T 0.14 0.09 0.11 0000 --- --- --- --- 032095 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 032780 02167 3' UTR T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 032816 02203 3' UTR G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 033258 02645 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033361 02748 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033578 02965 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 033750 03137 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033812 03199 3' UTR G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 033956 03343 3' UTR G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 033979 03366 3' UTR G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 034060 03447 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 034063 03450 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 034502 03889 3' UTR C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 034655 04042 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 034659 04046 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034881 04268 3' UTR C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 035009 04396 3' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 035275 04662 3' UTR - 0.17 0.09 0.12 + 0.83 0.91 0.88 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 031447: A 035275: GAGA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001601 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001653 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001669 00000 ------------ G 0.50 0.50 0.50 T 0.50 0.50 0.50 0000 --- --- --- --- 001684 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 001715 00014 5' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001728 00027 5' UTR C 0.71 0.69 0.70 A 0.29 0.31 0.30 0000 --- --- --- --- 001744 00043 5' UTR C 0.98 0.97 0.97 T 0.02 0.03 0.03 0000 --- --- --- --- 001851 00150 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002217 00000 ------------ G 0.90 0.85 0.88 T 0.10 0.15 0.12 0000 --- --- --- --- 002251 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002357 00000 ------------ T 0.69 0.55 0.62 C 0.31 0.45 0.38 0000 --- --- --- --- 002961 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003264 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003303 00000 ------------ A 0.71 0.81 0.76 C 0.29 0.19 0.24 0000 --- --- --- --- 003361 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 003373 00000 ------------ T 0.95 0.97 0.96 G 0.05 0.03 0.04 0000 --- --- --- --- 004134 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004160 00000 ------------ T 0.98 0.82 0.90 C 0.02 0.18 0.10 0000 --- --- --- --- 004270 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004707 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004954 00000 ------------ A 0.79 0.86 0.83 G 0.21 0.14 0.17 0000 --- --- --- --- 005067 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005077 00000 ------------ - 0.04 0.07 0.05 + 0.96 0.93 0.95 0000 --- --- --- --- 005114 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005201 00000 ------------ C 0.79 0.68 0.74 T 0.21 0.32 0.26 0000 --- --- --- --- 005202 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006057 00000 ------------ A 0.83 0.72 0.78 C 0.17 0.28 0.22 0000 --- --- --- --- 006213 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006646 00000 ------------ G 0.75 0.81 0.78 A 0.25 0.19 0.22 0000 --- --- --- --- 006707 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006781 00000 ------------ G 0.85 0.79 0.82 A 0.15 0.21 0.18 0000 --- --- --- --- 006804 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 006859 00000 ------------ G 0.75 0.62 0.69 A 0.25 0.38 0.31 0000 --- --- --- --- 006926 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007110 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007293 00000 ------------ C 0.82 0.66 0.74 G 0.18 0.34 0.26 0000 --- --- --- --- 007527 00000 ------------ G 0.89 0.76 0.83 A 0.11 0.24 0.17 0000 --- --- --- --- 008048 00000 ------------ T 0.86 0.80 0.83 A 0.14 0.20 0.17 0000 --- --- --- --- 008103 00000 ------------ T 0.79 0.80 0.79 C 0.21 0.20 0.21 0000 --- --- --- --- 008255 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 008377 00000 ------------ G 0.85 0.81 0.83 C 0.15 0.19 0.17 0000 --- --- --- --- 008425 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008604 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008807 00000 ------------ G 0.79 0.82 0.80 A 0.21 0.17 0.20 0000 --- --- --- --- 008810 00000 ------------ T 0.76 0.62 0.70 G 0.24 0.38 0.30 0000 --- --- --- --- 008928 00000 ------------ G 0.70 0.62 0.65 A 0.30 0.38 0.35 0000 --- --- --- --- 009367 00000 ------------ A 0.72 0.64 0.68 G 0.28 0.36 0.32 0000 --- --- --- --- 009438 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009910 00000 ------------ C 0.50 0.55 0.52 T 0.50 0.45 0.48 0000 --- --- --- --- 010071 00000 ------------ - 0.11 0.21 0.16 + 0.89 0.79 0.84 0000 --- --- --- --- 010316 00000 ------------ T 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 010417 00000 ------------ - 0.80 0.75 0.78 + 0.20 0.25 0.22 0000 --- --- --- --- 010621 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 010742 00000 ------------ C 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 010744 00000 ------------ G 0.98 0.80 0.89 T 0.02 0.20 0.11 0000 --- --- --- --- 010901 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 010969 00000 ------------ T 0.77 0.62 0.70 C 0.23 0.38 0.30 0000 --- --- --- --- 010995 00000 ------------ C 0.75 0.65 0.70 G 0.25 0.35 0.30 0000 --- --- --- --- 011019 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011132 00000 ------------ A 0.79 0.76 0.78 G 0.21 0.24 0.22 0000 --- --- --- --- 011154 00000 ------------ C 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 011416 00000 ------------ A 0.53 0.50 0.51 G 0.47 0.50 0.49 0000 --- --- --- --- 012571 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 012645 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012677 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 012726 00000 ------------ A 0.76 0.65 0.70 G 0.24 0.35 0.30 0000 --- --- --- --- 012776 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012877 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012971 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 013300 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 013370 00000 ------------ - 0.28 0.31 0.30 + 0.72 0.69 0.70 0000 --- --- --- --- 013392 00000 ------------ C 0.78 0.83 0.81 A 0.22 0.17 0.19 0000 --- --- --- --- 013675 00349 NON-SYN T 0.91 0.88 0.90 C 0.09 0.12 0.10 0008 TTC TCC PHE(F) SER(S) 013680 00354 NON-SYN T 0.74 0.67 0.70 G 0.26 0.33 0.30 0010 TTC GTC PHE(F) VAL(V) 014210 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014259 00000 ------------ A 0.72 0.65 0.69 G 0.28 0.35 0.31 0000 --- --- --- --- 014665 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015157 00000 ------------ G 0.83 0.87 0.85 A 0.17 0.13 0.15 0000 --- --- --- --- 015582 00000 ------------ T 0.80 0.76 0.78 C 0.20 0.24 0.22 0000 --- --- --- --- 015970 00000 ------------ G 0.79 0.67 0.73 A 0.21 0.33 0.27 0000 --- --- --- --- 015974 00000 ------------ A 0.79 0.86 0.82 T 0.21 0.14 0.18 0000 --- --- --- --- 016282 00000 ------------ G 0.80 0.74 0.77 C 0.20 0.26 0.23 0000 --- --- --- --- 016348 00000 ------------ A 0.74 0.71 0.73 C 0.26 0.29 0.27 0000 --- --- --- --- 016499 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016638 00000 ------------ C 0.74 0.71 0.73 T 0.26 0.29 0.27 0000 --- --- --- --- 016672 00000 ------------ - 0.02 0.05 0.03 + 0.98 0.95 0.97 0000 --- --- --- --- 017375 00000 ------------ T 0.71 0.69 0.70 A 0.29 0.31 0.30 0000 --- --- --- --- 017414 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017451 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017454 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017468 00000 ------------ T 0.73 0.67 0.70 A 0.27 0.33 0.30 0000 --- --- --- --- 017514 00000 ------------ C 0.85 0.83 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 017536 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 017585 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017710 00000 ------------ A 0.56 0.52 0.54 G 0.44 0.48 0.46 0000 --- --- --- --- 017738 00000 ------------ G 0.73 0.66 0.70 A 0.27 0.34 0.30 0000 --- --- --- --- 017824 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017864 00000 ------------ G 0.73 0.67 0.70 A 0.27 0.33 0.30 0000 --- --- --- --- 017990 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018079 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018122 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 018870 00000 ------------ G 0.72 0.65 0.68 A 0.28 0.35 0.32 0000 --- --- --- --- 018980 00000 ------------ C 0.50 0.55 0.52 T 0.50 0.45 0.48 0000 --- --- --- --- 018984 00000 ------------ C 0.50 0.55 0.52 T 0.50 0.45 0.48 0000 --- --- --- --- 019347 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 019538 00000 ------------ T 0.91 0.82 0.87 C 0.09 0.18 0.13 0000 --- --- --- --- 019632 00000 ------------ T 0.70 0.68 0.69 C 0.30 0.32 0.31 0000 --- --- --- --- 019745 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 019811 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019834 00000 ------------ A 0.89 0.82 0.86 C 0.11 0.18 0.14 0000 --- --- --- --- 019876 00000 ------------ A 0.70 0.68 0.69 G 0.30 0.32 0.31 0000 --- --- --- --- 020093 00000 ------------ A 0.88 0.82 0.85 G 0.12 0.18 0.15 0000 --- --- --- --- 020186 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020226 00000 ------------ A 0.95 0.86 0.91 G 0.05 0.14 0.09 0000 --- --- --- --- 020350 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020671 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020980 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021373 00000 ------------ C 0.59 0.57 0.58 A 0.41 0.43 0.42 0000 --- --- --- --- 021424 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 021961 00000 ------------ G 0.56 0.48 0.52 A 0.44 0.52 0.48 0000 --- --- --- --- 023276 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023344 00000 ------------ A 0.95 0.88 0.92 G 0.05 0.12 0.08 0000 --- --- --- --- 024241 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 024342 00000 ------------ G 0.74 0.70 0.72 A 0.26 0.30 0.28 0000 --- --- --- --- 024437 00912 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0196 ATC GTC ILE(I) VAL(V) 024838 00000 ------------ G 0.72 0.65 0.68 A 0.28 0.35 0.32 0000 --- --- --- --- 024988 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 025015* 025423 00000 ------------ G 0.60 0.50 0.55 T 0.40 0.50 0.45 0000 --- --- --- --- 026079 00000 ------------ C 0.75 0.77 0.76 A 0.25 0.23 0.24 0000 --- --- --- --- 026237 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026279 00000 ------------ T 0.71 0.65 0.68 C 0.29 0.35 0.32 0000 --- --- --- --- 026280 00000 ------------ G 0.71 0.67 0.69 A 0.29 0.33 0.31 0000 --- --- --- --- 026394 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 026452 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027199 00000 ------------ G 0.59 0.65 0.62 C 0.41 0.35 0.38 0000 --- --- --- --- 027204 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 027459 00000 ------------ C 1.00 0.88 0.94 G 0.00 0.12 0.06 0000 --- --- --- --- 028600 00000 ------------ A 0.61 0.65 0.63 G 0.39 0.35 0.37 0000 --- --- --- --- 028759 00000 ------------ G 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 029277 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 029800 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 029854 00000 ------------ G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 029907 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 030183 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 030380 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030558 00000 ------------ A 0.52 0.68 0.60 G 0.48 0.32 0.40 0000 --- --- --- --- 030988 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031224 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 031666 00000 ------------ C 0.74 0.72 0.73 T 0.26 0.28 0.27 0000 --- --- --- --- 034480 01356 3' UTR - 0.67 0.66 0.66 + 0.33 0.34 0.34 0000 --- --- --- --- 035359 02235 3' UTR T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 035625 02501 3' UTR G 1.00 0.88 0.94 A 0.00 0.12 0.06 0000 --- --- --- --- 036411 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 036413 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 037068 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001653: CGCCCGC 005077: A 006804: TG 008255: C 010071: AT 010417: T 012571: T 013370: T 016672: TCT 023276: T 024241: ACTT 026394: TTAA 029277: ATTTTACAGAGCGCTGATTGGTGCGTTTTAGAGTGCTGATTGGTGC 034480: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 025015 A 0.85 0.82 0.83 C 0.11 0.18 0.14 T 0.04 0.00 0.02 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000078 00000 ------------ T 0.65 0.57 0.61 C 0.35 0.43 0.39 0000 --- --- --- --- 000132 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000628 00000 ------------ T 1.00 0.85 0.94 C 0.00 0.15 0.06 0000 --- --- --- --- 000773 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000801 00000 ------------ C 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 000950 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001386 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001414 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001879 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001899 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002611 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 003677 00000 ------------ A 0.86 0.61 0.74 G 0.14 0.39 0.26 0000 --- --- --- --- 003890 00000 ------------ T 0.92 0.61 0.77 C 0.08 0.39 0.23 0000 --- --- --- --- 004042 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004100 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004271 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004505 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004854 00000 ------------ + 1.00 0.65 0.83 - 0.00 0.35 0.17 0000 --- --- --- --- 004925 00000 ------------ C 0.48 0.66 0.56 T 0.52 0.34 0.44 0000 --- --- --- --- 005301 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005377 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006050 00705 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006077 00732 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006134 00789 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006493 01148 3' UTR A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 006572 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006701 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006855 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006864 00000 ------------ A 0.75 0.60 0.68 G 0.25 0.40 0.32 0000 --- --- --- --- 007002 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007021 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007303 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 007317 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007475 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007585 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004854: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000987 00000 ------------ T 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 001211 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001313 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001433 00000 ------------ A 0.78 0.66 0.71 G 0.22 0.34 0.29 0000 --- --- --- --- 001526 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 001863 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 001875 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001972 00000 ------------ C 0.98 0.84 0.91 T 0.02 0.16 0.09 0000 --- --- --- --- 001988 00000 ------------ T 0.60 0.45 0.53 C 0.40 0.55 0.47 0000 --- --- --- --- 002085 00085 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0014 GTG GTA VAL(V) VAL(V) 002138 00000 ------------ T 0.65 0.45 0.56 C 0.35 0.55 0.44 0000 --- --- --- --- 002173 00000 ------------ G 0.98 0.77 0.88 A 0.02 0.23 0.12 0000 --- --- --- --- 002330 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002698 00000 ------------ C 0.82 0.70 0.76 T 0.18 0.30 0.24 0000 --- --- --- --- 002782 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 002845 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003004 00000 ------------ G 0.89 0.76 0.82 C 0.11 0.24 0.18 0000 --- --- --- --- 003077 00000 ------------ - 0.08 0.24 0.16 + 0.92 0.76 0.84 0000 --- --- --- --- 003238 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 003396 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 003611 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 003641 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 005459 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005926 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006054 00000 ------------ C 0.95 0.72 0.83 T 0.05 0.28 0.17 0000 --- --- --- --- 006979 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007231 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 007679 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008338 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 008489 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 008506 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009303 00000 ------------ C 0.95 0.75 0.85 T 0.05 0.25 0.15 0000 --- --- --- --- 009308 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 009313 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009663 00000 ------------ G 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 009758 00000 ------------ C 0.91 0.76 0.84 T 0.09 0.24 0.16 0000 --- --- --- --- 010643 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011317 00000 ------------ A 0.92 0.76 0.84 G 0.08 0.24 0.16 0000 --- --- --- --- 011447 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011478 00000 ------------ G 0.89 0.76 0.83 A 0.11 0.24 0.17 0000 --- --- --- --- 011497 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011792 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011951 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012582 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 012737 00000 ------------ A 0.62 0.46 0.53 G 0.38 0.54 0.47 0000 --- --- --- --- 012911 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012934 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013250 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013786 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013946 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014390 00224 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0061 GTA ATA VAL(V) ILE(I) 014424 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015720 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017375 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 018976 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019162 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019558 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020048 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020851 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022729 00000 ------------ A 0.95 0.85 0.90 G 0.05 0.15 0.10 0000 --- --- --- --- 022875 01047 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0335 CAT CCT HIS(H) PRO(P) 022921 01093 SYNON T 0.98 0.72 0.84 G 0.02 0.28 0.16 0350 TCT TCG SER(S) SER(S) 023271 01443 NON-SYN T 0.97 1.00 0.99 C 0.03 0.00 0.01 0467 CTT CCT LEU(L) PRO(P) 023382 01554 3' UTR G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 023840 02012 3' UTR - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 024025 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024334 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024621 00000 ------------ C 0.80 0.70 0.75 A 0.20 0.30 0.25 0000 --- --- --- --- 024707 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 025018 00000 ------------ T 0.89 0.76 0.82 A 0.11 0.24 0.18 0000 --- --- --- --- 025400 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025418 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 025670 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 025919 00000 ------------ G 0.70 0.62 0.66 A 0.30 0.38 0.34 0000 --- --- --- --- 025920 00000 ------------ C 0.68 0.62 0.65 A 0.32 0.38 0.35 0000 --- --- --- --- 025947 00000 ------------ C 1.00 0.88 0.94 G 0.00 0.12 0.06 0000 --- --- --- --- 027276 00000 ------------ A 0.70 0.67 0.68 G 0.30 0.33 0.32 0000 --- --- --- --- 027550 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 027586 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027719 00000 ------------ A 0.81 0.59 0.70 G 0.19 0.41 0.30 0000 --- --- --- --- 028759 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 028765 00000 ------------ T 0.82 0.59 0.70 G 0.18 0.41 0.30 0000 --- --- --- --- 028811 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 029083 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 029182 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 029409 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 029624 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 029665 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 029791 00000 ------------ A 0.85 0.55 0.69 G 0.15 0.45 0.31 0000 --- --- --- --- 029857 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 029863 00000 ------------ T 0.68 0.55 0.61 C 0.33 0.45 0.39 0000 --- --- --- --- 030233 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 030361 00000 ------------ G 0.93 0.98 0.96 A 0.07 0.02 0.04 0000 --- --- --- --- 030577 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030675 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030712 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030999 00000 ------------ G 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 031117 00000 ------------ C 0.81 1.00 0.91 A 0.19 0.00 0.09 0000 --- --- --- --- 031617 00000 ------------ A 0.47 0.60 0.54 G 0.53 0.40 0.46 0000 --- --- --- --- 031785 00000 ------------ C 0.89 0.74 0.82 A 0.11 0.26 0.18 0000 --- --- --- --- 031786 00000 ------------ - 0.11 0.26 0.18 + 0.89 0.74 0.82 0000 --- --- --- --- 031866 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 031914 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 031978 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 032050 00000 ------------ T 0.78 0.84 0.81 C 0.22 0.16 0.19 0000 --- --- --- --- 032509 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 033218 00000 ------------ C 0.61 0.41 0.51 A 0.39 0.59 0.49 0000 --- --- --- --- 033285 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 033435 00000 ------------ T 0.62 0.45 0.53 A 0.38 0.55 0.47 0000 --- --- --- --- 033485 00000 ------------ G 0.64 0.45 0.55 A 0.36 0.55 0.45 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002782: G 003077: TTTTC 008338: AAA 023840: T 025400: T 028811: A 031786: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000175 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000264 00000 ------------ - 0.64 0.90 0.77 + 0.36 0.10 0.23 0000 --- --- --- --- 000989 00000 ------------ - 0.07 0.12 0.09 + 0.93 0.88 0.91 0000 --- --- --- --- 002167 00199 5' UTR - 0.85 1.00 0.93 + 0.15 0.00 0.07 0000 --- --- --- --- 002202 00234 5' UTR A 0.69 0.91 0.80 C 0.31 0.09 0.20 0000 --- --- --- --- 002212 00244 5' UTR T 0.69 0.91 0.80 C 0.31 0.09 0.20 0000 --- --- --- --- 002489 00521 5' UTR C 0.87 0.41 0.62 T 0.13 0.59 0.38 0000 --- --- --- --- 003911 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003967 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 004699 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 004732 00000 ------------ G 0.97 0.85 0.91 A 0.03 0.15 0.09 0000 --- --- --- --- 005295 00000 ------------ C 0.75 0.91 0.84 T 0.25 0.09 0.16 0000 --- --- --- --- 005953 00000 ------------ G 0.77 0.91 0.84 A 0.23 0.09 0.16 0000 --- --- --- --- 005970 00000 ------------ G 0.77 0.91 0.84 A 0.23 0.09 0.16 0000 --- --- --- --- 006377 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006398 00000 ------------ C 0.78 0.91 0.84 T 0.22 0.09 0.16 0000 --- --- --- --- 007357 00000 ------------ A 0.75 0.91 0.83 G 0.25 0.09 0.17 0000 --- --- --- --- 007596 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 007818 00000 ------------ G 0.70 0.91 0.80 A 0.30 0.09 0.20 0000 --- --- --- --- 007872 00000 ------------ C 0.76 0.91 0.83 T 0.24 0.09 0.17 0000 --- --- --- --- 008395 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008421 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008853 00000 ------------ A 0.75 1.00 0.88 G 0.25 0.00 0.12 0000 --- --- --- --- 010029 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010542 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011111 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 011205 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011238 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 011620 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011684 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011761 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011884 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012095 00000 ------------ - 0.98 0.87 0.92 + 0.02 0.13 0.08 0000 --- --- --- --- 012098 00000 ------------ - 0.98 0.87 0.92 + 0.02 0.13 0.08 0000 --- --- --- --- 012163 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012446 00000 ------------ G 0.57 0.50 0.53 T 0.43 0.50 0.47 0000 --- --- --- --- 013213 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 013348 00000 ------------ G 0.62 0.50 0.57 A 0.38 0.50 0.43 0000 --- --- --- --- 013438 00000 ------------ - 0.62 0.50 0.56 + 0.38 0.50 0.44 0000 --- --- --- --- 014075 00822 NON-SYN C 0.85 0.98 0.91 G 0.15 0.02 0.09 0058 ACG AGG THR(T) ARG(R) 014093 00840 NON-SYN A 0.81 0.91 0.86 G 0.19 0.09 0.14 0064 CAA CGA GLN(Q) ARG(R) 014927 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015467 00000 ------------ A 1.00 0.90 0.95 G 0.00 0.10 0.05 0000 --- --- --- --- 016330 00000 ------------ C 0.89 0.53 0.72 T 0.11 0.47 0.28 0000 --- --- --- --- 016476 00000 ------------ G 0.61 0.67 0.64 C 0.39 0.33 0.36 0000 --- --- --- --- 016847 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016921 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 017435 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017445 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 017642 00000 ------------ G 0.98 0.87 0.92 C 0.02 0.13 0.08 0000 --- --- --- --- 017691 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 018283 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018739 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018983 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019136 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 019272 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019693 00000 ------------ A 0.93 0.83 0.88 G 0.07 0.17 0.12 0000 --- --- --- --- 019916 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020024 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020489 00000 ------------ C 0.65 0.50 0.59 T 0.35 0.50 0.41 0000 --- --- --- --- 021000 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021191 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 021681 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022275 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 022982 00000 ------------ A 0.93 0.66 0.76 C 0.07 0.34 0.24 0000 --- --- --- --- 023545 00000 ------------ T 0.87 0.86 0.87 C 0.13 0.14 0.13 0000 --- --- --- --- 023669 00000 ------------ A 0.61 0.45 0.53 G 0.39 0.55 0.47 0000 --- --- --- --- 023958 00000 ------------ G 0.61 0.45 0.53 A 0.39 0.55 0.47 0000 --- --- --- --- 023969 00000 ------------ - 0.39 0.55 0.47 + 0.61 0.45 0.53 0000 --- --- --- --- 024437 00000 ------------ A 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 026001 01088 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0147 GAG AAG GLU(E) LYS(K) 026106 01193 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0182 AAA GAA LYS(K) GLU(E) 026134 00000 ------------ G 0.88 0.65 0.76 C 0.12 0.35 0.24 0000 --- --- --- --- 026469 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 026558 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 026634 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 026843 00000 ------------ G 0.83 0.95 0.89 A 0.17 0.05 0.11 0000 --- --- --- --- 027656 00000 ------------ G 0.88 0.64 0.76 A 0.12 0.36 0.24 0000 --- --- --- --- 028664 00000 ------------ C 0.98 0.76 0.88 T 0.02 0.24 0.12 0000 --- --- --- --- 028696 00000 ------------ T 0.73 0.72 0.72 C 0.27 0.28 0.28 0000 --- --- --- --- 029349 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029398 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 029572 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029629 00000 ------------ C 0.86 0.65 0.76 A 0.14 0.35 0.24 0000 --- --- --- --- 029734 00000 ------------ A 0.82 0.47 0.65 G 0.18 0.53 0.35 0000 --- --- --- --- 030165 00000 ------------ C 0.87 0.83 0.85 T 0.13 0.17 0.15 0000 --- --- --- --- 031772 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031985 00000 ------------ C 0.61 0.61 0.61 T 0.39 0.39 0.39 0000 --- --- --- --- 032879 00000 ------------ G 0.80 0.48 0.63 A 0.20 0.52 0.37 0000 --- --- --- --- 033006 00000 ------------ C 0.81 0.48 0.65 T 0.19 0.52 0.35 0000 --- --- --- --- 033076 00000 ------------ A 0.81 0.48 0.65 G 0.19 0.52 0.35 0000 --- --- --- --- 033093 00000 ------------ A 0.81 0.48 0.65 G 0.19 0.52 0.35 0000 --- --- --- --- 033379 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033904 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034328 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034336 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 034345 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 034441 00000 ------------ - 0.81 1.00 0.90 + 0.19 0.00 0.10 0000 --- --- --- --- 035065 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035078 00000 ------------ G 0.83 0.48 0.66 A 0.17 0.52 0.34 0000 --- --- --- --- 035197 00000 ------------ T 0.83 0.48 0.66 C 0.17 0.52 0.34 0000 --- --- --- --- 035582 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035636 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 035638 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 035664 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 035839 00000 ------------ A 0.74 0.48 0.61 T 0.26 0.52 0.39 0000 --- --- --- --- 036023 01627 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0326 CCG CCA PRO(P) PRO(P) 036160 01764 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 036277 01881 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 036476 02080 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 036483 02087 3' UTR T 0.83 0.48 0.65 C 0.17 0.52 0.35 0000 --- --- --- --- 036797 00000 ------------ G 0.86 0.64 0.74 A 0.14 0.36 0.26 0000 --- --- --- --- 036800 00000 ------------ G 0.95 0.91 0.93 A 0.05 0.09 0.07 0000 --- --- --- --- 036927 00000 ------------ A 0.83 1.00 0.92 G 0.17 0.00 0.08 0000 --- --- --- --- 037012 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037120 00000 ------------ A 0.78 0.48 0.61 G 0.22 0.52 0.39 0000 --- --- --- --- 037728 00000 ------------ C 0.80 0.97 0.87 T 0.20 0.03 0.13 0000 --- --- --- --- 038147 00000 ------------ A 0.80 0.47 0.65 G 0.20 0.53 0.35 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000264: G 000989: A 002167: G 012095: CA 012098: ACA 013438: GTGTGTTT 017445: AG 023969: TACTGGCAT 034441: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000684 00000 ------------ C 0.54 0.85 0.69 T 0.46 0.15 0.31 0000 --- --- --- --- 000805 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000996 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 001389 00000 ------------ T 0.93 0.98 0.96 C 0.07 0.02 0.04 0000 --- --- --- --- 001832 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002697 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002851 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003016 00000 ------------ C 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 004560 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004788 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004796 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 004898 00000 ------------ A 0.93 0.87 0.90 G 0.07 0.13 0.10 0000 --- --- --- --- 004910 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 005453* 005868 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006349 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006381 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006479 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006654 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007601 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 008127 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008587 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 008618 00000 ------------ G 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 011202 00000 ------------ T 0.74 0.68 0.71 A 0.26 0.32 0.29 0000 --- --- --- --- 011619 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011829 00000 ------------ G 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 012127 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012180 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012275 00000 ------------ T 0.82 0.70 0.76 A 0.18 0.30 0.24 0000 --- --- --- --- 012658 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 013275 00000 ------------ G 0.65 0.70 0.67 A 0.35 0.30 0.33 0000 --- --- --- --- 016949 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016976 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017162 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017426 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017438 00000 ------------ A 0.77 0.72 0.74 G 0.23 0.28 0.26 0000 --- --- --- --- 017659 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018131 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018345 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 018875 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018991 00000 ------------ A 0.65 0.70 0.67 G 0.35 0.30 0.33 0000 --- --- --- --- 023570 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 023626 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 024233 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024407 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024595 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024853 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 025238 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025473 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028394 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029070 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029162 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 029179 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 029606 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029751 00000 ------------ C 0.72 0.61 0.66 T 0.28 0.39 0.34 0000 --- --- --- --- 030440 00000 ------------ G 1.00 0.85 0.93 A 0.00 0.15 0.07 0000 --- --- --- --- 030577 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035235 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 035399 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 037141 00000 ------------ G 0.83 0.65 0.74 T 0.17 0.35 0.26 0000 --- --- --- --- 037259 00000 ------------ C 0.83 0.65 0.74 T 0.17 0.35 0.26 0000 --- --- --- --- 037356 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 039642 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040189 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 040396 00000 ------------ A 0.72 0.63 0.67 G 0.28 0.37 0.33 0000 --- --- --- --- 040853 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 041038 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041420 00000 ------------ T 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 041664 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 045481 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 045756 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 046428 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 050207 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 051367 00000 ------------ G 0.71 0.63 0.67 A 0.29 0.37 0.33 0000 --- --- --- --- 051419 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 052298 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 055901 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 055984 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 056246 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 056689 00000 ------------ G 0.83 0.65 0.74 A 0.17 0.35 0.26 0000 --- --- --- --- 056891 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 057032 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 057044 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 061405 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 061956 00000 ------------ C 0.71 0.61 0.66 G 0.29 0.39 0.34 0000 --- --- --- --- 062474 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 062571 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 062656 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 062664 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 062738 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 062942 00508 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0115 GCC ACC ALA(A) THR(T) 063032 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 064183 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 064664 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065049 00000 ------------ T 0.92 0.74 0.83 C 0.08 0.26 0.17 0000 --- --- --- --- 065288 00000 ------------ - 0.17 0.35 0.26 + 0.83 0.65 0.74 0000 --- --- --- --- 066022 00000 ------------ G 0.65 0.61 0.63 A 0.35 0.39 0.37 0000 --- --- --- --- 066106 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 066236 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 066375 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 066661 00000 ------------ C 0.93 0.77 0.86 G 0.07 0.23 0.14 0000 --- --- --- --- 067827 00000 ------------ C 0.71 0.63 0.67 T 0.29 0.37 0.33 0000 --- --- --- --- 067936 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 068074 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 068164 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 068621 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 069878 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 069986 00000 ------------ A 0.52 0.62 0.57 G 0.48 0.38 0.43 0000 --- --- --- --- 070349 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 070799 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 071038 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 071214 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 071972 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 072004 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 072398 00000 ------------ A 0.57 0.61 0.59 T 0.43 0.39 0.41 0000 --- --- --- --- 072571 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 072893 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 073888 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 073906 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 073936 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 074052 00000 ------------ G 0.72 0.64 0.68 A 0.28 0.36 0.32 0000 --- --- --- --- 074314 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 074422 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 074452 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 074763 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 074775 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 075356 00000 ------------ A 0.82 0.65 0.73 G 0.17 0.35 0.27 0000 --- --- --- --- 075488 00000 ------------ G 0.64 0.70 0.67 A 0.36 0.30 0.33 0000 --- --- --- --- 075828 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 076693 00000 ------------ T 0.90 0.98 0.94 C 0.10 0.02 0.06 0000 --- --- --- --- 077055 00000 ------------ T 0.86 0.64 0.74 G 0.14 0.36 0.26 0000 --- --- --- --- 078011 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 078118 00000 ------------ C 0.93 0.88 0.91 T 0.07 0.12 0.09 0000 --- --- --- --- 079203 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 079773 00000 ------------ G 0.75 0.75 0.75 C 0.25 0.25 0.25 0000 --- --- --- --- 080761 01378 3' UTR - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 080781 01398 3' UTR T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 081020 01637 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 081780 02397 3' UTR T 0.67 0.63 0.65 C 0.33 0.37 0.35 0000 --- --- --- --- 082726 03343 3' UTR G 0.45 0.55 0.50 A 0.55 0.45 0.50 0000 --- --- --- --- 083981 04598 3' UTR A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 084117 04734 3' UTR T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 084488 05105 3' UTR - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 084500 05117 3' UTR A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 084546 05163 3' UTR T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 085212 05829 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 085515 06132 3' UTR A 0.65 0.55 0.60 T 0.35 0.45 0.40 0000 --- --- --- --- 086103 06720 3' UTR G 0.91 0.87 0.89 A 0.09 0.13 0.11 0000 --- --- --- --- 086394 07011 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 086443 07060 3' UTR G 0.91 0.87 0.89 C 0.09 0.13 0.11 0000 --- --- --- --- 087212 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 087497 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 087923 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 088481 00000 ------------ C 0.59 0.54 0.57 T 0.41 0.46 0.43 0000 --- --- --- --- 088496 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004796: G 028394: T 045481: TTC 065288: TTC 068074: A 068164: CTTA 080761: AA 084488: T 087212: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 005453 A 0.00 0.02 0.01 C 0.96 0.93 0.95 T 0.04 0.04 0.04 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000276 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004521 00000 ------------ G 0.84 0.57 0.71 A 0.16 0.42 0.29 0000 --- --- --- --- 004907 00000 ------------ T 0.94 0.85 0.89 A 0.06 0.15 0.11 0000 --- --- --- --- 005179 00000 ------------ A 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 005550 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 005571 00000 ------------ T 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 005656 00000 ------------ C 0.50 0.65 0.58 G 0.50 0.35 0.42 0000 --- --- --- --- 005735 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005770 00000 ------------ C 0.95 0.85 0.90 T 0.05 0.15 0.10 0000 --- --- --- --- 005797 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 006164 00000 ------------ T 0.46 0.68 0.57 C 0.54 0.32 0.43 0000 --- --- --- --- 006487 00000 ------------ T 0.73 0.62 0.67 C 0.27 0.38 0.33 0000 --- --- --- --- 006545 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 006588 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006716 00000 ------------ G 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 006824 00000 ------------ G 0.87 0.91 0.89 A 0.13 0.09 0.11 0000 --- --- --- --- 007575 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007674 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 007737 00000 ------------ C 0.76 0.87 0.82 T 0.24 0.13 0.18 0000 --- --- --- --- 007780 00000 ------------ C 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 007882 00784 SYNON C 0.96 1.00 0.98 G 0.04 0.00 0.02 0078 GCC GCG ALA(A) ALA(A) 008513 01122 3' UTR C 0.98 0.84 0.92 T 0.02 0.16 0.08 0000 --- --- --- --- 008544 01153 3' UTR G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007674: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001145 00000 ------------ G 0.44 0.75 0.58 A 0.56 0.25 0.42 0000 --- --- --- --- 002844 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002922 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003108 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003140 00000 ------------ T 0.80 0.45 0.63 G 0.20 0.55 0.37 0000 --- --- --- --- 003151 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003219 00000 ------------ A 0.74 0.95 0.85 T 0.26 0.05 0.15 0000 --- --- --- --- 003377 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003620 00000 ------------ G 0.93 0.84 0.89 A 0.07 0.16 0.11 0000 --- --- --- --- 004277 00000 ------------ A 0.71 0.96 0.84 G 0.29 0.04 0.16 0000 --- --- --- --- 004460 00000 ------------ T 0.78 0.80 0.79 G 0.23 0.20 0.21 0000 --- --- --- --- 004906 00000 ------------ - 0.14 0.52 0.34 + 0.86 0.48 0.66 0000 --- --- --- --- 004918 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 005850 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 005984 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006358 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006474 00000 ------------ A 0.91 0.89 0.90 G 0.09 0.11 0.10 0000 --- --- --- --- 006503 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 006582 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006590 00000 ------------ G 0.65 0.80 0.73 A 0.35 0.20 0.27 0000 --- --- --- --- 006636 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 006731 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006775 -----** NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0106 AGC ATC SER(S) ILE(I) 006792 -----** NON-SYN C 0.93 1.00 0.97 A 0.07 0.00 0.03 0112 CCG ACG PRO(P) THR(T) 006831 -----** NON-SYN T 0.80 0.37 0.59 G 0.20 0.63 0.41 0125 TTC GTC PHE(F) VAL(V) 006906 -----** NON-SYN G 0.59 0.83 0.71 A 0.41 0.17 0.29 0150 GCT ACT ALA(A) THR(T) 006914 -----** SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0152 CTC CTT LEU(L) LEU(L) 006929 -----** SYNON C 1.00 0.93 0.97 T 0.00 0.07 0.03 0157 CAC CAT HIS(H) HIS(H) 007138 00000 ------------ C 0.95 0.82 0.89 T 0.05 0.18 0.11 0000 --- --- --- --- 007171 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 007273 00000 ------------ G 0.82 0.91 0.87 A 0.17 0.09 0.13 0000 --- --- --- --- 007499 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007601 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007667* 007738 00000 ------------ - 0.04 0.20 0.12 + 0.96 0.80 0.88 0000 --- --- --- --- 008071 -----** 3' UTR G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 008306 -----** 3' UTR A 0.81 0.37 0.60 G 0.19 0.63 0.40 0000 --- --- --- --- 008402 00000 ------------ A 0.56 0.70 0.63 G 0.44 0.30 0.37 0000 --- --- --- --- 008727 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 008738 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009047 00000 ------------ G 0.63 0.70 0.67 C 0.37 0.30 0.33 0000 --- --- --- --- 009065 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 009066 00000 ------------ G 0.67 0.48 0.58 A 0.33 0.52 0.42 0000 --- --- --- --- 009073 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009123 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009154 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009156 00000 ------------ T 0.74 0.50 0.62 C 0.26 0.50 0.38 0000 --- --- --- --- 009164 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 009176 00000 ------------ A 0.70 0.82 0.76 C 0.30 0.18 0.24 0000 --- --- --- --- 009200 00000 ------------ T 0.57 0.70 0.64 C 0.43 0.30 0.36 0000 --- --- --- --- 009435 00000 ------------ G 0.52 0.68 0.60 A 0.48 0.32 0.40 0000 --- --- --- --- 009578 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009608 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010065 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 010070 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 010416 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010457 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010566 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010585 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010752 00000 ------------ - 0.09 0.14 0.11 + 0.91 0.86 0.89 0000 --- --- --- --- 010946 00000 ------------ - 0.05 0.00 0.03 + 0.95 1.00 0.97 0000 --- --- --- --- 011214 00000 ------------ T 0.76 0.70 0.73 C 0.24 0.30 0.27 0000 --- --- --- --- 011893 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 012123 00000 ------------ C 0.69 0.87 0.78 A 0.31 0.13 0.22 0000 --- --- --- --- 012379 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012740 00000 ------------ G 0.40 0.77 0.54 T 0.60 0.23 0.46 0000 --- --- --- --- 013491 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013767 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014113 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014180 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 015398 00000 ------------ G 0.46 0.85 0.65 A 0.54 0.15 0.35 0000 --- --- --- --- 016145 00000 ------------ C 0.53 0.70 0.64 G 0.47 0.30 0.36 0000 --- --- --- --- 016159 00000 ------------ G 0.77 1.00 0.91 A 0.23 0.00 0.09 0000 --- --- --- --- 016662 00000 ------------ C 0.62 0.83 0.73 T 0.38 0.17 0.27 0000 --- --- --- --- 016722 00000 ------------ G 0.95 0.98 0.96 A 0.05 0.02 0.04 0000 --- --- --- --- 017623 00000 ------------ C 0.84 0.77 0.81 T 0.16 0.23 0.19 0000 --- --- --- --- 017649 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017793 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017801 00000 ------------ G 0.88 0.57 0.72 A 0.12 0.43 0.28 0000 --- --- --- --- 017823 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 017875 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 017909 00000 ------------ C 0.88 0.57 0.71 T 0.12 0.43 0.29 0000 --- --- --- --- 017910 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 018184 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 018199 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 018214 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 018288 00000 ------------ C 0.98 0.93 0.95 T 0.02 0.07 0.05 0000 --- --- --- --- 018497 00000 ------------ G 0.83 0.75 0.79 T 0.17 0.25 0.21 0000 --- --- --- --- 018606 00000 ------------ C 0.93 0.95 0.94 T 0.07 0.05 0.06 0000 --- --- --- --- 018645 00000 ------------ G 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 018707 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018931 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019159 00000 ------------ - 0.15 0.24 0.20 + 0.85 0.76 0.80 0000 --- --- --- --- 019518 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020065 00000 ------------ C 0.84 0.83 0.83 T 0.16 0.17 0.17 0000 --- --- --- --- 020089 00000 ------------ C 0.84 0.83 0.83 A 0.16 0.17 0.17 0000 --- --- --- --- 020138 00000 ------------ G 0.95 0.83 0.89 A 0.05 0.17 0.11 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004906: C 006636: C 007171: CTAA 007738: CT 010752: C 010946: A 011893: A 018199: G 019159: CCCTG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 007667 C 0.43 0.31 0.38 G 0.45 0.12 0.31 T 0.12 0.56 0.31 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000719 00000 ------------ A 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 002581 00000 ------------ A 0.85 0.50 0.67 T 0.15 0.50 0.33 0000 --- --- --- --- 002605 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 002636 00000 ------------ - 0.78 1.00 0.90 + 0.22 0.00 0.10 0000 --- --- --- --- 002644 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 002683 00165 5' UTR G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003714 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008216 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 008255 00000 ------------ A 0.36 0.95 0.66 C 0.64 0.05 0.34 0000 --- --- --- --- 008349 00000 ------------ C 0.33 0.95 0.68 T 0.67 0.05 0.33 0000 --- --- --- --- 008755 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008758 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 009057 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009100 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009508 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009606 00000 ------------ G 0.70 0.96 0.83 C 0.30 0.04 0.17 0000 --- --- --- --- 012498 00000 ------------ G 0.35 0.96 0.65 A 0.65 0.04 0.35 0000 --- --- --- --- 013627 00000 ------------ G 0.95 0.73 0.84 T 0.05 0.27 0.16 0000 --- --- --- --- 013882 00000 ------------ A 0.30 0.91 0.66 G 0.70 0.09 0.34 0000 --- --- --- --- 014463 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 018383 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 018524 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 018711 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 019700 00000 ------------ G 0.27 0.91 0.59 A 0.73 0.09 0.41 0000 --- --- --- --- 019769 00000 ------------ C 0.69 0.96 0.82 T 0.31 0.04 0.18 0000 --- --- --- --- 019876 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020531 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020875 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020972 00000 ------------ G 0.30 0.95 0.62 A 0.70 0.05 0.38 0000 --- --- --- --- 021127 00000 ------------ G 0.37 0.95 0.68 A 0.63 0.05 0.32 0000 --- --- --- --- 021217 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 021556 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 025069 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 025070 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025151 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025237 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028744 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 028979 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029125 00000 ------------ A 0.29 0.91 0.65 G 0.71 0.09 0.35 0000 --- --- --- --- 029354 00000 ------------ G 0.37 0.95 0.67 A 0.63 0.05 0.33 0000 --- --- --- --- 029559 00000 ------------ G 0.81 1.00 0.91 A 0.19 0.00 0.09 0000 --- --- --- --- 029642 00000 ------------ T 0.36 0.95 0.68 G 0.64 0.05 0.32 0000 --- --- --- --- 029800 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030282 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030487 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030682 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030784 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030981 00000 ------------ C 0.34 0.91 0.68 T 0.66 0.09 0.32 0000 --- --- --- --- 035136 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035393 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 035754 00000 ------------ C 0.97 0.97 0.97 T 0.03 0.03 0.03 0000 --- --- --- --- 036666 00000 ------------ G 0.74 0.95 0.84 C 0.26 0.05 0.16 0000 --- --- --- --- 036748 00000 ------------ G 0.38 0.95 0.65 A 0.62 0.05 0.35 0000 --- --- --- --- 036884 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036942 00657 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0160 TTA TTG LEU(L) LEU(L) 037118 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 038331 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 038696 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039172 00000 ------------ G 0.33 0.96 0.64 C 0.67 0.04 0.36 0000 --- --- --- --- 045096 00000 ------------ G 0.31 0.95 0.64 C 0.69 0.05 0.36 0000 --- --- --- --- 045390 00000 ------------ G 0.35 0.90 0.62 A 0.65 0.10 0.38 0000 --- --- --- --- 046293 00000 ------------ - 0.34 0.96 0.66 + 0.66 0.04 0.34 0000 --- --- --- --- 046372 00000 ------------ G 0.93 0.83 0.87 A 0.07 0.17 0.13 0000 --- --- --- --- 046756 00000 ------------ G 1.00 0.88 0.94 T 0.00 0.12 0.06 0000 --- --- --- --- 047156 00000 ------------ G 0.75 0.96 0.86 A 0.25 0.04 0.14 0000 --- --- --- --- 047517 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 048382 00000 ------------ T 0.33 0.94 0.59 A 0.67 0.06 0.41 0000 --- --- --- --- 048464 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 048622 00000 ------------ G 0.72 0.94 0.81 A 0.28 0.06 0.19 0000 --- --- --- --- 050308 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 050545 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 050995 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 051181 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 051211 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 051414 01837 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0554 CGG TGG ARG(R) TRP(W) 051890 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 051985 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 053164 00000 ------------ G 0.95 0.96 0.95 A 0.05 0.04 0.05 0000 --- --- --- --- 053408 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 053527 00000 ------------ T 0.24 0.96 0.65 C 0.76 0.04 0.35 0000 --- --- --- --- 055823 00000 ------------ C 0.93 0.96 0.94 T 0.07 0.04 0.06 0000 --- --- --- --- 057296 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 059283 00000 ------------ G 0.28 0.90 0.61 A 0.72 0.10 0.39 0000 --- --- --- --- 059332 00000 ------------ C 0.31 0.95 0.65 T 0.69 0.05 0.35 0000 --- --- --- --- 059549 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 059571 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 059659 00000 ------------ C 0.30 0.91 0.61 T 0.70 0.09 0.39 0000 --- --- --- --- 059664 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 060069 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 060234 00000 ------------ G 0.30 0.96 0.63 A 0.70 0.04 0.37 0000 --- --- --- --- 060792 00000 ------------ A 0.80 1.00 0.88 G 0.20 0.00 0.12 0000 --- --- --- --- 061054 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 061132 00000 ------------ G 0.91 0.66 0.80 A 0.09 0.34 0.20 0000 --- --- --- --- 061357 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 061630 02501 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 061823 02694 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002636: T 021556: C 035393: C 046293: T 050995: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000213 00000 ------------ G 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 000245 00000 ------------ C 0.53 0.77 0.65 T 0.47 0.23 0.35 0000 --- --- --- --- 000472 00000 ------------ C 0.50 0.76 0.63 A 0.50 0.24 0.37 0000 --- --- --- --- 000532 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000635 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001498 00000 ------------ C 0.61 0.54 0.58 T 0.39 0.46 0.42 0000 --- --- --- --- 001568 00000 ------------ G 0.50 0.74 0.62 T 0.50 0.26 0.38 0000 --- --- --- --- 001833 00000 ------------ G 0.64 0.55 0.59 T 0.36 0.45 0.41 0000 --- --- --- --- 001927 00000 ------------ A 0.94 0.90 0.92 C 0.06 0.10 0.08 0000 --- --- --- --- 002018 00000 ------------ G 0.50 0.74 0.62 T 0.50 0.26 0.38 0000 --- --- --- --- 002220 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002234 00000 ------------ G 0.50 0.76 0.62 A 0.50 0.24 0.38 0000 --- --- --- --- 002646 00000 ------------ C 0.52 0.78 0.65 T 0.48 0.22 0.35 0000 --- --- --- --- 002767 00000 ------------ A 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 002802 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002911 00000 ------------ G 0.94 0.78 0.86 T 0.06 0.22 0.14 0000 --- --- --- --- 003166 00000 ------------ C 0.65 0.54 0.60 G 0.35 0.46 0.40 0000 --- --- --- --- 003469 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003528 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 003582 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 004467 00000 ------------ G 0.94 0.78 0.86 A 0.06 0.22 0.14 0000 --- --- --- --- 005016 00684 3' UTR T 0.65 0.52 0.59 C 0.35 0.48 0.41 0000 --- --- --- --- 005090 00758 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005244 00912 3' UTR A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005351 01019 3' UTR A 0.85 0.81 0.83 G 0.15 0.19 0.17 0000 --- --- --- --- 005851 01519 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006049 00000 ------------ T 0.64 0.53 0.59 C 0.36 0.47 0.41 0000 --- --- --- --- 006433 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006570 00000 ------------ G 0.67 0.50 0.59 A 0.33 0.50 0.41 0000 --- --- --- --- 006659 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 006831 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006976 00000 ------------ C 0.91 0.77 0.84 T 0.09 0.23 0.16 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000451 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000769 00000 ------------ A 0.68 0.93 0.81 G 0.33 0.07 0.19 0000 --- --- --- --- 000947 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 001201 00000 ------------ C 0.68 0.93 0.80 T 0.33 0.07 0.20 0000 --- --- --- --- 001396 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001965 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002570 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002677 00095 SYNON G 1.00 0.94 0.97 C 0.00 0.06 0.03 0007 GTG GTC VAL(V) VAL(V) 003656 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003659 00000 ------------ C 0.67 0.93 0.80 A 0.33 0.07 0.20 0000 --- --- --- --- 003968 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004193 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 004457 00000 ------------ A 0.73 0.59 0.66 G 0.27 0.41 0.34 0000 --- --- --- --- 004683 00254 SYNON G 0.83 0.93 0.88 A 0.17 0.07 0.12 0060 GCG GCA ALA(A) ALA(A) 004684 00255 NON-SYN C 0.98 1.00 0.99 G 0.02 0.00 0.01 0061 CTC GTC LEU(L) VAL(V) 005103 00000 ------------ C 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 005336 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005399 00000 ------------ C 0.55 0.91 0.75 A 0.45 0.09 0.25 0000 --- --- --- --- 005779 00411 NON-SYN G 1.00 0.96 0.98 A 0.00 0.04 0.02 0113 GTC ATC VAL(V) ILE(I) 006056 00000 ------------ G 0.73 0.59 0.66 A 0.27 0.41 0.34 0000 --- --- --- --- 006529 00000 ------------ C 0.67 0.97 0.80 T 0.33 0.03 0.20 0000 --- --- --- --- 006899 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007124 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007318 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 007425 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 007772 00000 ------------ G 0.73 0.59 0.66 A 0.27 0.41 0.34 0000 --- --- --- --- 007891 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008049 00000 ------------ T 0.63 0.93 0.78 G 0.37 0.07 0.22 0000 --- --- --- --- 008143 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008394 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008430 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008453 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008506 00000 ------------ G 0.81 0.59 0.70 A 0.19 0.41 0.30 0000 --- --- --- --- 008636 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008723 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008766 00000 ------------ G 0.79 0.93 0.85 A 0.21 0.07 0.15 0000 --- --- --- --- 008932 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009204 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009291 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009303 00000 ------------ T 0.67 0.48 0.57 C 0.33 0.52 0.43 0000 --- --- --- --- 009320 00000 ------------ C 0.79 0.93 0.86 T 0.21 0.07 0.14 0000 --- --- --- --- 009339 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009362 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009412 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009521 00533 SYNON G 0.52 0.50 0.51 A 0.48 0.50 0.49 0153 GCG GCA ALA(A) ALA(A) 009537 00549 NON-SYN A 0.98 0.72 0.85 G 0.02 0.28 0.15 0159 AGC GGC SER(S) GLY(G) 010285 00709 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0212 CGA CAA ARG(R) GLN(Q) 010435 00000 ------------ G 0.73 1.00 0.84 C 0.27 0.00 0.16 0000 --- --- --- --- 010940 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011333 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011508 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011572 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 011785 00770 SYNON C 1.00 0.94 0.98 T 0.00 0.06 0.02 0232 ACC ACT THR(T) THR(T) 012290 00000 ------------ G 1.00 0.94 0.98 C 0.00 0.06 0.02 0000 --- --- --- --- 012343 00000 ------------ T 0.94 0.94 0.94 G 0.06 0.06 0.06 0000 --- --- --- --- 012352 00000 ------------ G 1.00 0.94 0.98 C 0.00 0.06 0.02 0000 --- --- --- --- 012458 00000 ------------ C 0.94 0.97 0.95 G 0.06 0.03 0.05 0000 --- --- --- --- 012482 00000 ------------ G 0.81 0.70 0.76 A 0.19 0.30 0.24 0000 --- --- --- --- 012661 00000 ------------ C 0.88 0.95 0.91 T 0.12 0.05 0.09 0000 --- --- --- --- 012663 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012791 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 012871 00000 ------------ C 0.58 0.68 0.63 T 0.42 0.32 0.37 0000 --- --- --- --- 013006 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013051 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 013067 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 013716 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013991 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 014028 00000 ------------ G 0.98 0.88 0.94 A 0.02 0.12 0.06 0000 --- --- --- --- 014112 00000 ------------ G 0.88 0.91 0.89 A 0.12 0.09 0.11 0000 --- --- --- --- 014693 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014845 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015065 01046 SYNON C 0.88 1.00 0.94 T 0.12 0.00 0.06 0324 ACC ACT THR(T) THR(T) 015144 01125 NON-SYN G 0.82 0.67 0.74 A 0.18 0.33 0.26 0351 GGG AGG GLY(G) ARG(R) 015251 01232 SYNON C 0.98 1.00 0.99 G 0.02 0.00 0.01 0386 ACC ACG THR(T) THR(T) 015352 01333 NON-SYN C 1.00 0.91 0.96 T 0.00 0.09 0.04 0420 TCG TTG SER(S) LEU(L) 015937 01918 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016184 02165 3' UTR T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 017178 03159 3' UTR G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 017242 03223 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017560 03541 3' UTR A 0.69 0.50 0.60 G 0.31 0.50 0.40 0000 --- --- --- --- 018018 00000 ------------ G 0.77 0.71 0.74 T 0.23 0.29 0.26 0000 --- --- --- --- 018208 00000 ------------ C 0.77 0.68 0.73 T 0.23 0.32 0.27 0000 --- --- --- --- 018237 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018522 00000 ------------ C 0.81 0.67 0.74 A 0.19 0.33 0.26 0000 --- --- --- --- 018619 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 018703 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018846 00000 ------------ G 0.80 0.67 0.74 A 0.20 0.33 0.26 0000 --- --- --- --- 019233 00000 ------------ T 0.92 1.00 0.95 C 0.08 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005336: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000341 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 000607 00000 ------------ G 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 000654 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000694 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001395 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002050 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002201 00000 ------------ T 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 002302 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002425 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002439 00000 ------------ C 0.85 0.74 0.79 T 0.15 0.26 0.21 0000 --- --- --- --- 002655 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 003258 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003267 00000 ------------ A 0.54 0.73 0.63 G 0.46 0.27 0.37 0000 --- --- --- --- 003338 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003345 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 003432 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003725 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 003858 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003915 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004078 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004112 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004333 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004692 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004714 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004741 00000 ------------ A 0.98 0.97 0.98 G 0.02 0.03 0.02 0000 --- --- --- --- 004845 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004994 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005037 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005197 00238 NON-SYN A 0.82 0.60 0.71 G 0.18 0.40 0.29 0047 AAA GAA LYS(K) GLU(E) 005320 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005327 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005378 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005863 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005904 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 006071 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006213 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006223 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006468 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 006566 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 007623 00000 ------------ C 0.76 0.61 0.68 A 0.24 0.39 0.32 0000 --- --- --- --- 007648 00000 ------------ - 1.00 0.87 0.93 + 0.00 0.13 0.07 0000 --- --- --- --- 008490 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 008494 00000 ------------ G 0.80 0.72 0.76 T 0.20 0.28 0.24 0000 --- --- --- --- 008648 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 008727 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 008861 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009105 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 009161 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009310 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 009847 00000 ------------ C 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 009848 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010021 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 010097 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 010113 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 010323 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010770 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010831 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 011836 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 012509 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012531 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 012537 00000 ------------ A 0.67 0.70 0.68 C 0.33 0.30 0.32 0000 --- --- --- --- 012678 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 012931 00000 ------------ G 0.75 0.70 0.72 A 0.25 0.30 0.28 0000 --- --- --- --- 012937 00000 ------------ A 0.67 0.70 0.68 C 0.33 0.30 0.32 0000 --- --- --- --- 013126 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 013222 00000 ------------ C 0.69 0.70 0.69 T 0.31 0.30 0.31 0000 --- --- --- --- 013229 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 013538 00000 ------------ G 0.69 0.70 0.69 A 0.31 0.30 0.31 0000 --- --- --- --- 013752 00000 ------------ A 0.92 0.85 0.88 G 0.08 0.15 0.12 0000 --- --- --- --- 013773 00000 ------------ - 0.25 0.30 0.28 + 0.75 0.70 0.72 0000 --- --- --- --- 014221 00000 ------------ A 0.70 0.65 0.68 G 0.30 0.35 0.32 0000 --- --- --- --- 014305 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014356 00000 ------------ C 0.73 0.70 0.72 T 0.27 0.30 0.28 0000 --- --- --- --- 014364 00000 ------------ T 0.94 0.98 0.96 C 0.06 0.02 0.04 0000 --- --- --- --- 014388 00000 ------------ - 0.67 0.70 0.68 + 0.33 0.30 0.32 0000 --- --- --- --- 014389 00000 ------------ - 0.79 0.84 0.82 + 0.21 0.16 0.18 0000 --- --- --- --- 014756 00000 ------------ - 0.92 0.91 0.91 + 0.08 0.09 0.09 0000 --- --- --- --- 015151 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015209 00000 ------------ A 0.81 0.63 0.72 G 0.19 0.37 0.28 0000 --- --- --- --- 015264 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015267 00000 ------------ C 0.70 0.65 0.67 T 0.30 0.35 0.33 0000 --- --- --- --- 015316 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 015671 00000 ------------ T 0.80 0.48 0.64 C 0.20 0.52 0.36 0000 --- --- --- --- 015938 00000 ------------ T 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 016146 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 016210 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 016211 00000 ------------ G 0.62 1.00 0.80 A 0.38 0.00 0.20 0000 --- --- --- --- 016282 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 016323 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 016381 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 016781 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 016875 00000 ------------ T 0.75 0.50 0.63 C 0.25 0.50 0.37 0000 --- --- --- --- 017093 00000 ------------ C 0.70 1.00 0.85 T 0.30 0.00 0.15 0000 --- --- --- --- 017105 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 017299 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017339 00000 ------------ T 0.57 0.50 0.53 G 0.43 0.50 0.47 0000 --- --- --- --- 017376 00000 ------------ T 0.57 0.50 0.53 C 0.43 0.50 0.47 0000 --- --- --- --- 017648 00000 ------------ A 0.54 0.50 0.52 T 0.46 0.50 0.48 0000 --- --- --- --- 017711 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018084 00000 ------------ A 0.54 0.50 0.52 G 0.46 0.50 0.48 0000 --- --- --- --- 018245 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018268 00000 ------------ A 0.54 0.50 0.52 C 0.46 0.50 0.48 0000 --- --- --- --- 018314 00000 ------------ T 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 018368 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 018440 00000 ------------ C 0.54 0.50 0.52 T 0.46 0.50 0.48 0000 --- --- --- --- 018452 00000 ------------ C 0.54 0.50 0.52 T 0.46 0.50 0.48 0000 --- --- --- --- 018467 00000 ------------ T 0.54 0.50 0.52 C 0.46 0.50 0.48 0000 --- --- --- --- 018847 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018855 00000 ------------ - 0.55 0.50 0.52 + 0.45 0.50 0.48 0000 --- --- --- --- 018917 00000 ------------ A 0.55 0.50 0.52 G 0.45 0.50 0.48 0000 --- --- --- --- 018953 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019153 00000 ------------ G 0.93 0.89 0.91 A 0.07 0.11 0.09 0000 --- --- --- --- 019335 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019369 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 019686 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020041 00000 ------------ A 0.73 1.00 0.86 G 0.27 0.00 0.14 0000 --- --- --- --- 020342 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020488 00000 ------------ C 0.57 0.54 0.55 T 0.43 0.46 0.45 0000 --- --- --- --- 020512 00000 ------------ - 0.57 0.54 0.55 + 0.43 0.46 0.45 0000 --- --- --- --- 020571 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 020756 00000 ------------ C 0.67 0.45 0.54 T 0.33 0.55 0.46 0000 --- --- --- --- 020768 00000 ------------ C 0.67 0.55 0.59 T 0.33 0.45 0.41 0000 --- --- --- --- 020794 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 021036 00000 ------------ G 0.76 0.45 0.61 A 0.24 0.55 0.39 0000 --- --- --- --- 021071 00000 ------------ G 0.76 0.45 0.61 A 0.24 0.55 0.39 0000 --- --- --- --- 021437 00000 ------------ A 0.75 0.45 0.61 C 0.25 0.55 0.39 0000 --- --- --- --- 021543 00000 ------------ G 0.77 0.50 0.64 A 0.23 0.50 0.36 0000 --- --- --- --- 021569 00000 ------------ T 0.77 0.50 0.64 A 0.23 0.50 0.36 0000 --- --- --- --- 021834 00000 ------------ G 0.78 0.50 0.64 A 0.22 0.50 0.36 0000 --- --- --- --- 022099 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022105 00000 ------------ T 0.77 0.46 0.62 C 0.23 0.54 0.38 0000 --- --- --- --- 022224 00000 ------------ A 0.76 0.50 0.63 G 0.24 0.50 0.37 0000 --- --- --- --- 022248 00000 ------------ G 0.76 0.50 0.63 T 0.24 0.50 0.37 0000 --- --- --- --- 022249 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 022454 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022784 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 022826 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 022865 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 022945 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 022966 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023162 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023404 00000 ------------ - 0.78 0.43 0.61 + 0.22 0.57 0.39 0000 --- --- --- --- 023456 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023713 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023815 00000 ------------ G 0.57 0.55 0.56 A 0.43 0.45 0.44 0000 --- --- --- --- 023869 00000 ------------ C 0.52 0.54 0.53 G 0.48 0.46 0.47 0000 --- --- --- --- 024078 00000 ------------ - 0.35 0.46 0.40 + 0.65 0.54 0.60 0000 --- --- --- --- 024106 00000 ------------ C 0.91 0.68 0.79 T 0.09 0.32 0.21 0000 --- --- --- --- 024291 00000 ------------ C 0.77 0.41 0.60 T 0.23 0.59 0.40 0000 --- --- --- --- 024424 00000 ------------ T 0.67 0.54 0.61 C 0.33 0.46 0.39 0000 --- --- --- --- 024615 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 025107 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025180 00000 ------------ - 0.67 0.46 0.57 + 0.33 0.54 0.43 0000 --- --- --- --- 025217 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025234 00000 ------------ T 0.70 0.48 0.59 G 0.30 0.52 0.41 0000 --- --- --- --- 025240 00000 ------------ T 0.70 0.48 0.59 C 0.30 0.52 0.41 0000 --- --- --- --- 025335 00000 ------------ A 0.76 0.46 0.61 G 0.24 0.54 0.39 0000 --- --- --- --- 025414 00000 ------------ A 0.67 0.41 0.54 G 0.33 0.59 0.46 0000 --- --- --- --- 025421 00000 ------------ A 0.65 0.46 0.55 C 0.35 0.54 0.45 0000 --- --- --- --- 025579 00000 ------------ A 0.70 0.46 0.58 G 0.30 0.54 0.42 0000 --- --- --- --- 025607 00000 ------------ T 0.67 0.46 0.57 G 0.33 0.54 0.43 0000 --- --- --- --- 025856 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 025888 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 026063 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026195 00000 ------------ C 0.67 0.48 0.58 T 0.33 0.52 0.42 0000 --- --- --- --- 026217 00000 ------------ C 0.67 0.48 0.58 T 0.33 0.52 0.42 0000 --- --- --- --- 026227 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 026365 00000 ------------ A 0.69 0.46 0.57 G 0.31 0.54 0.43 0000 --- --- --- --- 026717 00000 ------------ G 0.79 0.46 0.63 A 0.21 0.54 0.37 0000 --- --- --- --- 026738 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 026747 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026808 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 026888 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026899 00000 ------------ C 0.67 0.46 0.56 T 0.33 0.54 0.44 0000 --- --- --- --- 027146 00000 ------------ G 0.88 0.57 0.73 A 0.12 0.43 0.27 0000 --- --- --- --- 027329 00000 ------------ A 0.70 0.45 0.58 G 0.30 0.55 0.42 0000 --- --- --- --- 027407 00000 ------------ T 0.69 0.45 0.58 C 0.31 0.55 0.42 0000 --- --- --- --- 027552 00000 ------------ A 0.69 0.43 0.56 G 0.31 0.57 0.44 0000 --- --- --- --- 027598 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 027877 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027931 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 028047 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028150 00000 ------------ T 0.70 0.43 0.57 C 0.30 0.57 0.43 0000 --- --- --- --- 028166 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 028252 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028253 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028276 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 028285 00000 ------------ C 0.67 0.43 0.55 T 0.33 0.57 0.45 0000 --- --- --- --- 028379 00000 ------------ G 0.62 0.80 0.71 A 0.38 0.20 0.29 0000 --- --- --- --- 028474 00000 ------------ C 0.69 0.43 0.56 T 0.31 0.57 0.44 0000 --- --- --- --- 028495 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 028948 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029025 00000 ------------ G 0.67 0.43 0.55 A 0.33 0.57 0.45 0000 --- --- --- --- 029074 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029077 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029339 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029399 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 029403 00000 ------------ C 0.67 0.46 0.56 T 0.33 0.54 0.44 0000 --- --- --- --- 029621 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 029656 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 029679 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029739 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029885 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 030089 00000 ------------ C 0.75 0.98 0.87 T 0.25 0.02 0.13 0000 --- --- --- --- 030406 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030441 00000 ------------ G 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 030595 00000 ------------ A 0.98 0.80 0.89 G 0.02 0.20 0.11 0000 --- --- --- --- 030713 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 030811 00000 ------------ G 0.71 0.52 0.62 A 0.29 0.48 0.38 0000 --- --- --- --- 030825 00000 ------------ G 0.98 0.78 0.88 A 0.02 0.22 0.12 0000 --- --- --- --- 030927 00000 ------------ C 0.33 0.70 0.51 T 0.67 0.30 0.49 0000 --- --- --- --- 030990 00000 ------------ T 0.92 0.93 0.93 G 0.08 0.07 0.07 0000 --- --- --- --- 031016 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031827 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 031834 00000 ------------ G 0.73 1.00 0.86 C 0.27 0.00 0.14 0000 --- --- --- --- 031901 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031913 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 031975 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 032161 00000 ------------ T 0.89 0.96 0.92 C 0.11 0.04 0.08 0000 --- --- --- --- 032277 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 033182 01162 3' UTR A 0.67 0.55 0.61 G 0.33 0.45 0.39 0000 --- --- --- --- 033232 01212 3' UTR G 0.90 0.98 0.93 A 0.10 0.02 0.07 0000 --- --- --- --- 033411 01391 3' UTR G 0.98 0.80 0.89 A 0.02 0.20 0.11 0000 --- --- --- --- 033505 01485 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033816 01796 3' UTR G 0.69 0.52 0.61 A 0.31 0.48 0.39 0000 --- --- --- --- 034007 00000 ------------ G 0.98 0.78 0.88 A 0.02 0.22 0.12 0000 --- --- --- --- 034114 00000 ------------ G 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 034356 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 034677 00000 ------------ G 0.43 0.64 0.53 T 0.57 0.36 0.47 0000 --- --- --- --- 034679 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 034680 00000 ------------ G 0.98 0.79 0.88 A 0.02 0.21 0.12 0000 --- --- --- --- 034770 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 034809 00000 ------------ T 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 034906 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 035008 00000 ------------ G 0.73 0.93 0.83 T 0.27 0.07 0.17 0000 --- --- --- --- 035154 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 035251 00000 ------------ G 0.91 0.57 0.74 A 0.09 0.43 0.26 0000 --- --- --- --- 035309 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 035333 00000 ------------ G 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 035349 00000 ------------ A 0.95 0.79 0.87 T 0.05 0.21 0.13 0000 --- --- --- --- 035527 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 035533 00000 ------------ A 0.92 0.57 0.74 T 0.08 0.43 0.26 0000 --- --- --- --- 035563 00000 ------------ C 0.98 0.78 0.88 T 0.02 0.22 0.12 0000 --- --- --- --- 035602 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 035866 00000 ------------ C 0.79 0.78 0.79 T 0.21 0.22 0.21 0000 --- --- --- --- 035963 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035967 00000 ------------ T 0.79 0.78 0.79 C 0.21 0.22 0.21 0000 --- --- --- --- 035974 00000 ------------ C 0.79 0.78 0.79 T 0.21 0.22 0.21 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002655: AGT 003725: C 006213: AAG 007648: TCC 008648: T 010113: A 012678: A 013229: C 013773: GTG 014388: T 014389: C 014756: A 016146: GAG 018855: T 020512: CGGGAGAAGGAA 022826: G 023404: C 023713: G 024078: GTTT 025180: GAAGTCTGAGG 027598: G 029399: AG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000125 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000187 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000357 00000 ------------ T 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 000447 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000509 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 000970* 001671 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003451 00309 SYNON G 0.85 0.54 0.70 A 0.15 0.46 0.30 0082 GCG GCA ALA(A) ALA(A) 003638 00385 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0108 GTG ATG VAL(V) MET(M) 003651 00398 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0112 CGC CAC ARG(R) HIS(H) 003835 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004064 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 004267 00000 ------------ C 0.62 0.61 0.62 T 0.38 0.39 0.38 0000 --- --- --- --- 004802 00000 ------------ C 0.73 0.91 0.82 G 0.27 0.09 0.18 0000 --- --- --- --- 005108 00000 ------------ G 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 005154 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005157 00000 ------------ G 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 005199 00000 ------------ T 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 005288 00000 ------------ G 0.57 0.61 0.59 C 0.43 0.39 0.41 0000 --- --- --- --- 005970 00685 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006068 00783 3' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006077 00792 3' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006092 00807 3' UTR G 0.85 0.80 0.83 A 0.15 0.20 0.17 0000 --- --- --- --- 006212 00927 3' UTR T 0.90 0.80 0.85 G 0.10 0.20 0.15 0000 --- --- --- --- 006448 01163 3' UTR G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 006494 01209 3' UTR G 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 006576 01291 3' UTR G 0.87 0.91 0.89 A 0.13 0.09 0.11 0000 --- --- --- --- 006591 01306 3' UTR G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 006656 01371 3' UTR A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 006669 01384 3' UTR C 0.83 0.80 0.82 G 0.17 0.20 0.18 0000 --- --- --- --- 007083 01798 3' UTR G 0.87 0.78 0.83 A 0.13 0.22 0.17 0000 --- --- --- --- 007161 01876 3' UTR C 0.92 0.93 0.93 A 0.08 0.07 0.07 0000 --- --- --- --- 007249 01964 3' UTR T 0.65 0.71 0.67 C 0.35 0.29 0.33 0000 --- --- --- --- 007904 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 008111 00000 ------------ T 0.73 0.74 0.73 C 0.27 0.26 0.27 0000 --- --- --- --- 008288 00000 ------------ G 0.93 0.93 0.93 A 0.07 0.07 0.07 0000 --- --- --- --- 008337 00000 ------------ G 0.84 0.78 0.81 A 0.16 0.22 0.19 0000 --- --- --- --- 008680 00000 ------------ G 0.93 0.82 0.88 A 0.07 0.18 0.12 0000 --- --- --- --- 008703 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 008790 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009153 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009596 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009670 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009680 00000 ------------ A 0.57 0.81 0.69 G 0.43 0.19 0.31 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 000970 A 0.40 0.48 0.44 C 0.02 0.00 0.01 G 0.58 0.52 0.55 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000278 00000 ------------ G 0.75 0.82 0.78 A 0.25 0.18 0.22 0000 --- --- --- --- 000459 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000967 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000968 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001057 00000 ------------ C 0.98 0.90 0.94 T 0.02 0.10 0.06 0000 --- --- --- --- 001942 00063 5' UTR G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002054 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 002090 00000 ------------ T 0.82 0.44 0.64 G 0.18 0.56 0.36 0000 --- --- --- --- 003384 00000 ------------ C 0.69 0.75 0.72 T 0.31 0.25 0.28 0000 --- --- --- --- 003682 00000 ------------ G 0.84 0.47 0.68 T 0.16 0.53 0.33 0000 --- --- --- --- 003981 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 004106 00000 ------------ - 0.00 0.11 0.05 + 1.00 0.89 0.95 0000 --- --- --- --- 004427 00000 ------------ G 0.98 0.90 0.94 A 0.02 0.10 0.06 0000 --- --- --- --- 004676 00000 ------------ A 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 004715 00258 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0065 CCA ACA PRO(P) THR(T) 005338 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 005343 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 005611 00000 ------------ C 0.74 0.91 0.83 T 0.26 0.09 0.17 0000 --- --- --- --- 005674 00000 ------------ G 0.78 1.00 0.89 C 0.22 0.00 0.11 0000 --- --- --- --- 006022 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006369 00000 ------------ T 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 007361 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007400 00000 ------------ G 0.98 0.90 0.94 T 0.02 0.10 0.06 0000 --- --- --- --- 007510 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008813 01248 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0395 CGG TGG ARG(R) TRP(W) 008901 00000 ------------ - 0.07 0.02 0.05 + 0.93 0.98 0.95 0000 --- --- --- --- 009134 00000 ------------ - 0.02 0.11 0.06 + 0.98 0.89 0.94 0000 --- --- --- --- 009639 01529 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009718 01608 3' UTR - 0.06 0.02 0.04 + 0.94 0.98 0.96 0000 --- --- --- --- 009955 00000 ------------ G 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 010009 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 010392 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010411 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010770 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004106: A 008901: AGA 009134: TATTAGTACTAATACTCTTCCAGGGTATTAG 009718: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000913 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001108 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 001250 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001526 00000 ------------ T 0.94 0.98 0.96 G 0.06 0.02 0.04 0000 --- --- --- --- 001716 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 002651 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002709 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002765 00000 ------------ G 0.69 0.43 0.56 A 0.31 0.57 0.44 0000 --- --- --- --- 003025 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003362 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004071 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004238 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004897 00000 ------------ T 0.81 0.80 0.81 C 0.19 0.20 0.19 0000 --- --- --- --- 004909 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004926 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005071 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 005247 00000 ------------ T 0.73 0.41 0.58 A 0.27 0.59 0.42 0000 --- --- --- --- 005344 00000 ------------ C 0.72 0.37 0.56 A 0.28 0.63 0.44 0000 --- --- --- --- 005571 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 005574 00000 ------------ G 0.76 0.78 0.77 C 0.24 0.22 0.23 0000 --- --- --- --- 005636 00000 ------------ A 0.89 0.45 0.68 G 0.11 0.55 0.32 0000 --- --- --- --- 005757 00000 ------------ G 0.83 1.00 0.90 A 0.17 0.00 0.10 0000 --- --- --- --- 006229 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006238 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 007300 00000 ------------ T 0.69 0.43 0.56 G 0.31 0.57 0.44 0000 --- --- --- --- 007304 00000 ------------ A 0.75 0.78 0.77 C 0.25 0.22 0.23 0000 --- --- --- --- 007476 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 007519 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 007824 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008241 00000 ------------ G 0.52 0.79 0.64 C 0.48 0.21 0.36 0000 --- --- --- --- 008335 00000 ------------ T 0.93 0.98 0.96 C 0.07 0.02 0.04 0000 --- --- --- --- 009094 00000 ------------ T 0.80 0.76 0.78 C 0.20 0.24 0.22 0000 --- --- --- --- 009352 00000 ------------ - 0.54 0.81 0.67 + 0.46 0.19 0.33 0000 --- --- --- --- 009599 00000 ------------ A 0.52 0.78 0.65 T 0.48 0.22 0.35 0000 --- --- --- --- 009656 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009796 00000 ------------ T 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 009808 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 009848 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010051 00000 ------------ G 0.35 0.78 0.58 A 0.65 0.22 0.42 0000 --- --- --- --- 010277 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010322 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 010509 00000 ------------ A 0.93 0.84 0.88 G 0.07 0.16 0.12 0000 --- --- --- --- 010638 00000 ------------ A 0.35 0.78 0.57 G 0.65 0.22 0.43 0000 --- --- --- --- 010663 00000 ------------ T 0.93 0.80 0.87 C 0.07 0.20 0.13 0000 --- --- --- --- 010803 00000 ------------ A 0.89 0.43 0.66 G 0.11 0.57 0.34 0000 --- --- --- --- 010964 00000 ------------ C 0.38 0.78 0.57 T 0.62 0.22 0.43 0000 --- --- --- --- 011257 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011273 00000 ------------ A 0.38 0.80 0.58 T 0.62 0.20 0.42 0000 --- --- --- --- 011359 00000 ------------ A 0.38 0.80 0.58 C 0.62 0.20 0.42 0000 --- --- --- --- 011494 00000 ------------ G 1.00 0.85 0.93 A 0.00 0.15 0.07 0000 --- --- --- --- 011500 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011604 00000 ------------ G 0.38 0.78 0.57 A 0.62 0.22 0.43 0000 --- --- --- --- 011654 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001716: TGGGAG 009352: A 010322: TCGC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000136 00000 ------------ + 0.60 0.78 0.69 - 0.40 0.22 0.31 0000 --- --- --- --- 000356 00000 ------------ G 0.58 0.78 0.68 C 0.42 0.22 0.32 0000 --- --- --- --- 000398 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000755 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 000890 00000 ------------ G 0.57 0.79 0.67 T 0.43 0.21 0.33 0000 --- --- --- --- 001018 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 001025 00000 ------------ G 0.59 0.80 0.69 T 0.41 0.20 0.31 0000 --- --- --- --- 001291 00000 ------------ G 0.56 0.80 0.68 T 0.44 0.20 0.32 0000 --- --- --- --- 002198 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002218 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 002508 00000 ------------ T 0.76 0.68 0.73 A 0.24 0.32 0.27 0000 --- --- --- --- 003216 00000 ------------ G 0.62 0.81 0.72 A 0.38 0.19 0.28 0000 --- --- --- --- 003340 00000 ------------ G 0.64 0.81 0.73 A 0.36 0.19 0.27 0000 --- --- --- --- 003347 00000 ------------ G 0.97 0.93 0.95 A 0.03 0.07 0.05 0000 --- --- --- --- 004010 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004237 00000 ------------ G 0.94 0.76 0.85 A 0.06 0.24 0.15 0000 --- --- --- --- 004246 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 004496 00000 ------------ A 0.69 0.41 0.55 G 0.31 0.59 0.45 0000 --- --- --- --- 004502 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004510 00000 ------------ G 0.60 0.83 0.72 A 0.40 0.17 0.28 0000 --- --- --- --- 004721 00000 ------------ G 0.58 0.82 0.70 A 0.42 0.18 0.30 0000 --- --- --- --- 004947 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005161 -----** NON-SYN G 0.98 0.98 0.98 A 0.02 0.02 0.02 0033 GTA ATA VAL(V) ILE(I) 005477 00000 ------------ A 0.56 0.80 0.67 G 0.44 0.20 0.33 0000 --- --- --- --- 006402 00000 ------------ A 0.75 0.50 0.63 C 0.25 0.50 0.37 0000 --- --- --- --- 006811 00000 ------------ T 0.57 0.80 0.68 A 0.43 0.20 0.32 0000 --- --- --- --- 007094 00000 ------------ + 0.92 1.00 0.96 - 0.08 0.00 0.04 0000 --- --- --- --- 007926 00000 ------------ T 0.80 0.93 0.87 G 0.20 0.07 0.13 0000 --- --- --- --- 007954 00000 ------------ G 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 008332 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 008680 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008894 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 009054 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 009183 00000 ------------ C 0.57 0.82 0.69 T 0.43 0.18 0.31 0000 --- --- --- --- 009195 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 009791 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 010440 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010538 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 010830 00000 ------------ G 1.00 0.82 0.91 A 0.00 0.18 0.09 0000 --- --- --- --- 011105 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 011112 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 011138 00000 ------------ G 0.88 0.93 0.90 A 0.12 0.07 0.10 0000 --- --- --- --- 011269 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 011323 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011702 -----** NON-SYN G 1.00 0.98 0.99 T 0.00 0.02 0.01 0298 GTC TTC VAL(V) PHE(F) 012087 00000 ------------ A 0.94 0.76 0.85 C 0.06 0.24 0.15 0000 --- --- --- --- 012258 00000 ------------ + 0.46 0.20 0.33 - 0.54 0.80 0.67 0000 --- --- --- --- 012383 -----** 3' UTR G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012497 -----** 3' UTR + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 012542 -----** 3' UTR A 0.57 0.80 0.68 C 0.43 0.20 0.32 0000 --- --- --- --- 012608 -----** 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012903 -----** 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013478 -----** 3' UTR A 1.00 0.84 0.92 C 0.00 0.16 0.08 0000 --- --- --- --- 014578 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014642 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 014798 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014869 00000 ------------ C 0.93 0.76 0.85 T 0.07 0.24 0.15 0000 --- --- --- --- 014962 00000 ------------ G 0.94 0.75 0.85 C 0.06 0.25 0.15 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000136: GT 007094: A 012258: G 012497: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001476 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001795 00000 ------------ A 0.77 0.83 0.80 T 0.23 0.17 0.20 0000 --- --- --- --- 001904 00063 5' UTR C 0.85 0.83 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 001913 00072 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0003 CCG CAG PRO(P) GLN(Q) 002360 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 002446 00000 ------------ C 0.78 0.53 0.65 T 0.23 0.47 0.35 0000 --- --- --- --- 002465 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 003286 00000 ------------ G 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 003416 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003417 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005515 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005555 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 005655 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005732 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 005775 00000 ------------ C 0.75 0.57 0.66 T 0.25 0.43 0.34 0000 --- --- --- --- 005776 00000 ------------ C 0.75 0.57 0.66 T 0.25 0.43 0.34 0000 --- --- --- --- 005777 00000 ------------ C 0.75 0.57 0.66 A 0.25 0.43 0.34 0000 --- --- --- --- 005788 00000 ------------ C 0.75 0.57 0.66 G 0.25 0.43 0.34 0000 --- --- --- --- 005926 00000 ------------ C 0.69 0.67 0.68 T 0.31 0.33 0.32 0000 --- --- --- --- 006189 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 006190 00000 ------------ T 0.83 0.59 0.71 C 0.17 0.41 0.29 0000 --- --- --- --- 006219 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006253 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006348 00000 ------------ C 0.87 0.80 0.84 T 0.13 0.20 0.16 0000 --- --- --- --- 006373 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 006479 00203 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0047 CCT TCT PRO(P) SER(S) 006601 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 006659 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006857 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007466 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 007575 00000 ------------ G 0.96 0.91 0.93 C 0.04 0.09 0.07 0000 --- --- --- --- 007875 00451 SYNON G 0.96 0.91 0.94 C 0.04 0.09 0.06 0129 GTG GTC VAL(V) VAL(V) 007918 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 007920 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008098 00000 ------------ T 1.00 0.82 0.91 G 0.00 0.18 0.09 0000 --- --- --- --- 008213 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008334 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008480 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 008700 00000 ------------ - 0.04 0.07 0.06 + 0.96 0.93 0.94 0000 --- --- --- --- 009704 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009917 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009929 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010424 00000 ------------ G 0.96 0.91 0.94 C 0.04 0.09 0.06 0000 --- --- --- --- 010800 00000 ------------ T 0.96 0.91 0.94 C 0.04 0.09 0.06 0000 --- --- --- --- 010858 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011131 00531 NON-SYN G 1.00 0.80 0.89 A 0.00 0.20 0.11 0156 CGT CAT ARG(R) HIS(H) 011542 00000 ------------ C 0.95 0.91 0.93 T 0.05 0.09 0.07 0000 --- --- --- --- 011640 00000 ------------ C 0.92 0.74 0.82 T 0.08 0.26 0.17 0000 --- --- --- --- 011739 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011921 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 011977 00000 ------------ C 0.90 0.71 0.81 T 0.10 0.29 0.19 0000 --- --- --- --- 012190 00000 ------------ C 0.80 0.98 0.89 T 0.20 0.02 0.11 0000 --- --- --- --- 012502 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012536 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012606 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012633 00000 ------------ C 0.96 0.73 0.85 T 0.04 0.27 0.15 0000 --- --- --- --- 012638 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012705 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012715 00000 ------------ - 0.96 0.91 0.93 + 0.04 0.09 0.07 0000 --- --- --- --- 012773 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012788 00000 ------------ A 0.90 0.74 0.82 G 0.10 0.26 0.18 0000 --- --- --- --- 012922 00705 NON-SYN A 0.90 0.70 0.80 G 0.10 0.30 0.20 0214 CAG CGG GLN(Q) ARG(R) 012965 00748 SYNON C 0.89 0.70 0.80 T 0.11 0.30 0.20 0228 CCC CCT PRO(P) PRO(P) 013003 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 013046 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013171 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013173 00000 ------------ T 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- 013178 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013729 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 013762 00000 ------------ G 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013852 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013887 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013957 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 013958 00000 ------------ G 0.87 0.89 0.88 T 0.13 0.11 0.12 0000 --- --- --- --- 014089 00000 ------------ A 0.83 0.69 0.77 T 0.17 0.31 0.23 0000 --- --- --- --- 014115 00000 ------------ A 0.88 0.69 0.79 G 0.12 0.31 0.21 0000 --- --- --- --- 014893 00000 ------------ G 0.75 0.70 0.72 A 0.25 0.30 0.28 0000 --- --- --- --- 014911 00000 ------------ A 0.88 0.91 0.89 G 0.12 0.09 0.11 0000 --- --- --- --- 015165 00799 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0245 GTG GTA VAL(V) VAL(V) 015623 00000 ------------ G 0.86 0.93 0.90 A 0.14 0.07 0.10 0000 --- --- --- --- 015640 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015722 00000 ------------ T 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 015762 00000 ------------ T 1.00 0.78 0.89 C 0.00 0.22 0.11 0000 --- --- --- --- 015763 00000 ------------ C 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 015764 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 015805 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 016001 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 016011 00000 ------------ C 0.85 0.70 0.78 T 0.15 0.30 0.22 0000 --- --- --- --- 016050 00000 ------------ C 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 016614 01081 NON-SYN C 0.98 1.00 0.99 G 0.02 0.00 0.01 0339 CAC CAG HIS(H) GLN(Q) 016642 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016788 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017100 00000 ------------ - 0.75 0.70 0.72 + 0.25 0.30 0.28 0000 --- --- --- --- 017278 00000 ------------ C 0.69 0.65 0.67 T 0.31 0.35 0.33 0000 --- --- --- --- 017362 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017431 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017594 00000 ------------ T 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 017689 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 017765 00000 ------------ C 0.96 0.78 0.87 T 0.04 0.22 0.13 0000 --- --- --- --- 017975 00000 ------------ C 0.58 0.63 0.61 T 0.42 0.37 0.39 0000 --- --- --- --- 017993 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018266 00000 ------------ G 0.82 0.70 0.76 A 0.17 0.30 0.24 0000 --- --- --- --- 018534 00000 ------------ T 0.86 0.70 0.77 C 0.14 0.30 0.23 0000 --- --- --- --- 018898 00000 ------------ C 0.84 0.68 0.76 T 0.16 0.32 0.24 0000 --- --- --- --- 019093 01158 NON-SYN T 0.77 0.70 0.73 C 0.23 0.30 0.27 0365 ATG ACG MET(M) THR(T) 019131 01196 NON-SYN G 0.85 0.70 0.78 C 0.15 0.30 0.22 0378 GGG CGG GLY(G) ARG(R) 019148 01213 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0383 TGC TGT CYS(C) CYS(C) 019279 00000 ------------ C 1.00 0.78 0.89 T 0.00 0.22 0.11 0000 --- --- --- --- 019291 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 019308 00000 ------------ T 1.00 0.78 0.89 C 0.00 0.22 0.11 0000 --- --- --- --- 019350 00000 ------------ C 1.00 0.77 0.89 T 0.00 0.23 0.11 0000 --- --- --- --- 019366 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019472 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019493 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019494 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019571 00000 ------------ C 1.00 0.77 0.89 T 0.00 0.23 0.11 0000 --- --- --- --- 019626 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 019710 00000 ------------ - 0.00 0.17 0.07 + 1.00 0.83 0.93 0000 --- --- --- --- 019842 00000 ------------ C 0.98 0.78 0.88 T 0.02 0.22 0.12 0000 --- --- --- --- 019872 00000 ------------ A 0.90 0.78 0.84 G 0.10 0.22 0.16 0000 --- --- --- --- 019914 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 020429 00000 ------------ G 0.65 0.98 0.81 A 0.35 0.02 0.19 0000 --- --- --- --- 020581 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020928 00000 ------------ T 0.52 0.70 0.61 G 0.48 0.30 0.39 0000 --- --- --- --- 020929 00000 ------------ A 0.67 0.98 0.83 C 0.33 0.02 0.17 0000 --- --- --- --- 021284 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 021379 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 021795 00000 ------------ T 0.98 0.92 0.95 G 0.02 0.08 0.05 0000 --- --- --- --- 021971 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 022362 00000 ------------ C 0.72 0.97 0.85 T 0.28 0.03 0.15 0000 --- --- --- --- 022958 00000 ------------ C 1.00 0.97 0.98 T 0.00 0.03 0.02 0000 --- --- --- --- 023187 00000 ------------ C 1.00 0.59 0.79 T 0.00 0.41 0.21 0000 --- --- --- --- 023406 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023458 00000 ------------ C 0.71 0.66 0.68 T 0.29 0.34 0.32 0000 --- --- --- --- 023691 00000 ------------ T 0.80 0.98 0.89 C 0.20 0.02 0.11 0000 --- --- --- --- 024057 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024415 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 024596 00000 ------------ G 0.93 0.52 0.73 A 0.07 0.48 0.27 0000 --- --- --- --- 024625 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024626 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024991 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 025126 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 025167 00000 ------------ T 1.00 0.65 0.83 C 0.00 0.35 0.17 0000 --- --- --- --- 025200 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 025621 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025941 00000 ------------ A 0.52 0.53 0.52 G 0.48 0.47 0.48 0000 --- --- --- --- 025947 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 025987 00000 ------------ C 0.93 0.97 0.95 T 0.07 0.03 0.05 0000 --- --- --- --- 026003 00000 ------------ - 0.04 0.42 0.20 + 0.96 0.58 0.80 0000 --- --- --- --- 026032 00000 ------------ G 0.94 0.94 0.94 A 0.06 0.06 0.06 0000 --- --- --- --- 026073 00000 ------------ G 0.92 0.86 0.89 A 0.08 0.14 0.11 0000 --- --- --- --- 026190 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026704 00000 ------------ T 1.00 0.61 0.80 C 0.00 0.39 0.20 0000 --- --- --- --- 026980 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027016 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027294 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027541 01783 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0573 GCC GCT ALA(A) ALA(A) 027659 00000 ------------ C 0.52 0.52 0.52 T 0.48 0.48 0.48 0000 --- --- --- --- 027694 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 027862 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 027967 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 028150 00000 ------------ G 0.92 0.93 0.92 A 0.08 0.07 0.08 0000 --- --- --- --- 028192 00000 ------------ C 0.65 0.98 0.82 T 0.35 0.02 0.18 0000 --- --- --- --- 028371 00000 ------------ T 1.00 0.88 0.94 C 0.00 0.12 0.06 0000 --- --- --- --- 028583 00000 ------------ G 0.88 0.61 0.74 A 0.12 0.39 0.26 0000 --- --- --- --- 028608 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028865 00000 ------------ C 0.90 0.63 0.78 T 0.10 0.37 0.23 0000 --- --- --- --- 028888 00000 ------------ G 0.98 0.63 0.81 T 0.02 0.37 0.19 0000 --- --- --- --- 029161 02087 3' UTR C 0.86 0.62 0.75 T 0.14 0.38 0.25 0000 --- --- --- --- 029280 00000 ------------ - 0.36 0.47 0.41 + 0.64 0.53 0.59 0000 --- --- --- --- 029549 00000 ------------ A 0.65 0.47 0.56 T 0.35 0.53 0.44 0000 --- --- --- --- 029566 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029765 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 030101 00000 ------------ G 0.92 0.88 0.90 C 0.08 0.12 0.10 0000 --- --- --- --- 030105 00000 ------------ - 0.65 0.34 0.50 + 0.35 0.66 0.50 0000 --- --- --- --- 030106 00000 ------------ G 0.40 0.67 0.52 C 0.60 0.33 0.48 0000 --- --- --- --- 030236 00000 ------------ C 0.58 0.43 0.51 A 0.42 0.57 0.49 0000 --- --- --- --- 030284 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 030305 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006219: A 008700: A 012715: A 017100: TTTG 019710: TA 025947: C 026003: TGATGCGATCTCGGCTCACTGCAA 029280: G 029765: ATTC 030105: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000135 00000 ------------ G 0.88 0.86 0.87 A 0.12 0.14 0.13 0000 --- --- --- --- 000138 00000 ------------ T 0.54 0.68 0.61 C 0.46 0.32 0.39 0000 --- --- --- --- 000197 00000 ------------ C 0.88 0.88 0.88 A 0.12 0.12 0.12 0000 --- --- --- --- 000315 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000332 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000453 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000966 00000 ------------ - 0.91 0.85 0.88 + 0.09 0.15 0.12 0000 --- --- --- --- 000972 00000 ------------ A 0.63 0.83 0.73 G 0.37 0.17 0.27 0000 --- --- --- --- 000974 00000 ------------ T 0.91 0.85 0.88 C 0.09 0.15 0.12 0000 --- --- --- --- 000984 00000 ------------ A 0.63 0.83 0.73 G 0.37 0.17 0.27 0000 --- --- --- --- 001084 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 001511 00000 ------------ - 0.05 0.00 0.03 + 0.95 1.00 0.97 0000 --- --- --- --- 001543 00000 ------------ A 0.62 0.85 0.74 G 0.38 0.15 0.26 0000 --- --- --- --- 002292 00285 5' UTR G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 002312 00305 5' UTR C 0.89 0.86 0.88 T 0.11 0.14 0.12 0000 --- --- --- --- 002449 00442 5' UTR G 0.89 0.98 0.94 T 0.11 0.02 0.06 0000 --- --- --- --- 003254 00000 ------------ C 0.66 0.79 0.72 T 0.34 0.21 0.28 0000 --- --- --- --- 003390 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003420 00000 ------------ T 0.98 0.86 0.92 C 0.02 0.14 0.08 0000 --- --- --- --- 003556 00000 ------------ C 0.75 0.93 0.85 T 0.25 0.07 0.15 0000 --- --- --- --- 003624 00000 ------------ A 0.50 0.73 0.62 G 0.50 0.27 0.38 0000 --- --- --- --- 003650 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 004012 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 007764 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 007864 00000 ------------ - 0.74 0.98 0.86 + 0.26 0.02 0.14 0000 --- --- --- --- 007880 00000 ------------ - 0.74 0.98 0.86 + 0.26 0.02 0.14 0000 --- --- --- --- 007900 00000 ------------ G 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 008030 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008047 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 008249 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008462 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008530 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008540 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 008652 00000 ------------ A 0.46 0.78 0.62 G 0.54 0.22 0.38 0000 --- --- --- --- 008727 00000 ------------ C 0.76 0.98 0.87 T 0.24 0.02 0.13 0000 --- --- --- --- 008865 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 008891 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009880 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010093 00000 ------------ A 0.85 0.80 0.82 G 0.15 0.20 0.18 0000 --- --- --- --- 010261 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010507 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 010614 00000 ------------ - 0.30 0.16 0.23 + 0.70 0.84 0.77 0000 --- --- --- --- 010655 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 010816 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014643 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 015064 00677 NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 0013 ATG GTG MET(M) VAL(V) 015240 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015689 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 015694 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 015879 00000 ------------ C 0.79 0.96 0.87 T 0.21 0.04 0.13 0000 --- --- --- --- 015959 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016263 00718 SYNON T 0.79 1.00 0.89 C 0.21 0.00 0.11 0026 GAT GAC ASP(D) ASP(D) 016299 00754 SYNON C 0.98 1.00 0.99 G 0.02 0.00 0.01 0038 TCC TCG SER(S) SER(S) 016668 00000 ------------ A 0.84 0.86 0.85 T 0.16 0.14 0.15 0000 --- --- --- --- 016670 00000 ------------ T 0.77 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 016692 00000 ------------ G 0.93 0.83 0.88 A 0.07 0.17 0.12 0000 --- --- --- --- 016952 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021480 01086 NON-SYN G 0.95 1.00 0.97 A 0.05 0.00 0.03 0149 CGA CAA ARG(R) GLN(Q) 021632 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 021739 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 021788 00000 ------------ G 0.98 0.88 0.93 A 0.02 0.12 0.07 0000 --- --- --- --- 021802 00000 ------------ G 0.94 0.95 0.94 C 0.06 0.05 0.06 0000 --- --- --- --- 021932 00000 ------------ A 0.48 0.88 0.66 G 0.52 0.12 0.34 0000 --- --- --- --- 022147 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022172 00000 ------------ C 0.76 0.88 0.82 G 0.24 0.12 0.18 0000 --- --- --- --- 022191 00000 ------------ T 0.93 0.83 0.88 G 0.07 0.17 0.12 0000 --- --- --- --- 023424 00000 ------------ A 0.81 0.96 0.89 G 0.19 0.04 0.11 0000 --- --- --- --- 023819 00000 ------------ G 0.79 0.32 0.57 A 0.21 0.68 0.43 0000 --- --- --- --- 023919 00000 ------------ A 0.81 0.87 0.84 C 0.19 0.13 0.16 0000 --- --- --- --- 024320 01354 SYNON C 0.77 0.96 0.87 T 0.23 0.04 0.13 0238 TCC TCT SER(S) SER(S) 024451 00000 ------------ A 0.88 0.97 0.92 T 0.12 0.03 0.08 0000 --- --- --- --- 025114 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025261 00000 ------------ T 0.93 0.83 0.88 G 0.07 0.17 0.12 0000 --- --- --- --- 025644 00000 ------------ - 0.16 0.05 0.11 + 0.84 0.95 0.89 0000 --- --- --- --- 026276 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026306 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 026388 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 026516 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 026540 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 031595 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 031805 00000 ------------ C 0.70 0.36 0.52 T 0.30 0.64 0.48 0000 --- --- --- --- 031934 00000 ------------ T 0.70 0.36 0.52 C 0.30 0.64 0.48 0000 --- --- --- --- 032026 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 032061 00000 ------------ G 0.70 0.35 0.51 C 0.30 0.65 0.49 0000 --- --- --- --- 032127 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 032733 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 032763 00000 ------------ C 0.71 0.35 0.53 T 0.29 0.65 0.47 0000 --- --- --- --- 032885 00000 ------------ G 0.60 0.78 0.69 C 0.40 0.22 0.31 0000 --- --- --- --- 032893 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033095 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 033480 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 033769 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 033774 00000 ------------ T 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 033905 00000 ------------ T 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 034704 00000 ------------ - 0.02 0.07 0.04 + 0.98 0.93 0.96 0000 --- --- --- --- 034811 00000 ------------ T 0.34 0.88 0.60 G 0.66 0.12 0.40 0000 --- --- --- --- 034832 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035023 00000 ------------ A 0.73 0.35 0.54 G 0.27 0.65 0.46 0000 --- --- --- --- 035212 00000 ------------ C 0.35 0.83 0.59 T 0.65 0.17 0.41 0000 --- --- --- --- 035359 00000 ------------ G 0.98 0.85 0.92 C 0.02 0.15 0.08 0000 --- --- --- --- 038874 00000 ------------ T 0.98 0.91 0.94 C 0.02 0.09 0.06 0000 --- --- --- --- 039296 00000 ------------ T 0.74 0.39 0.56 C 0.26 0.61 0.44 0000 --- --- --- --- 039985 00000 ------------ A 0.29 0.86 0.60 C 0.71 0.14 0.40 0000 --- --- --- --- 040236 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 040361 00000 ------------ T 0.38 0.86 0.61 C 0.62 0.14 0.39 0000 --- --- --- --- 040666 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 040688 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 040738 00000 ------------ T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 041093 00000 ------------ G 0.38 0.87 0.62 T 0.62 0.13 0.38 0000 --- --- --- --- 041138 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 044720 00000 ------------ G 0.35 0.86 0.60 A 0.65 0.14 0.40 0000 --- --- --- --- 044737 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 044921 00000 ------------ A 0.33 0.80 0.56 C 0.67 0.20 0.44 0000 --- --- --- --- 044997 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 045078 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 045867 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 045922 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 046155 00000 ------------ C 0.38 0.86 0.63 T 0.62 0.14 0.37 0000 --- --- --- --- 046169 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 046289 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 046432 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 046880 00000 ------------ A 0.32 0.80 0.57 G 0.68 0.20 0.43 0000 --- --- --- --- 049830 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 049969 00000 ------------ G 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 049977 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 050449 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 050455 00000 ------------ C 0.87 0.95 0.91 T 0.13 0.05 0.09 0000 --- --- --- --- 051029 00000 ------------ C 0.94 0.80 0.87 T 0.06 0.20 0.13 0000 --- --- --- --- 051095 00000 ------------ A 0.52 0.91 0.71 C 0.48 0.09 0.29 0000 --- --- --- --- 051361 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 051385 00000 ------------ G 0.33 0.79 0.55 A 0.67 0.21 0.45 0000 --- --- --- --- 051438 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 051796 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 051812 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 052066 00000 ------------ C 0.93 0.80 0.87 G 0.07 0.20 0.13 0000 --- --- --- --- 056024 00000 ------------ C 0.33 0.80 0.57 T 0.68 0.20 0.43 0000 --- --- --- --- 056161 00000 ------------ A 0.34 0.89 0.63 G 0.66 0.11 0.37 0000 --- --- --- --- 056334 00000 ------------ G 0.38 0.91 0.66 A 0.62 0.09 0.34 0000 --- --- --- --- 056653 00000 ------------ A 0.86 0.96 0.91 C 0.14 0.04 0.09 0000 --- --- --- --- 056839 00000 ------------ G 0.48 0.70 0.59 A 0.52 0.30 0.41 0000 --- --- --- --- 056926 00000 ------------ C 0.48 0.72 0.60 T 0.52 0.28 0.40 0000 --- --- --- --- 057005 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 057007 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 057013 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 057018 00000 ------------ G 0.72 0.39 0.55 A 0.28 0.61 0.45 0000 --- --- --- --- 057149 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 057253 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 057313 00000 ------------ C 0.96 1.00 0.99 T 0.04 0.00 0.01 0000 --- --- --- --- 057696 00000 ------------ C 0.84 0.95 0.91 T 0.16 0.05 0.09 0000 --- --- --- --- 057755 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 057963 00000 ------------ A 0.84 0.96 0.90 G 0.16 0.04 0.10 0000 --- --- --- --- 057968 00000 ------------ C 0.83 1.00 0.93 T 0.17 0.00 0.07 0000 --- --- --- --- 058150 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 061629 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 061770 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 061937 00000 ------------ - 0.83 0.96 0.90 + 0.17 0.04 0.10 0000 --- --- --- --- 062223 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 062526 00000 ------------ G 0.91 0.95 0.93 A 0.09 0.05 0.07 0000 --- --- --- --- 062552 01918 NON-SYN G 0.95 1.00 0.98 C 0.05 0.00 0.02 0426 CAG CAC GLN(Q) HIS(H) 062668 02034 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0465 GGT GAT GLY(G) ASP(D) 063033 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 063247 00000 ------------ T 0.48 0.72 0.60 A 0.52 0.28 0.40 0000 --- --- --- --- 063715 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 063748 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 063808 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 065885 00000 ------------ T 0.96 0.80 0.88 C 0.04 0.20 0.12 0000 --- --- --- --- 066183 00000 ------------ C 0.93 0.95 0.94 T 0.07 0.05 0.06 0000 --- --- --- --- 066529 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 066715 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 067258 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 067350 02212 SYNON C 0.98 1.00 0.99 A 0.02 0.00 0.01 0524 GGC GGA GLY(G) GLY(G) 067925 00000 ------------ A 0.71 0.39 0.55 G 0.29 0.61 0.45 0000 --- --- --- --- 068091 00000 ------------ T 0.71 0.39 0.55 G 0.29 0.61 0.45 0000 --- --- --- --- 068231 00000 ------------ A 0.81 0.89 0.85 T 0.19 0.11 0.15 0000 --- --- --- --- 068572 00000 ------------ G 0.71 0.39 0.55 C 0.29 0.61 0.45 0000 --- --- --- --- 068602 00000 ------------ T 0.96 0.80 0.88 C 0.04 0.20 0.12 0000 --- --- --- --- 068788 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 068823 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 073283 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 073547 00000 ------------ G 0.90 0.96 0.93 A 0.10 0.04 0.07 0000 --- --- --- --- 073724 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 073739 00000 ------------ G 0.90 0.96 0.93 A 0.10 0.04 0.07 0000 --- --- --- --- 073798 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 073872 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 073948 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 074154 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 074392 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 074680 00000 ------------ - 0.00 0.07 0.04 + 1.00 0.93 0.96 0000 --- --- --- --- 075132 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 075141 00000 ------------ A 0.71 0.39 0.55 T 0.29 0.61 0.45 0000 --- --- --- --- 075185 00000 ------------ T 0.48 0.72 0.60 C 0.52 0.28 0.40 0000 --- --- --- --- 079544 00000 ------------ C 0.75 0.39 0.57 T 0.25 0.61 0.43 0000 --- --- --- --- 079587 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 079656 00000 ------------ G 0.48 0.76 0.62 A 0.52 0.24 0.38 0000 --- --- --- --- 080170 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 080219 00000 ------------ T 0.74 0.39 0.57 C 0.26 0.61 0.43 0000 --- --- --- --- 080241 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 080263 00000 ------------ C 0.74 0.39 0.57 T 0.26 0.61 0.43 0000 --- --- --- --- 080436 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 080486 00000 ------------ T 0.71 0.39 0.55 C 0.29 0.61 0.45 0000 --- --- --- --- 080493 00000 ------------ T 0.90 0.96 0.93 G 0.10 0.04 0.07 0000 --- --- --- --- 080611 00000 ------------ G 0.70 0.44 0.58 A 0.30 0.56 0.42 0000 --- --- --- --- 080846 00000 ------------ G 0.69 0.39 0.54 A 0.31 0.61 0.46 0000 --- --- --- --- 080851 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 080873 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 081170 00000 ------------ G 0.48 0.73 0.60 A 0.52 0.27 0.40 0000 --- --- --- --- 081364 02569 SYNON G 0.71 0.39 0.55 A 0.29 0.61 0.45 0643 ACG ACA THR(T) THR(T) 083631 00000 ------------ A 0.83 0.98 0.90 G 0.17 0.02 0.10 0000 --- --- --- --- 083971 00000 ------------ A 0.71 0.39 0.55 G 0.29 0.61 0.45 0000 --- --- --- --- 084049 00000 ------------ T 0.96 0.87 0.91 A 0.04 0.13 0.09 0000 --- --- --- --- 084054 00000 ------------ A 0.71 0.39 0.55 C 0.29 0.61 0.45 0000 --- --- --- --- 084078 00000 ------------ G 0.74 0.43 0.57 C 0.26 0.57 0.42 0000 --- --- --- --- 084173 00000 ------------ T 0.80 0.84 0.82 G 0.20 0.16 0.18 0000 --- --- --- --- 084183 00000 ------------ A 0.73 0.41 0.57 G 0.27 0.59 0.43 0000 --- --- --- --- 084316 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 084328 00000 ------------ A 0.85 0.96 0.90 G 0.15 0.04 0.10 0000 --- --- --- --- 084940 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 085052 00000 ------------ A 0.72 0.39 0.56 G 0.28 0.61 0.44 0000 --- --- --- --- 085093 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 085125 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 085431 00000 ------------ G 0.50 0.77 0.64 A 0.50 0.23 0.36 0000 --- --- --- --- 085484 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 085647 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 085662 00000 ------------ T 0.83 0.96 0.89 C 0.17 0.04 0.11 0000 --- --- --- --- 086054 00000 ------------ T 0.48 0.72 0.60 C 0.52 0.28 0.40 0000 --- --- --- --- 086553 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 086660 00000 ------------ G 0.71 0.39 0.55 A 0.29 0.61 0.45 0000 --- --- --- --- 086696 00000 ------------ T 0.71 0.39 0.55 C 0.29 0.61 0.45 0000 --- --- --- --- 088602 00000 ------------ - 0.04 0.20 0.12 + 0.96 0.80 0.88 0000 --- --- --- --- 088646 00000 ------------ G 0.48 0.76 0.62 A 0.52 0.24 0.38 0000 --- --- --- --- 089121 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 089328 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 089335 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 089354 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 089658 00000 ------------ G 0.37 0.67 0.52 A 0.63 0.33 0.48 0000 --- --- --- --- 089931 00000 ------------ G 0.38 0.72 0.54 A 0.62 0.28 0.46 0000 --- --- --- --- 090551 02977 SYNON A 0.54 0.67 0.61 C 0.46 0.33 0.39 0779 CCA CCC PRO(P) PRO(P) 090575 03001 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0787 ACG ACA THR(T) THR(T) 090637 03063 NON-SYN T 0.98 1.00 0.99 G 0.02 0.00 0.01 0808 CTC CGC LEU(L) ARG(R) 091434 03860 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 091497 03923 3' UTR T 0.74 0.97 0.85 G 0.26 0.03 0.15 0000 --- --- --- --- 091513 03939 3' UTR A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 091568 03994 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 091622 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 092017 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 092018 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 092141 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 092485 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 092750 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000966: T 001511: TTTA 007864: CATAGTAGTGGAAT 007880: C 008540: T 010261: A 010614: T 015694: T 025644: TTAAC 033769: AAA 034704: ATGA 045078: A 061629: GATTT 061937: A 066715: T 074680: CCTTT 088602: CTC 092485: GTACCCC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000293 00000 ------------ A 0.91 0.80 0.86 C 0.09 0.20 0.14 0000 --- --- --- --- 000299 00000 ------------ + 0.79 1.00 0.90 - 0.21 0.00 0.10 0000 --- --- --- --- 000492 00000 ------------ A 0.70 1.00 0.85 G 0.30 0.00 0.15 0000 --- --- --- --- 000662 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000693 00000 ------------ C 0.75 0.80 0.78 T 0.25 0.20 0.22 0000 --- --- --- --- 000795 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001008 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001090 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001159 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 001336 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002319 00000 ------------ C 0.80 0.95 0.88 A 0.20 0.05 0.12 0000 --- --- --- --- 002346 00000 ------------ G 0.78 0.98 0.88 C 0.22 0.02 0.12 0000 --- --- --- --- 002553 00000 ------------ C 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 002643 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002963 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003490 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003697 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 003727 00000 ------------ C 0.33 0.74 0.54 T 0.67 0.26 0.46 0000 --- --- --- --- 003848 00445 NON-SYN G 0.88 0.73 0.80 A 0.12 0.27 0.20 0130 CGG CAG ARG(R) GLN(Q) 003895 00492 3' UTR T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004329 00926 3' UTR G 0.95 0.82 0.89 A 0.05 0.18 0.11 0000 --- --- --- --- 004384 00981 3' UTR C 0.50 0.86 0.67 A 0.50 0.14 0.33 0000 --- --- --- --- 004481 01078 3' UTR G 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 004553 01150 3' UTR C 0.84 0.80 0.82 T 0.16 0.20 0.18 0000 --- --- --- --- 005592 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006253 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006297 00000 ------------ G 1.00 0.88 0.94 A 0.00 0.12 0.06 0000 --- --- --- --- 006341 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006576 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 006579 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006741 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006760 00000 ------------ G 0.92 0.91 0.91 A 0.08 0.09 0.09 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000299: CA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000272 00000 ------------ A 0.85 0.80 0.82 G 0.15 0.20 0.18 0000 --- --- --- --- 000481 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 000689 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001429 00000 ------------ G 1.00 0.79 0.89 T 0.00 0.21 0.11 0000 --- --- --- --- 001922 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 002593 00000 ------------ A 0.61 0.80 0.71 C 0.39 0.20 0.29 0000 --- --- --- --- 003122 00000 ------------ G 0.91 0.80 0.86 C 0.09 0.20 0.14 0000 --- --- --- --- 003142 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003419 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 003456 00000 ------------ - 0.85 1.00 0.92 + 0.15 0.00 0.08 0000 --- --- --- --- 003996 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004149 00000 ------------ A 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 004157 00000 ------------ C 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 004219 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004289 00000 ------------ G 0.93 0.80 0.87 A 0.07 0.20 0.13 0000 --- --- --- --- 004353 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 004629 00000 ------------ T 0.77 0.84 0.81 C 0.23 0.16 0.19 0000 --- --- --- --- 004754 00000 ------------ C 0.77 0.84 0.81 A 0.23 0.16 0.19 0000 --- --- --- --- 004766 00000 ------------ - 0.18 0.00 0.09 + 0.82 1.00 0.91 0000 --- --- --- --- 005124 00456 NON-SYN T 0.95 1.00 0.98 C 0.05 0.00 0.02 0111 TGG CGG TRP(W) ARG(R) 005708 00000 ------------ G 0.59 1.00 0.82 A 0.41 0.00 0.18 0000 --- --- --- --- 005901 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006158 00000 ------------ T 0.52 1.00 0.77 A 0.48 0.00 0.23 0000 --- --- --- --- 006250 00000 ------------ G 0.55 1.00 0.78 A 0.45 0.00 0.22 0000 --- --- --- --- 006251 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006411 00000 ------------ A 0.33 0.80 0.58 C 0.68 0.20 0.42 0000 --- --- --- --- 006697 00000 ------------ G 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 006866 00000 ------------ C 0.64 1.00 0.82 A 0.36 0.00 0.18 0000 --- --- --- --- 006936 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007140 00000 ------------ - 0.36 0.00 0.18 + 0.64 1.00 0.82 0000 --- --- --- --- 007304 00000 ------------ G 0.76 0.82 0.79 C 0.24 0.18 0.21 0000 --- --- --- --- 007486 00000 ------------ C 0.50 1.00 0.75 G 0.50 0.00 0.25 0000 --- --- --- --- 007784 00000 ------------ G 0.78 0.80 0.79 T 0.22 0.20 0.21 0000 --- --- --- --- 008105 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008141 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008543 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 008612 00000 ------------ T 0.68 1.00 0.85 A 0.32 0.00 0.15 0000 --- --- --- --- 008616 00000 ------------ - 0.35 0.00 0.18 + 0.65 1.00 0.82 0000 --- --- --- --- 008670 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008726 00000 ------------ T 0.37 1.00 0.68 C 0.63 0.00 0.32 0000 --- --- --- --- 008742 00000 ------------ A 0.50 1.00 0.74 G 0.50 0.00 0.26 0000 --- --- --- --- 009060 00000 ------------ G 0.50 1.00 0.75 A 0.50 0.00 0.25 0000 --- --- --- --- 009133 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 009154 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009191 00000 ------------ T 0.50 1.00 0.75 G 0.50 0.00 0.25 0000 --- --- --- --- 009195 00000 ------------ A 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 009304 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 009341 00000 ------------ T 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 009407 00000 ------------ C 0.50 1.00 0.75 T 0.50 0.00 0.25 0000 --- --- --- --- 009501 00000 ------------ C 0.50 1.00 0.75 T 0.50 0.00 0.25 0000 --- --- --- --- 009555 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009629 00000 ------------ G 0.50 1.00 0.75 A 0.50 0.00 0.25 0000 --- --- --- --- 009812 00000 ------------ G 0.50 1.00 0.75 A 0.50 0.00 0.25 0000 --- --- --- --- 009918 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010230 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 010954 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011699 00000 ------------ C 0.64 1.00 0.82 G 0.36 0.00 0.18 0000 --- --- --- --- 011753 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 011936 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 012443 00000 ------------ C 0.48 1.00 0.74 T 0.52 0.00 0.26 0000 --- --- --- --- 012478 00000 ------------ T 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 012562 00000 ------------ C 0.30 0.80 0.56 T 0.70 0.20 0.44 0000 --- --- --- --- 013076 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 013173 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 014151 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 014280 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 014453 00000 ------------ - 0.48 0.00 0.23 + 0.52 1.00 0.77 0000 --- --- --- --- 014556 00000 ------------ T 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 014977 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 015403 00000 ------------ A 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 015859 00000 ------------ - 0.00 0.17 0.08 + 1.00 0.82 0.92 0000 --- --- --- --- 016076 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 016099 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 016115 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016140 00000 ------------ A 0.28 0.80 0.54 G 0.72 0.20 0.46 0000 --- --- --- --- 016234 00000 ------------ T 0.68 1.00 0.84 G 0.32 0.00 0.16 0000 --- --- --- --- 016385 00000 ------------ A 0.78 0.80 0.79 C 0.22 0.20 0.21 0000 --- --- --- --- 016520 00000 ------------ A 0.28 0.80 0.54 C 0.72 0.20 0.46 0000 --- --- --- --- 016812 00000 ------------ - 0.09 0.09 0.09 + 0.91 0.91 0.91 0000 --- --- --- --- 016869 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 017184 00000 ------------ G 0.65 1.00 0.83 A 0.35 0.00 0.17 0000 --- --- --- --- 017239 00000 ------------ C 0.52 1.00 0.77 A 0.48 0.00 0.23 0000 --- --- --- --- 017271 00000 ------------ C 0.71 1.00 0.86 T 0.29 0.00 0.14 0000 --- --- --- --- 017348 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 017375 00000 ------------ C 0.50 1.00 0.75 T 0.50 0.00 0.25 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003456: T 004766: AA 007140: T 008616: T 014453: A 015859: GA 016812: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000085 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 000123 00000 ------------ T 1.00 0.83 0.91 A 0.00 0.17 0.09 0000 --- --- --- --- 000156 00000 ------------ T 0.77 0.70 0.73 C 0.23 0.30 0.27 0000 --- --- --- --- 000323 00000 ------------ T 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 000437 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000471 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 000480 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000558 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 000765 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000810 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 000948 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001281 00000 ------------ G 1.00 0.83 0.91 A 0.00 0.17 0.09 0000 --- --- --- --- 001361 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001394 00000 ------------ C 0.65 0.41 0.53 T 0.35 0.59 0.47 0000 --- --- --- --- 001445 00000 ------------ G 0.98 0.87 0.93 C 0.02 0.13 0.07 0000 --- --- --- --- 001832 00000 ------------ G 0.98 0.85 0.92 A 0.02 0.15 0.08 0000 --- --- --- --- 001949 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002094 00000 ------------ C 0.77 0.62 0.70 T 0.23 0.38 0.30 0000 --- --- --- --- 002138 00000 ------------ A 0.60 0.57 0.59 C 0.40 0.42 0.41 0000 --- --- --- --- 002164 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 002409 00000 ------------ C 0.80 0.61 0.71 T 0.20 0.39 0.29 0000 --- --- --- --- 002440 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 002554 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 002584 00000 ------------ T 0.66 0.61 0.64 C 0.34 0.39 0.36 0000 --- --- --- --- 002667 00000 ------------ - 0.48 0.39 0.44 + 0.52 0.61 0.56 0000 --- --- --- --- 002911 00000 ------------ T 0.88 0.97 0.92 A 0.12 0.03 0.08 0000 --- --- --- --- 003149 00000 ------------ - 0.83 0.96 0.89 + 0.17 0.04 0.11 0000 --- --- --- --- 003265 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 003731 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003897 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003906 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004041 00000 ------------ T 0.48 0.54 0.51 C 0.52 0.46 0.49 0000 --- --- --- --- 004077 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004079 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 004555 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004856 00000 ------------ A 0.73 0.50 0.62 G 0.27 0.50 0.38 0000 --- --- --- --- 005084 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005111 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005211 00000 ------------ A 0.83 1.00 0.90 G 0.17 0.00 0.10 0000 --- --- --- --- 005358 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005425 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005488 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005580 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 005588 00000 ------------ A 0.90 0.83 0.86 G 0.10 0.17 0.14 0000 --- --- --- --- 005606 00000 ------------ G 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 005937 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006078 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006202 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006341 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006359 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006371 00000 ------------ G 0.75 0.54 0.65 A 0.25 0.46 0.35 0000 --- --- --- --- 006453 00000 ------------ A 0.75 0.54 0.65 G 0.25 0.46 0.35 0000 --- --- --- --- 006458 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 006817 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007124 00000 ------------ C 0.95 0.86 0.90 T 0.05 0.14 0.10 0000 --- --- --- --- 007357 00000 ------------ G 0.70 0.62 0.66 A 0.30 0.38 0.34 0000 --- --- --- --- 007775 00000 ------------ G 0.73 0.64 0.68 A 0.27 0.36 0.32 0000 --- --- --- --- 007820 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008034 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008129 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008205 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008370 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008372 00000 ------------ T 0.48 0.52 0.50 C 0.52 0.48 0.50 0000 --- --- --- --- 008855 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 009011 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009045 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009053 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009068 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009116 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009170 00000 ------------ G 0.50 0.61 0.56 A 0.50 0.39 0.44 0000 --- --- --- --- 009728 00000 ------------ C 1.00 0.85 0.92 T 0.00 0.15 0.08 0000 --- --- --- --- 009818 00000 ------------ G 0.64 0.61 0.62 C 0.36 0.39 0.38 0000 --- --- --- --- 009899 00000 ------------ C 0.98 0.93 0.95 T 0.02 0.07 0.05 0000 --- --- --- --- 009964 00000 ------------ C 0.95 0.95 0.95 G 0.05 0.05 0.05 0000 --- --- --- --- 010142 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 010200 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010221 00000 ------------ G 0.90 0.67 0.79 A 0.10 0.33 0.21 0000 --- --- --- --- 010246 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 010288 00000 ------------ G 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 010373 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010640 00000 ------------ G 0.75 0.52 0.64 C 0.25 0.48 0.36 0000 --- --- --- --- 010671 00000 ------------ G 0.62 0.60 0.61 A 0.38 0.40 0.39 0000 --- --- --- --- 010729 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 010739 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 010904 00000 ------------ G 0.79 0.53 0.66 C 0.21 0.47 0.34 0000 --- --- --- --- 011039 00000 ------------ G 0.98 0.93 0.95 A 0.02 0.07 0.05 0000 --- --- --- --- 011195 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011243 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011325 00000 ------------ A 0.75 0.52 0.64 G 0.25 0.48 0.36 0000 --- --- --- --- 011337 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011421 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011671 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 011694 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012081 00000 ------------ C 0.47 0.55 0.51 T 0.53 0.45 0.49 0000 --- --- --- --- 012106 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 012243 00000 ------------ C 0.95 0.95 0.95 T 0.05 0.05 0.05 0000 --- --- --- --- 012270 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 012364 00000 ------------ - 0.64 0.52 0.58 + 0.36 0.48 0.42 0000 --- --- --- --- 012527 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012554 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012711 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013028 00000 ------------ T 0.62 0.70 0.66 C 0.38 0.30 0.34 0000 --- --- --- --- 013177 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 013300 00000 ------------ G 0.65 0.70 0.67 A 0.35 0.30 0.33 0000 --- --- --- --- 013318 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013521 00000 ------------ G 0.65 0.71 0.68 T 0.35 0.29 0.32 0000 --- --- --- --- 013523 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 013538 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 013709 00000 ------------ G 0.89 0.95 0.92 A 0.11 0.05 0.08 0000 --- --- --- --- 013900 00000 ------------ A 0.83 0.90 0.86 C 0.17 0.10 0.14 0000 --- --- --- --- 014270 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014325 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014340 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014530 00000 ------------ A 0.67 0.70 0.68 T 0.33 0.30 0.32 0000 --- --- --- --- 014536 00000 ------------ C 0.48 0.70 0.59 T 0.52 0.30 0.41 0000 --- --- --- --- 014539 00000 ------------ T 0.48 0.70 0.59 C 0.52 0.30 0.41 0000 --- --- --- --- 014723 00000 ------------ A 0.48 0.70 0.59 G 0.52 0.30 0.41 0000 --- --- --- --- 014801 00000 ------------ C 0.75 0.70 0.73 T 0.25 0.30 0.27 0000 --- --- --- --- 014863 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 014936 00000 ------------ C 0.98 0.93 0.95 T 0.02 0.07 0.05 0000 --- --- --- --- 014948 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 015035 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015181 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015461 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015489 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015648 00000 ------------ C 0.76 0.80 0.78 G 0.24 0.20 0.22 0000 --- --- --- --- 015717 00000 ------------ T 0.76 0.80 0.78 A 0.24 0.20 0.22 0000 --- --- --- --- 016155 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016225 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016286 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016615 00000 ------------ A 0.89 0.95 0.92 T 0.11 0.05 0.08 0000 --- --- --- --- 017015 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 017030 00000 ------------ - 1.00 0.95 0.98 + 0.00 0.05 0.02 0000 --- --- --- --- 017531 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 017620 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 017934 00000 ------------ T 0.83 0.91 0.87 C 0.17 0.09 0.13 0000 --- --- --- --- 018298 00000 ------------ C 0.90 0.65 0.78 A 0.10 0.35 0.22 0000 --- --- --- --- 018356 00000 ------------ G 0.73 0.70 0.71 A 0.27 0.30 0.29 0000 --- --- --- --- 018408 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 018505 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 018565 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018577 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018593 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018662 00000 ------------ T 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 018668 00000 ------------ T 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 019057 00000 ------------ C 1.00 0.89 0.95 T 0.00 0.11 0.05 0000 --- --- --- --- 019146 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 019295 00000 ------------ A 0.90 0.91 0.90 T 0.10 0.09 0.10 0000 --- --- --- --- 019331 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019626 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019658 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019695 00000 ------------ T 0.65 0.70 0.67 C 0.35 0.30 0.33 0000 --- --- --- --- 019725 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 020460 00000 ------------ C 0.79 0.63 0.71 A 0.21 0.37 0.29 0000 --- --- --- --- 020595 00000 ------------ G 0.90 0.83 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 020768 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 020796 00000 ------------ A 0.69 0.89 0.79 G 0.31 0.11 0.21 0000 --- --- --- --- 020896 00000 ------------ G 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 020964 00000 ------------ G 0.75 0.70 0.72 A 0.25 0.30 0.28 0000 --- --- --- --- 021136 00000 ------------ G 0.54 0.67 0.61 A 0.46 0.33 0.39 0000 --- --- --- --- 021309 00000 ------------ A 0.89 0.88 0.88 G 0.11 0.12 0.12 0000 --- --- --- --- 021750 00301 SYNON G 0.89 0.80 0.85 A 0.11 0.20 0.15 0073 ACG ACA THR(T) THR(T) 021892 00000 ------------ G 0.90 0.83 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 021940 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021994 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 022085 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022373 00000 ------------ T 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 022505 00000 ------------ A 0.75 0.96 0.85 G 0.25 0.04 0.15 0000 --- --- --- --- 023028 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023044 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023198 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 023394 00000 ------------ - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 023430 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024248 00000 ------------ T 0.83 0.65 0.74 C 0.17 0.35 0.26 0000 --- --- --- --- 024412 00000 ------------ G 0.94 0.96 0.95 C 0.06 0.04 0.05 0000 --- --- --- --- 024605 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025910 00000 ------------ A 0.82 0.62 0.72 G 0.18 0.38 0.28 0000 --- --- --- --- 025955 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026087 00000 ------------ C 0.91 0.97 0.94 A 0.09 0.03 0.06 0000 --- --- --- --- 026121 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026150 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 026157 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026206 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026237 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026248 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026535 00000 ------------ - 0.63 0.43 0.52 + 0.37 0.57 0.48 0000 --- --- --- --- 026546 00000 ------------ - 0.68 0.43 0.55 + 0.32 0.57 0.45 0000 --- --- --- --- 026615 00000 ------------ G 0.79 0.52 0.65 C 0.21 0.48 0.35 0000 --- --- --- --- 026616 00000 ------------ T 0.82 0.91 0.87 C 0.18 0.09 0.13 0000 --- --- --- --- 026817 00000 ------------ A 0.87 0.91 0.89 G 0.13 0.09 0.11 0000 --- --- --- --- 026875 00000 ------------ A 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 027279 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027525 00592 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0170 TCC TCT SER(S) SER(S) 027560 00627 NON-SYN C 0.70 0.39 0.54 A 0.30 0.61 0.46 0182 ACC AAC THR(T) ASN(N) 027655 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027914 00000 ------------ C 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 028232 00000 ------------ A 0.67 0.39 0.53 G 0.33 0.61 0.47 0000 --- --- --- --- 028255 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 028445 00000 ------------ T 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 028486 00000 ------------ C 0.67 0.83 0.74 T 0.33 0.17 0.26 0000 --- --- --- --- 028519 00000 ------------ T 0.44 0.70 0.56 C 0.56 0.30 0.44 0000 --- --- --- --- 028536 00000 ------------ C 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 028543 00000 ------------ T 0.54 0.70 0.62 C 0.46 0.30 0.38 0000 --- --- --- --- 028754 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 028789 00000 ------------ A 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 029033 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 029060 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 029097 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029330 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 029716 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 029772 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029937 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030288 00000 ------------ A 0.68 0.36 0.52 G 0.32 0.64 0.48 0000 --- --- --- --- 030310 00000 ------------ G 0.89 0.96 0.92 C 0.11 0.04 0.08 0000 --- --- --- --- 030315 00000 ------------ G 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 030372 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030614 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031095 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031200 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031233 00000 ------------ G 0.77 0.74 0.76 A 0.23 0.26 0.24 0000 --- --- --- --- 031270 00000 ------------ G 0.92 0.80 0.86 A 0.08 0.20 0.14 0000 --- --- --- --- 031540 00727 SYNON G 0.98 1.00 0.99 C 0.02 0.00 0.01 0215 CTG CTC LEU(L) LEU(L) 031644 00000 ------------ T 0.60 0.48 0.54 C 0.40 0.52 0.46 0000 --- --- --- --- 031659 00000 ------------ C 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 031662 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 031827 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031934 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 032005 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032035 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 032110 00000 ------------ G 0.46 0.65 0.55 A 0.54 0.35 0.45 0000 --- --- --- --- 032152 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 032155 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 032161 00000 ------------ T 0.81 0.83 0.82 A 0.19 0.17 0.18 0000 --- --- --- --- 032189 00000 ------------ A 0.88 0.96 0.91 G 0.12 0.04 0.09 0000 --- --- --- --- 032341 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 032435 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 032529 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032632 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032649 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032794 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032801 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033073 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 033170 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 033234 00000 ------------ T 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 033311 00000 ------------ G 0.91 0.79 0.85 A 0.09 0.21 0.15 0000 --- --- --- --- 033496 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 033500 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033505 00000 ------------ - 0.86 0.96 0.91 + 0.14 0.04 0.09 0000 --- --- --- --- 033770 00000 ------------ C 0.73 0.50 0.61 A 0.27 0.50 0.39 0000 --- --- --- --- 034116 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 034196 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034338 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 034439 00000 ------------ A 0.88 0.96 0.91 C 0.12 0.04 0.09 0000 --- --- --- --- 034473 00000 ------------ T 0.85 0.96 0.90 C 0.15 0.04 0.10 0000 --- --- --- --- 034497* 034879 00892 3' UTR G 0.88 0.80 0.84 A 0.12 0.20 0.16 0000 --- --- --- --- 034881 00894 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 034953 00966 3' UTR A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035090 01103 3' UTR G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 035098 01111 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035237 01250 3' UTR G 0.76 0.52 0.64 T 0.24 0.48 0.36 0000 --- --- --- --- 035303 01316 3' UTR - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 035313 01326 3' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 035388 01401 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035489 01502 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000558: G 000810: CAG 002554: A 002667: GTCCGCCATCCTCCCCTCTGCCTGGCCCC 003149: T 003265: AGCT 012364: T 012527: TGCAC 017030: A 018408: AAAAA 019146: C 020768: TAAGGCAAGG 023394: G 026535: TTCTT 026546: A 029716: TCCTTTTCTGTACCATGTTTGTT 031934: A 033505: A 035303: TCAATTACAA 035313: GAGACGTCTACAGGGAAGACACCAGCGTTTG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Codon3 Amino1 Amino2 Amino3 034497 C 0.75 0.52 0.64 G 0.21 0.48 0.34 T 0.04 0.00 0.02 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000357 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000423 00000 ------------ C 1.00 0.83 0.91 T 0.00 0.17 0.09 0000 --- --- --- --- 000424 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000521 00000 ------------ C 0.59 0.59 0.59 T 0.41 0.41 0.41 0000 --- --- --- --- 000702 00000 ------------ T 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 000723 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000808 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 000810 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000980 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001007 00000 ------------ - 0.03 0.05 0.04 + 0.97 0.95 0.96 0000 --- --- --- --- 001386 00000 ------------ G 0.98 0.76 0.87 C 0.02 0.24 0.13 0000 --- --- --- --- 001544 00000 ------------ A 0.83 0.82 0.83 C 0.17 0.18 0.17 0000 --- --- --- --- 001899 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001985 00061 5' UTR C 0.96 0.78 0.87 A 0.04 0.23 0.13 0000 --- --- --- --- 002090 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002215 00000 ------------ T 0.80 0.70 0.76 A 0.20 0.30 0.24 0000 --- --- --- --- 002408 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 003017 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003179 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003411 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003453 00000 ------------ T 0.69 0.74 0.71 C 0.31 0.26 0.29 0000 --- --- --- --- 003557 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003906 00000 ------------ G 0.81 0.79 0.80 A 0.19 0.21 0.20 0000 --- --- --- --- 003959 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 004106 00000 ------------ C 0.83 0.95 0.89 G 0.17 0.05 0.11 0000 --- --- --- --- 004288 00000 ------------ C 0.83 0.95 0.88 G 0.17 0.05 0.12 0000 --- --- --- --- 004663 00000 ------------ - 0.13 0.21 0.17 + 0.87 0.79 0.83 0000 --- --- --- --- 004954 00000 ------------ C 0.80 1.00 0.89 T 0.20 0.00 0.11 0000 --- --- --- --- 005122 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005233 00000 ------------ G 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 005723 00000 ------------ C 0.85 0.93 0.89 T 0.15 0.07 0.11 0000 --- --- --- --- 006097 00000 ------------ G 0.85 0.91 0.88 A 0.15 0.09 0.12 0000 --- --- --- --- 006791 00866 NON-SYN G 0.95 1.00 0.97 A 0.05 0.00 0.03 0188 CGA CAA ARG(R) GLN(Q) 006842 00917 NON-SYN C 0.82 1.00 0.91 T 0.17 0.00 0.09 0205 TCG TTG SER(S) LEU(L) 007260 01335 SYNON A 0.68 0.76 0.72 G 0.33 0.24 0.28 0344 ACA ACG THR(T) THR(T) 007435 00000 ------------ - 0.83 0.93 0.88 + 0.17 0.07 0.12 0000 --- --- --- --- 007725 00000 ------------ G 0.83 0.77 0.80 A 0.17 0.23 0.20 0000 --- --- --- --- 008583 00000 ------------ T 0.83 0.74 0.78 C 0.17 0.26 0.22 0000 --- --- --- --- 009173 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009264 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009323 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009496 00000 ------------ G 0.83 0.76 0.79 T 0.17 0.24 0.21 0000 --- --- --- --- 010860 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 011012 00000 ------------ C 0.85 0.95 0.90 T 0.15 0.05 0.10 0000 --- --- --- --- 011022 00000 ------------ T 0.69 0.76 0.72 C 0.31 0.24 0.28 0000 --- --- --- --- 011050 00000 ------------ G 0.52 0.50 0.51 T 0.48 0.50 0.49 0000 --- --- --- --- 011069 00000 ------------ - 0.15 0.03 0.09 + 0.85 0.97 0.91 0000 --- --- --- --- 011107 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 011359 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011436 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011527 00000 ------------ T 0.83 0.82 0.83 C 0.17 0.18 0.17 0000 --- --- --- --- 011859 00000 ------------ A 0.78 0.93 0.85 G 0.22 0.07 0.15 0000 --- --- --- --- 012252 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012570 00000 ------------ C 0.79 0.93 0.86 T 0.21 0.07 0.14 0000 --- --- --- --- 012685 00000 ------------ C 0.81 0.93 0.87 A 0.19 0.07 0.13 0000 --- --- --- --- 012698 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012729 01641 NON-SYN T 0.81 0.93 0.87 G 0.19 0.07 0.13 0446 AAT AAG ASN(N) LYS(K) 012876 01788 SYNON G 0.81 0.93 0.87 A 0.19 0.07 0.13 0495 AGG AGA ARG(R) ARG(R) 013053 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 013400 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 013507 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 013754 00000 ------------ C 0.82 0.93 0.88 A 0.18 0.07 0.12 0000 --- --- --- --- 013815 00000 ------------ C 0.78 0.93 0.86 G 0.22 0.07 0.14 0000 --- --- --- --- 013903 00000 ------------ A 0.80 0.93 0.87 G 0.20 0.07 0.13 0000 --- --- --- --- 014089 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 014251 00000 ------------ G 0.80 0.93 0.87 C 0.20 0.07 0.13 0000 --- --- --- --- 014266 00000 ------------ C 0.85 0.93 0.89 T 0.15 0.07 0.11 0000 --- --- --- --- 014480 00000 ------------ C 0.84 0.92 0.88 T 0.16 0.08 0.12 0000 --- --- --- --- 014515 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 014574 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014682 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014911 00000 ------------ T 0.98 0.93 0.95 G 0.02 0.07 0.05 0000 --- --- --- --- 014965 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014970 00000 ------------ A 0.98 0.78 0.88 T 0.02 0.23 0.12 0000 --- --- --- --- 014985 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 015004 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015033 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015223 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 015417 02017 TRUNCATION G 0.85 0.78 0.82 T 0.15 0.22 0.18 0572 GAA TAA GLU(E) *** 015800 02400 3' UTR G 0.76 0.76 0.76 T 0.24 0.24 0.24 0000 --- --- --- --- 016205 02805 3' UTR G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016242 02842 3' UTR T 0.75 0.59 0.67 C 0.25 0.41 0.33 0000 --- --- --- --- 016468 03068 3' UTR C 0.93 0.83 0.88 T 0.07 0.17 0.12 0000 --- --- --- --- 016607 03207 3' UTR G 0.96 0.81 0.89 A 0.04 0.19 0.11 0000 --- --- --- --- 017859 04459 3' UTR C 0.94 0.80 0.87 T 0.06 0.20 0.13 0000 --- --- --- --- 018169 04769 3' UTR T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 018400 05000 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018564 05164 3' UTR T 0.79 0.55 0.69 C 0.21 0.45 0.31 0000 --- --- --- --- 018591 05191 3' UTR A 0.81 0.95 0.87 G 0.19 0.05 0.13 0000 --- --- --- --- 018753 05353 3' UTR A 0.80 0.75 0.78 T 0.20 0.25 0.22 0000 --- --- --- --- 018803 05403 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018848 05448 3' UTR C 0.57 0.48 0.52 T 0.43 0.52 0.48 0000 --- --- --- --- 018849 05449 3' UTR C 0.57 0.48 0.52 T 0.43 0.52 0.48 0000 --- --- --- --- 018985 05585 3' UTR A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 019200 05800 3' UTR A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 019331 05931 3' UTR C 0.54 0.48 0.51 T 0.46 0.52 0.49 0000 --- --- --- --- 019458 06058 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019676 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 019938 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 020001 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020450 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 020640 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020804 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000723: A 001007: A 004663: A 007435: GT 011069: C 013507: A 019676: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000519 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000903 00000 ------------ - 0.75 0.95 0.85 + 0.25 0.05 0.15 0000 --- --- --- --- 000989 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001066 00000 ------------ G 0.28 0.74 0.51 A 0.72 0.26 0.49 0000 --- --- --- --- 001131 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001206 00000 ------------ T 0.72 0.78 0.75 C 0.28 0.22 0.25 0000 --- --- --- --- 001499 00000 ------------ A 0.61 0.78 0.69 G 0.39 0.22 0.31 0000 --- --- --- --- 001746 00000 ------------ G 0.92 0.75 0.84 A 0.08 0.25 0.16 0000 --- --- --- --- 001870 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001987 00000 ------------ G 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 002668 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 002670 00000 ------------ G 0.98 0.84 0.91 T 0.02 0.16 0.09 0000 --- --- --- --- 002731 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003716 00000 ------------ - 1.00 0.93 0.97 + 0.00 0.07 0.03 0000 --- --- --- --- 003911 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004290 00000 ------------ - 0.05 0.18 0.11 + 0.95 0.82 0.89 0000 --- --- --- --- 004485 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 004738 00447 SYNON G 0.94 1.00 0.97 A 0.06 0.00 0.03 0134 CGG CGA ARG(R) ARG(R) 004759 00468 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0141 TCC TCT SER(S) SER(S) 004963 00672 3' UTR G 0.94 0.80 0.87 A 0.06 0.20 0.13 0000 --- --- --- --- 005843 01552 3' UTR C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 006007 01716 3' UTR T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 006049 01758 3' UTR C 0.95 0.79 0.87 T 0.05 0.21 0.13 0000 --- --- --- --- 006053 01762 3' UTR C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 006556 00000 ------------ - 0.93 0.78 0.86 + 0.07 0.22 0.14 0000 --- --- --- --- 007065 00000 ------------ A 0.92 0.72 0.82 C 0.08 0.28 0.18 0000 --- --- --- --- 007105 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007106 00000 ------------ C 0.93 0.72 0.83 T 0.07 0.28 0.17 0000 --- --- --- --- 007129 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 007150 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 007157 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 007168 00000 ------------ - 0.02 0.11 0.06 + 0.98 0.89 0.94 0000 --- --- --- --- 007184 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007205 00000 ------------ G 1.00 0.83 0.91 A 0.00 0.17 0.09 0000 --- --- --- --- 007223 00000 ------------ C 0.25 0.76 0.50 T 0.75 0.24 0.50 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000903: C 003716: T 004290: A 006556: TTTGTT 007168: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000238 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 000670 00000 ------------ T 0.97 0.75 0.85 C 0.03 0.25 0.15 0000 --- --- --- --- 000755 00000 ------------ A 1.00 0.93 0.96 G 0.00 0.07 0.04 0000 --- --- --- --- 000775 00000 ------------ C 0.97 0.95 0.96 T 0.03 0.05 0.04 0000 --- --- --- --- 001274 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001718 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 001748 00000 ------------ G 0.90 1.00 0.96 A 0.10 0.00 0.04 0000 --- --- --- --- 001803 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001845 00000 ------------ T 1.00 0.78 0.86 C 0.00 0.22 0.14 0000 --- --- --- --- 002101 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002164 00000 ------------ T 0.97 0.78 0.87 G 0.03 0.22 0.13 0000 --- --- --- --- 002676 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002832 00000 ------------ C 0.52 0.67 0.60 A 0.48 0.33 0.40 0000 --- --- --- --- 003275 00000 ------------ C 1.00 0.77 0.89 T 0.00 0.23 0.11 0000 --- --- --- --- 003281 00000 ------------ C 1.00 0.77 0.89 T 0.00 0.23 0.11 0000 --- --- --- --- 003292 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003405 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003420 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 003425 00000 ------------ A 0.70 0.67 0.69 G 0.30 0.33 0.31 0000 --- --- --- --- 003426 00000 ------------ C 0.70 0.67 0.69 T 0.30 0.33 0.31 0000 --- --- --- --- 003656 00000 ------------ G 1.00 0.79 0.90 A 0.00 0.21 0.10 0000 --- --- --- --- 003779 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003817 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003872 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004011 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004131 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 004589 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005020 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 005817 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005842 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006723 00380 SYNON C 0.98 0.98 0.98 T 0.02 0.02 0.02 0113 CCC CCT PRO(P) PRO(P) 006852 00509 SYNON A 0.98 1.00 0.99 T 0.02 0.00 0.01 0156 CCA CCT PRO(P) PRO(P) 007093 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007208 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 007348 00000 ------------ T 1.00 0.78 0.89 C 0.00 0.22 0.11 0000 --- --- --- --- 007506 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007685 00000 ------------ G 1.00 0.76 0.87 A 0.00 0.24 0.13 0000 --- --- --- --- 008254 00000 ------------ G 0.58 0.57 0.57 A 0.42 0.43 0.43 0000 --- --- --- --- 008258 00000 ------------ T 0.58 0.57 0.57 C 0.42 0.43 0.43 0000 --- --- --- --- 008269 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008592 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008806 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008839 00000 ------------ A 0.58 0.57 0.57 G 0.42 0.43 0.43 0000 --- --- --- --- 009027 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007208: GT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000393 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000509 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000544 00000 ------------ C 0.92 0.59 0.76 T 0.08 0.41 0.24 0000 --- --- --- --- 000549 00000 ------------ A 0.92 0.59 0.76 G 0.08 0.41 0.24 0000 --- --- --- --- 000576 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000663 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000730 00000 ------------ T 0.84 0.59 0.71 C 0.16 0.41 0.29 0000 --- --- --- --- 001922 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002142 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002147 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002810 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 002829 00000 ------------ G 0.83 0.43 0.64 A 0.17 0.57 0.36 0000 --- --- --- --- 003348 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004019 00000 ------------ A 0.89 0.59 0.73 G 0.11 0.41 0.27 0000 --- --- --- --- 004021 00000 ------------ A 0.89 0.61 0.74 G 0.11 0.39 0.26 0000 --- --- --- --- 004154 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 004262 00000 ------------ G 0.78 0.55 0.66 C 0.23 0.45 0.34 0000 --- --- --- --- 004539 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004567 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004625 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004803 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 005006 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005083 00170 SYNON C 0.88 0.43 0.66 G 0.12 0.57 0.34 0042 CCC CCG PRO(P) PRO(P) 005271 00000 ------------ C 0.78 0.43 0.61 T 0.22 0.57 0.39 0000 --- --- --- --- 005431 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 005435 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 005579 00000 ------------ C 0.90 0.43 0.66 G 0.10 0.57 0.34 0000 --- --- --- --- 005669 00000 ------------ G 0.71 1.00 0.86 A 0.29 0.00 0.14 0000 --- --- --- --- 005682 00000 ------------ C 0.75 1.00 0.88 T 0.25 0.00 0.12 0000 --- --- --- --- 005777 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 005926 00000 ------------ T 0.82 0.59 0.72 G 0.18 0.41 0.28 0000 --- --- --- --- 005962 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006020 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 006534 00000 ------------ C 0.41 0.81 0.58 G 0.59 0.19 0.42 0000 --- --- --- --- 007529 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 007637 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007818 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007849 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 007995 00000 ------------ C 0.84 0.42 0.65 T 0.16 0.58 0.35 0000 --- --- --- --- 008274 00413 SYNON C 0.53 0.69 0.61 T 0.47 0.31 0.39 0123 TAC TAT TYR(Y) TYR(Y) 008957 00000 ------------ G 0.92 0.71 0.81 T 0.08 0.29 0.19 0000 --- --- --- --- 009090 00000 ------------ - 0.86 1.00 0.93 + 0.14 0.00 0.07 0000 --- --- --- --- 009447 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009971 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010103 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010148 00000 ------------ A 0.41 0.72 0.57 G 0.59 0.28 0.43 0000 --- --- --- --- 010351 00000 ------------ T 0.81 0.34 0.57 C 0.19 0.66 0.43 0000 --- --- --- --- 010363 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010535 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010802 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 011212 00000 ------------ T 0.35 0.70 0.52 C 0.65 0.30 0.48 0000 --- --- --- --- 011344 00000 ------------ T 0.69 0.68 0.68 C 0.31 0.32 0.32 0000 --- --- --- --- 011394 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011893 00000 ------------ T 0.96 0.89 0.93 C 0.04 0.11 0.07 0000 --- --- --- --- 012113 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012114 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012150 00000 ------------ G 0.40 0.66 0.52 A 0.60 0.34 0.48 0000 --- --- --- --- 012686 00000 ------------ C 0.58 0.70 0.64 T 0.42 0.30 0.36 0000 --- --- --- --- 012957 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 012971 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 013050 00761 SYNON G 0.97 1.00 0.99 A 0.03 0.00 0.01 0239 GTG GTA VAL(V) VAL(V) 013439 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013479 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 013670 00000 ------------ - 0.23 0.02 0.12 + 0.78 0.98 0.88 0000 --- --- --- --- 013916 00000 ------------ T 0.70 0.35 0.52 C 0.30 0.65 0.48 0000 --- --- --- --- 014004 00000 ------------ T 0.37 0.65 0.51 G 0.63 0.35 0.49 0000 --- --- --- --- 014083 00000 ------------ T 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 014193 00876 NON-SYN T 1.00 0.98 0.99 C 0.00 0.02 0.01 0278 TTC CTC PHE(F) LEU(L) 014266 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015203 00000 ------------ C 0.62 0.72 0.67 A 0.38 0.28 0.33 0000 --- --- --- --- 015357 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015775 00000 ------------ C 0.81 0.93 0.87 T 0.19 0.07 0.13 0000 --- --- --- --- 016167 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 016220 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016331 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 016389 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 016393 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 016697 00000 ------------ - 0.87 0.97 0.92 + 0.13 0.03 0.08 0000 --- --- --- --- 016736 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016759 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016821 00000 ------------ A 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 016825 00000 ------------ A 0.52 0.73 0.62 C 0.48 0.27 0.38 0000 --- --- --- --- 017325 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017382 00000 ------------ C 0.69 0.72 0.70 T 0.31 0.28 0.30 0000 --- --- --- --- 017525 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018043 00000 ------------ T 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 018464 00000 ------------ C 0.74 0.34 0.52 A 0.26 0.66 0.48 0000 --- --- --- --- 018532 00000 ------------ A 0.95 0.74 0.83 C 0.05 0.26 0.17 0000 --- --- --- --- 019361 00000 ------------ A 0.76 0.95 0.86 G 0.24 0.05 0.14 0000 --- --- --- --- 019754 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019755 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019919 00000 ------------ A 0.50 0.71 0.60 G 0.50 0.29 0.40 0000 --- --- --- --- 020542 01396 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0451 ATT ACT ILE(I) THR(T) 020563 01417 NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 0458 AAT AGT ASN(N) SER(S) 020640 01494 TRUNCATION C 0.98 0.93 0.96 T 0.02 0.07 0.04 0484 CAG TAG GLN(Q) *** 020685 01539 NON-SYN T 0.95 1.00 0.98 C 0.05 0.00 0.02 0499 TGC CGC CYS(C) ARG(R) 020929 01783 3' UTR T 0.48 0.69 0.58 C 0.52 0.31 0.42 0000 --- --- --- --- 020944 01798 3' UTR A 0.54 0.69 0.61 G 0.46 0.31 0.39 0000 --- --- --- --- 020965 01819 3' UTR C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 020981 01835 3' UTR G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021162 02016 3' UTR T 0.77 0.98 0.87 C 0.23 0.02 0.13 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002810: G 007849: A 009090: T 013670: G 016697: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000632 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 000869 00000 ------------ G 0.79 0.91 0.85 C 0.21 0.09 0.15 0000 --- --- --- --- 002247 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002296 00000 ------------ G 0.80 0.91 0.86 C 0.20 0.09 0.14 0000 --- --- --- --- 002412 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002543 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002752 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 002774 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002987 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 003221 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003297 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003494 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003746 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004043 00000 ------------ A 0.71 0.91 0.80 T 0.29 0.09 0.20 0000 --- --- --- --- 004189 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 004354 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004565 00000 ------------ C 0.71 0.91 0.81 T 0.29 0.09 0.19 0000 --- --- --- --- 005281 00000 ------------ C 0.56 0.74 0.65 T 0.44 0.26 0.35 0000 --- --- --- --- 005383 00000 ------------ G 0.90 0.83 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 005489 00000 ------------ G 0.71 0.91 0.81 A 0.29 0.09 0.19 0000 --- --- --- --- 005555 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005640 00000 ------------ + 0.71 0.91 0.81 - 0.29 0.09 0.19 0000 --- --- --- --- 005675 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005789 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006114 00000 ------------ T 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 006141 00000 ------------ A 0.54 0.74 0.64 G 0.46 0.26 0.36 0000 --- --- --- --- 006148 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 006997 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007095 00000 ------------ C 0.85 0.83 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 007270 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007533 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007761 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008059 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008083 00000 ------------ G 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008138 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 008161 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008322 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008517 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008961 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008999 EXON6 -1 SPLICE G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009123 00000 ------------ C 0.58 0.73 0.65 A 0.42 0.27 0.35 0000 --- --- --- --- 009427 00000 ------------ T 0.73 0.91 0.82 C 0.27 0.09 0.18 0000 --- --- --- --- 009454 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 009848 00000 ------------ G 0.96 0.97 0.97 A 0.04 0.03 0.03 0000 --- --- --- --- 010608 00571 NON-SYN C 0.75 0.76 0.76 T 0.25 0.24 0.24 0175 TCC TTC SER(S) PHE(F) 010687 00650 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010764 00727 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010776 00739 3' UTR C 0.90 0.82 0.86 G 0.10 0.18 0.14 0000 --- --- --- --- 010876 00839 3' UTR G 0.58 0.73 0.65 A 0.42 0.27 0.35 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002987: A 005640: A 009454: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000198 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000288 00000 ------------ G 0.87 0.72 0.80 A 0.13 0.28 0.20 0000 --- --- --- --- 000518 00000 ------------ C 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 000559 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 000628 00000 ------------ C 0.88 0.76 0.82 T 0.12 0.24 0.18 0000 --- --- --- --- 000673 00000 ------------ T 0.80 0.66 0.73 C 0.20 0.34 0.27 0000 --- --- --- --- 001723 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001807 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002103 00000 ------------ C 0.79 1.00 0.88 T 0.21 0.00 0.12 0000 --- --- --- --- 002143 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 002264 00000 ------------ T 0.54 0.62 0.58 C 0.46 0.38 0.42 0000 --- --- --- --- 002420 00000 ------------ G 0.54 0.59 0.57 A 0.46 0.41 0.43 0000 --- --- --- --- 002913 00000 ------------ T 0.82 0.67 0.74 C 0.18 0.33 0.26 0000 --- --- --- --- 003272 00000 ------------ C 0.61 0.68 0.64 T 0.39 0.32 0.36 0000 --- --- --- --- 003543 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003631 00000 ------------ A 0.58 0.67 0.63 G 0.42 0.33 0.37 0000 --- --- --- --- 003664 00000 ------------ T 0.58 0.66 0.62 C 0.42 0.34 0.38 0000 --- --- --- --- 003755 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 003759 00000 ------------ G 0.88 0.67 0.78 A 0.12 0.33 0.22 0000 --- --- --- --- 004091 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004521 00000 ------------ C 0.89 0.74 0.82 T 0.11 0.26 0.18 0000 --- --- --- --- 004825 00000 ------------ C 0.98 0.68 0.83 T 0.02 0.32 0.17 0000 --- --- --- --- 004876 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005138 00000 ------------ C 0.61 0.70 0.66 T 0.39 0.30 0.34 0000 --- --- --- --- 006173 00000 ------------ C 0.79 0.67 0.73 T 0.21 0.33 0.27 0000 --- --- --- --- 006279 00000 ------------ T 0.89 0.74 0.82 A 0.11 0.26 0.18 0000 --- --- --- --- 006291 00000 ------------ G 0.91 0.74 0.83 A 0.09 0.26 0.17 0000 --- --- --- --- 006716 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007685 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007893 00000 ------------ A 0.89 0.73 0.81 C 0.11 0.27 0.19 0000 --- --- --- --- 007921 00000 ------------ G 0.59 0.68 0.64 A 0.41 0.32 0.36 0000 --- --- --- --- 007954 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 008014 00000 ------------ T 0.89 0.73 0.81 C 0.11 0.27 0.19 0000 --- --- --- --- 008126 00000 ------------ C 0.54 0.59 0.57 T 0.46 0.41 0.43 0000 --- --- --- --- 008225 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008389 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008852 00312 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0085 CGG CAG ARG(R) GLN(Q) 009289 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009316 00000 ------------ T 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- 009319 00000 ------------ T 0.88 0.74 0.81 C 0.12 0.26 0.19 0000 --- --- --- --- 009432 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009545 00000 ------------ G 0.81 0.70 0.76 A 0.19 0.30 0.24 0000 --- --- --- --- 009548 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009593 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009608 00000 ------------ C 0.88 0.73 0.80 T 0.12 0.27 0.20 0000 --- --- --- --- 009769 00000 ------------ - 0.88 0.73 0.80 + 0.12 0.27 0.20 0000 --- --- --- --- 009903 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 010519 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010520 00000 ------------ G 0.90 0.76 0.84 A 0.10 0.24 0.16 0000 --- --- --- --- 010747 00000 ------------ A 0.65 0.70 0.67 C 0.35 0.30 0.33 0000 --- --- --- --- 010760 00000 ------------ T 0.90 0.69 0.80 C 0.10 0.31 0.20 0000 --- --- --- --- 010876 00398 NON-SYN G 0.81 0.67 0.74 T 0.19 0.33 0.26 0114 GCA TCA ALA(A) SER(S) 010948 00470 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0138 GAC AAC ASP(D) ASN(N) 011271 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 011323 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011448 00000 ------------ C 0.89 0.70 0.80 T 0.11 0.30 0.20 0000 --- --- --- --- 011579 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 012091 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012662 00000 ------------ G 0.81 0.68 0.75 A 0.19 0.32 0.25 0000 --- --- --- --- 012687 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012705 00000 ------------ A 0.88 0.75 0.82 C 0.12 0.25 0.18 0000 --- --- --- --- 013270 00000 ------------ G 0.94 0.86 0.90 C 0.06 0.14 0.10 0000 --- --- --- --- 014416 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014761 00000 ------------ T 0.50 0.57 0.53 C 0.50 0.43 0.47 0000 --- --- --- --- 014767 00000 ------------ T 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 014837 00000 ------------ - 0.12 0.24 0.17 + 0.88 0.76 0.82 0000 --- --- --- --- 015216 00000 ------------ A 0.87 0.75 0.81 C 0.13 0.25 0.19 0000 --- --- --- --- 015454 00871 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0271 GCG GCA ALA(A) ALA(A) 015865 01282 3' UTR A 0.60 0.67 0.64 G 0.40 0.33 0.36 0000 --- --- --- --- 016018 01435 3' UTR T 0.83 0.67 0.75 C 0.17 0.33 0.25 0000 --- --- --- --- 016146 01563 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016376 01793 3' UTR T 0.77 1.00 0.86 A 0.23 0.00 0.14 0000 --- --- --- --- 016386 01803 3' UTR - 0.13 0.41 0.23 + 0.87 0.59 0.77 0000 --- --- --- --- 016591 02008 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 016616 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016814 00000 ------------ C 0.62 0.67 0.65 T 0.38 0.33 0.35 0000 --- --- --- --- 017012 00000 ------------ A 0.62 0.69 0.66 G 0.38 0.31 0.34 0000 --- --- --- --- 017081 00000 ------------ G 0.60 0.66 0.64 A 0.40 0.34 0.36 0000 --- --- --- --- 017393 00000 ------------ G 0.98 0.65 0.82 A 0.02 0.35 0.18 0000 --- --- --- --- 018006 00000 ------------ G 0.80 0.72 0.77 A 0.20 0.28 0.23 0000 --- --- --- --- 018268 00000 ------------ T 0.65 0.71 0.68 C 0.35 0.29 0.32 0000 --- --- --- --- 018311 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000559: C 003755: G 009769: GAT 011271: C 011579: C 014837: C 016386: TTCA 016616: TAGT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000302 00000 ------------ A 0.88 0.86 0.87 G 0.12 0.14 0.13 0000 --- --- --- --- 000500 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 000794 00000 ------------ C 0.40 0.82 0.60 T 0.60 0.18 0.40 0000 --- --- --- --- 000855 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001274 00000 ------------ T 0.38 0.83 0.60 C 0.62 0.17 0.40 0000 --- --- --- --- 001455 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 001913 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 001942 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001964 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002070 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002143 00000 ------------ T 0.56 0.82 0.68 C 0.44 0.18 0.32 0000 --- --- --- --- 002701 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002712 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 002714 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002766 00000 ------------ - 0.04 0.24 0.14 + 0.96 0.76 0.86 0000 --- --- --- --- 002824 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003298 00000 ------------ G 0.69 0.43 0.56 A 0.31 0.57 0.44 0000 --- --- --- --- 003535 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004006 00000 ------------ C 0.73 0.98 0.85 A 0.27 0.02 0.15 0000 --- --- --- --- 004068 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004070 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 004246 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 004325 00000 ------------ C 0.98 0.78 0.88 T 0.02 0.22 0.12 0000 --- --- --- --- 004392 00000 ------------ T 0.88 0.70 0.79 C 0.12 0.30 0.21 0000 --- --- --- --- 004505 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005200 00000 ------------ G 0.77 0.55 0.66 A 0.23 0.45 0.34 0000 --- --- --- --- 005277 00401 SYNON C 0.88 0.75 0.82 T 0.12 0.25 0.18 0105 TTC TTT PHE(F) PHE(F) 005916 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006293 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006334 00000 ------------ G 0.84 0.74 0.79 A 0.16 0.26 0.21 0000 --- --- --- --- 006873 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006874 00000 ------------ G 0.87 0.72 0.79 A 0.13 0.28 0.21 0000 --- --- --- --- 006909 00000 ------------ - 0.17 0.28 0.23 + 0.82 0.72 0.77 0000 --- --- --- --- 007114 00000 ------------ C 0.75 0.96 0.85 T 0.25 0.04 0.15 0000 --- --- --- --- 007135 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007154 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007275 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007277 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008234 01401 3' UTR G 0.85 0.72 0.79 C 0.15 0.28 0.21 0000 --- --- --- --- 008449 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 008546 00000 ------------ C 0.62 0.93 0.78 T 0.38 0.07 0.22 0000 --- --- --- --- 009077 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 009198 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 011787 00000 ------------ G 0.79 0.72 0.76 T 0.21 0.28 0.24 0000 --- --- --- --- 012764 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012885 00000 ------------ G 0.83 0.54 0.69 A 0.17 0.46 0.31 0000 --- --- --- --- 013501 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014140 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014179 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014226 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014365 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014374 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014674 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 015036 00000 ------------ C 0.85 0.72 0.79 A 0.15 0.28 0.21 0000 --- --- --- --- 015041 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015079 00000 ------------ C 0.80 0.96 0.88 G 0.20 0.04 0.12 0000 --- --- --- --- 015235 00000 ------------ C 0.54 0.96 0.74 G 0.46 0.04 0.26 0000 --- --- --- --- 015409 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 015573 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015801 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016837 00000 ------------ C 0.90 1.00 0.94 T 0.10 0.00 0.06 0000 --- --- --- --- 016996 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000500: TGGT 001455: CT 002766: T 004070: GTTTT 004246: T 006909: TT 016996: ATAAAATAT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000248 00000 ------------ G 0.65 0.91 0.77 T 0.35 0.09 0.23 0000 --- --- --- --- 000996 00000 ------------ T 0.69 0.53 0.62 A 0.31 0.47 0.38 0000 --- --- --- --- 001241 00000 ------------ C 1.00 0.60 0.81 T 0.00 0.40 0.19 0000 --- --- --- --- 001283 00000 ------------ T 0.65 0.90 0.76 C 0.35 0.10 0.24 0000 --- --- --- --- 001303 00000 ------------ C 0.65 0.90 0.76 A 0.35 0.10 0.24 0000 --- --- --- --- 002122 00000 ------------ T 0.65 0.57 0.61 C 0.35 0.43 0.39 0000 --- --- --- --- 002228 00000 ------------ T 0.61 0.89 0.75 G 0.39 0.11 0.25 0000 --- --- --- --- 002246 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002337 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002379 00000 ------------ C 0.91 0.93 0.92 G 0.09 0.07 0.08 0000 --- --- --- --- 002563 00000 ------------ A 0.86 0.95 0.91 G 0.14 0.05 0.09 0000 --- --- --- --- 002569 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 002631 00000 ------------ G 0.47 0.58 0.53 A 0.53 0.42 0.47 0000 --- --- --- --- 002660 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 002915 00000 ------------ T 0.97 0.66 0.81 C 0.03 0.34 0.19 0000 --- --- --- --- 002953 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 002954 00000 ------------ C 0.97 0.66 0.81 T 0.03 0.34 0.19 0000 --- --- --- --- 002955 00000 ------------ A 0.97 0.66 0.81 G 0.03 0.34 0.19 0000 --- --- --- --- 003037 00000 ------------ - 1.00 0.77 0.89 + 0.00 0.23 0.11 0000 --- --- --- --- 003093 00000 ------------ G 0.97 1.00 0.98 A 0.03 0.00 0.02 0000 --- --- --- --- 003215 00000 ------------ A 0.97 1.00 0.98 G 0.03 0.00 0.02 0000 --- --- --- --- 003278 00000 ------------ A 0.97 1.00 0.98 C 0.03 0.00 0.02 0000 --- --- --- --- 003284 00000 ------------ T 0.97 1.00 0.98 C 0.03 0.00 0.02 0000 --- --- --- --- 003552 00000 ------------ A 1.00 0.68 0.84 G 0.00 0.33 0.16 0000 --- --- --- --- 003659 00000 ------------ G 0.89 0.89 0.89 C 0.11 0.11 0.11 0000 --- --- --- --- 003682 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003686 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003954 00000 ------------ A 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 004000 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004001 00000 ------------ G 0.89 0.91 0.90 A 0.11 0.09 0.10 0000 --- --- --- --- 004015 00000 ------------ C 0.71 1.00 0.86 T 0.29 0.00 0.14 0000 --- --- --- --- 004255 00000 ------------ C 0.95 0.57 0.76 T 0.05 0.43 0.24 0000 --- --- --- --- 004581 00000 ------------ G 0.87 0.89 0.88 A 0.13 0.11 0.12 0000 --- --- --- --- 004590 00000 ------------ C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 004606 00000 ------------ A 0.59 0.46 0.52 C 0.41 0.54 0.48 0000 --- --- --- --- 004649 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004734 00000 ------------ A 0.78 0.54 0.66 G 0.22 0.46 0.34 0000 --- --- --- --- 004758 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004870 00000 ------------ T 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 004890 00000 ------------ G 0.63 1.00 0.82 A 0.37 0.00 0.18 0000 --- --- --- --- 005273 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005392 00000 ------------ T 1.00 0.69 0.86 A 0.00 0.31 0.14 0000 --- --- --- --- 005406 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 005438 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 005678 00000 ------------ T 0.85 0.88 0.87 C 0.15 0.12 0.13 0000 --- --- --- --- 005865 00000 ------------ A 0.84 0.53 0.70 G 0.16 0.47 0.30 0000 --- --- --- --- 005951 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005996 00000 ------------ A 0.79 0.95 0.86 G 0.21 0.05 0.14 0000 --- --- --- --- 006025 00000 ------------ G 0.93 0.57 0.76 T 0.07 0.43 0.24 0000 --- --- --- --- 006074 00024 5' UTR G 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 006137 00087 5' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006213 00163 5' UTR C 0.72 1.00 0.86 T 0.28 0.00 0.14 0000 --- --- --- --- 006329 00279 5' UTR C 0.65 0.89 0.76 T 0.35 0.11 0.24 0000 --- --- --- --- 006357 00307 5' UTR G 0.77 0.55 0.66 T 0.23 0.45 0.34 0000 --- --- --- --- 006368 00318 5' UTR G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 006844 00000 ------------ G 0.74 0.37 0.55 A 0.26 0.63 0.45 0000 --- --- --- --- 007082 00000 ------------ T 0.39 0.89 0.64 C 0.61 0.11 0.36 0000 --- --- --- --- 007096 00000 ------------ C 0.42 0.89 0.65 T 0.58 0.11 0.35 0000 --- --- --- --- 007115 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 007744 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 007781 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 007799 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008228 00000 ------------ G 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 008280 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008289 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008306 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 008468 00552 NON-SYN C 0.56 0.59 0.57 T 0.44 0.41 0.43 0044 ACA ATA THR(T) ILE(I) 008489 00573 NON-SYN A 0.73 0.67 0.70 C 0.27 0.33 0.30 0051 GAC GCC ASP(D) ALA(A) 008637 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008684 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 009137 00920 3' UTR C 0.90 0.74 0.82 T 0.10 0.26 0.18 0000 --- --- --- --- 009184 00967 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009278 01061 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 009396 01179 3' UTR G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009423 01206 3' UTR T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 009475 01258 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009498 01281 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 009503 01286 3' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009611 00000 ------------ T 0.94 0.98 0.96 C 0.06 0.02 0.04 0000 --- --- --- --- 009995 00000 ------------ T 0.81 0.96 0.89 C 0.19 0.04 0.11 0000 --- --- --- --- 010186 00000 ------------ T 0.78 0.93 0.86 C 0.22 0.07 0.14 0000 --- --- --- --- 010326 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010590 00000 ------------ C 0.56 0.59 0.57 G 0.44 0.41 0.43 0000 --- --- --- --- 010687 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010895 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 010976 00000 ------------ C 0.55 0.59 0.57 A 0.45 0.41 0.43 0000 --- --- --- --- 010991 00000 ------------ A 0.55 0.59 0.57 G 0.45 0.41 0.43 0000 --- --- --- --- 011041 00000 ------------ C 0.55 0.59 0.57 T 0.45 0.41 0.43 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003037: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000100 00000 ------------ A 0.63 0.57 0.60 G 0.37 0.43 0.40 0000 --- --- --- --- 000242 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 000297 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000350 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000364 00000 ------------ G 0.69 0.76 0.72 A 0.31 0.24 0.28 0000 --- --- --- --- 000537 00000 ------------ C 1.00 0.61 0.81 A 0.00 0.39 0.19 0000 --- --- --- --- 000880 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001215 00000 ------------ C 0.77 0.61 0.70 T 0.23 0.39 0.30 0000 --- --- --- --- 001616 00000 ------------ C 1.00 0.64 0.83 G 0.00 0.36 0.17 0000 --- --- --- --- 001637 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 002432 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002771 00000 ------------ T 0.65 0.80 0.72 C 0.35 0.20 0.28 0000 --- --- --- --- 002828 00000 ------------ - 0.08 0.39 0.23 + 0.92 0.61 0.77 0000 --- --- --- --- 003640 00000 ------------ - 0.71 0.50 0.66 + 0.29 0.50 0.34 0000 --- --- --- --- 003645 00000 ------------ A 0.71 0.62 0.69 T 0.29 0.38 0.31 0000 --- --- --- --- 004076 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004100 00000 ------------ T 0.52 0.54 0.53 C 0.48 0.46 0.47 0000 --- --- --- --- 004193 00000 ------------ A 1.00 0.61 0.81 T 0.00 0.39 0.19 0000 --- --- --- --- 004367 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004732 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004742 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005043 00000 ------------ C 0.85 0.68 0.77 G 0.15 0.32 0.23 0000 --- --- --- --- 005045 00000 ------------ A 0.85 0.68 0.77 C 0.15 0.32 0.23 0000 --- --- --- --- 005124 00167 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0002 GTC GTT VAL(V) VAL(V) 005217 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005437 00000 ------------ C 0.62 1.00 0.81 T 0.38 0.00 0.19 0000 --- --- --- --- 005505 00000 ------------ A 0.83 0.54 0.69 G 0.17 0.46 0.31 0000 --- --- --- --- 005558 00000 ------------ T 0.90 0.89 0.89 C 0.10 0.11 0.11 0000 --- --- --- --- 005616 00000 ------------ A 0.83 0.55 0.70 T 0.17 0.45 0.30 0000 --- --- --- --- 005662 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005669 00000 ------------ C 0.85 0.55 0.70 T 0.15 0.45 0.30 0000 --- --- --- --- 005822 00000 ------------ - 0.83 0.54 0.69 + 0.17 0.46 0.31 0000 --- --- --- --- 005858 00000 ------------ C 0.83 0.54 0.69 T 0.17 0.46 0.31 0000 --- --- --- --- 005868 00000 ------------ T 0.83 0.54 0.69 C 0.17 0.46 0.31 0000 --- --- --- --- 006735 00000 ------------ A 0.83 0.55 0.69 G 0.17 0.45 0.31 0000 --- --- --- --- 006805 00000 ------------ C 0.83 0.55 0.69 G 0.17 0.45 0.31 0000 --- --- --- --- 007110 00000 ------------ G 0.86 0.55 0.70 C 0.14 0.45 0.30 0000 --- --- --- --- 007256 00000 ------------ - 0.16 0.46 0.31 + 0.84 0.54 0.69 0000 --- --- --- --- 007280 00000 ------------ A 0.82 0.54 0.68 G 0.18 0.46 0.32 0000 --- --- --- --- 007320 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007363 00000 ------------ C 0.86 0.54 0.70 T 0.14 0.46 0.30 0000 --- --- --- --- 007439 00000 ------------ C 0.86 0.54 0.70 A 0.14 0.46 0.30 0000 --- --- --- --- 007487 00000 ------------ T 0.86 0.54 0.70 C 0.14 0.46 0.30 0000 --- --- --- --- 007488 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 007524 00000 ------------ G 0.86 0.54 0.70 A 0.14 0.46 0.30 0000 --- --- --- --- 007544 00000 ------------ A 0.61 0.46 0.53 G 0.39 0.54 0.47 0000 --- --- --- --- 007555 00000 ------------ G 0.59 1.00 0.80 A 0.41 0.00 0.20 0000 --- --- --- --- 007556 00000 ------------ T 0.86 0.54 0.70 G 0.14 0.46 0.30 0000 --- --- --- --- 007719 00000 ------------ C 0.88 0.53 0.69 T 0.12 0.47 0.31 0000 --- --- --- --- 007830 00301 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0047 AAT AGT ASN(N) SER(S) 008260 00530 SYNON G 0.98 1.00 0.99 C 0.02 0.00 0.01 0123 ACG ACC THR(T) THR(T) 008581 00851 3' UTR C 0.70 0.50 0.60 T 0.30 0.50 0.40 0000 --- --- --- --- 008635 00905 3' UTR G 0.70 0.52 0.61 A 0.30 0.48 0.39 0000 --- --- --- --- 008685 00955 3' UTR A 0.71 0.52 0.61 C 0.29 0.48 0.39 0000 --- --- --- --- 008760* 008777 01047 3' UTR G 0.69 0.50 0.60 A 0.31 0.50 0.40 0000 --- --- --- --- 008837 01107 3' UTR C 0.69 0.52 0.61 T 0.31 0.48 0.39 0000 --- --- --- --- 008919 01189 3' UTR G 0.69 0.52 0.61 C 0.31 0.48 0.39 0000 --- --- --- --- 008940 01210 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009222 01492 3' UTR T 1.00 0.62 0.83 C 0.00 0.38 0.17 0000 --- --- --- --- 009305 01575 3' UTR C 0.69 0.55 0.62 T 0.31 0.45 0.38 0000 --- --- --- --- 009441 01711 3' UTR C 0.65 0.91 0.77 A 0.35 0.09 0.23 0000 --- --- --- --- 009476 01746 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009709 01979 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009758 02028 3' UTR C 0.69 0.54 0.62 T 0.31 0.46 0.38 0000 --- --- --- --- 009992 02262 3' UTR C 0.65 0.91 0.77 T 0.35 0.09 0.23 0000 --- --- --- --- 009993 02263 3' UTR A 0.65 0.91 0.77 G 0.35 0.09 0.23 0000 --- --- --- --- 010240 02510 3' UTR G 0.65 0.88 0.76 T 0.35 0.12 0.24 0000 --- --- --- --- 010261 02531 3' UTR T 0.96 0.95 0.96 C 0.04 0.05 0.04 0000 --- --- --- --- 010273 02543 3' UTR C 0.65 0.88 0.76 T 0.35 0.12 0.24 0000 --- --- --- --- 010346 02616 3' UTR G 0.65 0.88 0.76 A 0.35 0.12 0.24 0000 --- --- --- --- 010354 02624 3' UTR T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 010553 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 010664 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011256 00000 ------------ T 0.92 0.93 0.92 G 0.08 0.07 0.08 0000 --- --- --- --- 011470 00000 ------------ C 0.65 0.89 0.76 T 0.35 0.11 0.24 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002828: T 003640: A 005822: CT 007256: AT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 008760 01030 3' UTR A 0.31 0.48 0.39 C 0.04 0.00 0.02 T 0.65 0.52 0.59 0000 --- --- --- --- --- --- Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001199 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 001277 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 001306 00000 ------------ C 0.85 0.68 0.77 T 0.15 0.32 0.23 0000 --- --- --- --- 001742 00000 ------------ T 0.74 0.50 0.62 C 0.26 0.50 0.38 0000 --- --- --- --- 001985 00000 ------------ - 0.85 1.00 0.92 + 0.15 0.00 0.08 0000 --- --- --- --- 002739 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003330 00000 ------------ T 1.00 0.61 0.82 G 0.00 0.39 0.18 0000 --- --- --- --- 003374 00000 ------------ T 0.77 0.48 0.63 C 0.23 0.52 0.37 0000 --- --- --- --- 004207 00000 ------------ A 0.63 0.72 0.67 T 0.37 0.28 0.33 0000 --- --- --- --- 004526 00000 ------------ T 0.63 0.72 0.67 G 0.37 0.28 0.33 0000 --- --- --- --- 004593 00000 ------------ - 0.76 0.53 0.65 + 0.24 0.47 0.35 0000 --- --- --- --- 004697 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004880 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005175 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005419 00000 ------------ G 0.75 0.48 0.61 T 0.25 0.52 0.39 0000 --- --- --- --- 005886 00000 ------------ T 0.75 0.81 0.78 C 0.25 0.19 0.22 0000 --- --- --- --- 006399 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 006448 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006496 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006506 00000 ------------ G 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 006530 00000 ------------ - 0.25 0.22 0.23 + 0.75 0.78 0.77 0000 --- --- --- --- 006535 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 006540 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006917 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007186 00000 ------------ G 0.85 0.63 0.74 A 0.15 0.37 0.26 0000 --- --- --- --- 007227 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007240 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007660 00000 ------------ A 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 007715 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007872 00000 ------------ - 0.14 0.00 0.07 + 0.86 1.00 0.93 0000 --- --- --- --- 007898 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007984 00000 ------------ G 0.75 1.00 0.88 T 0.25 0.00 0.12 0000 --- --- --- --- 008029 00000 ------------ G 0.78 0.68 0.72 A 0.23 0.33 0.28 0000 --- --- --- --- 008487 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 008780 00000 ------------ T 0.98 0.80 0.89 C 0.02 0.20 0.11 0000 --- --- --- --- 008848 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008873 00000 ------------ A 0.78 0.66 0.72 T 0.22 0.34 0.28 0000 --- --- --- --- 009088 00000 ------------ G 0.93 0.71 0.83 T 0.07 0.29 0.17 0000 --- --- --- --- 009099 00000 ------------ C 0.93 0.71 0.83 T 0.07 0.29 0.17 0000 --- --- --- --- 010019 00000 ------------ A 1.00 0.63 0.82 C 0.00 0.37 0.18 0000 --- --- --- --- 010131 00035 NON-SYN G 0.74 0.72 0.73 A 0.26 0.28 0.27 0012 CGG CAG ARG(R) GLN(Q) 010794 00188 NON-SYN T 0.94 1.00 0.97 C 0.06 0.00 0.03 0063 ATC ACC ILE(I) THR(T) 010975 00000 ------------ T 0.98 0.80 0.89 C 0.02 0.20 0.11 0000 --- --- --- --- 011109 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011231 00000 ------------ C 1.00 0.80 0.90 T 0.00 0.20 0.10 0000 --- --- --- --- 011306 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011434 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 011539 00000 ------------ A 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 011837 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012100 00400 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0134 GGA AGA GLY(G) ARG(R) 012299 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012336 00000 ------------ C 0.93 0.85 0.89 T 0.07 0.15 0.11 0000 --- --- --- --- 013763 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 014110 00000 ------------ C 0.76 0.62 0.69 G 0.24 0.38 0.31 0000 --- --- --- --- 014143 00000 ------------ T 1.00 0.64 0.83 C 0.00 0.36 0.17 0000 --- --- --- --- 014958 00000 ------------ A 0.98 0.91 0.94 T 0.02 0.09 0.06 0000 --- --- --- --- 015060 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 015176 00000 ------------ G 0.70 0.85 0.78 A 0.30 0.15 0.22 0000 --- --- --- --- 015370 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 015848 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 016394 00000 ------------ - 0.03 0.02 0.02 + 0.97 0.98 0.98 0000 --- --- --- --- 016744 00000 ------------ T 0.38 1.00 0.66 C 0.62 0.00 0.34 0000 --- --- --- --- 017020 00000 ------------ T 0.93 0.38 0.69 A 0.07 0.62 0.31 0000 --- --- --- --- 017693 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 017866 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 017898 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 018189 00000 ------------ A 0.50 0.98 0.74 G 0.50 0.02 0.26 0000 --- --- --- --- 018748 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 018828 00000 ------------ G 0.93 0.55 0.74 A 0.07 0.45 0.26 0000 --- --- --- --- 018976 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 018990 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001985: T 004593: CAC 006530: AT 007872: GACAAACT 016394: TA 017898: ATC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000531 00000 ------------ C 0.73 0.96 0.84 A 0.27 0.04 0.16 0000 --- --- --- --- 000534 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000651 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000772 00000 ------------ C 0.73 0.96 0.84 T 0.27 0.04 0.16 0000 --- --- --- --- 000816 00000 ------------ C 0.72 0.96 0.84 T 0.28 0.04 0.16 0000 --- --- --- --- 001033 00000 ------------ C 0.73 0.96 0.84 T 0.27 0.04 0.16 0000 --- --- --- --- 001082 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 001217 00000 ------------ C 0.92 0.30 0.62 T 0.08 0.70 0.38 0000 --- --- --- --- 001278 00000 ------------ T 0.73 0.96 0.84 C 0.27 0.04 0.16 0000 --- --- --- --- 001402 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001828 00000 ------------ C 0.75 0.95 0.85 T 0.25 0.05 0.15 0000 --- --- --- --- 001868 00000 ------------ T 0.75 0.95 0.85 A 0.25 0.05 0.15 0000 --- --- --- --- 001890 00000 ------------ A 0.75 0.95 0.85 T 0.25 0.05 0.15 0000 --- --- --- --- 001928 00000 ------------ A 0.76 0.95 0.86 G 0.24 0.05 0.14 0000 --- --- --- --- 001934 00000 ------------ G 0.75 0.95 0.85 C 0.25 0.05 0.15 0000 --- --- --- --- 002163 00000 ------------ - 0.75 0.95 0.85 + 0.25 0.05 0.15 0000 --- --- --- --- 002288 00000 ------------ G 0.92 0.67 0.78 A 0.08 0.33 0.22 0000 --- --- --- --- 002344 00000 ------------ G 0.75 0.95 0.86 A 0.25 0.05 0.14 0000 --- --- --- --- 002403 00000 ------------ G 0.81 0.95 0.88 C 0.19 0.05 0.12 0000 --- --- --- --- 002432 00000 ------------ A 0.79 0.94 0.87 C 0.21 0.06 0.13 0000 --- --- --- --- 002590 00000 ------------ C 0.73 0.96 0.84 T 0.27 0.04 0.16 0000 --- --- --- --- 002652 00000 ------------ T 0.73 0.96 0.84 C 0.27 0.04 0.16 0000 --- --- --- --- 002757 00000 ------------ T 0.92 0.30 0.62 C 0.08 0.70 0.38 0000 --- --- --- --- 002786 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002832 00134 NON-SYN G 0.92 0.30 0.62 T 0.08 0.70 0.38 0031 GGA GTA GLY(G) VAL(V) 002864 00166 NON-SYN A 0.75 0.30 0.53 G 0.25 0.70 0.47 0042 ACC GCC THR(T) ALA(A) 002972 00000 ------------ G 0.92 0.30 0.62 A 0.08 0.70 0.38 0000 --- --- --- --- 003578 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 003643 00000 ------------ A 0.92 0.30 0.62 G 0.08 0.70 0.38 0000 --- --- --- --- 003725 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003748 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003888 00000 ------------ C 0.73 0.96 0.84 G 0.27 0.04 0.16 0000 --- --- --- --- 003933 00000 ------------ C 0.73 0.96 0.84 G 0.27 0.04 0.16 0000 --- --- --- --- 003960 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003963 00000 ------------ C 0.67 1.00 0.83 A 0.33 0.00 0.17 0000 --- --- --- --- 003976 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004022 00000 ------------ A 0.73 0.96 0.84 G 0.27 0.04 0.16 0000 --- --- --- --- 004097 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004119 00000 ------------ A 0.73 0.96 0.84 G 0.27 0.04 0.16 0000 --- --- --- --- 004120 00000 ------------ C 0.73 0.96 0.84 T 0.27 0.04 0.16 0000 --- --- --- --- 004344 00000 ------------ C 0.73 0.95 0.83 T 0.27 0.05 0.17 0000 --- --- --- --- 004422 00000 ------------ A 0.73 0.95 0.83 G 0.27 0.05 0.17 0000 --- --- --- --- 004735 00000 ------------ T 0.73 0.94 0.82 G 0.27 0.06 0.18 0000 --- --- --- --- 005709 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006723 00365 NON-SYN C 0.75 0.98 0.86 T 0.25 0.02 0.14 0108 CCG CTG PRO(P) LEU(L) 006882 00000 ------------ G 0.75 0.97 0.86 A 0.25 0.03 0.14 0000 --- --- --- --- 006909 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007026 00000 ------------ G 0.75 0.98 0.86 A 0.25 0.02 0.14 0000 --- --- --- --- 007176 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007231 00000 ------------ - 0.55 0.00 0.19 + 0.45 1.00 0.81 0000 --- --- --- --- 007345 00000 ------------ G 0.92 1.00 0.97 A 0.08 0.00 0.03 0000 --- --- --- --- 007416 00000 ------------ T 0.54 1.00 0.77 G 0.46 0.00 0.23 0000 --- --- --- --- 007640 00496 NON-SYN C 0.96 1.00 0.98 T 0.04 0.00 0.02 0152 CGG TGG ARG(R) TRP(W) 007676 00532 NON-SYN T 0.74 0.98 0.86 C 0.26 0.02 0.14 0164 TGG CGG TRP(W) ARG(R) 007838 00694 NON-SYN G 0.73 0.96 0.84 A 0.27 0.04 0.16 0218 GAT AAT ASP(D) ASN(N) 008028 00000 ------------ C 0.73 0.96 0.84 A 0.27 0.04 0.16 0000 --- --- --- --- 008116 00000 ------------ C 0.38 0.96 0.66 T 0.62 0.04 0.34 0000 --- --- --- --- 008390 00000 ------------ - 0.30 0.06 0.19 + 0.70 0.94 0.81 0000 --- --- --- --- 008412 00000 ------------ T 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002163: T 007231: T 008390: GAGG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000129 00000 ------------ C 0.67 0.76 0.72 T 0.33 0.24 0.28 0000 --- --- --- --- 000143 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000196 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000251 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 000393 00000 ------------ T 0.63 0.57 0.60 C 0.37 0.43 0.40 0000 --- --- --- --- 000595 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 000661 00000 ------------ A 0.63 0.57 0.60 C 0.37 0.43 0.40 0000 --- --- --- --- 001656 00000 ------------ A 0.87 0.95 0.91 T 0.13 0.05 0.09 0000 --- --- --- --- 001821 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 001934 00000 ------------ C 0.80 0.83 0.82 T 0.20 0.17 0.18 0000 --- --- --- --- 001979 00028 5' UTR C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 002106 00000 ------------ C 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 002271 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002330 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002604 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002627 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002677 00000 ------------ G 0.80 0.83 0.82 A 0.20 0.17 0.18 0000 --- --- --- --- 002702 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003102 00000 ------------ C 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 003126 00000 ------------ G 0.87 0.93 0.90 A 0.13 0.07 0.10 0000 --- --- --- --- 003205 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003270 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 003620 00000 ------------ C 0.83 0.43 0.62 T 0.17 0.57 0.38 0000 --- --- --- --- 003684 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003769 00000 ------------ C 0.82 0.83 0.83 T 0.17 0.17 0.17 0000 --- --- --- --- 003820 00000 ------------ G 0.86 0.93 0.90 C 0.14 0.07 0.10 0000 --- --- --- --- 003881 00000 ------------ G 1.00 0.61 0.80 A 0.00 0.39 0.20 0000 --- --- --- --- 004021 00000 ------------ C 0.88 0.80 0.83 T 0.12 0.20 0.17 0000 --- --- --- --- 004338 00000 ------------ T 0.87 0.95 0.91 A 0.13 0.05 0.09 0000 --- --- --- --- 004991 00000 ------------ C 0.83 0.82 0.82 T 0.17 0.18 0.18 0000 --- --- --- --- 005248 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005371 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006058 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 006062 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006102 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007023 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007164 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007275 00000 ------------ C 0.70 1.00 0.86 T 0.30 0.00 0.14 0000 --- --- --- --- 007396 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007400 00000 ------------ - 0.11 0.00 0.05 + 0.89 1.00 0.95 0000 --- --- --- --- 007602 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 007649 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007808 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 007841 00000 ------------ A 0.73 1.00 0.87 G 0.27 0.00 0.13 0000 --- --- --- --- 007866 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008009 00000 ------------ - 0.09 0.37 0.23 + 0.91 0.63 0.77 0000 --- --- --- --- 008219 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008329 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008359 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008360 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008398 00000 ------------ A 0.72 0.98 0.85 C 0.28 0.02 0.15 0000 --- --- --- --- 008834 00000 ------------ T 0.85 0.63 0.74 C 0.15 0.37 0.26 0000 --- --- --- --- 009019 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009388 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011792 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 011956 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012006 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012070 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012348 00000 ------------ C 0.83 0.62 0.74 T 0.17 0.38 0.26 0000 --- --- --- --- 012393 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 012461 00000 ------------ - 0.17 0.38 0.27 + 0.83 0.62 0.73 0000 --- --- --- --- 012722 00000 ------------ G 0.83 0.64 0.74 C 0.17 0.36 0.26 0000 --- --- --- --- 013109 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013248 00000 ------------ - 0.00 0.37 0.18 + 1.00 0.63 0.82 0000 --- --- --- --- 013598 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 013723 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 013745 00000 ------------ T 0.71 0.61 0.66 C 0.29 0.39 0.34 0000 --- --- --- --- 013823 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 013843 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 014016 00000 ------------ T 0.72 0.61 0.67 C 0.28 0.39 0.33 0000 --- --- --- --- 014026 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014104 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014112 00000 ------------ T 0.72 0.61 0.67 C 0.28 0.39 0.33 0000 --- --- --- --- 014169 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 016518 00000 ------------ A 0.73 1.00 0.87 G 0.27 0.00 0.13 0000 --- --- --- --- 016618 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016632 00000 ------------ C 0.85 0.96 0.90 A 0.15 0.04 0.10 0000 --- --- --- --- 016848 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017207 00000 ------------ C 0.98 0.64 0.82 T 0.02 0.36 0.18 0000 --- --- --- --- 017221 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 017227 00000 ------------ C 1.00 0.64 0.83 T 0.00 0.36 0.17 0000 --- --- --- --- 017305 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017308 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017341 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017355 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017408 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017440 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017645 00000 ------------ G 0.74 0.47 0.62 A 0.26 0.53 0.38 0000 --- --- --- --- 019131 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019190 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 019371 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019374 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019394 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019498 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019629 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021212 00000 ------------ G 0.58 0.54 0.56 A 0.42 0.46 0.44 0000 --- --- --- --- 021282 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021293 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021297 00000 ------------ C 0.88 0.63 0.76 T 0.12 0.37 0.24 0000 --- --- --- --- 021518 00000 ------------ G 0.67 0.63 0.65 T 0.33 0.37 0.35 0000 --- --- --- --- 021527 00000 ------------ C 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 021852 00000 ------------ T 0.71 0.63 0.67 C 0.29 0.37 0.33 0000 --- --- --- --- 022145 00000 ------------ C 0.69 0.63 0.66 G 0.31 0.37 0.34 0000 --- --- --- --- 022147 00000 ------------ A 0.50 0.52 0.51 G 0.50 0.48 0.49 0000 --- --- --- --- 022278 00000 ------------ G 0.94 0.93 0.94 T 0.06 0.07 0.06 0000 --- --- --- --- 022412 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 022742 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022764 00000 ------------ T 0.96 0.63 0.80 C 0.04 0.37 0.20 0000 --- --- --- --- 022934 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023089 00075 5' UTR G 0.52 0.48 0.50 A 0.48 0.52 0.50 0000 --- --- --- --- 023236 00000 ------------ G 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 023388 00000 ------------ G 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 023441 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 023765 00210 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0036 CGC TGC ARG(R) CYS(C) 023815 00000 ------------ G 0.98 0.89 0.93 C 0.02 0.11 0.07 0000 --- --- --- --- 024211 00000 ------------ G 0.71 1.00 0.85 C 0.29 0.00 0.15 0000 --- --- --- --- 024305 00000 ------------ C 0.81 0.89 0.85 T 0.19 0.11 0.15 0000 --- --- --- --- 024442 00000 ------------ T 0.68 1.00 0.85 G 0.32 0.00 0.15 0000 --- --- --- --- 024731 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024769 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024783 00000 ------------ T 0.93 0.93 0.93 C 0.07 0.07 0.07 0000 --- --- --- --- 024920 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025049 00000 ------------ G 1.00 0.67 0.84 C 0.00 0.33 0.16 0000 --- --- --- --- 025572 00000 ------------ C 0.35 0.72 0.55 G 0.65 0.28 0.45 0000 --- --- --- --- 025688 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 025902 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 025937 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 025942 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 026421 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 026507 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026564 00000 ------------ G 0.84 0.72 0.78 C 0.16 0.28 0.22 0000 --- --- --- --- 026620 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026679 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027143 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 027204 00000 ------------ C 0.94 0.50 0.72 T 0.06 0.50 0.28 0000 --- --- --- --- 027386 00000 ------------ T 0.58 0.48 0.53 C 0.42 0.52 0.47 0000 --- --- --- --- 027604 00000 ------------ C 0.85 0.80 0.83 T 0.15 0.20 0.17 0000 --- --- --- --- 027649 00000 ------------ - 0.33 0.02 0.18 + 0.67 0.98 0.82 0000 --- --- --- --- 028016 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 028117 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028145 00000 ------------ C 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 028497 00000 ------------ A 0.76 0.72 0.74 T 0.24 0.28 0.26 0000 --- --- --- --- 028735 00000 ------------ C 0.81 0.98 0.89 G 0.19 0.02 0.11 0000 --- --- --- --- 028836 00000 ------------ G 0.94 0.48 0.71 A 0.06 0.52 0.29 0000 --- --- --- --- 029175 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029176 00000 ------------ A 0.94 0.48 0.71 T 0.06 0.52 0.29 0000 --- --- --- --- 029346 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 029445 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029750 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 029914 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030014 00000 ------------ A 0.65 0.98 0.81 G 0.35 0.02 0.19 0000 --- --- --- --- 030077 00000 ------------ T 0.96 0.80 0.88 C 0.04 0.20 0.12 0000 --- --- --- --- 030308 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030309 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 030347 00000 ------------ T 0.96 0.80 0.88 C 0.04 0.20 0.12 0000 --- --- --- --- 030429 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 030459 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030924 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031071 00000 ------------ G 0.83 0.74 0.79 C 0.17 0.26 0.21 0000 --- --- --- --- 031468 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 031476 00000 ------------ C 0.94 0.48 0.71 T 0.06 0.52 0.29 0000 --- --- --- --- 032339 00783 3' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 032531 00975 3' UTR C 0.93 0.48 0.70 T 0.07 0.52 0.30 0000 --- --- --- --- 032828 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032873 00000 ------------ A 0.83 0.74 0.78 G 0.17 0.26 0.22 0000 --- --- --- --- 033099 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 033200 00000 ------------ G 0.94 0.48 0.71 A 0.06 0.52 0.29 0000 --- --- --- --- 033420 00000 ------------ C 0.83 0.74 0.78 A 0.17 0.26 0.22 0000 --- --- --- --- 033432 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 033764 00000 ------------ C 0.83 0.74 0.78 T 0.17 0.26 0.22 0000 --- --- --- --- 034524 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 034563 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 034998 00000 ------------ A 0.94 0.48 0.71 G 0.06 0.52 0.29 0000 --- --- --- --- 035013 00000 ------------ C 0.58 0.98 0.78 G 0.42 0.02 0.22 0000 --- --- --- --- 035016 00000 ------------ A 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 035126 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 035291 00000 ------------ G 0.83 0.80 0.82 A 0.17 0.20 0.18 0000 --- --- --- --- 035637 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 035716 00000 ------------ G 0.94 0.48 0.71 A 0.06 0.52 0.29 0000 --- --- --- --- 035734 00000 ------------ C 0.83 0.74 0.79 T 0.17 0.26 0.21 0000 --- --- --- --- 035736 00000 ------------ A 0.83 0.74 0.79 T 0.17 0.26 0.21 0000 --- --- --- --- 035763 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035770 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035848 00000 ------------ A 0.52 0.98 0.74 C 0.48 0.02 0.26 0000 --- --- --- --- 036087 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036283 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036330 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 036657 00000 ------------ C 0.96 0.57 0.77 T 0.04 0.43 0.23 0000 --- --- --- --- 036688 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 036816 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 036833 00000 ------------ C 0.93 0.50 0.72 G 0.07 0.50 0.28 0000 --- --- --- --- 037069 00000 ------------ T 0.52 0.53 0.52 C 0.48 0.47 0.48 0000 --- --- --- --- 037330 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 037334 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037391 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037767 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 037955 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 038233 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 038391 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 038697 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038750 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 038845 00000 ------------ G 0.85 0.73 0.79 A 0.15 0.27 0.21 0000 --- --- --- --- 039011 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039033 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 039076 00000 ------------ T 0.58 0.98 0.78 C 0.42 0.02 0.22 0000 --- --- --- --- 039105 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 039810 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 039972 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000595: CAT 007023: T 007400: A 007808: AA 008009: TCAA 011792: ATTA 011956: A 012461: AAATAT 013248: T 019190: T 025688: G 025937: TCTA 025942: TTC 027649: G 037955: GACT 039033: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000157 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001037 00000 ------------ A 0.79 0.91 0.84 G 0.21 0.09 0.16 0000 --- --- --- --- 001835 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002195 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 002628 00000 ------------ G 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 002657 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002667 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003748 00000 ------------ - 1.00 0.66 0.82 + 0.00 0.34 0.18 0000 --- --- --- --- 003786 00000 ------------ G 0.87 1.00 0.94 A 0.13 0.00 0.06 0000 --- --- --- --- 005903 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006015 00000 ------------ C 0.48 0.80 0.64 T 0.52 0.20 0.36 0000 --- --- --- --- 006291 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006324 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006599 00000 ------------ T 0.94 0.57 0.76 G 0.06 0.43 0.24 0000 --- --- --- --- 008654 00000 ------------ G 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 009074 00687 3' UTR A 0.76 0.69 0.73 G 0.24 0.31 0.27 0000 --- --- --- --- 009913 00000 ------------ G 0.78 1.00 0.89 A 0.22 0.00 0.11 0000 --- --- --- --- 010310 00000 ------------ C 0.39 0.80 0.60 G 0.61 0.20 0.40 0000 --- --- --- --- 010355 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010659 00000 ------------ A 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 011321 00000 ------------ G 0.50 0.88 0.69 C 0.50 0.12 0.31 0000 --- --- --- --- 011497 00000 ------------ C 0.43 0.86 0.64 T 0.57 0.14 0.36 0000 --- --- --- --- 011768 00000 ------------ A 0.41 0.80 0.61 G 0.59 0.20 0.39 0000 --- --- --- --- 011921 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 011986 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013299 00000 ------------ T 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 017430 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 017720 00000 ------------ G 0.61 0.75 0.68 A 0.39 0.25 0.32 0000 --- --- --- --- 017953 00000 ------------ G 0.93 0.84 0.89 A 0.07 0.16 0.11 0000 --- --- --- --- 018129 00000 ------------ G 0.87 0.82 0.84 C 0.13 0.18 0.16 0000 --- --- --- --- 018400 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018587 00000 ------------ A 0.77 0.48 0.63 C 0.23 0.52 0.37 0000 --- --- --- --- 018791 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019071 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 019101 00000 ------------ G 0.77 1.00 0.89 A 0.23 0.00 0.11 0000 --- --- --- --- 019464 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003748: GAATGAAT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000031 00000 ------------ T 0.63 0.75 0.69 G 0.37 0.25 0.31 0000 --- --- --- --- 000048 00000 ------------ C 0.96 0.97 0.97 T 0.04 0.03 0.03 0000 --- --- --- --- 000196 00000 ------------ A 0.91 0.61 0.76 G 0.09 0.39 0.24 0000 --- --- --- --- 000267 00000 ------------ T 0.91 0.78 0.85 G 0.09 0.22 0.15 0000 --- --- --- --- 000342 00000 ------------ A 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- 000351 00000 ------------ A 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 000680 00000 ------------ C 0.62 0.76 0.69 T 0.38 0.24 0.31 0000 --- --- --- --- 000999 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001163 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001472 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 001632 00000 ------------ G 0.71 0.35 0.53 A 0.29 0.65 0.47 0000 --- --- --- --- 001817 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001848 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002176 00000 ------------ T 0.63 0.79 0.70 A 0.37 0.21 0.30 0000 --- --- --- --- 002187 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 002235 00000 ------------ C 0.65 0.76 0.70 T 0.35 0.24 0.30 0000 --- --- --- --- 002300 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002580 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002689 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002745 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002749 00000 ------------ A 0.83 0.78 0.81 G 0.17 0.22 0.19 0000 --- --- --- --- 002759 00000 ------------ G 0.62 0.89 0.76 C 0.38 0.11 0.24 0000 --- --- --- --- 003162 00000 ------------ C 0.88 0.96 0.92 T 0.12 0.04 0.08 0000 --- --- --- --- 003345 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003563 00000 ------------ G 0.92 0.78 0.85 C 0.08 0.22 0.15 0000 --- --- --- --- 003977 00000 ------------ T 0.65 0.38 0.51 C 0.35 0.62 0.49 0000 --- --- --- --- 004442 00000 ------------ C 0.96 0.61 0.79 T 0.04 0.39 0.21 0000 --- --- --- --- 004447 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004893 00000 ------------ C 0.96 0.82 0.89 T 0.04 0.18 0.11 0000 --- --- --- --- 004909 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004948 00000 ------------ G 0.42 0.71 0.56 A 0.58 0.29 0.44 0000 --- --- --- --- 005162 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005882 00000 ------------ G 0.88 0.57 0.72 A 0.12 0.43 0.28 0000 --- --- --- --- 005940 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006038 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006049 00000 ------------ A 0.83 0.78 0.81 G 0.17 0.22 0.19 0000 --- --- --- --- 006058 00000 ------------ C 0.92 0.78 0.85 T 0.08 0.22 0.15 0000 --- --- --- --- 006147 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 006220 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006272 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006345 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 006529 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006588 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006596 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 006991 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007413 00000 ------------ G 0.71 0.91 0.81 A 0.29 0.09 0.19 0000 --- --- --- --- 007625 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007750 00000 ------------ T 0.92 0.80 0.86 C 0.08 0.20 0.14 0000 --- --- --- --- 007821 00000 ------------ G 0.86 0.93 0.89 C 0.14 0.07 0.11 0000 --- --- --- --- 008350 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008351 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 008776 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009118 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009123 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009259 00000 ------------ G 0.92 0.73 0.83 C 0.08 0.27 0.17 0000 --- --- --- --- 009282 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 009356 00000 ------------ C 0.52 0.54 0.53 T 0.48 0.46 0.47 0000 --- --- --- --- 009612 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009714 00000 ------------ G 0.79 0.70 0.75 A 0.21 0.30 0.25 0000 --- --- --- --- 009757 00000 ------------ A 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 010087 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 010287 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010404 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 010515 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 010614 00000 ------------ T 0.71 0.50 0.61 A 0.29 0.50 0.39 0000 --- --- --- --- 010668 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010839 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 010915 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011217 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011257 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011266 00000 ------------ T 0.67 0.72 0.69 G 0.33 0.28 0.31 0000 --- --- --- --- 011378 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011548 00000 ------------ T 0.96 0.83 0.89 G 0.04 0.17 0.11 0000 --- --- --- --- 011614 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 011755 00000 ------------ A 0.95 0.96 0.95 G 0.05 0.04 0.05 0000 --- --- --- --- 011781 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011937 00000 ------------ G 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 012061 00000 ------------ T 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 012524 00433 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0117 GAG GAA GLU(E) GLU(E) 012544 00453 NON-SYN C 0.95 0.89 0.92 G 0.05 0.11 0.08 0124 GCA GGA ALA(A) GLY(G) 012751 00000 ------------ T 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 012806 00000 ------------ G 0.83 0.87 0.85 T 0.17 0.13 0.15 0000 --- --- --- --- 012974 00000 ------------ C 0.80 0.67 0.74 T 0.20 0.33 0.26 0000 --- --- --- --- 013061 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 013119 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013190 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 013328 00000 ------------ T 0.79 0.67 0.73 A 0.21 0.33 0.27 0000 --- --- --- --- 013947 00000 ------------ G 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 013989 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014122 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014250 00000 ------------ G 0.56 0.72 0.64 T 0.44 0.28 0.36 0000 --- --- --- --- 014334 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014992 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015728 00000 ------------ A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 015755 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016037 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016053 00000 ------------ - 0.23 0.30 0.26 + 0.77 0.70 0.74 0000 --- --- --- --- 016150 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016266 00000 ------------ C 1.00 0.92 0.96 T 0.00 0.08 0.04 0000 --- --- --- --- 016694 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 016749 00000 ------------ A 0.79 0.73 0.76 C 0.21 0.27 0.24 0000 --- --- --- --- 016981 00000 ------------ A 0.88 0.89 0.88 G 0.12 0.11 0.12 0000 --- --- --- --- 017419 00000 ------------ G 0.91 0.97 0.94 A 0.09 0.03 0.06 0000 --- --- --- --- 017704 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017859 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017991 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018364 00000 ------------ C 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 019020 00000 ------------ G 0.71 0.73 0.72 T 0.29 0.27 0.28 0000 --- --- --- --- 019304 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 019655 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019669 00000 ------------ G 0.79 0.67 0.73 A 0.21 0.33 0.27 0000 --- --- --- --- 019734 00000 ------------ A 0.81 0.96 0.88 G 0.19 0.04 0.12 0000 --- --- --- --- 020278 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020593 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 020752 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020984 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021010 00000 ------------ A 0.96 0.96 0.96 G 0.04 0.04 0.04 0000 --- --- --- --- 021077 00000 ------------ G 0.93 0.97 0.95 C 0.07 0.03 0.05 0000 --- --- --- --- 021135 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021758 00000 ------------ A 0.93 0.91 0.92 C 0.07 0.09 0.08 0000 --- --- --- --- 021920 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 022164 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 022276 00000 ------------ G 0.79 0.86 0.83 A 0.21 0.14 0.17 0000 --- --- --- --- 022449 00000 ------------ - 0.26 0.50 0.39 + 0.74 0.50 0.61 0000 --- --- --- --- 023657 00000 ------------ A 0.71 0.70 0.71 G 0.29 0.30 0.29 0000 --- --- --- --- 023738 01414 SYNON A 0.98 1.00 0.99 T 0.02 0.00 0.01 0444 GTA GTT VAL(V) VAL(V) 023772 01448 SYNON A 0.94 0.91 0.92 C 0.06 0.09 0.08 0456 AGA CGA ARG(R) ARG(R) 024118 01794 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024143 01819 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024338 02014 3' UTR G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 024430 02106 3' UTR C 0.98 0.76 0.88 G 0.02 0.24 0.12 0000 --- --- --- --- 024804 02480 3' UTR T 0.95 0.90 0.93 G 0.05 0.10 0.07 0000 --- --- --- --- 025175 02851 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025179 02855 3' UTR G 0.94 0.72 0.83 A 0.06 0.28 0.17 0000 --- --- --- --- 025223 02899 3' UTR C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 025276 02952 3' UTR C 0.94 0.98 0.96 G 0.06 0.02 0.04 0000 --- --- --- --- 025438 03114 3' UTR C 0.96 0.91 0.94 T 0.04 0.09 0.06 0000 --- --- --- --- 025500 03176 3' UTR A 0.85 0.96 0.90 G 0.15 0.04 0.10 0000 --- --- --- --- 026760 04436 3' UTR G 0.86 0.90 0.88 T 0.14 0.10 0.12 0000 --- --- --- --- 027322 00000 ------------ G 0.81 0.86 0.84 T 0.19 0.14 0.16 0000 --- --- --- --- 027323 00000 ------------ A 0.81 0.86 0.84 T 0.19 0.14 0.16 0000 --- --- --- --- 027395 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 027421 00000 ------------ T 0.79 0.80 0.79 A 0.21 0.20 0.21 0000 --- --- --- --- 027680 00000 ------------ T 0.94 0.97 0.95 A 0.06 0.03 0.05 0000 --- --- --- --- 027777 00000 ------------ G 0.97 0.97 0.97 T 0.03 0.03 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006147: A 008351: TTAC 016053: G 021920: T 022164: T 022449: TC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000140 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000230 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000334 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000496 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000561 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000565 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000583 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 000684 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000740 00000 ------------ T 0.83 0.68 0.76 C 0.17 0.33 0.24 0000 --- --- --- --- 000750 00000 ------------ A 0.91 0.90 0.91 G 0.09 0.10 0.09 0000 --- --- --- --- 000914 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 000934 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001091 00000 ------------ A 0.59 0.55 0.57 G 0.41 0.45 0.43 0000 --- --- --- --- 001222 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001427 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001626 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001651 00000 ------------ C 0.74 0.86 0.80 T 0.26 0.14 0.20 0000 --- --- --- --- 001654 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 001812 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 002527 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002655 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002745 00000 ------------ T 0.74 0.87 0.81 A 0.26 0.13 0.19 0000 --- --- --- --- 003013 00253 SYNON C 0.87 0.98 0.92 A 0.13 0.02 0.08 0064 CGC CGA ARG(R) ARG(R) 003052 00292 SYNON G 0.87 1.00 0.93 A 0.13 0.00 0.07 0077 ACG ACA THR(T) THR(T) 003170 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003281 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003334 00000 ------------ A 0.71 0.87 0.79 G 0.29 0.13 0.21 0000 --- --- --- --- 003531 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003544 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003727 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003728 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003867 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 003987 00000 ------------ C 0.73 1.00 0.86 T 0.27 0.00 0.14 0000 --- --- --- --- 004228 00000 ------------ T 0.74 0.89 0.81 A 0.26 0.11 0.19 0000 --- --- --- --- 004254 00000 ------------ C 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 004288 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004317 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004385 00000 ------------ T 0.77 0.88 0.83 C 0.23 0.12 0.17 0000 --- --- --- --- 004425 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 004833 00000 ------------ G 0.74 0.86 0.80 A 0.26 0.14 0.20 0000 --- --- --- --- 005140 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005217 00000 ------------ C 0.75 0.87 0.81 T 0.25 0.13 0.19 0000 --- --- --- --- 005298 00000 ------------ G 0.88 0.70 0.79 T 0.12 0.30 0.21 0000 --- --- --- --- 005307 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005374 00000 ------------ T 0.75 0.87 0.81 C 0.25 0.13 0.19 0000 --- --- --- --- 005426 00000 ------------ G 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 005590 00000 ------------ T 0.75 0.86 0.80 C 0.25 0.14 0.20 0000 --- --- --- --- 005823 00000 ------------ T 0.75 0.87 0.81 G 0.25 0.13 0.19 0000 --- --- --- --- 005898 00000 ------------ G 0.75 0.87 0.81 A 0.25 0.13 0.19 0000 --- --- --- --- 006303 00000 ------------ A 0.74 0.88 0.81 G 0.26 0.12 0.19 0000 --- --- --- --- 006339 00000 ------------ G 0.78 0.88 0.83 A 0.22 0.12 0.17 0000 --- --- --- --- 006395 00000 ------------ G 0.89 0.60 0.75 A 0.11 0.40 0.25 0000 --- --- --- --- 006428 00000 ------------ C 0.78 0.88 0.83 T 0.22 0.12 0.17 0000 --- --- --- --- 006505 00000 ------------ G 0.77 0.70 0.73 A 0.23 0.30 0.27 0000 --- --- --- --- 006534 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006734 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 006805 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 007138 00000 ------------ G 0.76 0.87 0.82 A 0.24 0.13 0.18 0000 --- --- --- --- 007219 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007251 00000 ------------ A 0.78 0.85 0.81 G 0.22 0.15 0.19 0000 --- --- --- --- 007409 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007495 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007560 00000 ------------ T 0.73 0.89 0.80 C 0.27 0.11 0.20 0000 --- --- --- --- 007701 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007705 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 007968 00000 ------------ T 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 008053 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008058 00000 ------------ T 0.75 0.87 0.81 C 0.25 0.13 0.19 0000 --- --- --- --- 008066 00000 ------------ C 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 008179 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008345 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008368 00000 ------------ T 0.98 0.95 0.96 C 0.02 0.05 0.04 0000 --- --- --- --- 008460 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008517 00000 ------------ T 0.96 0.90 0.93 C 0.04 0.10 0.07 0000 --- --- --- --- 008538 00000 ------------ C 0.79 0.89 0.84 T 0.21 0.11 0.16 0000 --- --- --- --- 008631 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008738 00000 ------------ T 0.79 0.86 0.83 C 0.21 0.14 0.17 0000 --- --- --- --- 008758 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008790 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 008888 00000 ------------ T 0.77 0.87 0.82 C 0.23 0.13 0.18 0000 --- --- --- --- 008929 00000 ------------ A 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 009048 00000 ------------ G 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 009066 00000 ------------ G 0.79 0.86 0.83 A 0.21 0.14 0.17 0000 --- --- --- --- 009105 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009662 00000 ------------ A 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 009681 00000 ------------ C 0.69 1.00 0.85 G 0.31 0.00 0.15 0000 --- --- --- --- 009746 00000 ------------ A 0.83 0.92 0.87 G 0.17 0.08 0.13 0000 --- --- --- --- 009810 00000 ------------ G 0.85 0.92 0.88 A 0.15 0.08 0.12 0000 --- --- --- --- 010111 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010131 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010143 00000 ------------ T 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 010157 00000 ------------ G 0.90 0.59 0.74 A 0.10 0.41 0.26 0000 --- --- --- --- 010212 00000 ------------ A 0.79 0.87 0.83 G 0.21 0.13 0.17 0000 --- --- --- --- 010252 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 010358 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010385 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 010389 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010435 00000 ------------ T 0.79 0.86 0.83 C 0.21 0.14 0.17 0000 --- --- --- --- 010449 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 010450 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010580 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010675 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010679 00000 ------------ A 0.91 0.86 0.89 G 0.09 0.14 0.11 0000 --- --- --- --- 010876 00000 ------------ A 0.79 0.87 0.83 G 0.21 0.13 0.17 0000 --- --- --- --- 010962 00000 ------------ G 0.67 0.72 0.69 A 0.33 0.28 0.31 0000 --- --- --- --- 010964 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010974 00000 ------------ T 0.79 0.87 0.83 C 0.21 0.13 0.17 0000 --- --- --- --- 011004 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011096 00000 ------------ - 0.23 0.13 0.18 + 0.77 0.87 0.82 0000 --- --- --- --- 011110 00000 ------------ C 0.79 0.90 0.84 T 0.21 0.10 0.16 0000 --- --- --- --- 011197 00000 ------------ G 0.79 0.89 0.84 C 0.21 0.11 0.16 0000 --- --- --- --- 011318 00000 ------------ C 0.75 0.87 0.81 T 0.25 0.13 0.19 0000 --- --- --- --- 011477 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011516 00000 ------------ A 0.75 0.87 0.81 G 0.25 0.13 0.19 0000 --- --- --- --- 011518 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011548 00000 ------------ T 0.77 0.87 0.82 C 0.23 0.13 0.18 0000 --- --- --- --- 011549 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011855 00000 ------------ T 0.94 0.87 0.90 C 0.06 0.13 0.10 0000 --- --- --- --- 011882 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011919 00000 ------------ A 0.77 0.87 0.82 C 0.23 0.13 0.18 0000 --- --- --- --- 011932 00000 ------------ C 0.90 0.59 0.74 T 0.10 0.41 0.26 0000 --- --- --- --- 011933 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011938 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011971 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012018 00000 ------------ T 0.77 0.87 0.82 A 0.23 0.13 0.18 0000 --- --- --- --- 012045 00000 ------------ A 0.79 0.87 0.83 G 0.21 0.13 0.17 0000 --- --- --- --- 012135 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012444 00000 ------------ A 0.79 0.87 0.83 G 0.21 0.13 0.17 0000 --- --- --- --- 012624 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012660 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012770 00000 ------------ A 0.80 0.85 0.82 C 0.20 0.15 0.18 0000 --- --- --- --- 012802 00000 ------------ C 0.80 0.85 0.82 T 0.20 0.15 0.17 0000 --- --- --- --- 012891 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012899 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012901 00000 ------------ A 0.81 0.86 0.83 T 0.19 0.14 0.17 0000 --- --- --- --- 012998 00602 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0181 GAG AAG GLU(E) LYS(K) 013219 00000 ------------ C 0.81 0.86 0.83 T 0.19 0.14 0.17 0000 --- --- --- --- 013302 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013332 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013397 00000 ------------ A 0.83 0.87 0.85 T 0.17 0.13 0.15 0000 --- --- --- --- 013630 00000 ------------ A 0.80 0.87 0.84 G 0.20 0.13 0.16 0000 --- --- --- --- 013686 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 013735 00000 ------------ C 0.83 0.86 0.84 T 0.17 0.14 0.16 0000 --- --- --- --- 013809 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013839 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014005 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014075 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014482 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014605 00000 ------------ T 0.61 0.87 0.73 A 0.39 0.13 0.27 0000 --- --- --- --- 014791 00000 ------------ G 0.86 0.71 0.79 A 0.14 0.29 0.21 0000 --- --- --- --- 014929 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014942 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015285 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015286 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015328 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015486 00000 ------------ C 0.66 1.00 0.82 T 0.34 0.00 0.18 0000 --- --- --- --- 015504 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015516 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015719 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 015810 00000 ------------ C 0.61 0.82 0.71 T 0.39 0.18 0.29 0000 --- --- --- --- 016080 00000 ------------ A 0.54 0.85 0.70 G 0.46 0.15 0.30 0000 --- --- --- --- 016123 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016205 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016209 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 016421 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016823 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 016870 00000 ------------ C 0.52 0.83 0.67 G 0.48 0.17 0.33 0000 --- --- --- --- 017239 00000 ------------ C 0.62 0.85 0.73 T 0.38 0.15 0.27 0000 --- --- --- --- 017244 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 017271 00000 ------------ C 0.65 1.00 0.83 A 0.35 0.00 0.17 0000 --- --- --- --- 017298 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017306 00000 ------------ G 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 017336 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017360 00000 ------------ C 0.65 0.85 0.75 T 0.35 0.15 0.25 0000 --- --- --- --- 017368 00000 ------------ C 0.67 0.85 0.76 A 0.33 0.15 0.24 0000 --- --- --- --- 017413 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017524 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017742 00000 ------------ A 0.77 0.57 0.68 G 0.23 0.43 0.32 0000 --- --- --- --- 017782 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017857 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017988 00935 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0292 GAG AAG GLU(E) LYS(K) 018072 00000 ------------ A 0.82 0.85 0.83 G 0.18 0.15 0.17 0000 --- --- --- --- 018135 00000 ------------ T 0.96 0.88 0.92 A 0.04 0.12 0.08 0000 --- --- --- --- 018671 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018998 00000 ------------ G 0.85 0.85 0.85 A 0.15 0.15 0.15 0000 --- --- --- --- 018999 00000 ------------ T 0.85 0.85 0.85 C 0.15 0.15 0.15 0000 --- --- --- --- 019037 00000 ------------ C 0.88 0.59 0.73 T 0.12 0.41 0.27 0000 --- --- --- --- 019366 00000 ------------ G 0.87 0.85 0.86 A 0.13 0.15 0.14 0000 --- --- --- --- 019430 00000 ------------ - 0.98 0.88 0.93 + 0.02 0.12 0.07 0000 --- --- --- --- 019739 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019891 00000 ------------ A 0.88 0.62 0.76 G 0.12 0.38 0.24 0000 --- --- --- --- 020108 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020397 00000 ------------ C 0.67 0.89 0.78 T 0.33 0.11 0.22 0000 --- --- --- --- 020608 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021333 00000 ------------ T 0.83 0.59 0.72 C 0.17 0.41 0.28 0000 --- --- --- --- 021451 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021480 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 021762 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 022095 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022781 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022889 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023037 00000 ------------ G 0.88 0.86 0.87 A 0.12 0.14 0.13 0000 --- --- --- --- 023104 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011096: GTA 019430: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000170 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000806 00000 ------------ C 0.71 0.78 0.74 T 0.29 0.22 0.26 0000 --- --- --- --- 000884 00000 ------------ G 0.90 0.88 0.89 A 0.10 0.12 0.11 0000 --- --- --- --- 000951 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001263 00000 ------------ G 0.82 0.98 0.90 A 0.18 0.02 0.10 0000 --- --- --- --- 001773 00000 ------------ T 0.82 1.00 0.91 C 0.18 0.00 0.09 0000 --- --- --- --- 001995 00012 5' UTR T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 002586 00000 ------------ C 0.39 0.87 0.63 A 0.61 0.13 0.37 0000 --- --- --- --- 002592 00000 ------------ C 0.96 0.63 0.80 A 0.04 0.37 0.20 0000 --- --- --- --- 003027 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003094 00000 ------------ - 0.98 0.48 0.74 + 0.02 0.52 0.26 0000 --- --- --- --- 003385 00000 ------------ T 0.92 0.91 0.91 C 0.08 0.09 0.09 0000 --- --- --- --- 003519 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 003772 00000 ------------ T 0.73 0.89 0.83 G 0.27 0.11 0.17 0000 --- --- --- --- 004021 00000 ------------ - 0.17 0.02 0.09 + 0.82 0.98 0.91 0000 --- --- --- --- 004471 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004510 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004642 00000 ------------ - 0.04 0.00 0.03 + 0.96 1.00 0.97 0000 --- --- --- --- 004745 00000 ------------ C 0.73 0.91 0.82 A 0.27 0.09 0.18 0000 --- --- --- --- 005042 00000 ------------ G 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 005167 00000 ------------ A 0.65 0.55 0.59 G 0.35 0.45 0.41 0000 --- --- --- --- 005192 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 005195 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 005197 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 006126 00000 ------------ A 0.97 0.52 0.74 G 0.03 0.48 0.26 0000 --- --- --- --- 007237 00000 ------------ G 0.74 0.91 0.83 A 0.26 0.09 0.17 0000 --- --- --- --- 007611 00000 ------------ - 0.83 1.00 0.93 + 0.17 0.00 0.07 0000 --- --- --- --- 007793 00000 ------------ C 0.93 0.92 0.93 T 0.07 0.08 0.07 0000 --- --- --- --- 008418 00000 ------------ G 0.76 0.91 0.82 T 0.24 0.09 0.18 0000 --- --- --- --- 008726 00000 ------------ T 0.85 0.84 0.85 G 0.15 0.16 0.15 0000 --- --- --- --- 009296 00000 ------------ A 0.85 1.00 0.90 G 0.15 0.00 0.10 0000 --- --- --- --- 009457 00000 ------------ G 0.78 1.00 0.85 T 0.23 0.00 0.15 0000 --- --- --- --- 009508 00000 ------------ G 0.97 0.60 0.85 A 0.03 0.40 0.15 0000 --- --- --- --- 009577 00000 ------------ - 0.03 0.28 0.17 + 0.97 0.72 0.83 0000 --- --- --- --- 009958 00000 ------------ A 0.74 0.97 0.85 T 0.26 0.03 0.15 0000 --- --- --- --- 010274 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010366 00000 ------------ A 0.90 0.88 0.89 G 0.10 0.12 0.11 0000 --- --- --- --- 010795 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 011084 00000 ------------ T 0.75 0.91 0.84 C 0.25 0.09 0.16 0000 --- --- --- --- 011469 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011498 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011520 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011731 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011836 00000 ------------ G 0.96 0.54 0.75 A 0.04 0.46 0.25 0000 --- --- --- --- 011908 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012016 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012041 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012364 00000 ------------ C 0.95 0.54 0.74 G 0.05 0.46 0.26 0000 --- --- --- --- 012436 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012470 00000 ------------ A 0.89 0.89 0.89 C 0.11 0.11 0.11 0000 --- --- --- --- 012473 00000 ------------ T 0.95 0.54 0.74 C 0.05 0.46 0.26 0000 --- --- --- --- 012562 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012674 00000 ------------ G 0.95 0.96 0.95 T 0.05 0.04 0.05 0000 --- --- --- --- 012791 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012933 00000 ------------ G 0.95 0.55 0.75 A 0.05 0.45 0.25 0000 --- --- --- --- 013256 00000 ------------ A 0.96 0.54 0.75 T 0.04 0.46 0.25 0000 --- --- --- --- 013500 00000 ------------ T 0.96 0.54 0.75 C 0.04 0.46 0.25 0000 --- --- --- --- 014107 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 014285 00000 ------------ T 0.98 0.54 0.77 A 0.02 0.46 0.23 0000 --- --- --- --- 014331 00000 ------------ T 0.79 0.54 0.67 C 0.21 0.46 0.33 0000 --- --- --- --- 014352 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014580 00000 ------------ C 0.80 0.52 0.67 T 0.20 0.48 0.33 0000 --- --- --- --- 014660 00000 ------------ T 0.80 0.52 0.66 C 0.20 0.48 0.34 0000 --- --- --- --- 014690 00000 ------------ G 0.80 0.52 0.66 T 0.20 0.48 0.34 0000 --- --- --- --- 014698 00000 ------------ C 0.80 0.52 0.66 A 0.20 0.48 0.34 0000 --- --- --- --- 014812 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014835 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 015221 00000 ------------ - 0.21 0.46 0.33 + 0.79 0.54 0.67 0000 --- --- --- --- 015253 00000 ------------ T 0.73 0.72 0.72 C 0.27 0.28 0.28 0000 --- --- --- --- 015301 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015712 00000 ------------ G 0.94 0.79 0.87 T 0.06 0.21 0.13 0000 --- --- --- --- 016004 00000 ------------ A 0.78 0.54 0.65 C 0.23 0.46 0.35 0000 --- --- --- --- 016206 00000 ------------ C 0.72 0.91 0.83 T 0.28 0.09 0.17 0000 --- --- --- --- 016233 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 016391 00000 ------------ A 0.78 0.54 0.65 G 0.23 0.46 0.35 0000 --- --- --- --- 016420 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 016512 00000 ------------ A 0.78 0.54 0.65 T 0.23 0.46 0.35 0000 --- --- --- --- 016901 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 017007 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017104 00000 ------------ C 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 017295 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017419 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017568 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 017607 00000 ------------ G 0.74 0.73 0.73 T 0.26 0.27 0.27 0000 --- --- --- --- 017742 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017821 00000 ------------ T 0.89 0.89 0.89 G 0.11 0.11 0.11 0000 --- --- --- --- 018135 00000 ------------ C 0.94 0.95 0.95 T 0.06 0.05 0.05 0000 --- --- --- --- 021979 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022044 00000 ------------ C 0.82 0.54 0.68 A 0.18 0.46 0.32 0000 --- --- --- --- 022056 00000 ------------ A 0.82 0.54 0.68 C 0.18 0.46 0.32 0000 --- --- --- --- 022089 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022352 00000 ------------ A 0.79 0.54 0.67 G 0.21 0.46 0.33 0000 --- --- --- --- 022455 00000 ------------ A 0.79 0.54 0.67 G 0.21 0.46 0.33 0000 --- --- --- --- 022626 00000 ------------ G 0.79 0.55 0.67 A 0.21 0.45 0.33 0000 --- --- --- --- 022647 00000 ------------ G 0.79 0.55 0.68 A 0.21 0.45 0.32 0000 --- --- --- --- 022693 00000 ------------ T 0.79 0.55 0.68 G 0.21 0.45 0.32 0000 --- --- --- --- 022707 00000 ------------ G 0.79 0.57 0.69 A 0.21 0.43 0.31 0000 --- --- --- --- 022759 00000 ------------ G 0.93 0.62 0.79 A 0.07 0.38 0.21 0000 --- --- --- --- 023642 00000 ------------ T 0.80 0.54 0.67 C 0.20 0.46 0.33 0000 --- --- --- --- 023665 00000 ------------ T 0.79 0.54 0.67 C 0.21 0.46 0.33 0000 --- --- --- --- 023715 00000 ------------ C 0.90 0.98 0.94 T 0.10 0.02 0.06 0000 --- --- --- --- 023747 00000 ------------ A 0.79 0.54 0.67 C 0.21 0.46 0.33 0000 --- --- --- --- 023755 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 024037 00000 ------------ T 0.56 0.76 0.66 C 0.44 0.24 0.34 0000 --- --- --- --- 024579 00000 ------------ T 0.80 0.54 0.67 G 0.20 0.46 0.33 0000 --- --- --- --- 024697 00000 ------------ C 0.80 0.54 0.67 T 0.20 0.46 0.33 0000 --- --- --- --- 024908 00000 ------------ T 0.97 1.00 0.98 C 0.03 0.00 0.02 0000 --- --- --- --- 026004 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 026054 00000 ------------ G 0.79 0.57 0.67 T 0.21 0.43 0.33 0000 --- --- --- --- 026297 00000 ------------ C 1.00 0.95 0.97 T 0.00 0.05 0.03 0000 --- --- --- --- 027326 00000 ------------ G 0.77 0.57 0.68 C 0.23 0.42 0.32 0000 --- --- --- --- 027375 00000 ------------ G 0.74 0.71 0.73 A 0.26 0.29 0.27 0000 --- --- --- --- 027571 00000 ------------ C 0.69 0.53 0.60 A 0.31 0.47 0.40 0000 --- --- --- --- 027959 00000 ------------ C 0.77 0.55 0.64 T 0.23 0.45 0.36 0000 --- --- --- --- 028365 00000 ------------ C 0.97 0.58 0.82 T 0.03 0.42 0.18 0000 --- --- --- --- 028380 00000 ------------ T 0.97 0.94 0.96 C 0.03 0.06 0.04 0000 --- --- --- --- 028703 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 029036 00000 ------------ T 0.86 0.85 0.86 A 0.14 0.15 0.14 0000 --- --- --- --- 029139 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 030269 00000 ------------ C 0.83 0.71 0.75 T 0.17 0.29 0.25 0000 --- --- --- --- 030636 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030842 00000 ------------ C 0.97 0.97 0.97 T 0.03 0.03 0.03 0000 --- --- --- --- 031604 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031623 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 032114 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 032600 00000 ------------ G 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 032614 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 032782 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 032939 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033388 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 033468 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 033526 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 033758 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 033801 00000 ------------ T 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 033844 00000 ------------ G 0.90 0.98 0.94 C 0.10 0.02 0.06 0000 --- --- --- --- 034032 00912 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0262 TGC TGT CYS(C) CYS(C) 034264 00000 ------------ T 0.73 0.91 0.82 C 0.27 0.09 0.18 0000 --- --- --- --- 034369 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 034467 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 034485 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 034548 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035143 00000 ------------ A 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 035223 00000 ------------ A 0.73 0.91 0.82 T 0.27 0.09 0.18 0000 --- --- --- --- 035327 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 035491 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 035510 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 035758 00000 ------------ - 0.20 0.45 0.33 + 0.80 0.55 0.67 0000 --- --- --- --- 035767 00000 ------------ G 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 035937 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 035972 00000 ------------ A 0.74 0.72 0.73 G 0.26 0.28 0.27 0000 --- --- --- --- 036084 00000 ------------ A 0.80 0.54 0.67 C 0.20 0.46 0.33 0000 --- --- --- --- 036156 00000 ------------ C 0.96 0.95 0.96 T 0.04 0.05 0.04 0000 --- --- --- --- 036249 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 036468 00000 ------------ T 0.73 0.91 0.82 C 0.27 0.09 0.18 0000 --- --- --- --- 036752 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 036842 00000 ------------ G 0.79 0.54 0.67 A 0.21 0.46 0.33 0000 --- --- --- --- 037749 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 037757 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 037777 00000 ------------ T 0.98 0.54 0.77 C 0.02 0.46 0.23 0000 --- --- --- --- 037940 00000 ------------ T 0.96 0.54 0.76 C 0.04 0.46 0.24 0000 --- --- --- --- 037985 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 038014 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 038015 00000 ------------ G 0.73 0.91 0.82 A 0.27 0.09 0.18 0000 --- --- --- --- 038036 00000 ------------ C 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 038258 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038313 00000 ------------ T 0.79 0.54 0.67 C 0.21 0.46 0.33 0000 --- --- --- --- 038363 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 038397 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 038414 00000 ------------ G 0.73 0.91 0.82 A 0.27 0.09 0.18 0000 --- --- --- --- 038510 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038613 00000 ------------ C 0.79 0.54 0.67 T 0.21 0.46 0.33 0000 --- --- --- --- 038665 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 038877 00000 ------------ T 0.94 0.89 0.91 G 0.06 0.11 0.09 0000 --- --- --- --- 038906 00000 ------------ T 0.73 0.91 0.82 C 0.27 0.09 0.18 0000 --- --- --- --- 038916 00000 ------------ G 0.48 0.54 0.51 A 0.52 0.46 0.49 0000 --- --- --- --- 038969 00000 ------------ G 0.73 0.91 0.82 A 0.27 0.09 0.18 0000 --- --- --- --- 039065 00000 ------------ C 0.48 0.54 0.51 T 0.52 0.46 0.49 0000 --- --- --- --- 039225 00000 ------------ C 0.87 0.85 0.86 T 0.13 0.15 0.14 0000 --- --- --- --- 039402 00000 ------------ G 0.48 0.52 0.50 T 0.52 0.48 0.50 0000 --- --- --- --- 039478 00000 ------------ G 0.79 0.57 0.69 A 0.21 0.43 0.31 0000 --- --- --- --- 039504 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039537 00000 ------------ C 0.48 0.52 0.50 T 0.52 0.48 0.50 0000 --- --- --- --- 039552 00000 ------------ G 0.48 0.52 0.50 A 0.52 0.48 0.50 0000 --- --- --- --- 039600 00000 ------------ C 0.73 0.91 0.82 G 0.27 0.09 0.18 0000 --- --- --- --- 039648 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 039703 00000 ------------ G 0.52 0.48 0.50 C 0.48 0.52 0.50 0000 --- --- --- --- 039804 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 039891 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 039905 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040125 00000 ------------ T 0.48 0.55 0.51 C 0.52 0.45 0.49 0000 --- --- --- --- 040204 00000 ------------ C 0.48 0.55 0.51 T 0.52 0.45 0.49 0000 --- --- --- --- 040273 00000 ------------ G 0.48 0.55 0.51 A 0.52 0.45 0.49 0000 --- --- --- --- 040421 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 040470 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 040487 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 040505 00000 ------------ A 0.89 0.98 0.93 G 0.11 0.02 0.07 0000 --- --- --- --- 040507 00000 ------------ C 0.48 0.55 0.51 A 0.52 0.45 0.49 0000 --- --- --- --- 040621 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 040650 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040682 00000 ------------ T 0.74 0.69 0.72 G 0.26 0.31 0.28 0000 --- --- --- --- 040809 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040978 01180 NON-SYN G 0.83 1.00 0.91 A 0.17 0.00 0.09 0352 GTT ATT VAL(V) ILE(I) 041025 01227 SYNON T 0.73 0.93 0.83 C 0.27 0.07 0.17 0367 TAT TAC TYR(Y) TYR(Y) 041120 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 041152 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 041191 00000 ------------ T 0.73 0.93 0.83 A 0.27 0.07 0.17 0000 --- --- --- --- 041223 00000 ------------ A 0.73 0.93 0.83 G 0.27 0.07 0.17 0000 --- --- --- --- 041510 00000 ------------ G 0.73 0.93 0.83 A 0.27 0.07 0.17 0000 --- --- --- --- 041526 00000 ------------ C 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 041742 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041803 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 041843 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 041907 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 042123 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 042209 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042239 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042242 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042324 00000 ------------ - 0.83 0.93 0.88 + 0.17 0.07 0.12 0000 --- --- --- --- 042397 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 042405 00000 ------------ G 0.73 0.91 0.82 C 0.27 0.09 0.18 0000 --- --- --- --- 042584 00000 ------------ T 0.48 0.74 0.61 C 0.52 0.26 0.39 0000 --- --- --- --- 042813 00000 ------------ G 0.98 0.72 0.85 A 0.02 0.28 0.15 0000 --- --- --- --- 042957 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 042994 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 043076 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 043188 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 043208 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 043218 00000 ------------ C 0.81 1.00 0.91 G 0.19 0.00 0.09 0000 --- --- --- --- 044455 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 044514 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044617 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 044749 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 045273 00000 ------------ A 0.73 0.90 0.81 G 0.27 0.10 0.19 0000 --- --- --- --- 045294 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 045299* 045379 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045443 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 045474 00000 ------------ A 0.94 0.95 0.94 G 0.06 0.05 0.06 0000 --- --- --- --- 047258 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 047634 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 047648 00000 ------------ T 0.52 0.85 0.68 C 0.48 0.15 0.32 0000 --- --- --- --- 047680 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 047861 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 047915 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 048647 00000 ------------ C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 048692 00000 ------------ C 0.78 0.95 0.86 T 0.23 0.05 0.14 0000 --- --- --- --- 048829 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 048884 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 049006 00000 ------------ G 0.52 0.86 0.69 A 0.48 0.14 0.31 0000 --- --- --- --- 049050 00000 ------------ C 0.93 0.98 0.96 T 0.07 0.02 0.04 0000 --- --- --- --- 049852 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 050063 01563 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0479 GAC GAT ASP(D) ASP(D) 050275 01775 NON-SYN T 0.52 0.85 0.68 C 0.48 0.15 0.32 0550 CTG CCG LEU(L) PRO(P) 050404 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 050428 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 050993 00000 ------------ T 0.64 0.93 0.77 A 0.36 0.07 0.23 0000 --- --- --- --- 051178 00000 ------------ A 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 051332 00000 ------------ C 0.95 0.53 0.78 T 0.05 0.47 0.22 0000 --- --- --- --- 051369 00000 ------------ C 0.42 0.58 0.50 T 0.57 0.42 0.50 0000 --- --- --- --- 051383 00000 ------------ G 0.95 0.97 0.96 A 0.05 0.03 0.04 0000 --- --- --- --- 051433 00000 ------------ G 0.67 0.94 0.79 T 0.33 0.06 0.21 0000 --- --- --- --- 051455 00000 ------------ C 0.98 0.97 0.97 A 0.02 0.03 0.03 0000 --- --- --- --- 051547 00000 ------------ C 0.97 0.55 0.76 T 0.03 0.45 0.24 0000 --- --- --- --- 051606 00000 ------------ G 0.97 0.95 0.96 A 0.03 0.05 0.04 0000 --- --- --- --- 051732 00000 ------------ T 1.00 0.89 0.94 G 0.00 0.11 0.06 0000 --- --- --- --- 051775 00000 ------------ C 0.96 0.97 0.97 T 0.04 0.03 0.03 0000 --- --- --- --- 052121 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 052122 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 052144 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 052349 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 052350 00000 ------------ G 0.68 0.93 0.80 A 0.33 0.07 0.20 0000 --- --- --- --- 052405 00000 ------------ G 0.72 0.93 0.83 A 0.28 0.07 0.17 0000 --- --- --- --- 052525 00000 ------------ C 0.72 0.94 0.83 T 0.28 0.06 0.17 0000 --- --- --- --- 052621 00000 ------------ C 0.66 0.94 0.80 T 0.34 0.06 0.20 0000 --- --- --- --- 052622 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 052914 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 053235 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 053332 00000 ------------ A 0.89 0.95 0.92 G 0.11 0.05 0.08 0000 --- --- --- --- 053449 00000 ------------ C 0.97 0.52 0.74 T 0.03 0.48 0.26 0000 --- --- --- --- 053632 00000 ------------ A 0.81 0.45 0.64 G 0.19 0.55 0.36 0000 --- --- --- --- 053808 00000 ------------ G 0.59 0.90 0.74 A 0.41 0.10 0.26 0000 --- --- --- --- 053997 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 054132 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 054247 01833 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0569 AAG AAA LYS(K) LYS(K) 054398 00000 ------------ G 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 056139 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003094: CCA 004021: A 004642: T 007611: TATA 009577: C 015221: T 035758: AGAG 041803: AGAA 042123: TTTGA 042324: G 043188: CTC 052121: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 045299 A 0.02 0.00 0.01 C 0.96 1.00 0.98 T 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000150 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 000422 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 000560 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000606 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000627 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000673 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 000728 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001018 00000 ------------ T 0.90 0.61 0.76 C 0.10 0.39 0.24 0000 --- --- --- --- 001063 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 001193 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001244 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001245 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001246 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 001343 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001519 00000 ------------ G 0.95 0.83 0.89 C 0.05 0.17 0.11 0000 --- --- --- --- 001768 00000 ------------ A 0.95 0.83 0.89 C 0.05 0.17 0.11 0000 --- --- --- --- 001979 00000 ------------ G 0.95 0.83 0.89 A 0.05 0.17 0.11 0000 --- --- --- --- 002060 00000 ------------ G 0.96 0.83 0.89 A 0.04 0.17 0.11 0000 --- --- --- --- 002116 00000 ------------ A 0.96 0.83 0.89 G 0.04 0.17 0.11 0000 --- --- --- --- 002135 00019 5' UTR G 0.96 0.83 0.89 C 0.04 0.17 0.11 0000 --- --- --- --- 002182 00000 ------------ T 0.96 0.83 0.89 C 0.04 0.17 0.11 0000 --- --- --- --- 002304 00000 ------------ C 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 002324 00000 ------------ A 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 002443 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002491 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 002587 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002618 00000 ------------ A 0.97 0.83 0.89 T 0.03 0.17 0.11 0000 --- --- --- --- 002620 00000 ------------ - 0.19 0.00 0.09 + 0.81 1.00 0.91 0000 --- --- --- --- 002630 00000 ------------ C 0.97 0.83 0.89 G 0.03 0.17 0.11 0000 --- --- --- --- 002712 00000 ------------ A 0.97 0.83 0.89 G 0.03 0.17 0.11 0000 --- --- --- --- 002732 00000 ------------ C 0.97 0.83 0.89 A 0.03 0.17 0.11 0000 --- --- --- --- 002765 00000 ------------ G 0.47 0.74 0.62 T 0.53 0.26 0.38 0000 --- --- --- --- 002977 00000 ------------ C 0.97 0.83 0.89 T 0.03 0.17 0.11 0000 --- --- --- --- 003040 00000 ------------ T 0.97 0.83 0.89 C 0.03 0.17 0.11 0000 --- --- --- --- 003050 00000 ------------ T 0.97 0.83 0.89 C 0.03 0.17 0.11 0000 --- --- --- --- 003091 00000 ------------ G 0.97 0.83 0.89 A 0.03 0.17 0.11 0000 --- --- --- --- 003254 00000 ------------ G 0.96 0.83 0.89 A 0.04 0.17 0.11 0000 --- --- --- --- 003277 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003331 00000 ------------ A 0.42 0.75 0.58 G 0.58 0.25 0.42 0000 --- --- --- --- 003374 00000 ------------ G 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 003571 00000 ------------ A 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 003575 00000 ------------ A 0.41 0.75 0.58 G 0.59 0.25 0.42 0000 --- --- --- --- 003778 00000 ------------ A 0.98 0.82 0.90 G 0.02 0.18 0.10 0000 --- --- --- --- 003965 00000 ------------ G 0.98 0.83 0.90 T 0.02 0.17 0.10 0000 --- --- --- --- 004047 00000 ------------ T 0.58 0.91 0.74 G 0.42 0.09 0.26 0000 --- --- --- --- 004090 00000 ------------ G 0.98 0.83 0.90 C 0.02 0.17 0.10 0000 --- --- --- --- 004097 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004265 00000 ------------ A 0.98 0.83 0.90 C 0.02 0.17 0.10 0000 --- --- --- --- 004470 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 004511 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 005848 00000 ------------ G 0.72 0.91 0.82 A 0.28 0.09 0.18 0000 --- --- --- --- 006284 00000 ------------ G 0.98 0.80 0.89 A 0.02 0.20 0.11 0000 --- --- --- --- 006568 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006600 00000 ------------ T 0.71 0.91 0.80 G 0.29 0.09 0.20 0000 --- --- --- --- 006620 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006843 00000 ------------ G 0.82 0.80 0.81 C 0.18 0.20 0.19 0000 --- --- --- --- 007044 00000 ------------ G 0.71 0.91 0.81 A 0.29 0.09 0.19 0000 --- --- --- --- 007194 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007498 00000 ------------ C 0.83 0.80 0.82 T 0.17 0.20 0.18 0000 --- --- --- --- 007601 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007650 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007906 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007916 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 008513 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 008575 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008576 00000 ------------ - 0.48 0.28 0.38 + 0.52 0.72 0.62 0000 --- --- --- --- 008953 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010234 00000 ------------ A 0.71 0.91 0.81 G 0.29 0.09 0.19 0000 --- --- --- --- 010257 00000 ------------ T 0.90 0.72 0.81 C 0.10 0.28 0.19 0000 --- --- --- --- 010746 00000 ------------ T 0.96 0.80 0.88 C 0.04 0.20 0.12 0000 --- --- --- --- 010753 00000 ------------ G 0.71 0.91 0.81 C 0.29 0.09 0.19 0000 --- --- --- --- 010952 00000 ------------ G 0.67 0.72 0.69 A 0.33 0.28 0.31 0000 --- --- --- --- 011224 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011341 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011645 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011681 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011873 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012136 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012142 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012233 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012319 00000 ------------ G 1.00 0.85 0.93 A 0.00 0.15 0.07 0000 --- --- --- --- 012377 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 012437 00000 ------------ - 0.96 0.80 0.88 + 0.04 0.20 0.12 0000 --- --- --- --- 012508 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012602 00000 ------------ G 0.79 0.91 0.85 A 0.21 0.09 0.15 0000 --- --- --- --- 012695 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012903 00000 ------------ A 0.52 0.72 0.62 G 0.48 0.28 0.38 0000 --- --- --- --- 012937 00000 ------------ G 0.83 0.80 0.82 A 0.17 0.20 0.18 0000 --- --- --- --- 013027 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013056 00000 ------------ G 0.96 0.80 0.88 A 0.04 0.20 0.12 0000 --- --- --- --- 013328 00000 ------------ T 0.67 0.72 0.69 C 0.33 0.28 0.31 0000 --- --- --- --- 013760 00147 SYNON T 0.96 0.80 0.88 C 0.04 0.20 0.12 0039 GCT GCC ALA(A) ALA(A) 013815 00000 ------------ C 0.96 0.82 0.89 T 0.04 0.18 0.11 0000 --- --- --- --- 013819 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013826 00000 ------------ G 0.96 0.82 0.89 A 0.04 0.18 0.11 0000 --- --- --- --- 013847 00000 ------------ G 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- 013888 00000 ------------ T 0.96 0.71 0.84 G 0.04 0.29 0.16 0000 --- --- --- --- 013891 00000 ------------ A 0.96 0.82 0.89 C 0.04 0.18 0.11 0000 --- --- --- --- 013902 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013926 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013929 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 013952 00000 ------------ G 0.96 0.82 0.89 A 0.04 0.18 0.11 0000 --- --- --- --- 014011 00000 ------------ G 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 014036 00000 ------------ C 0.70 0.91 0.80 T 0.30 0.09 0.20 0000 --- --- --- --- 014063 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014225 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 014245 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014356 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 014687 00000 ------------ C 0.95 0.82 0.88 A 0.05 0.18 0.12 0000 --- --- --- --- 015018 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 015023 00000 ------------ C 0.96 0.82 0.89 G 0.04 0.18 0.11 0000 --- --- --- --- 015110 00000 ------------ G 0.95 0.76 0.86 A 0.05 0.24 0.14 0000 --- --- --- --- 015132 00000 ------------ T 0.84 0.82 0.83 C 0.16 0.18 0.17 0000 --- --- --- --- 015306 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 015346 00000 ------------ A 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 015453 00000 ------------ T 0.77 0.35 0.56 A 0.23 0.65 0.44 0000 --- --- --- --- 015555 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015559 00000 ------------ T 0.93 0.80 0.87 G 0.07 0.20 0.13 0000 --- --- --- --- 015614 00000 ------------ G 0.48 0.72 0.60 A 0.52 0.28 0.40 0000 --- --- --- --- 015653 00000 ------------ C 0.52 0.91 0.71 T 0.48 0.09 0.29 0000 --- --- --- --- 015672 00000 ------------ C 0.52 0.91 0.71 T 0.48 0.09 0.29 0000 --- --- --- --- 015687 00000 ------------ G 0.52 0.91 0.71 A 0.48 0.09 0.29 0000 --- --- --- --- 015983 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 016022 00000 ------------ C 0.92 0.76 0.84 A 0.08 0.24 0.16 0000 --- --- --- --- 016094 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016184 00000 ------------ G 0.89 0.76 0.82 A 0.11 0.24 0.18 0000 --- --- --- --- 016341 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 016364 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016556 00000 ------------ C 0.50 0.72 0.61 T 0.50 0.28 0.39 0000 --- --- --- --- 016608 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016714 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 016857 00366 SYNON T 0.46 0.72 0.59 C 0.54 0.28 0.41 0112 AGT AGC SER(S) SER(S) 016926 00435 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0135 GAC GAT ASP(D) ASP(D) 016932 00441 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0137 CCC CCT PRO(P) PRO(P) 017001 00510 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0160 TAG TAA *** *** 017068 00577 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017076 00585 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017139 00648 3' UTR C 0.48 0.72 0.60 G 0.52 0.28 0.40 0000 --- --- --- --- 017163 00672 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 017311 00820 3' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 017312 00821 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017692 01201 3' UTR - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 017965 01474 3' UTR G 0.83 0.74 0.78 A 0.17 0.26 0.22 0000 --- --- --- --- 018184 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018240 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 018328 00000 ------------ T 0.85 0.74 0.79 C 0.15 0.26 0.21 0000 --- --- --- --- 018358 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 018383 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018395 00000 ------------ A 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 018423 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018694 00000 ------------ T 0.83 0.74 0.79 C 0.17 0.26 0.21 0000 --- --- --- --- 019077 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 019116 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019327 00000 ------------ G 0.75 0.54 0.65 A 0.25 0.46 0.35 0000 --- --- --- --- 019517 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001246: C 002620: G 004470: TATG 004511: T 008576: C 012437: AG 017692: T 018240: GCGCC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000248 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000404 00000 ------------ A 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 000429 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 000495 00000 ------------ T 0.96 0.73 0.84 G 0.04 0.27 0.16 0000 --- --- --- --- 000993 00161 SYNON G 0.77 0.57 0.67 T 0.23 0.43 0.33 0038 CTG CTT LEU(L) LEU(L) 001094 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001240 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001509 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001898 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002038 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 002340 00000 ------------ C 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 002762 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003930 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 004151 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004578 00000 ------------ C 1.00 0.95 0.97 T 0.00 0.05 0.03 0000 --- --- --- --- 004728 00000 ------------ + 0.31 0.00 0.16 - 0.69 1.00 0.84 0000 --- --- --- --- 005184 00000 ------------ C 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 005343 00000 ------------ A 0.92 0.55 0.74 G 0.08 0.45 0.26 0000 --- --- --- --- 005443 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006161 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006230 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006452 00000 ------------ + 1.00 0.98 0.99 - 0.00 0.02 0.01 0000 --- --- --- --- 006500 00000 ------------ T 0.90 0.79 0.84 C 0.10 0.21 0.16 0000 --- --- --- --- 006691 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000429: T 004728: A 006452: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000173 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000266 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000267 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 000596 00000 ------------ C 0.89 0.80 0.85 G 0.11 0.20 0.15 0000 --- --- --- --- 000822 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 001037 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001266 00000 ------------ T 0.47 0.61 0.55 G 0.53 0.39 0.45 0000 --- --- --- --- 001635 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 001807 00000 ------------ C 0.76 0.94 0.84 T 0.24 0.06 0.16 0000 --- --- --- --- 002262 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002482 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003343 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003374 00000 ------------ A 0.88 0.91 0.90 G 0.12 0.09 0.10 0000 --- --- --- --- 003699 00000 ------------ A 0.71 0.68 0.69 G 0.29 0.33 0.31 0000 --- --- --- --- 003736 00000 ------------ A 0.96 0.91 0.94 G 0.04 0.09 0.06 0000 --- --- --- --- 003781 00000 ------------ A 0.71 0.72 0.71 G 0.29 0.28 0.29 0000 --- --- --- --- 003956 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004060 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004078 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004925 00000 ------------ C 0.62 0.98 0.80 T 0.38 0.02 0.20 0000 --- --- --- --- 005063 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 005155 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 005399 00000 ------------ C 0.95 0.97 0.96 T 0.05 0.03 0.04 0000 --- --- --- --- 005685 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005806 00000 ------------ T 0.85 0.95 0.90 C 0.15 0.05 0.10 0000 --- --- --- --- 005869 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 005930 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006020 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006296 00000 ------------ C 0.55 0.52 0.53 T 0.45 0.48 0.47 0000 --- --- --- --- 006338 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000560 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 000783 00000 ------------ - 0.39 0.26 0.33 + 0.61 0.74 0.67 0000 --- --- --- --- 000974 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001032 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 002185 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002662 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002689 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002821 00000 ------------ T 0.63 0.52 0.58 C 0.37 0.48 0.42 0000 --- --- --- --- 002879 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 002914 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003404 00000 ------------ C 0.83 0.75 0.80 T 0.17 0.25 0.20 0000 --- --- --- --- 003409 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 003421 00000 ------------ G 0.94 0.70 0.83 T 0.06 0.30 0.17 0000 --- --- --- --- 003428 00000 ------------ G 0.92 1.00 0.95 A 0.08 0.00 0.05 0000 --- --- --- --- 003859 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004124 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004294 00000 ------------ C 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 004308 00000 ------------ C 0.92 0.83 0.87 T 0.08 0.17 0.13 0000 --- --- --- --- 004718 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005083 00000 ------------ T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 005250 00000 ------------ A 0.89 0.57 0.73 G 0.11 0.43 0.27 0000 --- --- --- --- 005352 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005954 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006032 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006033 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 006223 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 006941 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 007060 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007199 00280 SYNON T 0.86 0.57 0.70 C 0.14 0.43 0.30 0078 TGT TGC CYS(C) CYS(C) 007537 00000 ------------ C 0.66 1.00 0.85 T 0.34 0.00 0.15 0000 --- --- --- --- 007695 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007757 00000 ------------ C 0.71 1.00 0.86 T 0.29 0.00 0.14 0000 --- --- --- --- 008427 00000 ------------ C 0.73 1.00 0.86 T 0.27 0.00 0.14 0000 --- --- --- --- 008869 00000 ------------ C 0.72 1.00 0.87 T 0.28 0.00 0.13 0000 --- --- --- --- 009467 00000 ------------ T 0.69 0.71 0.70 C 0.31 0.29 0.30 0000 --- --- --- --- 010330 00566 3' UTR C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 010344 00580 3' UTR G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 010442 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011022 00000 ------------ T 1.00 0.83 0.91 C 0.00 0.17 0.09 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000783: GAATGAAT 000974: C 001032: AAATAAGT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000331 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000443 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000811 00000 ------------ A 0.94 0.72 0.83 G 0.06 0.28 0.17 0000 --- --- --- --- 000975 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001260 00000 ------------ - 0.09 0.07 0.08 + 0.91 0.93 0.92 0000 --- --- --- --- 001506 00036 5' UTR C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001702 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002276 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 002323 00000 ------------ T 0.65 0.57 0.61 C 0.35 0.43 0.39 0000 --- --- --- --- 002324 00000 ------------ G 0.65 0.57 0.61 C 0.35 0.43 0.39 0000 --- --- --- --- 002361 00000 ------------ - 0.65 0.54 0.60 + 0.35 0.46 0.40 0000 --- --- --- --- 002538 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003095 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 003096 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003367 00000 ------------ G 0.80 0.67 0.73 A 0.20 0.33 0.27 0000 --- --- --- --- 003400 00000 ------------ - 0.82 0.65 0.73 + 0.17 0.35 0.27 0000 --- --- --- --- 003505 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003535 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 003573 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003662 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003674 00000 ------------ T 0.67 0.54 0.61 C 0.33 0.46 0.39 0000 --- --- --- --- 003677 00000 ------------ C 0.85 0.66 0.76 T 0.15 0.34 0.24 0000 --- --- --- --- 003739 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003766 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003767 00000 ------------ T 0.71 0.67 0.69 C 0.29 0.33 0.31 0000 --- --- --- --- 003800 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003814 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004127 00000 ------------ G 0.70 0.80 0.74 A 0.30 0.20 0.26 0000 --- --- --- --- 004703 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 004921 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 004936 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005370 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005482 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005498 00000 ------------ C 0.75 0.65 0.70 T 0.25 0.35 0.30 0000 --- --- --- --- 005518 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 005696 00000 ------------ G 0.79 0.90 0.85 A 0.21 0.10 0.15 0000 --- --- --- --- 006348 00000 ------------ C 0.63 0.55 0.59 T 0.37 0.45 0.41 0000 --- --- --- --- 006465 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006504 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006664 00000 ------------ A 0.64 0.43 0.53 G 0.36 0.57 0.47 0000 --- --- --- --- 006748 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006875 00000 ------------ G 0.63 0.52 0.58 T 0.37 0.48 0.42 0000 --- --- --- --- 006913 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006923 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 007208 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 007246 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 007337 00000 ------------ A 0.73 0.50 0.62 G 0.27 0.50 0.38 0000 --- --- --- --- 007556 00000 ------------ C 0.68 0.50 0.59 T 0.32 0.50 0.41 0000 --- --- --- --- 007916 00000 ------------ C 0.74 0.57 0.65 A 0.26 0.43 0.35 0000 --- --- --- --- 008033 00000 ------------ A 0.86 0.78 0.82 T 0.14 0.22 0.18 0000 --- --- --- --- 008205 00000 ------------ G 0.94 0.72 0.82 C 0.06 0.28 0.18 0000 --- --- --- --- 008346 00000 ------------ - 0.43 0.74 0.59 + 0.57 0.26 0.41 0000 --- --- --- --- 008712 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 008713 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 008715 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 008811 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008873 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008881 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008900 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 008901 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009042 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 009542 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009655 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009881 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010026 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 010080 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 010150 00000 ------------ A 0.62 0.91 0.77 G 0.38 0.09 0.23 0000 --- --- --- --- 010342 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 010709 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010769 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010869 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011232 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011247 00000 ------------ A 0.81 0.96 0.88 G 0.19 0.04 0.12 0000 --- --- --- --- 011635 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 011636 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 011883 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011905 00000 ------------ C 0.91 0.95 0.93 T 0.09 0.05 0.07 0000 --- --- --- --- 012019 00000 ------------ G 0.98 0.93 0.95 A 0.02 0.07 0.05 0000 --- --- --- --- 012652 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 013123 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013471 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013501 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 013547 00000 ------------ A 0.50 0.72 0.62 C 0.50 0.28 0.38 0000 --- --- --- --- 013560 00000 ------------ - 0.05 0.02 0.04 + 0.95 0.98 0.96 0000 --- --- --- --- 013605 00000 ------------ A 0.97 0.96 0.96 G 0.03 0.04 0.04 0000 --- --- --- --- 013787 00000 ------------ - 0.83 0.96 0.89 + 0.17 0.04 0.11 0000 --- --- --- --- 013969 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014001 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014281 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014464 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 014469 00000 ------------ A 0.79 0.80 0.80 G 0.21 0.20 0.20 0000 --- --- --- --- 014473 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014867 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 015161 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015562 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 015586 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015614 00000 ------------ A 0.89 0.95 0.92 T 0.11 0.05 0.08 0000 --- --- --- --- 016171 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 016660 00000 ------------ T 0.95 0.95 0.95 C 0.05 0.05 0.05 0000 --- --- --- --- 016697 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017426 00000 ------------ A 0.65 0.65 0.65 G 0.35 0.35 0.35 0000 --- --- --- --- 017547 00000 ------------ T 0.89 0.94 0.91 C 0.11 0.06 0.09 0000 --- --- --- --- 017927 00000 ------------ - 0.68 0.74 0.71 + 0.33 0.26 0.29 0000 --- --- --- --- 018020 00000 ------------ A 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 018286 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 018327 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018752 00599 SYNON A 0.95 1.00 0.98 G 0.05 0.00 0.02 0177 TCA TCG SER(S) SER(S) 018792 00639 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0191 CGC TGC ARG(R) CYS(C) 019132 00000 ------------ C 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 019237 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019479 00000 ------------ G 0.65 0.70 0.67 C 0.35 0.30 0.33 0000 --- --- --- --- 019480 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019669 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020024 00000 ------------ T 0.65 0.72 0.68 G 0.35 0.28 0.32 0000 --- --- --- --- 020131 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020384 00000 ------------ C 0.75 0.76 0.76 G 0.25 0.24 0.24 0000 --- --- --- --- 020924 00000 ------------ G 0.58 0.72 0.65 A 0.42 0.28 0.35 0000 --- --- --- --- 020941 00000 ------------ G 0.63 0.72 0.67 A 0.37 0.28 0.33 0000 --- --- --- --- 020982 00000 ------------ A 0.65 0.72 0.68 G 0.35 0.28 0.32 0000 --- --- --- --- 021379 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 021766 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 021840 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022499 00000 ------------ G 0.90 0.76 0.84 A 0.10 0.24 0.16 0000 --- --- --- --- 022618 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022807 01022 NON-SYN C 0.96 1.00 0.98 G 0.04 0.00 0.02 0318 AGC AGG SER(S) ARG(R) 023302 01517 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0483 GCC GCT ALA(A) ALA(A) 023303 01518 NON-SYN G 0.85 1.00 0.92 A 0.15 0.00 0.08 0484 GGC AGC GLY(G) SER(S) 023525 01740 3' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023763 01978 3' UTR G 0.71 0.81 0.76 A 0.29 0.19 0.24 0000 --- --- --- --- 023934 02149 3' UTR G 0.96 0.76 0.86 A 0.04 0.24 0.14 0000 --- --- --- --- 024040 02255 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024067 02282 3' UTR C 0.63 0.76 0.70 A 0.37 0.24 0.30 0000 --- --- --- --- 024268 02483 3' UTR G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 024340 02555 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024387 02602 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 024557 02772 3' UTR C 0.67 0.75 0.71 G 0.33 0.25 0.29 0000 --- --- --- --- 026180 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026314 00000 ------------ C 0.69 0.76 0.73 T 0.31 0.24 0.27 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000975: T 001260: A 002361: AAG 003400: A 004921: A 008346: C 013501: TC 013560: AC 013787: CA 017927: GC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000206 00000 ------------ A 0.67 0.48 0.57 G 0.33 0.52 0.43 0000 --- --- --- --- 000301 00000 ------------ G 0.69 0.74 0.71 A 0.31 0.26 0.29 0000 --- --- --- --- 000353 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 000418 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000523 00000 ------------ T 0.65 0.76 0.70 A 0.35 0.24 0.30 0000 --- --- --- --- 000575 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 000717 00000 ------------ T 0.50 0.57 0.53 C 0.50 0.43 0.47 0000 --- --- --- --- 000893 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000983 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 000997 00000 ------------ C 0.92 0.85 0.88 T 0.08 0.15 0.12 0000 --- --- --- --- 000998 00000 ------------ C 0.77 0.77 0.77 T 0.23 0.23 0.23 0000 --- --- --- --- 001121 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 001165 00000 ------------ T 0.65 0.48 0.57 A 0.35 0.52 0.43 0000 --- --- --- --- 001412 00000 ------------ C 0.91 0.82 0.87 T 0.09 0.18 0.13 0000 --- --- --- --- 001500 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001628 00000 ------------ C 0.65 0.48 0.57 T 0.35 0.52 0.43 0000 --- --- --- --- 001637 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001749 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002002 00000 ------------ A 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 002575 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002576 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002697 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002820 00000 ------------ G 0.50 0.60 0.55 A 0.50 0.40 0.45 0000 --- --- --- --- 003204 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 003366 00000 ------------ A 0.73 0.57 0.65 C 0.27 0.43 0.35 0000 --- --- --- --- 003723 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003807 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004156 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004290 00000 ------------ G 0.68 0.93 0.81 C 0.33 0.07 0.19 0000 --- --- --- --- 004497 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 004561 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 004615 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004723 00000 ------------ T 0.58 0.48 0.53 A 0.42 0.52 0.47 0000 --- --- --- --- 004829 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005064 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 005096 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005241 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005358 00000 ------------ A 0.96 0.97 0.96 C 0.04 0.03 0.04 0000 --- --- --- --- 005382 00000 ------------ C 0.91 0.76 0.85 A 0.09 0.24 0.15 0000 --- --- --- --- 005442 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005553 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005643 00000 ------------ A 0.92 0.76 0.84 G 0.08 0.24 0.16 0000 --- --- --- --- 005747 00000 ------------ T 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 005851 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006074 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006215 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006508 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006694 00529 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0158 AGT GGT SER(S) GLY(G) 007413 00000 ------------ A 0.92 0.82 0.87 T 0.08 0.18 0.13 0000 --- --- --- --- 007731 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007754 00000 ------------ T 0.94 0.98 0.96 C 0.06 0.02 0.04 0000 --- --- --- --- 007809 00000 ------------ A 0.67 0.76 0.71 T 0.33 0.24 0.29 0000 --- --- --- --- 008282 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005064: CCCCCTTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000766 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 000938 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001023 00000 ------------ A 0.64 0.41 0.52 C 0.36 0.59 0.48 0000 --- --- --- --- 001063 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 001334 00000 ------------ T 0.82 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 001657 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001761 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001769 00000 ------------ A 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 001805 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002108 00164 5' UTR T 0.65 0.45 0.56 C 0.35 0.55 0.44 0000 --- --- --- --- 002356 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002461 00000 ------------ C 0.64 0.45 0.55 T 0.36 0.55 0.45 0000 --- --- --- --- 002631 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002707 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003926 00000 ------------ C 0.75 0.80 0.77 T 0.25 0.20 0.23 0000 --- --- --- --- 004321 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 004629 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 005519 00000 ------------ T 0.75 0.83 0.79 A 0.25 0.17 0.21 0000 --- --- --- --- 006325 00000 ------------ A 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 006370 00000 ------------ A 0.82 1.00 0.91 C 0.18 0.00 0.09 0000 --- --- --- --- 006936 00000 ------------ - 0.19 0.00 0.10 + 0.81 1.00 0.90 0000 --- --- --- --- 006940 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 007104 00000 ------------ A 0.67 0.43 0.55 G 0.33 0.57 0.45 0000 --- --- --- --- 007150 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007163 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008122 00000 ------------ C 0.88 0.76 0.82 G 0.12 0.24 0.18 0000 --- --- --- --- 008164 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008526 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 009040 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 009731 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 009748 00000 ------------ G 0.96 0.86 0.91 A 0.04 0.14 0.09 0000 --- --- --- --- 010113 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 010593 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010621 00000 ------------ - 0.18 0.00 0.09 + 0.82 1.00 0.91 0000 --- --- --- --- 010666 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010718 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010861 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 010875 00000 ------------ G 0.78 0.84 0.81 A 0.22 0.16 0.19 0000 --- --- --- --- 010879 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011071 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 011271 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 011272 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 011510 00000 ------------ T 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 011736 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011751 00000 ------------ C 0.89 0.76 0.83 T 0.11 0.24 0.17 0000 --- --- --- --- 011837 00000 ------------ C 0.89 0.76 0.83 T 0.11 0.24 0.17 0000 --- --- --- --- 012022 00000 ------------ T 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 012138 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 012216 00000 ------------ T 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 012347 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012473 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 012891 00000 ------------ T 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 012943 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012950 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 013472 00000 ------------ A 0.88 0.76 0.81 G 0.12 0.24 0.19 0000 --- --- --- --- 013748 00000 ------------ G 0.91 0.74 0.83 A 0.09 0.26 0.17 0000 --- --- --- --- 013890 00348 NON-SYN T 1.00 0.95 0.98 C 0.00 0.05 0.02 0016 CTT CCT LEU(L) PRO(P) 013935 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 014615 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014836 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 015527 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 015956 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 015981 00000 ------------ A 0.84 0.91 0.88 G 0.16 0.09 0.12 0000 --- --- --- --- 016026 00000 ------------ G 0.89 0.75 0.82 A 0.11 0.25 0.18 0000 --- --- --- --- 016377 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016813 00000 ------------ C 0.95 0.96 0.96 T 0.05 0.04 0.04 0000 --- --- --- --- 016838 00000 ------------ A 0.84 0.96 0.90 C 0.16 0.04 0.10 0000 --- --- --- --- 017101 00000 ------------ A 0.96 0.95 0.96 G 0.04 0.05 0.04 0000 --- --- --- --- 017906 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 018083 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 018135 00000 ------------ - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 018147 00000 ------------ G 0.93 0.96 0.94 A 0.07 0.04 0.06 0000 --- --- --- --- 018246 00000 ------------ G 0.98 0.76 0.87 A 0.02 0.24 0.13 0000 --- --- --- --- 018306 00000 ------------ T 0.81 0.96 0.88 C 0.19 0.04 0.12 0000 --- --- --- --- 018520 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018540 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018907 00000 ------------ A 0.77 0.50 0.64 G 0.23 0.50 0.36 0000 --- --- --- --- 019237 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020120 00000 ------------ G 0.96 0.95 0.95 A 0.04 0.05 0.05 0000 --- --- --- --- 020192 00000 ------------ C 0.83 0.95 0.89 T 0.17 0.05 0.11 0000 --- --- --- --- 020204 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020662 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021150 00000 ------------ G 0.90 0.76 0.83 T 0.10 0.24 0.17 0000 --- --- --- --- 021700 00000 ------------ A 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 021892 00000 ------------ T 0.73 0.85 0.79 C 0.27 0.15 0.21 0000 --- --- --- --- 022655 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 023048 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023058 00000 ------------ C 0.50 0.65 0.58 T 0.50 0.35 0.42 0000 --- --- --- --- 023110 00000 ------------ C 0.76 0.50 0.63 A 0.24 0.50 0.37 0000 --- --- --- --- 023275 00000 ------------ G 0.54 0.65 0.60 A 0.46 0.35 0.40 0000 --- --- --- --- 023415 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 023483 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023493 00000 ------------ C 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 023656 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023743 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 023904 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 024068 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024103 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024330 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 024346 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024516 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025403 00000 ------------ C 0.75 0.85 0.80 T 0.25 0.15 0.20 0000 --- --- --- --- 025408 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 025546 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 025619 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 025886 00000 ------------ C 0.76 0.44 0.62 T 0.24 0.56 0.38 0000 --- --- --- --- 025974 00000 ------------ A 0.70 0.89 0.79 G 0.30 0.11 0.21 0000 --- --- --- --- 026544 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 027368 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 027612 00000 ------------ C 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 027668 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 027797 00869 NON-SYN G 0.97 1.00 0.99 A 0.03 0.00 0.01 0190 GAA AAA GLU(E) LYS(K) 028075 00000 ------------ C 0.93 0.89 0.91 T 0.07 0.11 0.09 0000 --- --- --- --- 028630 00000 ------------ G 0.85 0.72 0.79 A 0.15 0.28 0.21 0000 --- --- --- --- 028655 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 030116 01240 3' UTR T 0.90 0.77 0.84 C 0.10 0.23 0.16 0000 --- --- --- --- 030366 01490 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030533 01657 3' UTR A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 030643 01767 3' UTR A 0.92 0.88 0.90 G 0.08 0.12 0.10 0000 --- --- --- --- 031074 02198 3' UTR T 0.78 0.90 0.84 C 0.22 0.10 0.16 0000 --- --- --- --- 031595 02719 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031646 02770 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 031656 02780 3' UTR G 0.94 0.89 0.91 T 0.06 0.11 0.09 0000 --- --- --- --- 031814 00000 ------------ T 0.94 0.89 0.91 C 0.06 0.11 0.09 0000 --- --- --- --- 031893 00000 ------------ C 0.73 0.88 0.80 G 0.27 0.12 0.20 0000 --- --- --- --- 031965 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031988 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 032346 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 032512 00000 ------------ C 0.91 0.78 0.85 T 0.09 0.23 0.15 0000 --- --- --- --- 032520 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006936: CAAACAGAGCAGCCCTTCCA 010621: A 018135: CCATCTT 027368: CAAAA 032520: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000627 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000634 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 000806 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 001619 00000 ------------ - 0.02 0.12 0.07 + 0.98 0.88 0.93 0000 --- --- --- --- 001627 00000 ------------ T 0.98 0.97 0.98 C 0.02 0.03 0.02 0000 --- --- --- --- 001889 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 002049 00153 5' UTR C 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 002461 00000 ------------ - 0.78 1.00 0.90 + 0.23 0.00 0.10 0000 --- --- --- --- 002546 00000 ------------ G 0.96 1.00 0.99 A 0.04 0.00 0.01 0000 --- --- --- --- 003221 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003260 00000 ------------ C 0.74 0.50 0.63 T 0.26 0.50 0.37 0000 --- --- --- --- 003292 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003352 00000 ------------ A 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 003466 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003517 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003530 00000 ------------ C 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 003551 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 003625 00000 ------------ T 0.75 0.50 0.63 C 0.25 0.50 0.37 0000 --- --- --- --- 004061 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004069 00000 ------------ C 0.78 0.50 0.64 T 0.22 0.50 0.36 0000 --- --- --- --- 004082 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004243 00000 ------------ G 0.76 0.50 0.63 A 0.24 0.50 0.37 0000 --- --- --- --- 004254 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004332 00000 ------------ - 0.78 0.50 0.64 + 0.22 0.50 0.36 0000 --- --- --- --- 004585 00000 ------------ G 0.69 1.00 0.83 A 0.31 0.00 0.17 0000 --- --- --- --- 004602 00000 ------------ C 0.73 0.50 0.62 T 0.27 0.50 0.38 0000 --- --- --- --- 004943 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005020 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005389 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 005392 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005519 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006016 00644 NON-SYN T 0.79 0.50 0.65 C 0.21 0.50 0.35 0124 TAC CAC TYR(Y) HIS(H) 006020 00648 NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 0125 CAC CGC HIS(H) ARG(R) 006037 00665 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0131 GTC CTC VAL(V) LEU(L) 006240 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 006282 00000 ------------ C 0.76 0.50 0.63 T 0.24 0.50 0.37 0000 --- --- --- --- 006289 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006748 00000 ------------ A 0.76 1.00 0.88 G 0.24 0.00 0.12 0000 --- --- --- --- 006998 00000 ------------ - 0.77 0.50 0.65 + 0.23 0.50 0.35 0000 --- --- --- --- 007241 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007371 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007418 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008314 01694 3' UTR T 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 008321 00000 ------------ A 0.90 0.95 0.92 T 0.10 0.05 0.08 0000 --- --- --- --- 008743 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 009309 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010727 00000 ------------ A 0.79 0.54 0.67 G 0.21 0.46 0.33 0000 --- --- --- --- 010894 00000 ------------ A 0.80 0.54 0.67 G 0.20 0.46 0.33 0000 --- --- --- --- 011077 00000 ------------ A 0.75 0.50 0.59 G 0.25 0.50 0.41 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001619: TA 002461: A 003551: G 004332: G 005389: T 006240: A 006998: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000142 00000 ------------ A 1.00 0.92 0.96 G 0.00 0.08 0.04 0000 --- --- --- --- 000204 00000 ------------ G 0.90 0.68 0.80 A 0.10 0.32 0.20 0000 --- --- --- --- 000442 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000446 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000739 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000759 00000 ------------ C 0.93 0.64 0.78 G 0.07 0.36 0.22 0000 --- --- --- --- 001008 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001055 00000 ------------ T 0.83 0.54 0.68 C 0.17 0.46 0.32 0000 --- --- --- --- 001086 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001169 00000 ------------ T 0.73 0.98 0.85 G 0.27 0.02 0.15 0000 --- --- --- --- 001224 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001319 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 001504 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001626 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001818 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001919 00000 ------------ - 0.15 0.04 0.10 + 0.85 0.96 0.90 0000 --- --- --- --- 001980 00000 ------------ - 0.67 0.98 0.83 + 0.33 0.02 0.17 0000 --- --- --- --- 002264 00000 ------------ T 0.81 0.43 0.63 A 0.19 0.57 0.37 0000 --- --- --- --- 002973 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 003049 00000 ------------ T 0.88 0.62 0.76 C 0.12 0.38 0.24 0000 --- --- --- --- 003217 00000 ------------ - 1.00 0.89 0.95 + 0.00 0.11 0.05 0000 --- --- --- --- 003350 00000 ------------ A 0.90 0.83 0.86 C 0.10 0.17 0.14 0000 --- --- --- --- 003402 00000 ------------ C 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 003953 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 004066 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 004097 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004113 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 004122 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 004168 00000 ------------ G 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 004192 00000 ------------ G 0.65 0.98 0.82 T 0.35 0.02 0.18 0000 --- --- --- --- 004223 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004323 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004479 00000 ------------ A 0.90 0.63 0.78 T 0.10 0.37 0.22 0000 --- --- --- --- 004864 00000 ------------ G 0.76 0.58 0.68 A 0.24 0.42 0.33 0000 --- --- --- --- 004914 00000 ------------ C 0.93 0.66 0.80 T 0.07 0.34 0.20 0000 --- --- --- --- 004984 00000 ------------ G 0.93 0.67 0.81 A 0.07 0.33 0.19 0000 --- --- --- --- 005027 00000 ------------ G 0.79 0.42 0.61 A 0.21 0.58 0.39 0000 --- --- --- --- 005361 00000 ------------ C 0.90 0.83 0.87 T 0.10 0.17 0.13 0000 --- --- --- --- 005509 00000 ------------ C 0.75 0.60 0.67 T 0.25 0.40 0.33 0000 --- --- --- --- 005724 00000 ------------ G 0.78 0.43 0.61 C 0.22 0.57 0.39 0000 --- --- --- --- 005810 00000 ------------ A 0.89 0.64 0.77 G 0.11 0.36 0.23 0000 --- --- --- --- 005965 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006017 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 006410 00000 ------------ C 0.85 0.95 0.90 T 0.15 0.05 0.10 0000 --- --- --- --- 006413 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006528 00000 ------------ C 0.87 0.83 0.85 T 0.13 0.17 0.15 0000 --- --- --- --- 006554 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006565 00000 ------------ A 0.91 0.63 0.77 G 0.09 0.37 0.23 0000 --- --- --- --- 006576 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006646 00000 ------------ A 0.74 0.98 0.86 C 0.26 0.02 0.14 0000 --- --- --- --- 006673 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006885 00000 ------------ G 0.96 0.83 0.89 A 0.04 0.17 0.11 0000 --- --- --- --- 007095 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 007204 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 007313 00000 ------------ T 0.76 0.57 0.67 C 0.24 0.42 0.33 0000 --- --- --- --- 007318 00000 ------------ - 0.98 0.88 0.93 + 0.02 0.12 0.07 0000 --- --- --- --- 007330 00000 ------------ C 0.88 0.95 0.91 A 0.12 0.05 0.09 0000 --- --- --- --- 007488 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007523 00000 ------------ C 0.95 0.94 0.94 T 0.05 0.06 0.06 0000 --- --- --- --- 007677 00122 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0029 ACC ACT THR(T) THR(T) 008053 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 008364 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008558 00000 ------------ - 0.11 0.37 0.24 + 0.89 0.63 0.76 0000 --- --- --- --- 009538 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 009545 00000 ------------ T 0.73 0.59 0.66 C 0.27 0.41 0.34 0000 --- --- --- --- 009641 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009702 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 009861 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009869 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010159 00000 ------------ C 0.72 0.66 0.69 A 0.28 0.34 0.31 0000 --- --- --- --- 010334 00000 ------------ T 0.78 0.97 0.87 C 0.23 0.03 0.13 0000 --- --- --- --- 010343 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010468 00000 ------------ C 0.74 0.63 0.69 T 0.26 0.37 0.31 0000 --- --- --- --- 010499 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010516 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 010546 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 010663 00000 ------------ G 0.81 0.95 0.88 A 0.19 0.05 0.12 0000 --- --- --- --- 010749 00000 ------------ G 0.85 0.95 0.90 C 0.15 0.05 0.10 0000 --- --- --- --- 010780 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010821 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010828 00000 ------------ T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 010855 00000 ------------ T 0.89 0.62 0.76 G 0.11 0.38 0.24 0000 --- --- --- --- 011071 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011081 00000 ------------ T 0.71 0.57 0.64 C 0.29 0.43 0.36 0000 --- --- --- --- 011085 00000 ------------ T 0.83 0.95 0.89 G 0.17 0.05 0.11 0000 --- --- --- --- 011256 00000 ------------ C 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 011625 00000 ------------ G 0.85 1.00 0.91 A 0.15 0.00 0.09 0000 --- --- --- --- 011679 00000 ------------ T 0.88 0.82 0.85 G 0.12 0.17 0.15 0000 --- --- --- --- 011929 00000 ------------ T 0.92 0.83 0.88 G 0.08 0.17 0.12 0000 --- --- --- --- 012385 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012389 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 012432 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012480 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012522 00000 ------------ C 0.75 0.98 0.86 T 0.25 0.02 0.14 0000 --- --- --- --- 012565 00000 ------------ C 0.75 0.98 0.86 T 0.25 0.02 0.14 0000 --- --- --- --- 012566 00000 ------------ A 0.30 0.81 0.55 G 0.70 0.19 0.45 0000 --- --- --- --- 012648 00000 ------------ C 0.30 0.81 0.55 T 0.70 0.19 0.45 0000 --- --- --- --- 012726 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 012749 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 012909 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013090 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013388 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013551 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013628 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013640 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013907 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 013918 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 014029 00000 ------------ T 0.93 0.65 0.79 C 0.07 0.35 0.21 0000 --- --- --- --- 014217 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 014356 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014574 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 014599 00000 ------------ T 0.91 0.57 0.75 G 0.09 0.42 0.25 0000 --- --- --- --- 014648 00000 ------------ A 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 014802 00000 ------------ - 0.95 0.86 0.90 + 0.05 0.14 0.10 0000 --- --- --- --- 015113 00000 ------------ - 0.88 0.55 0.72 + 0.12 0.45 0.28 0000 --- --- --- --- 015720 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015974 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016069 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016134 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 016243 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 016285 00000 ------------ - 0.08 0.36 0.22 + 0.92 0.64 0.78 0000 --- --- --- --- 016331 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016666 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016685 00000 ------------ T 1.00 0.75 0.88 A 0.00 0.25 0.12 0000 --- --- --- --- 016691 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 016693 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 017130 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017243 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 017387 00000 ------------ T 0.89 0.86 0.87 C 0.11 0.14 0.13 0000 --- --- --- --- 017406 00000 ------------ T 0.86 0.84 0.85 C 0.14 0.16 0.15 0000 --- --- --- --- 018042 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018085 00000 ------------ C 0.60 0.98 0.78 T 0.40 0.02 0.22 0000 --- --- --- --- 018183 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018311 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 018595 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 018645 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 018816 00000 ------------ A 0.82 0.88 0.85 C 0.18 0.12 0.15 0000 --- --- --- --- 019115 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 019583 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 019618 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 019788 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 020051 00000 ------------ C 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 020187 00000 ------------ - 0.13 0.02 0.08 + 0.87 0.98 0.92 0000 --- --- --- --- 020298 00000 ------------ G 0.89 0.83 0.86 A 0.11 0.17 0.14 0000 --- --- --- --- 020318 00000 ------------ A 0.89 0.83 0.86 G 0.11 0.17 0.14 0000 --- --- --- --- 020580 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020630 00000 ------------ C 0.63 0.38 0.51 G 0.37 0.62 0.49 0000 --- --- --- --- 020884 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 020922 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 021082 00000 ------------ A 0.92 0.63 0.78 G 0.08 0.37 0.22 0000 --- --- --- --- 021249 00000 ------------ C 0.75 0.98 0.86 T 0.25 0.02 0.14 0000 --- --- --- --- 021415 00000 ------------ - 0.85 0.83 0.84 + 0.15 0.17 0.16 0000 --- --- --- --- 021442 00000 ------------ C 0.90 0.82 0.86 G 0.10 0.18 0.14 0000 --- --- --- --- 021465 00000 ------------ G 0.84 0.95 0.89 C 0.16 0.05 0.11 0000 --- --- --- --- 021650 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021690 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 022021 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022049 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 022373 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022494 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022642 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 022660 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 022804 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023156 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023170 00000 ------------ G 0.92 0.68 0.80 C 0.08 0.32 0.20 0000 --- --- --- --- 023217 00000 ------------ T 0.75 0.98 0.86 A 0.25 0.02 0.14 0000 --- --- --- --- 023299 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 023590 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 023659 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023684 00000 ------------ G 0.85 0.83 0.84 C 0.15 0.17 0.16 0000 --- --- --- --- 023954 00000 ------------ C 0.94 0.72 0.83 T 0.06 0.28 0.17 0000 --- --- --- --- 024388 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024555 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 024898 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024908 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 025034 00000 ------------ C 0.92 0.64 0.78 T 0.08 0.36 0.22 0000 --- --- --- --- 025417 00000 ------------ T 0.92 0.62 0.79 C 0.08 0.38 0.21 0000 --- --- --- --- 025455 00000 ------------ - 0.08 0.38 0.20 + 0.92 0.62 0.80 0000 --- --- --- --- 025543 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025840 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026046 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026962 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 027032 00000 ------------ G 0.94 0.63 0.79 A 0.06 0.37 0.21 0000 --- --- --- --- 027059 00000 ------------ A 0.73 0.98 0.85 T 0.27 0.02 0.15 0000 --- --- --- --- 027227 00000 ------------ C 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 027284 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027316 00000 ------------ G 0.92 0.63 0.78 A 0.08 0.37 0.22 0000 --- --- --- --- 027401 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 027638 00000 ------------ - 0.15 0.28 0.21 + 0.85 0.72 0.79 0000 --- --- --- --- 027948 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 028022 00000 ------------ - 0.89 1.00 0.95 + 0.11 0.00 0.05 0000 --- --- --- --- 028082 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028095 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028302 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028373 00000 ------------ - 0.79 0.89 0.84 + 0.21 0.11 0.16 0000 --- --- --- --- 028396 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028478 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028653 00000 ------------ C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 028966 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029233 00000 ------------ G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 029593 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029947 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030049 00000 ------------ T 0.73 0.64 0.68 C 0.27 0.36 0.32 0000 --- --- --- --- 030345 00000 ------------ T 0.83 0.95 0.89 A 0.17 0.05 0.11 0000 --- --- --- --- 030557 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030595 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030732 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 030823 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 030826 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030852 00000 ------------ T 0.98 0.97 0.97 C 0.02 0.03 0.03 0000 --- --- --- --- 030950 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031084 00000 ------------ - 0.05 0.00 0.03 + 0.95 1.00 0.97 0000 --- --- --- --- 031252 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 031348 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 031416 00000 ------------ A 0.93 0.96 0.94 G 0.07 0.04 0.06 0000 --- --- --- --- 031780 00821 3' UTR - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 031948 00989 3' UTR G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031991 01032 3' UTR A 0.93 0.96 0.95 G 0.07 0.04 0.05 0000 --- --- --- --- 032179 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 032359 00000 ------------ C 0.67 1.00 0.82 A 0.33 0.00 0.17 0000 --- --- --- --- 032732 00000 ------------ A 0.77 1.00 0.89 C 0.23 0.00 0.11 0000 --- --- --- --- 032771 00000 ------------ G 0.73 1.00 0.87 A 0.27 0.00 0.13 0000 --- --- --- --- 033001 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033241 00000 ------------ G 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 033493 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033506 00000 ------------ T 0.73 1.00 0.85 G 0.27 0.00 0.15 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001919: G 001980: T 003217: C 004323: GTCA 006017: AAAT 007318: T 008558: AAGTCT 009538: T 010343: CAAATTAACTGAG 010516: ATTA 013907: T 013918: T 014217: T 014802: T 015113: T 016285: GTTTAT 018311: T 019115: AA 020187: AAGAA 021415: T 022049: G 025455: CATT 027638: TCAG 028022: G 028373: T 031084: ATTT 031780: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000168 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 000235 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 000237 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 000240 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 000305 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000357 00000 ------------ G 0.87 0.63 0.75 T 0.13 0.37 0.25 0000 --- --- --- --- 000476 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 000880 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001055 00000 ------------ - 0.15 0.37 0.26 + 0.85 0.63 0.74 0000 --- --- --- --- 001344 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001462 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002431 00000 ------------ G 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 002559 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002692 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003425 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003436 00000 ------------ T 0.88 0.64 0.77 C 0.12 0.36 0.23 0000 --- --- --- --- 003457 00000 ------------ - 0.98 0.88 0.93 + 0.02 0.12 0.07 0000 --- --- --- --- 003469 00000 ------------ C 0.67 0.62 0.65 T 0.33 0.38 0.35 0000 --- --- --- --- 004182 00000 ------------ G 0.97 0.96 0.96 A 0.03 0.04 0.04 0000 --- --- --- --- 004403 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004481 00000 ------------ A 0.87 0.69 0.78 G 0.13 0.31 0.22 0000 --- --- --- --- 004764 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004784 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005021 00000 ------------ G 0.85 1.00 0.91 T 0.15 0.00 0.09 0000 --- --- --- --- 005065 00000 ------------ T 0.86 0.72 0.79 A 0.14 0.28 0.21 0000 --- --- --- --- 005469 00000 ------------ C 0.89 0.68 0.79 T 0.11 0.32 0.21 0000 --- --- --- --- 005723 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 006055 00000 ------------ C 0.82 1.00 0.92 T 0.17 0.00 0.08 0000 --- --- --- --- 006307 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 006308 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 007070 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007123 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007149 00000 ------------ A 0.97 0.89 0.93 G 0.03 0.11 0.07 0000 --- --- --- --- 007245 00000 ------------ A 0.75 0.50 0.62 G 0.25 0.50 0.38 0000 --- --- --- --- 007370 00000 ------------ A 0.61 0.50 0.56 G 0.39 0.50 0.44 0000 --- --- --- --- 007402 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007627 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 008018 00000 ------------ T 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 008942 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 009060 00000 ------------ A 0.58 0.54 0.56 G 0.42 0.46 0.44 0000 --- --- --- --- 009242 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009302 00000 ------------ C 0.58 0.54 0.56 T 0.42 0.46 0.44 0000 --- --- --- --- 009378 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009416 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009432 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009558 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 009625 00000 ------------ C 0.67 0.46 0.56 T 0.33 0.54 0.44 0000 --- --- --- --- 009713 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010026 00000 ------------ C 0.67 0.50 0.59 A 0.33 0.50 0.41 0000 --- --- --- --- 010067 00000 ------------ T 0.63 0.48 0.56 G 0.37 0.52 0.44 0000 --- --- --- --- 010297 00000 ------------ G 0.94 0.93 0.93 T 0.06 0.07 0.07 0000 --- --- --- --- 010312 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010389 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 010648 00000 ------------ C 0.82 0.60 0.71 T 0.18 0.40 0.29 0000 --- --- --- --- 010748 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010767 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 010792 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010815 00000 ------------ T 0.82 0.60 0.71 A 0.18 0.40 0.29 0000 --- --- --- --- 011372 00000 ------------ - 0.48 0.60 0.54 + 0.52 0.40 0.46 0000 --- --- --- --- 011620 00000 ------------ - 0.27 0.38 0.32 + 0.73 0.62 0.68 0000 --- --- --- --- 011871 00000 ------------ T 0.81 0.93 0.87 G 0.19 0.07 0.13 0000 --- --- --- --- 011988 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012047 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013085 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013086 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 013781 00000 ------------ T 0.83 0.65 0.74 C 0.17 0.35 0.26 0000 --- --- --- --- 013879 00000 ------------ A 0.91 0.57 0.74 C 0.09 0.43 0.26 0000 --- --- --- --- 014015 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 014132 00000 ------------ G 0.83 0.70 0.77 A 0.17 0.30 0.23 0000 --- --- --- --- 014170 00000 ------------ G 0.83 0.70 0.77 A 0.17 0.30 0.23 0000 --- --- --- --- 014580 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 014582 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 014650 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014944 00000 ------------ A 0.89 0.54 0.72 T 0.11 0.46 0.28 0000 --- --- --- --- 015077 00000 ------------ G 0.74 0.61 0.67 A 0.26 0.39 0.33 0000 --- --- --- --- 015085 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015208 00000 ------------ A 0.85 0.72 0.78 T 0.15 0.28 0.22 0000 --- --- --- --- 015903 00000 ------------ T 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 015981 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 016114 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016215 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016224 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016384 00000 ------------ A 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 016444 00000 ------------ - 0.07 0.13 0.10 + 0.93 0.87 0.90 0000 --- --- --- --- 016654 00000 ------------ T 0.39 0.89 0.64 C 0.61 0.11 0.36 0000 --- --- --- --- 016829 00000 ------------ G 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 016830 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016883 00000 ------------ C 0.79 0.57 0.68 A 0.21 0.43 0.32 0000 --- --- --- --- 016933 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 017035 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017482 00000 ------------ T 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 017492 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 017526 00000 ------------ T 0.60 0.55 0.58 C 0.40 0.45 0.42 0000 --- --- --- --- 018396 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018431 00000 ------------ C 0.90 0.54 0.72 T 0.10 0.46 0.28 0000 --- --- --- --- 018600 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018823 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018859 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018930 00000 ------------ C 0.92 0.65 0.79 A 0.08 0.35 0.21 0000 --- --- --- --- 019199 00000 ------------ G 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 019339 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 019840 00000 ------------ A 0.75 0.59 0.67 G 0.25 0.41 0.33 0000 --- --- --- --- 019892 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 019933 00000 ------------ C 0.90 0.65 0.78 A 0.10 0.35 0.22 0000 --- --- --- --- 020014 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 020060 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020072 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 020132 00000 ------------ G 0.69 0.57 0.63 T 0.31 0.43 0.37 0000 --- --- --- --- 020585 00000 ------------ T 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 021617 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 021716 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022074 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022200 00000 ------------ T 0.50 0.54 0.52 C 0.50 0.46 0.48 0000 --- --- --- --- 022202 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 022896 00000 ------------ G 0.89 0.69 0.79 A 0.11 0.31 0.21 0000 --- --- --- --- 022933 00000 ------------ T 0.93 0.93 0.93 C 0.07 0.07 0.07 0000 --- --- --- --- 022943 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022986 00000 ------------ C 0.52 0.50 0.51 T 0.48 0.50 0.49 0000 --- --- --- --- 023272 00000 ------------ C 0.92 0.65 0.79 A 0.08 0.35 0.21 0000 --- --- --- --- 023666 00000 ------------ C 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 023667 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 023713 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023796 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 023829 00000 ------------ T 0.92 0.66 0.79 G 0.08 0.34 0.21 0000 --- --- --- --- 024135 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 024184 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024290 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 024301 00000 ------------ G 0.85 0.93 0.89 T 0.15 0.07 0.11 0000 --- --- --- --- 024819 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 024995 00000 ------------ G 0.94 0.95 0.95 T 0.06 0.05 0.05 0000 --- --- --- --- 025008 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 025185 00000 ------------ A 0.79 0.83 0.81 G 0.21 0.17 0.19 0000 --- --- --- --- 025431 00000 ------------ G 0.69 0.59 0.64 C 0.31 0.41 0.36 0000 --- --- --- --- 025513 00000 ------------ A 0.90 0.72 0.81 G 0.10 0.28 0.19 0000 --- --- --- --- 025538 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 025588 00000 ------------ T 0.85 0.91 0.88 G 0.15 0.09 0.12 0000 --- --- --- --- 026379 00000 ------------ T 0.79 0.48 0.64 C 0.21 0.52 0.36 0000 --- --- --- --- 026576 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 026730 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026746 00000 ------------ T 0.86 0.60 0.73 C 0.14 0.40 0.27 0000 --- --- --- --- 026881 00000 ------------ G 0.58 0.52 0.55 A 0.42 0.48 0.45 0000 --- --- --- --- 027073 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 027190 00000 ------------ A 0.80 0.90 0.85 C 0.20 0.10 0.15 0000 --- --- --- --- 027208 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 027429 00000 ------------ C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 027435 00000 ------------ - 0.13 0.00 0.07 + 0.87 1.00 0.93 0000 --- --- --- --- 027461 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027672 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 027684 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 027686 00000 ------------ C 0.92 0.66 0.79 T 0.08 0.34 0.21 0000 --- --- --- --- 027746 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027748 00000 ------------ - 0.12 0.00 0.07 + 0.88 1.00 0.93 0000 --- --- --- --- 027821 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 027835 00000 ------------ C 0.94 0.95 0.95 T 0.06 0.05 0.05 0000 --- --- --- --- 027888 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028146 00000 ------------ G 0.62 0.87 0.74 T 0.38 0.13 0.26 0000 --- --- --- --- 028193 00000 ------------ C 0.77 0.89 0.83 T 0.23 0.11 0.17 0000 --- --- --- --- 028355 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028380 00000 ------------ A 0.90 0.67 0.79 C 0.10 0.33 0.21 0000 --- --- --- --- 028391 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 028405 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 028429 00000 ------------ G 0.83 0.63 0.73 A 0.17 0.37 0.27 0000 --- --- --- --- 028464 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 028465 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 028674 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 028897 00000 ------------ G 0.94 0.95 0.94 A 0.06 0.05 0.06 0000 --- --- --- --- 029034 00000 ------------ G 0.69 0.91 0.79 C 0.31 0.09 0.21 0000 --- --- --- --- 029393 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029441 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 029644 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029714 00000 ------------ - 0.41 0.72 0.57 + 0.59 0.28 0.43 0000 --- --- --- --- 029821 00000 ------------ - 0.89 0.91 0.90 + 0.11 0.09 0.10 0000 --- --- --- --- 030151 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 030295 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 030396 00000 ------------ C 0.40 0.72 0.55 A 0.60 0.28 0.45 0000 --- --- --- --- 030731 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 030834 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030868 00000 ------------ G 0.75 0.93 0.84 A 0.25 0.07 0.16 0000 --- --- --- --- 030972 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 031016 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 031066 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031079 00000 ------------ G 0.80 0.93 0.87 A 0.20 0.07 0.13 0000 --- --- --- --- 031593 00000 ------------ A 0.41 0.77 0.59 G 0.59 0.23 0.41 0000 --- --- --- --- 031761 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031776 00000 ------------ G 0.76 0.61 0.69 C 0.24 0.39 0.31 0000 --- --- --- --- 031786 00000 ------------ C 0.91 0.66 0.79 T 0.09 0.34 0.21 0000 --- --- --- --- 031801 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032026 00000 ------------ C 0.75 0.59 0.67 T 0.25 0.41 0.33 0000 --- --- --- --- 032108 00000 ------------ - 0.83 0.63 0.73 + 0.17 0.37 0.27 0000 --- --- --- --- 032145 00000 ------------ C 0.83 0.63 0.73 T 0.17 0.37 0.27 0000 --- --- --- --- 032285 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 032298 00000 ------------ T 0.69 0.89 0.79 C 0.31 0.11 0.21 0000 --- --- --- --- 032839 00000 ------------ C 0.71 0.47 0.60 A 0.29 0.53 0.40 0000 --- --- --- --- 032853 00000 ------------ T 0.86 0.61 0.74 C 0.14 0.39 0.26 0000 --- --- --- --- 032902 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033467 00000 ------------ C 0.94 0.93 0.93 A 0.06 0.07 0.07 0000 --- --- --- --- 033559 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033723 00000 ------------ T 0.85 0.95 0.90 C 0.15 0.05 0.10 0000 --- --- --- --- 033800 00000 ------------ T 0.60 0.55 0.58 C 0.40 0.45 0.42 0000 --- --- --- --- 033873 00000 ------------ A 0.48 0.55 0.51 G 0.52 0.45 0.49 0000 --- --- --- --- 033920 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033934 00000 ------------ G 0.48 0.55 0.51 T 0.52 0.45 0.49 0000 --- --- --- --- 034134 00000 ------------ C 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 034181 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 034419 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 034774 00000 ------------ A 0.95 0.75 0.85 G 0.05 0.25 0.15 0000 --- --- --- --- 034848 00000 ------------ G 0.83 0.95 0.90 A 0.17 0.05 0.10 0000 --- --- --- --- 034880 00000 ------------ G 0.98 0.93 0.95 A 0.02 0.07 0.05 0000 --- --- --- --- 034943 00000 ------------ G 0.83 0.95 0.90 T 0.17 0.05 0.10 0000 --- --- --- --- 035011 00000 ------------ G 0.85 0.59 0.71 A 0.15 0.41 0.29 0000 --- --- --- --- 035067 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 035396 00000 ------------ C 0.75 0.59 0.67 T 0.25 0.41 0.33 0000 --- --- --- --- 035552 00000 ------------ C 0.87 0.98 0.92 T 0.13 0.02 0.08 0000 --- --- --- --- 035688 00000 ------------ G 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 035740 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 035782 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035819 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 035951 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 035954 00000 ------------ G 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 036022 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036094 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 036330 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 036334 00000 ------------ G 0.85 0.96 0.90 A 0.15 0.04 0.10 0000 --- --- --- --- 036374 00000 ------------ A 0.88 0.98 0.93 G 0.12 0.02 0.07 0000 --- --- --- --- 036666 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 036884 00000 ------------ - 0.15 0.04 0.10 + 0.85 0.96 0.90 0000 --- --- --- --- 037179 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 037560 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037717 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037725 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 037761 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 037805 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 037884 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038219 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038258 00242 SYNON G 0.80 0.98 0.89 A 0.20 0.02 0.11 0028 CCG CCA PRO(P) PRO(P) 038539 00000 ------------ T 0.82 0.59 0.72 C 0.18 0.41 0.28 0000 --- --- --- --- 038764 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 038791 00000 ------------ A 0.98 0.94 0.96 G 0.02 0.06 0.04 0000 --- --- --- --- 038924 00000 ------------ G 0.91 0.68 0.81 T 0.09 0.32 0.19 0000 --- --- --- --- 038994 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 039040 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 039611 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 039641 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 039659 00000 ------------ C 0.93 0.69 0.81 T 0.07 0.31 0.19 0000 --- --- --- --- 039765 00000 ------------ C 0.52 0.86 0.68 T 0.48 0.14 0.32 0000 --- --- --- --- 039766 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 039810 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 039863 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040027 00000 ------------ G 0.91 0.69 0.81 C 0.09 0.31 0.19 0000 --- --- --- --- 040032 00000 ------------ A 0.85 0.60 0.73 T 0.15 0.40 0.27 0000 --- --- --- --- 040078 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040310 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 040591 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 040616 00000 ------------ T 0.54 0.87 0.70 C 0.46 0.13 0.30 0000 --- --- --- --- 040853 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 040856 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 041016 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 041386 00000 ------------ - 0.11 0.37 0.24 + 0.89 0.63 0.76 0000 --- --- --- --- 041611 00000 ------------ - 0.54 0.87 0.71 + 0.46 0.13 0.29 0000 --- --- --- --- 041666 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 042047 00000 ------------ A 0.98 0.83 0.90 G 0.02 0.17 0.10 0000 --- --- --- --- 042079 00000 ------------ G 0.92 0.67 0.80 A 0.08 0.33 0.20 0000 --- --- --- --- 042194 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 042384 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042444 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042465 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042554 00000 ------------ G 0.73 0.98 0.85 A 0.27 0.02 0.15 0000 --- --- --- --- 042720 00674 SYNON C 0.96 0.97 0.96 T 0.04 0.03 0.04 0172 CAC CAT HIS(H) HIS(H) 042845 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 042873 00000 ------------ C 0.83 0.97 0.89 T 0.17 0.03 0.11 0000 --- --- --- --- 042909 00000 ------------ G 0.72 0.87 0.79 A 0.28 0.13 0.21 0000 --- --- --- --- 042975 00000 ------------ T 0.91 0.66 0.79 C 0.09 0.34 0.21 0000 --- --- --- --- 043040 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 043291 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 043295 00000 ------------ - 0.26 0.11 0.19 + 0.74 0.89 0.81 0000 --- --- --- --- 043313 00000 ------------ A 0.59 0.45 0.51 G 0.41 0.55 0.49 0000 --- --- --- --- 044120 00000 ------------ C 0.96 0.97 0.96 T 0.04 0.03 0.04 0000 --- --- --- --- 044177 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 044447 00000 ------------ G 0.89 0.91 0.90 A 0.11 0.09 0.10 0000 --- --- --- --- 044951 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 045101 00000 ------------ G 0.89 0.95 0.92 A 0.11 0.05 0.08 0000 --- --- --- --- 045597 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 045598 00000 ------------ G 0.72 0.89 0.80 A 0.28 0.11 0.20 0000 --- --- --- --- 045795 00000 ------------ G 0.73 0.89 0.80 A 0.27 0.11 0.20 0000 --- --- --- --- 045805 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 045938 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 046171 00911 SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0251 ATC ATT ILE(I) ILE(I) 046213 EXON8 +1 SPLICE G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 046330 00000 ------------ G 0.92 0.84 0.88 T 0.08 0.16 0.12 0000 --- --- --- --- 046524 00000 ------------ T 0.67 0.59 0.63 C 0.33 0.41 0.37 0000 --- --- --- --- 046698 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 046753 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 047493 00000 ------------ G 0.83 0.95 0.89 C 0.17 0.05 0.11 0000 --- --- --- --- 047738 00000 ------------ - 0.18 0.05 0.11 + 0.82 0.95 0.89 0000 --- --- --- --- 047809 00000 ------------ G 0.82 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 047813 00000 ------------ A 0.82 0.76 0.79 G 0.17 0.24 0.21 0000 --- --- --- --- 047837 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 047906 00000 ------------ T 0.91 0.69 0.80 C 0.09 0.31 0.20 0000 --- --- --- --- 047909 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 047913 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 048118 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 048998 00000 ------------ A 0.83 0.67 0.75 C 0.17 0.33 0.25 0000 --- --- --- --- 049048 00000 ------------ C 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 049458 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 049474 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 049645 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 049813 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 049935 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 050625 00000 ------------ G 0.87 0.68 0.79 A 0.13 0.32 0.21 0000 --- --- --- --- 050700 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 050770 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 050820 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 050940 00000 ------------ C 0.96 0.95 0.95 T 0.04 0.05 0.05 0000 --- --- --- --- 050949 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 050984 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 051007 00000 ------------ A 0.93 0.71 0.83 T 0.07 0.29 0.17 0000 --- --- --- --- 051079 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 051105 00000 ------------ G 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 051187 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 051278 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 051316 00000 ------------ - 0.00 0.12 0.05 + 1.00 0.88 0.95 0000 --- --- --- --- 051390 00973 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0272 ATC ACC ILE(I) THR(T) 051449 01032 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 051464 01047 3' UTR G 0.98 0.97 0.98 A 0.02 0.03 0.02 0000 --- --- --- --- 051501 01084 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 051717 01300 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 051838 01421 3' UTR T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 052071 01654 3' UTR G 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 052282 01865 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 052347 01930 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 052363 01946 3' UTR G 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 052418 02001 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 052580 02163 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 052661 02244 3' UTR G 0.69 0.54 0.62 A 0.31 0.46 0.38 0000 --- --- --- --- 052737 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 052855 00000 ------------ T 0.62 0.50 0.56 C 0.38 0.50 0.44 0000 --- --- --- --- 052943 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 053066 00000 ------------ A 0.92 0.85 0.88 T 0.08 0.15 0.12 0000 --- --- --- --- 053096 00000 ------------ C 0.90 0.69 0.80 T 0.10 0.31 0.20 0000 --- --- --- --- 053274 00000 ------------ C 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 053368 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 053388 00000 ------------ G 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 053585 00000 ------------ T 0.82 0.98 0.90 G 0.18 0.02 0.10 0000 --- --- --- --- 054057 00000 ------------ T 1.00 0.91 0.95 C 0.00 0.09 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000235: T 001055: GT 003457: T 007627: T 011372: G 011620: G 016444: TTAT 027435: A 027748: GTTT 029714: T 029821: A 032108: T 036884: TTG 041386: TCCCCCATATCACCCTGCACAGTTATTGGAAGGCTTCAAAGAGGCCAATGCTTGTTGTCCTTTCTCGAAGGCT 041611: T 043295: CTCA 047738: G 047909: CTTATAA 048118: CCTCGC 049474: G 051316: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000587 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001039 00071 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001134 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001426 00000 ------------ A 0.56 0.66 0.61 T 0.44 0.34 0.39 0000 --- --- --- --- 001638 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002000 00000 ------------ C 0.94 0.67 0.81 A 0.06 0.33 0.19 0000 --- --- --- --- 002014 00000 ------------ G 0.54 0.67 0.61 A 0.46 0.33 0.39 0000 --- --- --- --- 002121 00000 ------------ C 0.77 0.68 0.73 T 0.23 0.32 0.27 0000 --- --- --- --- 002329 00000 ------------ C 0.54 0.68 0.61 T 0.46 0.32 0.39 0000 --- --- --- --- 002395 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 002445 00000 ------------ C 0.80 0.65 0.73 T 0.20 0.35 0.27 0000 --- --- --- --- 002493 00000 ------------ C 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 002586 00000 ------------ A 0.60 0.63 0.62 G 0.40 0.37 0.38 0000 --- --- --- --- 002598 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002686 00000 ------------ C 0.77 0.63 0.70 T 0.23 0.37 0.30 0000 --- --- --- --- 002689 00000 ------------ - 0.81 1.00 0.90 + 0.19 0.00 0.10 0000 --- --- --- --- 002746 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003074 00000 ------------ G 0.82 1.00 0.91 C 0.18 0.00 0.09 0000 --- --- --- --- 003581 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003670 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003764 00000 ------------ T 0.98 0.76 0.87 C 0.02 0.24 0.13 0000 --- --- --- --- 003781 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 004077 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004175 00000 ------------ C 0.85 0.74 0.79 T 0.15 0.26 0.21 0000 --- --- --- --- 004267 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004287 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004341 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004736 00000 ------------ C 0.58 0.71 0.64 T 0.42 0.29 0.36 0000 --- --- --- --- 004893 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 004916 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004939 00000 ------------ C 0.69 0.75 0.72 T 0.31 0.25 0.28 0000 --- --- --- --- 005022 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005034 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005063 00000 ------------ T 0.60 0.72 0.66 A 0.40 0.28 0.34 0000 --- --- --- --- 005106 00000 ------------ C 0.88 0.74 0.81 G 0.12 0.26 0.19 0000 --- --- --- --- 005125 00000 ------------ T 0.71 0.75 0.73 C 0.29 0.25 0.27 0000 --- --- --- --- 005241 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005335 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 005808 00000 ------------ - 0.84 0.74 0.79 + 0.16 0.26 0.21 0000 --- --- --- --- 005921 00000 ------------ - 0.85 1.00 0.93 + 0.15 0.00 0.07 0000 --- --- --- --- 006170 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 006214 00000 ------------ T 0.76 0.74 0.75 C 0.24 0.26 0.25 0000 --- --- --- --- 006379 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006817 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 006976 00000 ------------ C 0.75 1.00 0.88 T 0.25 0.00 0.12 0000 --- --- --- --- 007226 00000 ------------ A 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 007742 00000 ------------ G 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 007751 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 007811 00000 ------------ G 0.62 0.78 0.70 A 0.38 0.22 0.30 0000 --- --- --- --- 007952 00000 ------------ T 0.76 1.00 0.89 C 0.24 0.00 0.11 0000 --- --- --- --- 008431 00379 NON-SYN C 0.88 1.00 0.94 T 0.12 0.00 0.06 0083 TCC TTC SER(S) PHE(F) 008611 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 008655 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 008672 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008799 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008980 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009093 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 009191 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009378 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009406 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009425 00000 ------------ A 0.38 0.65 0.51 G 0.62 0.35 0.49 0000 --- --- --- --- 009685 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009705 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009876 00000 ------------ C 0.95 0.98 0.97 T 0.05 0.02 0.03 0000 --- --- --- --- 009881 00000 ------------ C 0.68 0.35 0.51 G 0.32 0.65 0.49 0000 --- --- --- --- 010216 00000 ------------ - 0.30 0.64 0.47 + 0.70 0.36 0.53 0000 --- --- --- --- 010998 00000 ------------ T 0.39 0.66 0.52 C 0.61 0.34 0.48 0000 --- --- --- --- 011167 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 011452 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 011475 00000 ------------ G 0.83 0.72 0.78 A 0.17 0.28 0.22 0000 --- --- --- --- 011503 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011618 00000 ------------ G 0.71 0.71 0.71 C 0.29 0.29 0.29 0000 --- --- --- --- 011876 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 011970 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 011999 00000 ------------ C 0.44 0.65 0.54 T 0.56 0.35 0.46 0000 --- --- --- --- 012145 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012212 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 012407 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012912 00000 ------------ C 0.59 0.68 0.63 T 0.41 0.33 0.37 0000 --- --- --- --- 013080 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013151* 013160 00000 ------------ G 0.48 0.68 0.57 C 0.52 0.32 0.42 0000 --- --- --- --- 013382 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013416 00000 ------------ C 0.98 0.82 0.90 G 0.02 0.18 0.10 0000 --- --- --- --- 013628 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013660 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 013803 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 013878 00000 ------------ G 0.67 0.91 0.78 A 0.33 0.09 0.23 0000 --- --- --- --- 013992 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014181 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 014247 00000 ------------ G 0.65 0.67 0.66 A 0.35 0.33 0.34 0000 --- --- --- --- 014281 00000 ------------ A 0.57 0.68 0.62 G 0.43 0.33 0.38 0000 --- --- --- --- 014432 00000 ------------ G 0.79 0.93 0.86 A 0.21 0.07 0.14 0000 --- --- --- --- 014505 00000 ------------ C 0.79 0.93 0.86 T 0.21 0.07 0.14 0000 --- --- --- --- 014691 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 014739 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 014774 00000 ------------ T 0.79 0.93 0.86 C 0.21 0.07 0.14 0000 --- --- --- --- 014856 00000 ------------ C 0.96 0.73 0.85 A 0.04 0.27 0.15 0000 --- --- --- --- 014876 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014885 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014912 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014978 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 015091 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015425 00000 ------------ C 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 015510 00881 SYNON C 0.67 0.62 0.64 T 0.33 0.38 0.36 0250 GGC GGT GLY(G) GLY(G) 015657 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 015829 00000 ------------ G 0.69 0.63 0.66 A 0.31 0.37 0.34 0000 --- --- --- --- 015847 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015910 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016132 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016183 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016317 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016431 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016614 00000 ------------ T 0.90 0.76 0.83 C 0.10 0.24 0.17 0000 --- --- --- --- 016684 00000 ------------ C 0.81 0.93 0.87 A 0.19 0.07 0.13 0000 --- --- --- --- 016863 00000 ------------ G 0.97 0.69 0.85 A 0.03 0.31 0.15 0000 --- --- --- --- 016885 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017024 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 017044 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017045 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017062 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017148 00000 ------------ T 0.40 0.64 0.52 C 0.60 0.36 0.48 0000 --- --- --- --- 017220 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017222 00000 ------------ C 0.80 0.64 0.72 T 0.20 0.36 0.28 0000 --- --- --- --- 017598 00000 ------------ G 0.89 0.93 0.91 A 0.11 0.07 0.09 0000 --- --- --- --- 018254 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 018340 00000 ------------ C 0.73 0.70 0.71 T 0.27 0.30 0.29 0000 --- --- --- --- 018370 00000 ------------ T 0.73 0.67 0.70 C 0.27 0.33 0.30 0000 --- --- --- --- 018373 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018376 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 018398 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 018584 00000 ------------ A 0.73 0.71 0.72 C 0.27 0.29 0.28 0000 --- --- --- --- 018712 00000 ------------ T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 018848 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.22 0000 --- --- --- --- 018906 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 018920 00000 ------------ T 0.75 0.65 0.70 C 0.25 0.35 0.30 0000 --- --- --- --- 018930 00000 ------------ A 0.73 0.70 0.72 G 0.27 0.30 0.28 0000 --- --- --- --- 019983 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020417 00000 ------------ C 0.72 0.76 0.74 T 0.28 0.24 0.26 0000 --- --- --- --- 020587 00000 ------------ C 0.68 0.71 0.70 T 0.32 0.29 0.30 0000 --- --- --- --- 020599 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 021066 00000 ------------ A 0.50 0.67 0.59 G 0.50 0.33 0.41 0000 --- --- --- --- 021215 00000 ------------ T 0.61 0.67 0.64 C 0.39 0.33 0.36 0000 --- --- --- --- 021437 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 021576 00000 ------------ A 0.64 0.67 0.65 G 0.36 0.33 0.35 0000 --- --- --- --- 021626 00000 ------------ A 0.64 0.67 0.65 G 0.36 0.33 0.35 0000 --- --- --- --- 021738 00000 ------------ A 0.65 0.83 0.74 G 0.35 0.17 0.26 0000 --- --- --- --- 022327 01304 NON-SYN C 0.92 0.83 0.88 A 0.08 0.17 0.12 0391 GAC GAA ASP(D) GLU(E) 022854 01831 3' UTR C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 022902 01879 3' UTR C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 022938 01915 3' UTR G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 023225 02202 3' UTR G 0.50 0.66 0.58 C 0.50 0.34 0.42 0000 --- --- --- --- 023254 02231 3' UTR A 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 023282 02259 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023345 02322 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023456 02433 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023515 02492 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023640 02617 3' UTR T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023918 02895 3' UTR A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 024181 03158 3' UTR A 0.82 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 024655 03632 3' UTR T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 024949 03926 3' UTR A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 025013 03990 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025284 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025468 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025583 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025699 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025735 00000 ------------ G 0.92 0.87 0.89 A 0.08 0.13 0.11 0000 --- --- --- --- 025975 00000 ------------ A 0.72 0.74 0.73 C 0.28 0.26 0.27 0000 --- --- --- --- 026051 00000 ------------ G 0.68 0.62 0.65 C 0.33 0.38 0.35 0000 --- --- --- --- 026092 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 026156 00000 ------------ - 0.33 0.17 0.25 + 0.67 0.83 0.75 0000 --- --- --- --- 026189 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002689: AGCATC 005808: A 005921: T 009705: C 010216: AACC 026156: G The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 013151 A 0.07 0.00 0.04 C 0.45 0.68 0.56 G 0.48 0.32 0.40 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000317 00000 ------------ C 0.70 0.41 0.56 T 0.30 0.59 0.44 0000 --- --- --- --- 001069 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 001111 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 001169 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001634 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 002245 00000 ------------ - 0.86 0.63 0.74 + 0.14 0.37 0.26 0000 --- --- --- --- 002753 00000 ------------ A 0.52 0.93 0.73 G 0.48 0.07 0.27 0000 --- --- --- --- 002866 00339 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0109 GAA AAA GLU(E) LYS(K) 003557 00000 ------------ T 0.77 0.93 0.85 C 0.23 0.07 0.15 0000 --- --- --- --- 004707 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005350 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 006291 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006695 00000 ------------ T 0.72 0.93 0.83 C 0.28 0.07 0.17 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002245: TCTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000274 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000296 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000348 00000 ------------ G 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 000627 00000 ------------ G 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 001219 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 001303 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001844 00000 ------------ C 0.88 0.74 0.81 T 0.12 0.26 0.19 0000 --- --- --- --- 001855 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001902 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001955 -----** NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0015 CGC CAC ARG(R) HIS(H) 001990 -----** NON-SYN C 0.52 0.74 0.63 T 0.48 0.26 0.37 0027 CCC TCC PRO(P) SER(S) 002229 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002714 00000 ------------ G 0.80 0.76 0.78 A 0.20 0.24 0.22 0000 --- --- --- --- 003062 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003129 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003406 00000 ------------ C 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 003651 00000 ------------ T 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 004193 -----** 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004231 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004583 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004718 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004725 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004775 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004845 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004887 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004895 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004994 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005295 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 005857 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005947 00000 ------------ T 0.70 0.59 0.64 C 0.30 0.41 0.36 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001233 00000 ------------ G 0.81 0.57 0.68 A 0.19 0.43 0.32 0000 --- --- --- --- 001239 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001278 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001299 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 001307 00000 ------------ G 0.74 0.80 0.77 T 0.26 0.20 0.23 0000 --- --- --- --- 001398 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001436 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001442 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 001490 00000 ------------ C 1.00 0.85 0.92 T 0.00 0.15 0.08 0000 --- --- --- --- 001524 00000 ------------ A 0.86 0.96 0.91 G 0.14 0.04 0.09 0000 --- --- --- --- 001561 00000 ------------ G 0.53 0.76 0.65 A 0.47 0.24 0.35 0000 --- --- --- --- 001565 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001884 00158 5' UTR G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 002005 00279 5' UTR T 0.89 0.95 0.93 A 0.11 0.05 0.07 0000 --- --- --- --- 002015 00289 5' UTR C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 002018 00292 5' UTR C 0.76 0.67 0.71 T 0.24 0.33 0.29 0000 --- --- --- --- 002049 00000 ------------ C 0.72 0.77 0.75 T 0.28 0.23 0.25 0000 --- --- --- --- 002274 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 002449 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 004728 00000 ------------ T 0.78 0.82 0.80 C 0.23 0.18 0.20 0000 --- --- --- --- 004788 00000 ------------ G 0.94 0.86 0.90 A 0.06 0.14 0.10 0000 --- --- --- --- 006717 00000 ------------ - 0.15 0.00 0.08 + 0.85 1.00 0.92 0000 --- --- --- --- 006792 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006793 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 006817 00000 ------------ C 0.77 0.93 0.86 T 0.23 0.07 0.14 0000 --- --- --- --- 006829 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 006843 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006862 00000 ------------ A 0.69 0.61 0.65 G 0.31 0.39 0.35 0000 --- --- --- --- 006921 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 006935 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006984 00000 ------------ C 0.85 0.98 0.91 G 0.15 0.02 0.09 0000 --- --- --- --- 007024 00348 5' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007059 00383 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0012 GCC ACC ALA(A) THR(T) 007107 00000 ------------ G 0.62 0.95 0.79 A 0.38 0.05 0.21 0000 --- --- --- --- 007195 00000 ------------ T 0.81 0.95 0.88 C 0.19 0.05 0.12 0000 --- --- --- --- 007426 00000 ------------ G 0.77 0.95 0.85 C 0.23 0.05 0.15 0000 --- --- --- --- 007451 00000 ------------ A 0.75 0.95 0.85 G 0.25 0.05 0.15 0000 --- --- --- --- 007457 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007458 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 007459 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 007583 00000 ------------ G 0.85 0.93 0.89 A 0.15 0.07 0.11 0000 --- --- --- --- 007732 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 008153 00000 ------------ A 0.85 0.95 0.90 G 0.15 0.05 0.10 0000 --- --- --- --- 008204 00000 ------------ G 0.52 0.83 0.67 A 0.48 0.17 0.33 0000 --- --- --- --- 008228 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008245 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008250 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008266 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008276 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008281 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008284 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 008291 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008296 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 008314 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008318 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008356 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 009464 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 010550 00000 ------------ T 0.81 0.59 0.69 G 0.19 0.41 0.31 0000 --- --- --- --- 010732 00000 ------------ A 0.96 0.92 0.94 G 0.04 0.08 0.06 0000 --- --- --- --- 010796 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010886 00000 ------------ C 0.89 0.69 0.80 T 0.11 0.31 0.20 0000 --- --- --- --- 011175 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011187 00000 ------------ G 0.81 0.65 0.73 C 0.19 0.35 0.27 0000 --- --- --- --- 011277 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011345 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011349 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011397 00000 ------------ C 0.95 0.97 0.96 T 0.05 0.03 0.04 0000 --- --- --- --- 011469 00000 ------------ G 1.00 0.86 0.92 A 0.00 0.14 0.08 0000 --- --- --- --- 011488 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 011554 00000 ------------ T 0.74 0.81 0.78 C 0.26 0.19 0.22 0000 --- --- --- --- 011620 00000 ------------ C 0.94 0.90 0.92 T 0.06 0.10 0.08 0000 --- --- --- --- 011623 00000 ------------ G 0.69 0.81 0.76 A 0.31 0.19 0.24 0000 --- --- --- --- 011630 00000 ------------ A 0.74 0.81 0.78 G 0.26 0.19 0.22 0000 --- --- --- --- 011633 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011669 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011672 00000 ------------ T 0.93 0.74 0.83 C 0.07 0.26 0.17 0000 --- --- --- --- 011679 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011808 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011818 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011820 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011903 00000 ------------ G 0.42 0.59 0.50 A 0.58 0.41 0.50 0000 --- --- --- --- 012312 00000 ------------ - 0.82 0.50 0.64 + 0.18 0.50 0.36 0000 --- --- --- --- 012434 00000 ------------ T 0.74 0.47 0.60 C 0.26 0.53 0.40 0000 --- --- --- --- 012480 00000 ------------ T 0.87 0.67 0.77 A 0.13 0.33 0.23 0000 --- --- --- --- 012508 00000 ------------ C 0.87 0.67 0.77 A 0.13 0.33 0.23 0000 --- --- --- --- 012512 00000 ------------ T 0.87 0.68 0.78 C 0.13 0.32 0.22 0000 --- --- --- --- 012514 00000 ------------ G 0.92 0.94 0.93 T 0.08 0.06 0.07 0000 --- --- --- --- 012536 00000 ------------ T 0.79 0.47 0.64 A 0.21 0.53 0.36 0000 --- --- --- --- 012550 00000 ------------ - 0.76 0.48 0.62 + 0.24 0.52 0.38 0000 --- --- --- --- 012561 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 012613 00000 ------------ G 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 012614 00000 ------------ A 0.82 0.48 0.64 G 0.17 0.52 0.36 0000 --- --- --- --- 012848 00000 ------------ C 0.65 0.48 0.57 G 0.35 0.52 0.43 0000 --- --- --- --- 013028 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013033 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013074 00000 ------------ T 0.95 0.83 0.89 C 0.05 0.17 0.11 0000 --- --- --- --- 013149 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 013168 00000 ------------ G 0.79 0.70 0.74 A 0.21 0.30 0.26 0000 --- --- --- --- 013179 00000 ------------ G 0.95 0.80 0.87 C 0.05 0.20 0.13 0000 --- --- --- --- 013247 00000 ------------ C 0.82 0.86 0.85 T 0.18 0.14 0.15 0000 --- --- --- --- 013253 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 013419 00000 ------------ A 0.91 0.82 0.86 G 0.09 0.17 0.14 0000 --- --- --- --- 013457 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 013510 00000 ------------ G 0.95 0.90 0.93 T 0.05 0.10 0.07 0000 --- --- --- --- 013570 00000 ------------ A 0.70 1.00 0.85 G 0.30 0.00 0.15 0000 --- --- --- --- 013588 00000 ------------ C 0.57 0.55 0.56 G 0.42 0.45 0.44 0000 --- --- --- --- 013615 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013633 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 013659 00000 ------------ G 0.75 0.43 0.59 C 0.25 0.57 0.41 0000 --- --- --- --- 013739 00579 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0077 GAA GGA GLU(E) GLY(G) 013773 00613 SYNON A 0.87 0.89 0.88 C 0.13 0.11 0.12 0088 CCA CCC PRO(P) PRO(P) 014619 00000 ------------ C 0.61 0.63 0.62 T 0.39 0.37 0.38 0000 --- --- --- --- 014888 00000 ------------ G 0.59 0.67 0.62 T 0.41 0.33 0.38 0000 --- --- --- --- 015037 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015086 00000 ------------ G 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 015150 00000 ------------ G 0.95 0.92 0.94 C 0.05 0.08 0.06 0000 --- --- --- --- 016270 00000 ------------ G 0.74 0.72 0.73 A 0.26 0.28 0.27 0000 --- --- --- --- 016348 00000 ------------ C 0.77 0.74 0.76 T 0.23 0.26 0.24 0000 --- --- --- --- 016407 00000 ------------ C 0.84 0.72 0.79 T 0.16 0.28 0.21 0000 --- --- --- --- 017438 00717 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0123 AGC ACC SER(S) THR(T) 017445 00724 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0125 GCG GCA ALA(A) ALA(A) 017514 00000 ------------ T 0.85 0.74 0.79 G 0.15 0.26 0.21 0000 --- --- --- --- 017536 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 017543 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 017577 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 017839 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 017918 00000 ------------ G 0.84 0.75 0.80 C 0.16 0.25 0.20 0000 --- --- --- --- 017993 00000 ------------ T 0.86 0.74 0.80 C 0.14 0.26 0.20 0000 --- --- --- --- 018000 00000 ------------ G 0.82 0.73 0.77 T 0.17 0.27 0.23 0000 --- --- --- --- 018009 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 018090 00000 ------------ T 0.90 0.74 0.81 C 0.10 0.26 0.19 0000 --- --- --- --- 018130 00000 ------------ G 0.95 0.87 0.91 A 0.05 0.13 0.09 0000 --- --- --- --- 018159 00000 ------------ C 0.86 0.74 0.80 G 0.14 0.26 0.20 0000 --- --- --- --- 018868 00000 ------------ T 0.80 0.74 0.77 C 0.20 0.26 0.23 0000 --- --- --- --- 018875 00000 ------------ T 0.81 0.75 0.78 A 0.19 0.25 0.22 0000 --- --- --- --- 018879 00000 ------------ T 0.84 0.88 0.86 C 0.16 0.12 0.14 0000 --- --- --- --- 018894 00000 ------------ A 0.81 0.71 0.76 G 0.19 0.29 0.24 0000 --- --- --- --- 018898 00000 ------------ T 0.82 0.78 0.79 C 0.18 0.23 0.21 0000 --- --- --- --- 018904 00000 ------------ - 0.81 0.82 0.81 + 0.19 0.18 0.19 0000 --- --- --- --- 019392 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 019461 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019467 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 019587 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019595 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 019623 00000 ------------ A 0.75 0.71 0.73 G 0.25 0.29 0.27 0000 --- --- --- --- 020925 00000 ------------ T 0.85 0.77 0.81 G 0.15 0.23 0.19 0000 --- --- --- --- 021095 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021463 00000 ------------ - 0.10 0.15 0.13 + 0.90 0.85 0.87 0000 --- --- --- --- 021677 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 022054 00000 ------------ C 0.46 0.67 0.57 A 0.54 0.33 0.43 0000 --- --- --- --- 022266 00000 ------------ G 0.85 0.77 0.82 A 0.15 0.23 0.18 0000 --- --- --- --- 022280 00000 ------------ A 0.85 0.77 0.82 G 0.15 0.23 0.18 0000 --- --- --- --- 022579 00000 ------------ - 0.02 0.02 0.02 + 0.98 0.98 0.98 0000 --- --- --- --- 022860 00000 ------------ T 0.78 0.93 0.87 C 0.22 0.07 0.13 0000 --- --- --- --- 022948 00000 ------------ A 0.59 0.70 0.66 G 0.41 0.30 0.34 0000 --- --- --- --- 023368 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023566 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023651 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 023859 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 023910 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 024471 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 027903 00000 ------------ T 0.63 0.52 0.58 C 0.37 0.48 0.42 0000 --- --- --- --- 027959 00000 ------------ G 0.62 0.52 0.58 A 0.38 0.48 0.42 0000 --- --- --- --- 028062 00000 ------------ - 0.48 0.50 0.49 + 0.52 0.50 0.51 0000 --- --- --- --- 028067 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028080 00000 ------------ G 0.62 0.50 0.56 A 0.38 0.50 0.44 0000 --- --- --- --- 028112 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 028173 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033400 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 033457 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033524 00000 ------------ G 0.59 0.45 0.52 A 0.41 0.55 0.48 0000 --- --- --- --- 033595 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 033620 00000 ------------ G 0.98 0.93 0.95 A 0.02 0.07 0.05 0000 --- --- --- --- 033621 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 033623 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 033664 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 033703 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 033742 00000 ------------ T 0.97 0.97 0.97 C 0.03 0.03 0.03 0000 --- --- --- --- 043702 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 043716 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 043753 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 043887 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 043921 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 044035 01316 NON-SYN G 0.94 0.89 0.91 C 0.06 0.11 0.09 0323 GTG CTG VAL(V) LEU(L) 044078 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 044209 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 044657 00000 ------------ G 0.50 0.86 0.67 C 0.50 0.14 0.33 0000 --- --- --- --- 044772 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044861 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 046161 00000 ------------ G 0.85 0.61 0.73 A 0.15 0.39 0.27 0000 --- --- --- --- 046204 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 046226 00000 ------------ C 0.82 0.61 0.71 T 0.18 0.39 0.29 0000 --- --- --- --- 046269 00000 ------------ G 0.85 0.61 0.73 T 0.15 0.39 0.27 0000 --- --- --- --- 046400 00000 ------------ T 0.81 0.85 0.83 C 0.19 0.15 0.17 0000 --- --- --- --- 046457 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 046528 00000 ------------ C 0.79 0.85 0.82 T 0.21 0.15 0.18 0000 --- --- --- --- 046551 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 047862 01599 3' UTR C 0.78 0.89 0.84 T 0.22 0.11 0.16 0000 --- --- --- --- 048974 00000 ------------ T 0.92 0.69 0.80 C 0.08 0.31 0.20 0000 --- --- --- --- 049105 00000 ------------ C 0.78 0.85 0.82 T 0.22 0.15 0.18 0000 --- --- --- --- 049759 00000 ------------ T 0.61 0.57 0.59 C 0.39 0.43 0.41 0000 --- --- --- --- 049785 00000 ------------ C 0.48 0.55 0.51 T 0.52 0.45 0.49 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006717: AACA 012312: A 012550: A 013149: A 013457: CTT 018904: CC 021463: TCCTAAA 022579: ATT 028062: ATTT 043753: CAGGTGGCCTG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000161 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000205 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000453 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001114 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001158 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 001202 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001437 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 001440 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001602 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001621 00000 ------------ G 0.91 0.90 0.91 A 0.09 0.10 0.09 0000 --- --- --- --- 001648 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001916 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 002128 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 002172 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 002243 00000 ------------ C 0.45 0.87 0.67 T 0.55 0.13 0.33 0000 --- --- --- --- 002954 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003814 00000 ------------ C 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 003855 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003900 00000 ------------ A 0.85 0.86 0.85 G 0.15 0.14 0.15 0000 --- --- --- --- 004063 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 004135 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 004171 00000 ------------ C 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 004204 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004230 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004299 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004404 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004488 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004587 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 004649 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 004682 00000 ------------ A 0.72 0.89 0.82 T 0.28 0.11 0.18 0000 --- --- --- --- 004773 00000 ------------ G 0.67 0.89 0.79 A 0.33 0.11 0.21 0000 --- --- --- --- 004874 00000 ------------ A 0.41 0.89 0.66 G 0.59 0.11 0.34 0000 --- --- --- --- 005510 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005593 00000 ------------ C 0.63 0.89 0.76 T 0.37 0.11 0.24 0000 --- --- --- --- 005658 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005826 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005836 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005997 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006359 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 006783 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 006835 00000 ------------ G 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 006931 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007112 00000 ------------ A 0.82 0.90 0.86 C 0.17 0.10 0.14 0000 --- --- --- --- 007280 00000 ------------ G 1.00 0.86 0.93 A 0.00 0.14 0.07 0000 --- --- --- --- 007505* 007679 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 007796 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 008805 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 008908 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009172 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009507 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009595 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 009632 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009652 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009738 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 010087 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010169 00000 ------------ C 0.85 0.91 0.88 T 0.15 0.09 0.12 0000 --- --- --- --- 010487 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010765 00000 ------------ C 0.97 1.00 0.98 T 0.03 0.00 0.02 0000 --- --- --- --- 010854 00000 ------------ C 0.97 1.00 0.98 T 0.03 0.00 0.02 0000 --- --- --- --- 010984 00000 ------------ - 0.31 0.03 0.19 + 0.69 0.97 0.81 0000 --- --- --- --- 011002 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 011006 00000 ------------ A 0.75 0.94 0.83 G 0.25 0.06 0.17 0000 --- --- --- --- 011014* 011021 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 011045 00000 ------------ C 0.84 1.00 0.91 T 0.16 0.00 0.09 0000 --- --- --- --- 011157 00000 ------------ T 0.75 1.00 0.88 C 0.25 0.00 0.12 0000 --- --- --- --- 011355 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 011393 00000 ------------ T 0.91 0.87 0.89 G 0.09 0.13 0.11 0000 --- --- --- --- 011446 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011903 00000 ------------ C 0.29 0.83 0.55 T 0.71 0.17 0.45 0000 --- --- --- --- 012459 00033 5' UTR C 0.62 0.83 0.72 T 0.38 0.17 0.28 0000 --- --- --- --- 012536 00110 SYNON A 0.90 1.00 0.95 G 0.10 0.00 0.05 0015 CTA CTG LEU(L) LEU(L) 013337 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 013475 00000 ------------ C 0.62 0.83 0.72 T 0.38 0.17 0.28 0000 --- --- --- --- 013510 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 014489 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014520 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 014537 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 014679 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014893 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014894 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 015508 00000 ------------ T 0.85 0.28 0.57 G 0.15 0.72 0.43 0000 --- --- --- --- 015533 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015589 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 015642 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015962 00000 ------------ C 0.91 0.26 0.59 G 0.09 0.74 0.41 0000 --- --- --- --- 016082 00000 ------------ G 0.85 0.91 0.88 C 0.15 0.09 0.12 0000 --- --- --- --- 016430 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016492 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016572 00000 ------------ G 0.69 0.82 0.75 A 0.31 0.18 0.25 0000 --- --- --- --- 016669 00000 ------------ G 0.69 0.84 0.76 C 0.31 0.16 0.24 0000 --- --- --- --- 016746 00000 ------------ A 0.76 0.89 0.83 C 0.24 0.11 0.17 0000 --- --- --- --- 016796 00000 ------------ - 0.28 0.18 0.23 + 0.72 0.82 0.77 0000 --- --- --- --- 016892 00000 ------------ A 0.29 0.80 0.54 G 0.71 0.20 0.46 0000 --- --- --- --- 017036 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017082 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017106 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017543 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017615 00000 ------------ G 0.35 0.80 0.57 A 0.65 0.20 0.43 0000 --- --- --- --- 017704 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017754 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017834 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018550 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 019010 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019090 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019178 00000 ------------ T 0.94 0.93 0.94 C 0.06 0.07 0.06 0000 --- --- --- --- 019337 00000 ------------ C 0.72 0.83 0.77 A 0.28 0.17 0.23 0000 --- --- --- --- 019376 00000 ------------ C 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 019775 00000 ------------ G 0.38 0.80 0.59 A 0.62 0.20 0.41 0000 --- --- --- --- 019776 00000 ------------ G 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 020535 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020574 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020712 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020727 00000 ------------ A 0.35 0.82 0.58 G 0.65 0.18 0.42 0000 --- --- --- --- 020915 00000 ------------ A 0.71 0.82 0.76 G 0.29 0.18 0.24 0000 --- --- --- --- 020952 00000 ------------ C 0.69 0.83 0.76 A 0.31 0.17 0.24 0000 --- --- --- --- 021766 00000 ------------ G 0.37 0.82 0.59 C 0.63 0.18 0.41 0000 --- --- --- --- 022004 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 022574 00000 ------------ A 0.35 0.74 0.54 G 0.65 0.26 0.46 0000 --- --- --- --- 022590 00000 ------------ A 0.29 0.72 0.50 G 0.71 0.28 0.50 0000 --- --- --- --- 022665 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002172: TGAA 004587: GTA 006783: CGC 010984: G 014537: T 015642: T 016796: AA 018550: ACTAAAGACACGCAGGCCGAGTC The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 011014 A 0.65 0.97 0.78 G 0.35 0.00 0.21 T 0.00 0.03 0.01 007505 A 0.00 0.11 0.05 C 0.98 0.89 0.93 T 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000239 00000 ------------ G 0.60 0.50 0.55 A 0.40 0.50 0.45 0000 --- --- --- --- 000580 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000845 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000890 00000 ------------ G 0.58 0.48 0.53 A 0.42 0.52 0.47 0000 --- --- --- --- 001454 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001596 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001673 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002265 00000 ------------ C 0.88 0.88 0.88 T 0.12 0.12 0.12 0000 --- --- --- --- 002371 00000 ------------ G 0.85 0.87 0.86 A 0.15 0.13 0.14 0000 --- --- --- --- 002438 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002487 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002490 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002517 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002740 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002782 00000 ------------ G 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 002820 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 002909 00000 ------------ C 0.87 0.87 0.87 T 0.13 0.13 0.13 0000 --- --- --- --- 003337 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003619 00000 ------------ C 0.83 0.87 0.85 A 0.17 0.13 0.15 0000 --- --- --- --- 003913 00000 ------------ C 0.80 0.86 0.83 T 0.20 0.14 0.17 0000 --- --- --- --- 004083 00000 ------------ G 0.66 0.45 0.56 C 0.34 0.55 0.44 0000 --- --- --- --- 004395 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 004503 00000 ------------ T 0.81 0.87 0.84 C 0.19 0.13 0.16 0000 --- --- --- --- 004557 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004560 00000 ------------ C 0.62 0.46 0.53 G 0.38 0.54 0.47 0000 --- --- --- --- 004606 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004841 00000 ------------ G 0.82 0.86 0.84 T 0.18 0.14 0.16 0000 --- --- --- --- 004905 00000 ------------ A 0.76 0.86 0.81 G 0.24 0.14 0.19 0000 --- --- --- --- 004918 00000 ------------ G 0.65 0.66 0.66 A 0.35 0.34 0.34 0000 --- --- --- --- 004986 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005758 -----** NON-SYN G 0.60 0.45 0.52 A 0.40 0.55 0.48 0075 GTC ATC VAL(V) ILE(I) 005914 00000 ------------ C 0.70 0.61 0.65 T 0.30 0.39 0.35 0000 --- --- --- --- 005953 00000 ------------ C 0.63 0.61 0.62 T 0.37 0.39 0.38 0000 --- --- --- --- 006162 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006222 00000 ------------ T 0.56 0.59 0.58 G 0.44 0.41 0.42 0000 --- --- --- --- 006235* 006244 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006296 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006447 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 006568 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006619 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 006663 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 006834 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007086 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007339 00000 ------------ G 0.96 0.95 0.95 A 0.04 0.05 0.05 0000 --- --- --- --- 007482 -----** SYNON C 0.96 0.93 0.94 T 0.04 0.07 0.06 0167 AAC AAT ASN(N) ASN(N) 007595 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007613 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007653 00000 ------------ C 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 007685 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007687 00000 ------------ C 0.71 0.54 0.63 T 0.29 0.46 0.37 0000 --- --- --- --- 007745 00000 ------------ G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 007758 00000 ------------ A 0.52 0.48 0.50 G 0.48 0.52 0.50 0000 --- --- --- --- 007906 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 008199 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008293 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008318 00000 ------------ C 0.63 0.52 0.58 T 0.37 0.48 0.42 0000 --- --- --- --- 008414 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008443 00000 ------------ G 0.78 0.93 0.86 A 0.22 0.07 0.14 0000 --- --- --- --- 008503 00000 ------------ G 0.71 0.59 0.65 A 0.29 0.41 0.35 0000 --- --- --- --- 008576 00000 ------------ C 0.52 0.52 0.52 A 0.48 0.48 0.48 0000 --- --- --- --- 008616 00000 ------------ T 0.50 0.52 0.51 A 0.50 0.48 0.49 0000 --- --- --- --- 008749 00000 ------------ G 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 008851 00000 ------------ G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 009130 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009399 00000 ------------ G 0.54 0.48 0.51 A 0.46 0.52 0.49 0000 --- --- --- --- 009596 00000 ------------ G 0.96 0.85 0.90 A 0.04 0.15 0.10 0000 --- --- --- --- 009640 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009787 00000 ------------ - 0.04 0.07 0.05 + 0.96 0.93 0.95 0000 --- --- --- --- 010182 00000 ------------ G 0.50 0.57 0.53 A 0.50 0.43 0.47 0000 --- --- --- --- 010183 00000 ------------ C 0.50 0.57 0.53 T 0.50 0.43 0.47 0000 --- --- --- --- 010411 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 010487 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 010607 00000 ------------ A 0.95 0.98 0.96 G 0.05 0.02 0.04 0000 --- --- --- --- 010644 00000 ------------ - 0.93 1.00 0.96 + 0.07 0.00 0.04 0000 --- --- --- --- 010725 00000 ------------ A 0.63 0.52 0.57 C 0.37 0.48 0.43 0000 --- --- --- --- 010871 00000 ------------ C 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 010895 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 010920 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 011135 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011351 00000 ------------ C 0.88 0.95 0.92 T 0.12 0.05 0.08 0000 --- --- --- --- 012007 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012091 00000 ------------ G 0.96 0.93 0.94 C 0.04 0.07 0.06 0000 --- --- --- --- 012408 00000 ------------ C 0.67 0.48 0.57 T 0.33 0.52 0.43 0000 --- --- --- --- 012598 00000 ------------ G 0.95 0.93 0.94 A 0.05 0.07 0.06 0000 --- --- --- --- 012604 00000 ------------ G 0.95 0.93 0.94 A 0.05 0.07 0.06 0000 --- --- --- --- 012787 00000 ------------ T 0.98 0.95 0.96 C 0.02 0.05 0.04 0000 --- --- --- --- 012822 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 012951 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013060 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013168 00000 ------------ G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 013243 00000 ------------ C 0.83 0.91 0.87 G 0.17 0.09 0.13 0000 --- --- --- --- 013291 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013715 00000 ------------ C 0.77 0.57 0.67 T 0.23 0.43 0.33 0000 --- --- --- --- 013757 00000 ------------ C 0.58 0.84 0.71 A 0.42 0.16 0.29 0000 --- --- --- --- 013790 00000 ------------ A 0.62 0.91 0.76 G 0.38 0.09 0.24 0000 --- --- --- --- 013810 00000 ------------ C 0.77 0.57 0.67 T 0.23 0.43 0.33 0000 --- --- --- --- 013902 00000 ------------ A 0.62 0.91 0.77 G 0.38 0.09 0.23 0000 --- --- --- --- 013912 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013995 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014029 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014129 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 014239 00000 ------------ - 0.96 0.93 0.95 + 0.04 0.07 0.05 0000 --- --- --- --- 014368 00000 ------------ G 0.71 0.57 0.64 A 0.29 0.43 0.36 0000 --- --- --- --- 014480 00000 ------------ C 0.83 0.91 0.87 G 0.17 0.09 0.13 0000 --- --- --- --- 014639 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 014680 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 015015 00000 ------------ C 0.71 0.57 0.64 G 0.29 0.43 0.36 0000 --- --- --- --- 015030 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 015176 00000 ------------ A 0.77 0.59 0.68 G 0.23 0.41 0.32 0000 --- --- --- --- 015234 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015242 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015244 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015389 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015592 00000 ------------ G 0.84 0.93 0.88 A 0.16 0.07 0.12 0000 --- --- --- --- 015688 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 015708 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015858 00000 ------------ T 0.93 0.91 0.92 C 0.07 0.09 0.08 0000 --- --- --- --- 015960 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016061 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 016124 00000 ------------ A 0.64 0.84 0.74 G 0.36 0.16 0.26 0000 --- --- --- --- 016431 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 016544 00000 ------------ T 0.95 0.95 0.95 C 0.05 0.05 0.05 0000 --- --- --- --- 016656 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016788 -----** SYNON C 0.94 1.00 0.97 G 0.06 0.00 0.03 0256 ACC ACG THR(T) THR(T) 017088 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017134 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017135 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017296 00000 ------------ G 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 017298 00000 ------------ - 0.17 0.00 0.08 + 0.83 1.00 0.92 0000 --- --- --- --- 017387 00000 ------------ G 0.64 0.83 0.74 C 0.36 0.17 0.26 0000 --- --- --- --- 017399 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017424 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 017468 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017533 00000 ------------ A 0.65 0.83 0.74 G 0.35 0.17 0.26 0000 --- --- --- --- 017560 00000 ------------ T 0.74 0.91 0.83 C 0.26 0.09 0.17 0000 --- --- --- --- 017659 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 018306 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018351 00000 ------------ T 0.45 0.83 0.65 A 0.55 0.17 0.35 0000 --- --- --- --- 018394 00000 ------------ A 0.43 0.83 0.64 G 0.57 0.17 0.36 0000 --- --- --- --- 018665 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 019053 00000 ------------ G 0.72 0.91 0.81 A 0.28 0.09 0.19 0000 --- --- --- --- 019056 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019063 00000 ------------ G 0.48 0.91 0.69 A 0.52 0.09 0.31 0000 --- --- --- --- 019170 00000 ------------ G 0.87 0.79 0.83 A 0.13 0.21 0.17 0000 --- --- --- --- 019300 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020015 00000 ------------ G 0.76 0.91 0.83 A 0.24 0.09 0.17 0000 --- --- --- --- 020497 00000 ------------ - 0.46 0.82 0.63 + 0.54 0.18 0.37 0000 --- --- --- --- 020719 00000 ------------ T 0.46 0.83 0.64 C 0.54 0.17 0.36 0000 --- --- --- --- 020809 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020958 00000 ------------ G 0.72 0.65 0.69 A 0.28 0.35 0.31 0000 --- --- --- --- 020981 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020985 00000 ------------ C 0.73 0.91 0.82 T 0.27 0.09 0.18 0000 --- --- --- --- 021100 00000 ------------ T 0.48 0.90 0.68 C 0.52 0.10 0.32 0000 --- --- --- --- 021132 00000 ------------ A 0.43 0.80 0.61 G 0.57 0.20 0.39 0000 --- --- --- --- 021144 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021145 00000 ------------ C 0.48 0.91 0.69 T 0.52 0.09 0.31 0000 --- --- --- --- 021510 00000 ------------ G 0.62 0.91 0.76 A 0.38 0.09 0.24 0000 --- --- --- --- 021877 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 021956 00000 ------------ G 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 022084 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 022211 00000 ------------ T 0.93 0.91 0.92 G 0.07 0.09 0.08 0000 --- --- --- --- 022652 00000 ------------ - 0.00 0.09 0.04 + 1.00 0.91 0.96 0000 --- --- --- --- 022690 00000 ------------ G 0.67 0.91 0.79 A 0.33 0.09 0.21 0000 --- --- --- --- 022738 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022825 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 022889 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023026 00000 ------------ A 0.84 1.00 0.92 C 0.16 0.00 0.08 0000 --- --- --- --- 023117 00000 ------------ C 0.50 0.76 0.63 A 0.50 0.24 0.37 0000 --- --- --- --- 023171 -----** SYNON T 1.00 0.95 0.98 C 0.00 0.05 0.02 0313 TTT TTC PHE(F) PHE(F) 023431 -----** NON-SYN A 0.52 0.87 0.70 C 0.48 0.13 0.30 0400 GAG GCG GLU(E) ALA(A) 023474 -----** SYNON G 0.52 0.87 0.70 T 0.48 0.13 0.30 0414 CTG CTT LEU(L) LEU(L) 023523 -----** NON-SYN T 0.91 0.87 0.89 C 0.09 0.13 0.11 0431 TGC CGC CYS(C) ARG(R) 023525 -----** SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0431 TGC TGT CYS(C) CYS(C) 023531 -----** SYNON T 0.50 0.87 0.69 C 0.50 0.13 0.31 0433 CTT CTC LEU(L) LEU(L) 023539 -----** NON-SYN C 1.00 0.91 0.96 T 0.00 0.09 0.04 0436 TCG TTG SER(S) LEU(L) 023739 -----** NON-SYN T 0.69 0.80 0.74 C 0.31 0.20 0.26 0503 TCC CCC SER(S) PRO(P) 023959 -----** NON-SYN A 0.43 0.70 0.57 G 0.57 0.30 0.43 0576 CAG CGG GLN(Q) ARG(R) 023967 -----** NON-SYN G 0.89 1.00 0.94 A 0.11 0.00 0.06 0579 GTA ATA VAL(V) ILE(I) 024255 -----** NON-SYN C 0.98 0.98 0.98 T 0.02 0.02 0.02 0675 CCA TCA PRO(P) SER(S) 024486 -----** NON-SYN T 0.81 0.91 0.86 G 0.19 0.09 0.14 0752 TCC GCC SER(S) ALA(A) 024629 -----** SYNON T 0.89 1.00 0.94 C 0.11 0.00 0.06 0799 CCT CCC PRO(P) PRO(P) 024716 -----** 3' UTR T 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 024718 -----** 3' UTR T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 024759 -----** 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024798 -----** 3' UTR C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 024982 -----** 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024992 -----** 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025101 -----** 3' UTR G 0.71 0.52 0.62 A 0.29 0.48 0.38 0000 --- --- --- --- 025346 -----** 3' UTR A 0.70 0.52 0.61 G 0.30 0.48 0.39 0000 --- --- --- --- 025448 -----** 3' UTR C 0.66 0.91 0.79 T 0.34 0.09 0.21 0000 --- --- --- --- 025776 00000 ------------ A 0.76 0.48 0.61 G 0.24 0.52 0.39 0000 --- --- --- --- 026042 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 026196 00000 ------------ A 0.78 0.62 0.70 G 0.23 0.38 0.30 0000 --- --- --- --- 026457 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 026469 00000 ------------ C 0.71 0.48 0.60 T 0.29 0.52 0.40 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 009787: A 010644: GTT 014239: ATAAA 017298: A 018665: GA 020497: GTG 022652: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 006235 A 0.04 0.00 0.02 G 0.96 0.98 0.97 T 0.00 0.02 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000122 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 000447 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000593 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000658 00000 ------------ A 0.68 1.00 0.84 G 0.32 0.00 0.16 0000 --- --- --- --- 000660 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000929 00000 ------------ T 0.83 0.25 0.55 C 0.17 0.75 0.45 0000 --- --- --- --- 000961 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001062 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001835 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001963 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002248 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 002297 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002718 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 003146 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003321 00428 SYNON C 0.89 1.00 0.94 A 0.11 0.00 0.06 0128 ACC ACA THR(T) THR(T) 004421 00000 ------------ + 0.74 1.00 0.88 - 0.26 0.00 0.12 0000 --- --- --- --- 004752 00000 ------------ G 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 004938 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004421: AGTAACAATATTCAGCTATATTA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000071 00000 ------------ T 0.88 0.85 0.86 C 0.12 0.15 0.14 0000 --- --- --- --- 000154 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000165 00000 ------------ G 0.97 0.98 0.98 A 0.03 0.02 0.02 0000 --- --- --- --- 000166 00000 ------------ T 0.90 0.96 0.93 C 0.10 0.04 0.07 0000 --- --- --- --- 000175 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000235 00000 ------------ T 1.00 0.85 0.92 C 0.00 0.15 0.08 0000 --- --- --- --- 000254 00000 ------------ C 0.95 0.89 0.92 G 0.05 0.11 0.08 0000 --- --- --- --- 000324 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000347 00000 ------------ C 0.54 0.46 0.50 T 0.46 0.54 0.50 0000 --- --- --- --- 000348 00000 ------------ G 0.76 0.96 0.86 A 0.24 0.04 0.14 0000 --- --- --- --- 000427 00000 ------------ G 0.72 0.96 0.84 A 0.28 0.04 0.16 0000 --- --- --- --- 000492 00000 ------------ C 0.80 0.61 0.70 T 0.20 0.39 0.30 0000 --- --- --- --- 000543 00000 ------------ G 0.79 0.59 0.68 A 0.21 0.41 0.32 0000 --- --- --- --- 000617 00000 ------------ C 0.68 0.98 0.83 T 0.33 0.02 0.17 0000 --- --- --- --- 000686 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000743 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000756 00000 ------------ C 0.91 0.76 0.84 A 0.09 0.24 0.16 0000 --- --- --- --- 000790 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000845 00000 ------------ T 0.89 0.88 0.89 C 0.11 0.12 0.11 0000 --- --- --- --- 001025 00000 ------------ G 0.64 0.55 0.59 A 0.36 0.45 0.41 0000 --- --- --- --- 001197 00000 ------------ C 0.93 0.87 0.90 T 0.07 0.13 0.10 0000 --- --- --- --- 001302 00000 ------------ T 0.91 0.79 0.86 C 0.09 0.21 0.14 0000 --- --- --- --- 001311 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 001451 00000 ------------ C 0.85 0.75 0.80 G 0.15 0.25 0.20 0000 --- --- --- --- 001495 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001688 00034 5' UTR A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001927 00273 5' UTR G 0.92 0.72 0.82 A 0.08 0.28 0.18 0000 --- --- --- --- 001969 00315 5' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001999 00345 5' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002012 00358 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002018 00364 5' UTR C 0.75 0.76 0.76 T 0.25 0.24 0.24 0000 --- --- --- --- 002340 00000 ------------ T 0.70 0.62 0.67 C 0.30 0.38 0.33 0000 --- --- --- --- 002393 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002861 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003083 00000 ------------ G 0.79 0.72 0.76 A 0.21 0.28 0.24 0000 --- --- --- --- 003113 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 003156 00000 ------------ T 0.67 0.72 0.69 C 0.33 0.28 0.31 0000 --- --- --- --- 003167 00000 ------------ T 0.65 0.61 0.63 C 0.35 0.39 0.37 0000 --- --- --- --- 003262 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003264 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003345 00438 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003419 00512 5' UTR T 0.77 0.85 0.81 C 0.23 0.15 0.19 0000 --- --- --- --- 003484 00000 ------------ A 0.71 0.65 0.68 G 0.29 0.35 0.32 0000 --- --- --- --- 003664 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 003668 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003698 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 003763 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003895 00000 ------------ T 0.75 0.74 0.74 C 0.25 0.26 0.26 0000 --- --- --- --- 003973 00000 ------------ T 0.87 0.83 0.85 G 0.13 0.17 0.15 0000 --- --- --- --- 004001 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004096 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004118 00000 ------------ A 0.71 0.72 0.71 G 0.29 0.28 0.29 0000 --- --- --- --- 004183 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004304 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004312 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004371 00000 ------------ - 0.17 0.24 0.20 + 0.83 0.76 0.80 0000 --- --- --- --- 004483 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004604 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004978 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005122 00000 ------------ - 0.15 0.17 0.16 + 0.85 0.83 0.84 0000 --- --- --- --- 005125 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005232 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 005237 00000 ------------ A 0.67 0.52 0.60 G 0.33 0.48 0.40 0000 --- --- --- --- 005450 00000 ------------ T 0.88 0.82 0.85 G 0.12 0.18 0.15 0000 --- --- --- --- 005508 00000 ------------ A 0.82 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 005714 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005948 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005993 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006008 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006019 00000 ------------ G 0.77 0.77 0.77 A 0.23 0.23 0.23 0000 --- --- --- --- 006499 00570 5' UTR T 0.67 0.80 0.73 C 0.33 0.20 0.27 0000 --- --- --- --- 006549 00000 ------------ - 0.08 0.22 0.15 + 0.92 0.78 0.85 0000 --- --- --- --- 006708 00000 ------------ T 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 006726 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007420 00000 ------------ - 0.07 0.20 0.13 + 0.93 0.80 0.87 0000 --- --- --- --- 007671 00000 ------------ A 0.94 0.76 0.85 G 0.06 0.24 0.15 0000 --- --- --- --- 007683 00000 ------------ G 0.81 0.72 0.77 T 0.19 0.28 0.23 0000 --- --- --- --- 008327 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 008588 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008765 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008789 00000 ------------ C 0.90 0.89 0.90 T 0.10 0.11 0.10 0000 --- --- --- --- 009179 00000 ------------ T 0.97 0.87 0.92 C 0.03 0.13 0.08 0000 --- --- --- --- 009430 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 009452 00000 ------------ T 0.89 0.75 0.82 A 0.11 0.25 0.18 0000 --- --- --- --- 010431 00000 ------------ G 0.92 0.74 0.83 C 0.08 0.26 0.17 0000 --- --- --- --- 010534* 011195 00000 ------------ G 0.63 0.48 0.55 T 0.37 0.52 0.45 0000 --- --- --- --- 011275 00000 ------------ G 0.64 0.48 0.56 A 0.36 0.52 0.44 0000 --- --- --- --- 012865 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012914 00000 ------------ A 0.90 0.70 0.80 T 0.10 0.30 0.20 0000 --- --- --- --- 013026 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 013033 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 013081 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013089 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013182 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 013302 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013359 00000 ------------ A 0.44 0.70 0.56 G 0.56 0.30 0.44 0000 --- --- --- --- 013409 00000 ------------ G 0.92 0.80 0.86 C 0.08 0.20 0.14 0000 --- --- --- --- 013415 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013690 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013742 01002 NON-SYN A 0.59 0.64 0.61 G 0.41 0.36 0.39 0129 ATT GTT ILE(I) VAL(V) 014236 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014316 00000 ------------ T 0.90 0.75 0.83 G 0.10 0.25 0.17 0000 --- --- --- --- 014380 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 014530 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014551 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014642 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 014643 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014687 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014767 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014858 00000 ------------ C 0.65 0.61 0.63 T 0.35 0.39 0.37 0000 --- --- --- --- 014970 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 015154 00000 ------------ T 0.80 1.00 0.91 C 0.20 0.00 0.09 0000 --- --- --- --- 015282 00000 ------------ G 0.88 0.76 0.81 A 0.12 0.24 0.19 0000 --- --- --- --- 015423 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015461 00000 ------------ A 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 015614 00000 ------------ C 0.79 0.98 0.88 G 0.21 0.02 0.12 0000 --- --- --- --- 015917 00000 ------------ C 0.76 0.60 0.69 T 0.24 0.40 0.31 0000 --- --- --- --- 015937 00000 ------------ T 0.91 0.72 0.83 A 0.09 0.28 0.17 0000 --- --- --- --- 015971 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 016297 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016386 00000 ------------ A 0.96 0.85 0.90 T 0.04 0.15 0.10 0000 --- --- --- --- 016646 01402 NON-SYN T 0.98 1.00 0.99 C 0.02 0.00 0.01 0262 GTG GCG VAL(V) ALA(A) 016895 00000 ------------ T 0.61 0.61 0.61 C 0.39 0.39 0.39 0000 --- --- --- --- 016998 00000 ------------ C 0.76 0.46 0.61 G 0.24 0.54 0.39 0000 --- --- --- --- 016999 00000 ------------ A 0.67 0.39 0.53 G 0.33 0.61 0.47 0000 --- --- --- --- 017060 00000 ------------ C 0.93 0.70 0.82 G 0.07 0.30 0.18 0000 --- --- --- --- 017172 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 017219 00000 ------------ A 0.93 0.70 0.82 G 0.07 0.30 0.18 0000 --- --- --- --- 017882 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 018194 00000 ------------ T 0.94 0.82 0.88 C 0.06 0.18 0.12 0000 --- --- --- --- 018334 00000 ------------ T 0.93 0.70 0.82 C 0.07 0.30 0.18 0000 --- --- --- --- 018340 00000 ------------ G 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 018442 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018531 00000 ------------ C 0.60 0.59 0.60 T 0.40 0.41 0.40 0000 --- --- --- --- 018570 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018594 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 018603 00000 ------------ C 0.52 0.66 0.59 G 0.48 0.34 0.41 0000 --- --- --- --- 018847 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018908 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018922 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019060 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019201 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019275 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019496 00000 ------------ C 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 019754 01574 SYNON A 0.93 1.00 0.97 G 0.07 0.00 0.03 0319 GCA GCG ALA(A) ALA(A) 019759 01579 FRAME SHIFT - 0.00 0.02 0.01 + 1.00 0.98 0.99 0321 C-- CTC --- --- 019803 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 019908 00000 ------------ C 0.93 0.67 0.80 T 0.07 0.33 0.20 0000 --- --- --- --- 020115 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 020339 00000 ------------ T 0.96 0.95 0.96 C 0.04 0.05 0.04 0000 --- --- --- --- 020405 00000 ------------ A 0.72 0.64 0.68 G 0.28 0.36 0.32 0000 --- --- --- --- 020423 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020438 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020476 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020557 00000 ------------ C 0.87 0.73 0.80 T 0.13 0.27 0.20 0000 --- --- --- --- 020693 00000 ------------ C 0.85 0.84 0.85 T 0.15 0.16 0.15 0000 --- --- --- --- 020945 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021164 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 021170 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021230 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 021240 00000 ------------ C 0.77 0.65 0.71 T 0.23 0.35 0.29 0000 --- --- --- --- 021353 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021355 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021374 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021388 00000 ------------ A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 021396 00000 ------------ A 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 022040 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022112 00000 ------------ C 0.96 0.85 0.90 T 0.04 0.15 0.10 0000 --- --- --- --- 022320 00000 ------------ C 0.57 0.72 0.64 G 0.43 0.28 0.36 0000 --- --- --- --- 022409 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 022555 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023022 00000 ------------ C 0.80 1.00 0.91 G 0.20 0.00 0.09 0000 --- --- --- --- 023036 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023054 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 023058 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 023453 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023478 00000 ------------ A 0.94 0.76 0.85 T 0.06 0.24 0.15 0000 --- --- --- --- 023545 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023723 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023831 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 023889 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023922 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024036 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024067 00000 ------------ A 0.81 0.87 0.84 G 0.19 0.13 0.16 0000 --- --- --- --- 024350 00000 ------------ C 0.58 0.70 0.64 A 0.42 0.30 0.36 0000 --- --- --- --- 024461 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024465 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024466 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024479 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 024773 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 024995 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 025023 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 025236 00000 ------------ G 0.66 0.75 0.70 T 0.34 0.25 0.30 0000 --- --- --- --- 025720 00000 ------------ G 0.91 0.96 0.93 T 0.09 0.04 0.07 0000 --- --- --- --- 025727 00000 ------------ A 0.87 0.61 0.74 T 0.13 0.39 0.26 0000 --- --- --- --- 025972 00000 ------------ A 0.80 0.67 0.74 C 0.20 0.33 0.26 0000 --- --- --- --- 026039 00000 ------------ C 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 026183 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 026220 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 026374 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026423 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026533 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026580 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 026658 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026929 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 026975 00000 ------------ G 0.90 0.76 0.83 C 0.10 0.24 0.17 0000 --- --- --- --- 027068 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 027652 00000 ------------ A 0.90 0.76 0.83 G 0.10 0.24 0.17 0000 --- --- --- --- 027806 00000 ------------ T 0.75 0.87 0.81 A 0.25 0.13 0.19 0000 --- --- --- --- 028242 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 028250 00000 ------------ T 0.67 0.52 0.60 C 0.33 0.48 0.40 0000 --- --- --- --- 028261 00000 ------------ C 0.78 1.00 0.89 A 0.22 0.00 0.11 0000 --- --- --- --- 028300 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 028365 00000 ------------ T 0.63 0.74 0.68 C 0.37 0.26 0.32 0000 --- --- --- --- 028506 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 028589 00000 ------------ C 0.54 0.50 0.52 T 0.46 0.50 0.48 0000 --- --- --- --- 028697 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029010 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029129 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029202 00000 ------------ T 0.59 0.48 0.53 G 0.41 0.52 0.47 0000 --- --- --- --- 029265 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029325 00000 ------------ C 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 029520 00000 ------------ A 0.89 0.85 0.87 G 0.11 0.15 0.13 0000 --- --- --- --- 030326 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 030376 00000 ------------ T 0.57 0.70 0.65 C 0.43 0.30 0.35 0000 --- --- --- --- 030657 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 031006 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 031007 00000 ------------ A 0.89 0.84 0.86 C 0.11 0.16 0.14 0000 --- --- --- --- 031124 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 031146 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 031389 00000 ------------ C 0.90 0.98 0.94 T 0.10 0.02 0.06 0000 --- --- --- --- 031552 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 031718 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031845 00000 ------------ C 0.88 0.84 0.86 T 0.12 0.16 0.14 0000 --- --- --- --- 031854 00000 ------------ G 0.47 0.64 0.56 A 0.53 0.36 0.44 0000 --- --- --- --- 031967 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 032030 00000 ------------ G 0.72 0.68 0.70 A 0.28 0.32 0.30 0000 --- --- --- --- 032090 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 032188 00000 ------------ A 0.88 0.86 0.87 T 0.12 0.14 0.13 0000 --- --- --- --- 032260 00000 ------------ C 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 032300 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 032737 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 033131 00000 ------------ C 0.89 0.84 0.87 A 0.11 0.16 0.13 0000 --- --- --- --- 033160 00000 ------------ A 0.50 0.82 0.67 C 0.50 0.18 0.33 0000 --- --- --- --- 033337 00000 ------------ G 0.77 0.52 0.65 T 0.23 0.48 0.35 0000 --- --- --- --- 033362 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033382 00000 ------------ G 0.94 0.70 0.82 A 0.06 0.30 0.18 0000 --- --- --- --- 034496 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 035204 00000 ------------ T 0.67 0.50 0.59 C 0.33 0.50 0.41 0000 --- --- --- --- 035354 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035560 00000 ------------ C 0.92 0.66 0.79 A 0.08 0.34 0.21 0000 --- --- --- --- 035691 00000 ------------ - 0.60 0.52 0.57 + 0.40 0.48 0.43 0000 --- --- --- --- 035750 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035947 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 036002 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 036181 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 036204 00000 ------------ T 0.81 0.39 0.61 C 0.19 0.61 0.39 0000 --- --- --- --- 037264 00000 ------------ C 0.93 0.70 0.81 T 0.07 0.30 0.19 0000 --- --- --- --- 037564 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 037642 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 037852 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 037968 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038064 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 038188 00000 ------------ G 0.73 0.74 0.73 T 0.27 0.26 0.27 0000 --- --- --- --- 038224 00000 ------------ A 0.54 0.50 0.52 G 0.46 0.50 0.48 0000 --- --- --- --- 038572 00000 ------------ T 0.85 0.72 0.79 G 0.15 0.28 0.21 0000 --- --- --- --- 039198 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 039631 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039660 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039750 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 039871 00000 ------------ C 0.86 0.48 0.66 G 0.14 0.52 0.34 0000 --- --- --- --- 040520 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 040578 00000 ------------ A 0.57 0.74 0.65 G 0.43 0.26 0.35 0000 --- --- --- --- 040620 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040837 00000 ------------ C 0.93 0.70 0.82 T 0.07 0.30 0.18 0000 --- --- --- --- 040900 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 041137 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 041227 00000 ------------ G 0.74 0.81 0.78 T 0.26 0.19 0.22 0000 --- --- --- --- 042161 02248 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042231 02318 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042244 02331 3' UTR C 0.52 0.48 0.50 T 0.48 0.52 0.50 0000 --- --- --- --- 042266 02353 3' UTR G 0.93 0.72 0.83 A 0.07 0.28 0.17 0000 --- --- --- --- 042426 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 042620 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 042655 00000 ------------ C 0.97 0.85 0.91 T 0.03 0.15 0.09 0000 --- --- --- --- 042885 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004371: ACAA 005122: TA 006549: GTT 007420: GGCCCCATGACCAAACGTTAAGAAA 019759: TCTGGAGTGAGTGGAGCCAACCTATTTATGTGGG 024773: T 031967: CTTTT 035691: CA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 010534 A 0.00 0.12 0.06 G 0.92 0.62 0.78 T 0.08 0.26 0.17 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000095 00000 ------------ T 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 000205 00000 ------------ + 0.98 0.54 0.77 - 0.02 0.46 0.23 0000 --- --- --- --- 000276 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000321 00000 ------------ G 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 000657 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 001086 00000 ------------ G 1.00 0.53 0.76 A 0.00 0.47 0.24 0000 --- --- --- --- 001111 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 001494 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001510 00000 ------------ G 1.00 0.50 0.76 C 0.00 0.50 0.24 0000 --- --- --- --- 001699 00015 5' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002002 00156 NON-SYN C 0.96 1.00 0.98 T 0.04 0.00 0.02 0032 CCA TCA PRO(P) SER(S) 002187 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002190 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002298 00000 ------------ G 0.98 0.50 0.74 A 0.02 0.50 0.26 0000 --- --- --- --- 002529 00000 ------------ T 0.98 0.50 0.74 C 0.02 0.50 0.26 0000 --- --- --- --- 002693 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002736 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002773 00000 ------------ G 0.98 0.50 0.74 C 0.02 0.50 0.26 0000 --- --- --- --- 002883 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002892 00000 ------------ A 0.89 0.96 0.92 G 0.11 0.04 0.08 0000 --- --- --- --- 002989 00000 ------------ A 0.91 0.50 0.71 C 0.09 0.50 0.29 0000 --- --- --- --- 003084 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003114 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003344 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 003360 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003437 00000 ------------ C 0.83 0.63 0.73 G 0.17 0.37 0.27 0000 --- --- --- --- 003572 00000 ------------ G 0.59 0.43 0.51 T 0.41 0.57 0.49 0000 --- --- --- --- 003608 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 004175 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 004638 00000 ------------ G 0.69 0.93 0.81 C 0.31 0.07 0.19 0000 --- --- --- --- 004859 00000 ------------ G 0.80 0.93 0.86 A 0.20 0.07 0.14 0000 --- --- --- --- 004875 00000 ------------ C 0.66 0.98 0.81 A 0.34 0.02 0.19 0000 --- --- --- --- 005014 00000 ------------ A 0.61 0.45 0.53 G 0.39 0.55 0.47 0000 --- --- --- --- 005047 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005227 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005473 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005602 00000 ------------ A 0.93 0.92 0.92 T 0.07 0.08 0.08 0000 --- --- --- --- 005903 00547 NON-SYN A 1.00 0.96 0.98 T 0.00 0.04 0.02 0162 GAT GTT ASP(D) VAL(V) 006021 00665 SYNON C 0.79 0.93 0.86 T 0.21 0.07 0.14 0201 TTC TTT PHE(F) PHE(F) 006094 00738 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006169 00813 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006519 00000 ------------ C 1.00 0.95 0.97 T 0.00 0.05 0.03 0000 --- --- --- --- 007125 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007150 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007296 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007480 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007489 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 007592 00000 ------------ G 0.82 0.71 0.76 A 0.18 0.29 0.24 0000 --- --- --- --- 007659 00000 ------------ + 0.28 0.07 0.17 - 0.72 0.93 0.83 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000205: C 000657: A 007659: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000221 00000 ------------ C 0.93 0.72 0.81 G 0.07 0.28 0.19 0000 --- --- --- --- 000312 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000367 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 000542 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 000953 00000 ------------ G 0.90 0.90 0.90 T 0.10 0.10 0.10 0000 --- --- --- --- 001036 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 001516 00000 ------------ A 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 001533 00000 ------------ T 0.65 0.70 0.67 C 0.35 0.30 0.33 0000 --- --- --- --- 001588 00000 ------------ A 0.90 0.75 0.83 G 0.10 0.25 0.17 0000 --- --- --- --- 001604 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 002135 00000 ------------ C 0.90 0.76 0.83 G 0.10 0.24 0.17 0000 --- --- --- --- 002165 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 002193 00000 ------------ G 0.91 0.76 0.84 C 0.09 0.24 0.16 0000 --- --- --- --- 002220 00000 ------------ G 0.91 0.76 0.84 A 0.09 0.24 0.16 0000 --- --- --- --- 002267 00000 ------------ - 0.06 0.11 0.09 + 0.94 0.89 0.91 0000 --- --- --- --- 002425 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002548 00000 ------------ - 0.50 0.62 0.56 + 0.50 0.38 0.44 0000 --- --- --- --- 002668 00000 ------------ A 0.77 0.64 0.71 G 0.23 0.36 0.29 0000 --- --- --- --- 002814 00000 ------------ A 0.77 0.64 0.71 C 0.23 0.36 0.29 0000 --- --- --- --- 002937 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003259 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 003288 00000 ------------ A 0.95 0.87 0.91 G 0.05 0.13 0.09 0000 --- --- --- --- 003307 00000 ------------ T 0.95 0.87 0.91 G 0.05 0.13 0.09 0000 --- --- --- --- 003685 00000 ------------ G 0.89 0.76 0.82 A 0.11 0.24 0.18 0000 --- --- --- --- 003966 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 003975 00000 ------------ C 0.62 0.70 0.66 G 0.38 0.30 0.34 0000 --- --- --- --- 004561 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004827 00000 ------------ G 0.96 0.95 0.95 T 0.04 0.05 0.05 0000 --- --- --- --- 004889 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005025 00000 ------------ - 0.10 0.24 0.17 + 0.90 0.76 0.83 0000 --- --- --- --- 005130 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005602 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 005732 00000 ------------ T 0.90 0.89 0.89 C 0.10 0.11 0.11 0000 --- --- --- --- 005968 00221 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0044 AGC AGT SER(S) SER(S) 006033 00286 NON-SYN C 0.79 0.76 0.78 T 0.21 0.24 0.22 0066 ACC ATC THR(T) ILE(I) 006117 00000 ------------ C 0.77 0.65 0.71 G 0.23 0.35 0.29 0000 --- --- --- --- 006124 00000 ------------ A 0.89 0.88 0.88 G 0.11 0.12 0.12 0000 --- --- --- --- 006233 00000 ------------ G 0.90 0.75 0.83 T 0.10 0.25 0.17 0000 --- --- --- --- 006236 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006644 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006781 00000 ------------ - 0.16 0.25 0.20 + 0.84 0.75 0.80 0000 --- --- --- --- 007297 00000 ------------ - 0.89 0.76 0.83 + 0.11 0.24 0.17 0000 --- --- --- --- 007301 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 007351 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 007455 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 007535 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007593 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007807 00000 ------------ C 0.78 0.65 0.72 T 0.22 0.35 0.28 0000 --- --- --- --- 007951 00000 ------------ C 0.96 0.87 0.91 T 0.04 0.13 0.09 0000 --- --- --- --- 007969 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008023 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008210 00000 ------------ G 0.85 0.76 0.80 A 0.15 0.24 0.20 0000 --- --- --- --- 008394 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 008409 00000 ------------ G 0.91 0.76 0.84 A 0.09 0.24 0.16 0000 --- --- --- --- 008639 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008771 00000 ------------ G 0.89 0.76 0.83 C 0.11 0.24 0.17 0000 --- --- --- --- 008985 00000 ------------ C 0.89 0.76 0.83 T 0.11 0.24 0.17 0000 --- --- --- --- 009036 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 009390 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009556 00000 ------------ T 0.83 0.76 0.79 C 0.17 0.24 0.21 0000 --- --- --- --- 009658 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010126 00000 ------------ C 0.89 0.90 0.90 T 0.11 0.10 0.10 0000 --- --- --- --- 010160 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 010177 00000 ------------ G 0.83 0.74 0.78 C 0.17 0.26 0.22 0000 --- --- --- --- 010195 00000 ------------ A 0.83 0.74 0.78 T 0.17 0.26 0.22 0000 --- --- --- --- 010416 00000 ------------ C 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 010928 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 010965 00000 ------------ C 0.93 0.84 0.89 T 0.07 0.16 0.11 0000 --- --- --- --- 011095 00000 ------------ T 0.90 0.76 0.83 C 0.10 0.24 0.17 0000 --- --- --- --- 011111 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011184 00000 ------------ A 0.50 0.59 0.54 G 0.50 0.41 0.46 0000 --- --- --- --- 011231 00000 ------------ C 0.90 0.76 0.83 T 0.10 0.24 0.17 0000 --- --- --- --- 011288 00000 ------------ T 0.90 0.89 0.89 C 0.10 0.11 0.11 0000 --- --- --- --- 011462 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011499 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011616 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011662 00000 ------------ A 0.89 0.76 0.83 G 0.11 0.24 0.17 0000 --- --- --- --- 011896 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 011904 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 011909 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012491 00428 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0113 GAA GAC GLU(E) ASP(D) 013012 00000 ------------ A 0.88 0.84 0.86 G 0.12 0.16 0.14 0000 --- --- --- --- 013318 00000 ------------ T 0.98 0.89 0.93 C 0.02 0.11 0.07 0000 --- --- --- --- 013356 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013463 00000 ------------ T 0.83 0.76 0.80 C 0.17 0.24 0.20 0000 --- --- --- --- 013473 00000 ------------ A 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 013484 00000 ------------ T 0.90 0.76 0.83 G 0.10 0.24 0.17 0000 --- --- --- --- 013528 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013635 00000 ------------ G 0.90 0.76 0.83 C 0.10 0.24 0.17 0000 --- --- --- --- 013702 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014003 00000 ------------ A 0.93 0.85 0.90 C 0.07 0.15 0.10 0000 --- --- --- --- 014325 00000 ------------ T 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 014565 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014784 00000 ------------ A 0.85 0.76 0.80 G 0.15 0.24 0.20 0000 --- --- --- --- 014926 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 015083 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015242 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 015272 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015508 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 015554 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 015591 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015780 00000 ------------ C 0.89 0.76 0.83 A 0.11 0.24 0.17 0000 --- --- --- --- 015819 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 015940 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015976 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 016156 00501 NON-SYN A 0.90 0.75 0.83 G 0.10 0.25 0.17 0138 ATC GTC ILE(I) VAL(V) 016239 00584 SYNON C 0.89 0.85 0.87 T 0.11 0.15 0.13 0165 CAC CAT HIS(H) HIS(H) 016371 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 016429 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 016507 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 016650 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 016797 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 016919 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017156 00000 ------------ T 0.90 0.85 0.87 A 0.10 0.15 0.13 0000 --- --- --- --- 017279 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017543 00000 ------------ - 0.64 0.73 0.69 + 0.36 0.27 0.31 0000 --- --- --- --- 017582 00000 ------------ - 1.00 0.89 0.94 + 0.00 0.11 0.06 0000 --- --- --- --- 017622 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 017831 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 017943 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018045 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 018092 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 018101 00000 ------------ - 0.90 0.67 0.79 + 0.10 0.33 0.21 0000 --- --- --- --- 018119 00000 ------------ A 0.90 0.84 0.87 G 0.10 0.16 0.13 0000 --- --- --- --- 018170 00000 ------------ G 0.91 0.95 0.93 A 0.09 0.05 0.07 0000 --- --- --- --- 018537 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 018574 00650 SYNON G 0.90 1.00 0.95 A 0.10 0.00 0.05 0187 AAG AAA LYS(K) LYS(K) 018837 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018841 00000 ------------ T 0.62 0.70 0.66 G 0.38 0.30 0.34 0000 --- --- --- --- 019215 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 019280 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019544 00820 NON-SYN C 0.89 0.67 0.78 T 0.11 0.33 0.22 0244 ACC ATC THR(T) ILE(I) 020103 00000 ------------ T 0.65 0.70 0.67 C 0.35 0.30 0.33 0000 --- --- --- --- 020196 00000 ------------ G 0.62 0.70 0.66 A 0.38 0.30 0.34 0000 --- --- --- --- 020209 00000 ------------ A 0.89 0.89 0.89 G 0.11 0.11 0.11 0000 --- --- --- --- 020469 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 020562 00000 ------------ T 0.63 0.65 0.64 A 0.37 0.35 0.36 0000 --- --- --- --- 020923 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021243 01155 NON-SYN A 0.61 0.68 0.65 G 0.39 0.32 0.35 0356 ATC GTC ILE(I) VAL(V) 021903 00000 ------------ - 0.88 0.88 0.88 + 0.12 0.12 0.12 0000 --- --- --- --- 022256 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022391 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022478 00000 ------------ A 0.79 0.64 0.72 G 0.21 0.36 0.28 0000 --- --- --- --- 022799 00000 ------------ T 0.89 0.74 0.82 A 0.11 0.26 0.18 0000 --- --- --- --- 022814 00000 ------------ G 0.52 0.75 0.62 A 0.48 0.25 0.38 0000 --- --- --- --- 022887 00000 ------------ A 0.52 0.73 0.62 G 0.48 0.27 0.38 0000 --- --- --- --- 023105 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023113 00000 ------------ G 0.90 0.89 0.89 A 0.10 0.11 0.11 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000542: A 001036: A 002267: C 002548: AGAAG 005025: C 006781: T 007297: T 017543: A 017582: A 017622: CAA 018101: T 021903: AAAG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000068 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000451 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000558 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000580 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 000587 00000 ------------ C 0.75 0.35 0.55 G 0.25 0.65 0.45 0000 --- --- --- --- 000591 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 000592 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001115 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001479 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 001515 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001901 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001987 00000 ------------ + 0.15 0.00 0.07 - 0.85 1.00 0.93 0000 --- --- --- --- 002207 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002489 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002532 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002968 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 003224 00000 ------------ + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 003428 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003470 00000 ------------ A 0.77 0.34 0.57 T 0.23 0.66 0.43 0000 --- --- --- --- 003554 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003562 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003794 00047 5' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003821 00074 5' UTR C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 004028 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004115 00000 ------------ T 0.44 0.65 0.54 G 0.56 0.35 0.46 0000 --- --- --- --- 004183 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 004184 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004501 00000 ------------ C 0.86 0.69 0.77 T 0.14 0.31 0.23 0000 --- --- --- --- 004966 00000 ------------ + 0.21 0.71 0.44 - 0.79 0.29 0.56 0000 --- --- --- --- 005326 00000 ------------ + 0.10 0.00 0.06 - 0.90 1.00 0.94 0000 --- --- --- --- 005357 00000 ------------ C 0.88 0.70 0.80 T 0.12 0.30 0.20 0000 --- --- --- --- 006070 00813 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006174 00917 3' UTR A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 006370 01113 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006434 01177 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006492 01235 3' UTR A 0.88 0.65 0.77 T 0.12 0.35 0.23 0000 --- --- --- --- 006846 01589 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001987: T 003224: AGAAACTAAG 004966: A 005326: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000751 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 000935 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 001114 00000 ------------ G 0.71 0.93 0.83 A 0.29 0.07 0.17 0000 --- --- --- --- 001359 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 001453 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002196 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002216 00000 ------------ C 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 002251 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 002609 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002689 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003642 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 003876 00211 NON-SYN T 0.89 0.98 0.93 G 0.11 0.02 0.07 0031 ATG AGG MET(M) ARG(R) 004072 00407 SYNON C 0.89 1.00 0.95 T 0.11 0.00 0.05 0096 GCC GCT ALA(A) ALA(A) 004611 00946 NON-SYN G 0.72 0.93 0.83 C 0.28 0.07 0.17 0276 AGC ACC SER(S) THR(T) 004787 01122 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0335 CGT TGT ARG(R) CYS(C) 004809 01144 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0342 TCG TTG SER(S) LEU(L) 005072 01407 3' UTR A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 005130 01465 3' UTR T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 005244 01579 3' UTR G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 005585 01920 3' UTR G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 005686 02021 3' UTR G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 005931 02266 3' UTR C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006006 02341 3' UTR C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006156 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 006217 00000 ------------ G 0.61 0.93 0.77 C 0.39 0.07 0.23 0000 --- --- --- --- 006695 00000 ------------ T 0.97 0.95 0.96 C 0.03 0.05 0.04 0000 --- --- --- --- 006722 00000 ------------ G 0.91 0.95 0.93 A 0.09 0.05 0.07 0000 --- --- --- --- 006747 00000 ------------ C 0.75 0.50 0.62 G 0.25 0.50 0.38 0000 --- --- --- --- 006785 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006831 00000 ------------ C 0.66 0.61 0.63 T 0.34 0.39 0.37 0000 --- --- --- --- 006935 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 007021 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007100 00000 ------------ T 0.65 0.93 0.79 C 0.35 0.07 0.21 0000 --- --- --- --- 007605 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 007628 00000 ------------ T 0.76 0.93 0.86 C 0.24 0.07 0.14 0000 --- --- --- --- 007661 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 007914 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008421 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008663 00000 ------------ A 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 008942 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008998 00000 ------------ T 0.72 0.95 0.83 C 0.28 0.05 0.17 0000 --- --- --- --- 009000 00000 ------------ - 0.72 0.95 0.83 + 0.28 0.05 0.17 0000 --- --- --- --- 009007 00000 ------------ - 0.72 0.95 0.83 + 0.28 0.05 0.17 0000 --- --- --- --- 009278 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 009279 00000 ------------ - 0.72 0.95 0.84 + 0.28 0.05 0.16 0000 --- --- --- --- 009328 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 009473 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009787 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010188 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 010194 00000 ------------ - 0.19 0.52 0.36 + 0.81 0.48 0.64 0000 --- --- --- --- 010392 00000 ------------ A 0.89 0.98 0.93 G 0.11 0.02 0.07 0000 --- --- --- --- 010403 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 011069 00000 ------------ G 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 011143 00000 ------------ G 0.70 0.95 0.83 T 0.30 0.05 0.17 0000 --- --- --- --- 011460 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011576 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 011915 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012335 00000 ------------ T 0.64 0.93 0.79 G 0.36 0.07 0.21 0000 --- --- --- --- 012494 00000 ------------ G 0.68 0.93 0.81 A 0.32 0.07 0.19 0000 --- --- --- --- 012806 00000 ------------ G 0.80 0.50 0.66 A 0.20 0.50 0.34 0000 --- --- --- --- 012915 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 012931 00000 ------------ G 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013177 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013238 00000 ------------ C 0.82 0.53 0.68 T 0.18 0.47 0.32 0000 --- --- --- --- 013282 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013327 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013777 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 013849 00000 ------------ A 0.72 0.61 0.67 G 0.28 0.39 0.33 0000 --- --- --- --- 014019 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 014541 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 014720 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015251 00000 ------------ A 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 015590 00000 ------------ T 0.82 0.93 0.88 G 0.18 0.07 0.12 0000 --- --- --- --- 015707 00000 ------------ G 0.82 0.93 0.88 A 0.18 0.07 0.12 0000 --- --- --- --- 015989 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016258 00000 ------------ C 0.80 0.50 0.65 T 0.20 0.50 0.35 0000 --- --- --- --- 016372 00000 ------------ A 0.84 0.93 0.88 G 0.16 0.07 0.12 0000 --- --- --- --- 016777 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017357 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017566 00000 ------------ C 0.82 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 017820 00000 ------------ T 0.97 0.98 0.98 C 0.03 0.02 0.02 0000 --- --- --- --- 017921 00000 ------------ A 0.68 0.61 0.64 G 0.32 0.39 0.36 0000 --- --- --- --- 018014 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 018858 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 019070 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002251: ACA 007661: AA 009000: GTTC 009007: AC 009279: T 009328: T 010194: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000272 00000 ------------ - 0.24 0.50 0.37 + 0.76 0.50 0.63 0000 --- --- --- --- 000853 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 001844 00000 ------------ C 0.55 0.52 0.53 T 0.45 0.48 0.47 0000 --- --- --- --- 001924 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002155 00152 5' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 002263 00260 5' UTR A 0.73 0.52 0.63 G 0.27 0.48 0.37 0000 --- --- --- --- 002480 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002590 00000 ------------ G 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 002825 00000 ------------ - 0.24 0.52 0.40 + 0.76 0.48 0.60 0000 --- --- --- --- 004192 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004323 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004383 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005705 00000 ------------ - 0.24 0.50 0.37 + 0.76 0.50 0.63 0000 --- --- --- --- 006124 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006205 00000 ------------ G 0.81 0.96 0.88 A 0.19 0.04 0.12 0000 --- --- --- --- 006264 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006355 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 006362 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006385 00000 ------------ A 0.50 0.54 0.52 G 0.50 0.46 0.48 0000 --- --- --- --- 006549 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006791 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006798 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007039 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007389 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 007542 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007816 00000 ------------ C 0.88 0.96 0.92 T 0.12 0.04 0.08 0000 --- --- --- --- 007874 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 008077 00000 ------------ T 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 008515 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008654 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 008843 00000 ------------ C 0.82 0.59 0.71 T 0.18 0.41 0.29 0000 --- --- --- --- 009316 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 009858 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 010518 00000 ------------ G 0.69 0.61 0.65 A 0.31 0.39 0.35 0000 --- --- --- --- 011456 01077 SYNON A 0.94 1.00 0.97 G 0.06 0.00 0.03 0223 CCA CCG PRO(P) PRO(P) 011543 01164 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0252 GTC GTT VAL(V) VAL(V) 011555 01176 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0256 GTC GTT VAL(V) VAL(V) 011573 01194 SYNON T 0.67 0.43 0.55 C 0.33 0.57 0.45 0262 CTT CTC LEU(L) LEU(L) 011783 01404 SYNON T 0.98 0.78 0.88 C 0.02 0.22 0.12 0332 CAT CAC HIS(H) HIS(H) 011828 01449 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0347 TCC TCT SER(S) SER(S) 011997 01618 3' UTR C 0.81 0.50 0.66 T 0.19 0.50 0.34 0000 --- --- --- --- 012208 01829 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012225 01846 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012229 01850 3' UTR G 0.69 0.60 0.64 A 0.31 0.40 0.36 0000 --- --- --- --- 012752 02373 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012822 02443 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012849 02470 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013016 02637 3' UTR G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013300 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 013463 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 013483 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 013605 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013639 00000 ------------ C 0.81 0.48 0.65 T 0.19 0.52 0.35 0000 --- --- --- --- 013777 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 014085 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014109 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014211 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 014620 00000 ------------ G 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 014623 00000 ------------ G 0.52 0.57 0.54 A 0.48 0.43 0.46 0000 --- --- --- --- 014633 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 015899 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016272 00000 ------------ G 0.67 0.59 0.63 C 0.33 0.41 0.37 0000 --- --- --- --- 016473 00000 ------------ A 0.50 0.57 0.53 G 0.50 0.43 0.47 0000 --- --- --- --- 016961 00000 ------------ G 0.79 0.48 0.64 A 0.21 0.52 0.36 0000 --- --- --- --- 016964 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 017016 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017017 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 017508 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 017713 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 017825 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018243 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 018323 00000 ------------ C 0.67 0.47 0.58 T 0.33 0.53 0.42 0000 --- --- --- --- 018749 00000 ------------ C 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 018823 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018834 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018870 00000 ------------ C 0.90 1.00 0.94 T 0.10 0.00 0.06 0000 --- --- --- --- 019015 00000 ------------ G 0.67 0.48 0.57 T 0.33 0.52 0.43 0000 --- --- --- --- 019147 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 019162 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019263 00000 ------------ C 0.75 0.48 0.62 T 0.25 0.52 0.38 0000 --- --- --- --- 019634 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 019655 00000 ------------ G 0.83 0.48 0.66 A 0.17 0.52 0.34 0000 --- --- --- --- 019676 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019716 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020363 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020605 00000 ------------ A 0.50 0.57 0.53 T 0.50 0.43 0.47 0000 --- --- --- --- 020724 00000 ------------ C 0.50 0.57 0.53 A 0.50 0.43 0.47 0000 --- --- --- --- 020826 00000 ------------ G 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 021043 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021098 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 021409 00000 ------------ T 0.60 0.43 0.51 C 0.40 0.57 0.49 0000 --- --- --- --- 021600 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 021662 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021675 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022278 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023322 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 023342 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 023812 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023862 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024436 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 024505 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024597 00000 ------------ G 0.69 0.61 0.65 A 0.31 0.39 0.35 0000 --- --- --- --- 024894 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025138 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 025252 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025308 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000272: GAT 002825: GTTT 005705: A 007874: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000079 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 000164 00000 ------------ + 0.94 0.93 0.93 - 0.06 0.07 0.07 0000 --- --- --- --- 000208 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000229 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000448 00000 ------------ C 0.85 0.93 0.89 T 0.15 0.07 0.11 0000 --- --- --- --- 000940 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001007 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001245 00000 ------------ T 0.69 0.87 0.78 C 0.31 0.13 0.22 0000 --- --- --- --- 001303 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001314 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001324 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001386 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001539 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002049 00000 ------------ A 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 002710 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 002828 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002952 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003392 00000 ------------ C 0.76 0.87 0.82 T 0.24 0.13 0.18 0000 --- --- --- --- 003613 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003652 00000 ------------ A 0.81 0.54 0.68 C 0.19 0.46 0.32 0000 --- --- --- --- 003780 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003819 00000 ------------ G 0.77 0.87 0.82 C 0.23 0.13 0.18 0000 --- --- --- --- 003925 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003965 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004272 00000 ------------ A 0.64 0.88 0.75 G 0.36 0.12 0.25 0000 --- --- --- --- 004994 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005159 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005282 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005515 00000 ------------ C 0.87 0.88 0.88 A 0.13 0.12 0.12 0000 --- --- --- --- 005738 00361 NON-SYN C 0.87 0.88 0.88 T 0.13 0.12 0.12 0117 ACG ATG THR(T) MET(M) 005987 00000 ------------ + 1.00 0.98 0.99 - 0.00 0.02 0.01 0000 --- --- --- --- 006112 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000164: T 005987: ACA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000212 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 000246 00000 ------------ A 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 000376 00000 ------------ A 0.35 0.80 0.57 G 0.65 0.20 0.43 0000 --- --- --- --- 000404 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000458 00000 ------------ G 0.71 1.00 0.85 A 0.29 0.00 0.15 0000 --- --- --- --- 000851 00000 ------------ C 0.50 0.83 0.67 T 0.50 0.17 0.33 0000 --- --- --- --- 000914 00000 ------------ C 0.87 1.00 0.94 T 0.13 0.00 0.06 0000 --- --- --- --- 001127 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001130 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001263 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001312 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001509 00070 5' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001727 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001801 00000 ------------ T 0.50 0.77 0.63 G 0.50 0.23 0.37 0000 --- --- --- --- 001809 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 002059 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002316 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002584 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 002606 00000 ------------ G 0.44 0.93 0.68 A 0.56 0.07 0.32 0000 --- --- --- --- 002676 00000 ------------ A 0.85 0.95 0.90 T 0.15 0.05 0.10 0000 --- --- --- --- 002766 00000 ------------ C 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 002786 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 002825 00000 ------------ G 0.35 0.76 0.55 A 0.65 0.24 0.45 0000 --- --- --- --- 002935 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003095 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003148 00000 ------------ C 0.71 0.93 0.82 G 0.29 0.07 0.18 0000 --- --- --- --- 003189 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 003197 00000 ------------ G 0.35 0.78 0.56 A 0.65 0.22 0.44 0000 --- --- --- --- 003294 00000 ------------ C 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 003383 00000 ------------ T 0.34 0.74 0.53 C 0.66 0.26 0.47 0000 --- --- --- --- 003477 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003630 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003677 00000 ------------ C 0.35 0.76 0.55 T 0.65 0.24 0.45 0000 --- --- --- --- 003728 00000 ------------ G 0.98 0.65 0.82 A 0.02 0.35 0.18 0000 --- --- --- --- 003748 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003816 00000 ------------ G 0.65 0.76 0.70 C 0.35 0.24 0.30 0000 --- --- --- --- 003990 00000 ------------ G 0.65 0.75 0.70 A 0.35 0.25 0.30 0000 --- --- --- --- 004036 00000 ------------ C 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 004155 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004156 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004366 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004544 00000 ------------ C 1.00 0.72 0.87 T 0.00 0.28 0.13 0000 --- --- --- --- 004559 00000 ------------ G 0.98 0.97 0.98 A 0.02 0.03 0.02 0000 --- --- --- --- 004652 00000 ------------ T 0.96 0.89 0.92 C 0.04 0.11 0.08 0000 --- --- --- --- 004690 00000 ------------ T 0.71 0.84 0.77 C 0.29 0.16 0.23 0000 --- --- --- --- 004821 00000 ------------ A 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 004918 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 004944 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 005003 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 005048 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 005126 00000 ------------ A 0.56 0.75 0.65 G 0.44 0.25 0.35 0000 --- --- --- --- 005167 00000 ------------ C 0.73 0.82 0.77 T 0.27 0.18 0.23 0000 --- --- --- --- 005338 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 005404 00000 ------------ G 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 005479 00000 ------------ G 0.87 0.32 0.60 T 0.13 0.68 0.40 0000 --- --- --- --- 005728 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005740 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005813 00000 ------------ G 0.78 1.00 0.90 A 0.22 0.00 0.10 0000 --- --- --- --- 006266 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006301 00000 ------------ A 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 006369 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007036 00000 ------------ A 0.71 0.93 0.82 C 0.29 0.07 0.17 0000 --- --- --- --- 007296 00000 ------------ T 0.26 0.75 0.51 C 0.74 0.25 0.49 0000 --- --- --- --- 007313 00323 SYNON G 0.79 1.00 0.90 T 0.21 0.00 0.10 0048 GGG GGT GLY(G) GLY(G) 007357 00367 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0063 AGG AAG ARG(R) LYS(K) 007433 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007443 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008023 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008044 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 008123 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 008243 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 008580 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 008638 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 008905 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 008928 00000 ------------ T 0.70 0.93 0.82 C 0.30 0.07 0.18 0000 --- --- --- --- 009115 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009276 00894 NON-SYN G 0.96 1.00 0.98 C 0.04 0.00 0.02 0239 GAG CAG GLU(E) GLN(Q) 009586 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009681 00000 ------------ T 0.98 0.84 0.91 C 0.02 0.16 0.09 0000 --- --- --- --- 009693 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009807 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009867 00000 ------------ C 0.98 0.87 0.92 T 0.02 0.13 0.08 0000 --- --- --- --- 009929 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009939 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009944 EXON9 -2 SPLICE A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010027 01042 NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 0288 TAC TGC TYR(Y) CYS(C) 010031 01046 SYNON C 0.96 1.00 0.98 A 0.04 0.00 0.02 0289 CTC CTA LEU(L) LEU(L) 010068 00000 ------------ - 0.89 1.00 0.95 + 0.11 0.00 0.05 0000 --- --- --- --- 010083 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 010171 00000 ------------ G 0.75 0.41 0.59 A 0.25 0.59 0.41 0000 --- --- --- --- 010181 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010198 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010217 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010277 00000 ------------ G 0.62 0.86 0.74 C 0.38 0.14 0.26 0000 --- --- --- --- 010299 00000 ------------ - 0.98 0.87 0.92 + 0.02 0.13 0.08 0000 --- --- --- --- 010667 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010762 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 010766 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010914 00000 ------------ G 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- 010925 00000 ------------ A 0.72 0.91 0.82 G 0.28 0.09 0.18 0000 --- --- --- --- 010949 00000 ------------ G 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 011121 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 013403 00000 ------------ T 0.55 0.86 0.70 G 0.45 0.14 0.30 0000 --- --- --- --- 013412 00000 ------------ C 0.43 0.86 0.64 T 0.57 0.14 0.36 0000 --- --- --- --- 013441 00000 ------------ T 0.55 0.90 0.73 C 0.45 0.10 0.27 0000 --- --- --- --- 013638 00000 ------------ G 0.53 0.83 0.69 A 0.47 0.17 0.31 0000 --- --- --- --- 013647 00000 ------------ A 0.50 0.83 0.68 G 0.50 0.17 0.33 0000 --- --- --- --- 013656 00000 ------------ C 0.47 0.86 0.68 T 0.53 0.14 0.33 0000 --- --- --- --- 015256 00000 ------------ G 0.58 0.42 0.51 T 0.42 0.57 0.49 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001809: TT 005338: T 010068: TGTG 010299: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000092 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 000133 00000 ------------ G 1.00 0.89 0.94 A 0.00 0.11 0.06 0000 --- --- --- --- 000642 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000854 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001265 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001533 00000 ------------ - 0.94 0.91 0.93 + 0.06 0.09 0.07 0000 --- --- --- --- 002315 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002365 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002456 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002940 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 003023 00000 ------------ C 0.91 0.91 0.91 T 0.09 0.09 0.09 0000 --- --- --- --- 003038 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003115 00000 ------------ - 0.53 0.90 0.72 + 0.47 0.10 0.28 0000 --- --- --- --- 003189 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 003536 00000 ------------ G 0.73 1.00 0.86 C 0.27 0.00 0.14 0000 --- --- --- --- 003573 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003819 00000 ------------ G 0.75 0.91 0.83 T 0.25 0.09 0.17 0000 --- --- --- --- 003877 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004144 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 004602 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004797 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004972 00000 ------------ - 0.52 0.09 0.31 + 0.48 0.91 0.69 0000 --- --- --- --- 005821 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005880 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005954 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006204 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 006661 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 006998 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 007122 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007147 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007234 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 007392 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007597 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007794 00000 ------------ C 0.91 0.91 0.91 G 0.09 0.09 0.09 0000 --- --- --- --- 007878 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008004 00000 ------------ G 0.91 0.91 0.91 A 0.09 0.09 0.09 0000 --- --- --- --- 008074 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 008170 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008252 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008320 00000 ------------ T 0.89 0.91 0.90 G 0.11 0.09 0.10 0000 --- --- --- --- 009043 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 009430 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 009663 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010002 00000 ------------ G 0.94 0.91 0.92 C 0.06 0.09 0.08 0000 --- --- --- --- 010028 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010186 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010238 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010390 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010639 00000 ------------ - 0.48 0.91 0.68 + 0.52 0.09 0.32 0000 --- --- --- --- 010900 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011463 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 011700 00000 ------------ T 0.48 0.91 0.69 C 0.52 0.09 0.31 0000 --- --- --- --- 011902 00000 ------------ A 0.45 0.92 0.67 C 0.55 0.08 0.33 0000 --- --- --- --- 012264 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 012326 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012429 00000 ------------ A 0.67 0.90 0.78 T 0.33 0.10 0.22 0000 --- --- --- --- 013026 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013197 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013303 00000 ------------ G 0.48 0.91 0.70 T 0.52 0.09 0.30 0000 --- --- --- --- 013439 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013575 00000 ------------ C 0.80 0.88 0.83 T 0.20 0.12 0.17 0000 --- --- --- --- 013591 00000 ------------ T 0.93 0.88 0.91 C 0.07 0.12 0.09 0000 --- --- --- --- 013823 00000 ------------ G 0.88 0.67 0.77 A 0.12 0.33 0.23 0000 --- --- --- --- 013899 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 014289 00343 NON-SYN T 0.97 1.00 0.99 G 0.03 0.00 0.01 0098 AGT AGG SER(S) ARG(R) 014368 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 014564 00000 ------------ T 0.50 0.97 0.72 A 0.50 0.03 0.28 0000 --- --- --- --- 014991 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 015070 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015411 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015452 00000 ------------ C 0.79 0.93 0.86 A 0.21 0.07 0.14 0000 --- --- --- --- 015525 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 016227 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 016413 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 016988 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017150 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017454 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 017469 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017499 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 017515 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017816 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018018 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018118 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018648 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018788 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019016 00000 ------------ G 0.75 0.91 0.83 T 0.25 0.09 0.17 0000 --- --- --- --- 019035 00000 ------------ G 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 019079 00000 ------------ A 0.68 0.91 0.80 T 0.32 0.09 0.20 0000 --- --- --- --- 019099 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019376 00000 ------------ T 0.96 0.91 0.93 G 0.04 0.09 0.07 0000 --- --- --- --- 019379 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 019425 00000 ------------ G 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 019498 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 019816 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 019957 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020230 00000 ------------ T 0.48 0.91 0.68 G 0.52 0.09 0.32 0000 --- --- --- --- 020231 00000 ------------ T 0.48 0.91 0.68 C 0.52 0.09 0.32 0000 --- --- --- --- 020265 00000 ------------ G 0.48 0.91 0.68 A 0.52 0.09 0.32 0000 --- --- --- --- 020496 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020721 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020736 00000 ------------ A 0.96 0.90 0.93 T 0.04 0.10 0.07 0000 --- --- --- --- 020778 00000 ------------ T 0.98 0.97 0.98 G 0.02 0.03 0.02 0000 --- --- --- --- 020968 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 021342 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021784 00000 ------------ C 0.92 1.00 0.95 T 0.08 0.00 0.05 0000 --- --- --- --- 022008 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 022062 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 022150 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022155 00000 ------------ G 0.90 0.90 0.90 A 0.10 0.10 0.10 0000 --- --- --- --- 022182 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022262 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022442 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 022522 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 023172 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 023338 00000 ------------ C 0.87 0.53 0.70 G 0.13 0.47 0.30 0000 --- --- --- --- 023435 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 023569 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023595 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023602 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023619 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023900 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023920 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 024072 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024359 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024430 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 024472 00000 ------------ T 0.79 0.88 0.83 C 0.21 0.12 0.17 0000 --- --- --- --- 024511 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024674 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 025006 00000 ------------ - 0.30 0.48 0.39 + 0.70 0.52 0.61 0000 --- --- --- --- 025036 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 025068 00000 ------------ C 0.48 0.90 0.68 T 0.52 0.10 0.32 0000 --- --- --- --- 025480 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 025870 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025997 00000 ------------ C 0.56 0.91 0.73 T 0.44 0.09 0.27 0000 --- --- --- --- 026476 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 026488 00000 ------------ G 0.75 0.91 0.83 A 0.25 0.09 0.17 0000 --- --- --- --- 026536 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 026642 01218 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0390 CAC CGC HIS(H) ARG(R) 026788 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027217 00000 ------------ C 0.48 0.91 0.70 T 0.52 0.09 0.30 0000 --- --- --- --- 027309 00000 ------------ A 0.48 0.91 0.70 G 0.52 0.09 0.30 0000 --- --- --- --- 027403 00000 ------------ T 0.91 0.96 0.93 G 0.09 0.04 0.07 0000 --- --- --- --- 028344 00000 ------------ G 0.71 0.97 0.85 C 0.29 0.03 0.15 0000 --- --- --- --- 028384 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 028568 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028647 00000 ------------ G 0.89 0.93 0.91 A 0.11 0.07 0.09 0000 --- --- --- --- 028692 00000 ------------ A 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 028713 00000 ------------ G 0.56 0.93 0.76 T 0.44 0.07 0.24 0000 --- --- --- --- 028715 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 028754 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 028776 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 028854 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 029429 01331 NON-SYN G 0.69 0.90 0.80 A 0.31 0.10 0.20 0428 GCT ACT ALA(A) THR(T) 029798 01578 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029922 01702 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029933 01713 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030080 01860 3' UTR A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030172 01952 3' UTR T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 030260 02040 3' UTR A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 030275 02055 3' UTR A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 030641 02421 3' UTR T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 031053 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031429 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031446 00000 ------------ T 0.46 0.91 0.68 C 0.54 0.09 0.32 0000 --- --- --- --- 031539 00000 ------------ C 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 031545 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031547 00000 ------------ G 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 031840 00000 ------------ A 0.64 0.45 0.55 G 0.36 0.55 0.45 0000 --- --- --- --- 031918 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032085 00000 ------------ T 0.50 0.96 0.73 C 0.50 0.04 0.27 0000 --- --- --- --- 032356 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 032413 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 032469 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032501 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000092: TCT 001533: GC 003115: TGCCAAAAACCTTGG 004972: T 006661: TC 010639: TATAT 012264: GTT 013899: TCTC 015525: T 020968: TTA 022442: AA 025006: AAAA 025036: TA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000099 00000 ------------ T 1.00 0.88 0.96 C 0.00 0.12 0.04 0000 --- --- --- --- 000111 00000 ------------ C 0.50 0.62 0.54 A 0.50 0.38 0.46 0000 --- --- --- --- 001033 00000 ------------ C 0.94 0.67 0.81 T 0.06 0.33 0.19 0000 --- --- --- --- 001247 00000 ------------ G 0.62 0.52 0.57 C 0.38 0.48 0.43 0000 --- --- --- --- 001400 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001458 00000 ------------ C 0.67 0.82 0.73 T 0.33 0.18 0.27 0000 --- --- --- --- 002190 00000 ------------ C 0.65 0.48 0.57 T 0.35 0.52 0.43 0000 --- --- --- --- 002248 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 002918 00000 ------------ G 0.81 0.87 0.84 C 0.19 0.13 0.16 0000 --- --- --- --- 005252 00000 ------------ A 0.75 0.83 0.79 G 0.25 0.17 0.21 0000 --- --- --- --- 005561 00000 ------------ T 1.00 0.85 0.91 C 0.00 0.15 0.09 0000 --- --- --- --- 006092 00000 ------------ G 0.90 0.90 0.90 A 0.10 0.10 0.10 0000 --- --- --- --- 006152 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 006450 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 006456 00000 ------------ C 0.80 0.95 0.88 T 0.20 0.05 0.12 0000 --- --- --- --- 006790 00000 ------------ - 0.15 0.29 0.22 + 0.85 0.71 0.78 0000 --- --- --- --- 006845 00000 ------------ T 0.54 0.67 0.60 G 0.46 0.33 0.40 0000 --- --- --- --- 007021 00000 ------------ G 0.71 0.76 0.73 T 0.29 0.24 0.27 0000 --- --- --- --- 007086 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009244 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009314 00000 ------------ T 0.54 0.63 0.59 C 0.46 0.37 0.41 0000 --- --- --- --- 009482 00000 ------------ A 0.74 0.36 0.56 T 0.26 0.64 0.44 0000 --- --- --- --- 009554 00000 ------------ T 0.98 0.88 0.93 C 0.02 0.12 0.07 0000 --- --- --- --- 009632 00000 ------------ G 0.69 0.82 0.75 T 0.31 0.18 0.25 0000 --- --- --- --- 009696 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009779 00000 ------------ A 0.72 0.95 0.83 C 0.28 0.05 0.17 0000 --- --- --- --- 009800 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 010060 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010127 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010164 00000 ------------ T 0.74 0.41 0.58 C 0.26 0.59 0.42 0000 --- --- --- --- 015028 00000 ------------ A 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 015392 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 015691 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015966 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 016703 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 016753 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021225 00000 ------------ C 0.83 0.95 0.89 G 0.17 0.05 0.11 0000 --- --- --- --- 021540 00000 ------------ - 0.67 0.87 0.77 + 0.33 0.13 0.23 0000 --- --- --- --- 022061 00000 ------------ A 0.65 0.54 0.60 G 0.35 0.46 0.40 0000 --- --- --- --- 022850 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022911 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023078 00000 ------------ C 0.83 0.73 0.78 A 0.17 0.27 0.22 0000 --- --- --- --- 023109 00000 ------------ A 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 026741 00000 ------------ A 0.86 0.72 0.79 G 0.14 0.28 0.21 0000 --- --- --- --- 026805 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 026937 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 027043 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 027064 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 027138 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 027419 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 027615 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 028379 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 028389 00000 ------------ G 0.91 0.89 0.90 A 0.09 0.11 0.10 0000 --- --- --- --- 028520 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 028823 00000 ------------ - 0.19 0.15 0.17 + 0.81 0.85 0.83 0000 --- --- --- --- 031888 00000 ------------ G 0.81 0.67 0.74 A 0.19 0.33 0.26 0000 --- --- --- --- 031961 00000 ------------ - 0.72 0.85 0.78 + 0.28 0.15 0.22 0000 --- --- --- --- 032047 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 032181 00000 ------------ T 0.86 0.91 0.89 C 0.14 0.09 0.11 0000 --- --- --- --- 033241 00000 ------------ C 0.67 0.41 0.54 T 0.33 0.59 0.46 0000 --- --- --- --- 038873 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 039267 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 039426 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039440 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 039534 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 039792 00000 ------------ G 0.78 0.55 0.65 T 0.22 0.45 0.35 0000 --- --- --- --- 040059 00000 ------------ - 0.83 0.91 0.88 + 0.17 0.09 0.12 0000 --- --- --- --- 040319 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 040528 00000 ------------ C 0.65 0.85 0.76 A 0.35 0.15 0.24 0000 --- --- --- --- 041928 00000 ------------ G 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 042046 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 042144 00000 ------------ T 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 042389 00000 ------------ G 0.93 0.96 0.95 A 0.07 0.04 0.05 0000 --- --- --- --- 042480 00000 ------------ T 0.80 0.96 0.88 C 0.20 0.04 0.12 0000 --- --- --- --- 042850 00000 ------------ C 0.58 0.65 0.62 T 0.42 0.35 0.38 0000 --- --- --- --- 043123 00000 ------------ A 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 043536 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 053984 00000 ------------ G 0.61 0.55 0.58 T 0.39 0.45 0.42 0000 --- --- --- --- 054005 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 054021 00000 ------------ - 0.89 0.68 0.78 + 0.11 0.32 0.22 0000 --- --- --- --- 054058 00000 ------------ A 0.61 0.55 0.58 G 0.39 0.45 0.42 0000 --- --- --- --- 054220 00000 ------------ C 0.57 0.61 0.59 T 0.43 0.39 0.41 0000 --- --- --- --- 054231 00000 ------------ C 0.72 0.62 0.67 T 0.28 0.38 0.33 0000 --- --- --- --- 054332 00000 ------------ T 0.63 0.58 0.61 C 0.37 0.42 0.39 0000 --- --- --- --- 054402 00000 ------------ G 0.82 0.66 0.74 T 0.17 0.34 0.26 0000 --- --- --- --- 054479 00000 ------------ G 0.53 0.55 0.54 C 0.47 0.45 0.46 0000 --- --- --- --- 054498 00000 ------------ C 0.93 0.95 0.94 T 0.07 0.05 0.06 0000 --- --- --- --- 054832 00000 ------------ A 0.81 0.85 0.83 G 0.19 0.15 0.17 0000 --- --- --- --- 054859 00000 ------------ T 0.81 0.85 0.83 C 0.19 0.15 0.17 0000 --- --- --- --- 054958 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 054984 00000 ------------ C 0.81 0.85 0.83 T 0.19 0.15 0.17 0000 --- --- --- --- 055159 00000 ------------ T 0.81 0.85 0.83 G 0.19 0.15 0.17 0000 --- --- --- --- 055289 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 055317 00000 ------------ G 0.88 0.68 0.78 A 0.12 0.32 0.22 0000 --- --- --- --- 055352 00000 ------------ T 0.83 0.84 0.84 C 0.17 0.16 0.16 0000 --- --- --- --- 055427 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 055743 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 055753 00000 ------------ C 0.86 0.88 0.87 T 0.14 0.12 0.13 0000 --- --- --- --- 055756 00000 ------------ - 0.80 0.84 0.82 + 0.20 0.16 0.18 0000 --- --- --- --- 055883 00000 ------------ C 0.58 0.59 0.59 A 0.42 0.41 0.41 0000 --- --- --- --- 056153 00000 ------------ - 0.00 0.13 0.06 + 1.00 0.87 0.94 0000 --- --- --- --- 056191 00000 ------------ T 0.79 0.61 0.70 C 0.21 0.39 0.30 0000 --- --- --- --- 056311 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 056447 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 056522 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 056585 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 056920 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 056993 00000 ------------ G 0.81 0.85 0.83 A 0.19 0.15 0.17 0000 --- --- --- --- 057035 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 057050 00000 ------------ C 0.67 0.61 0.64 T 0.33 0.39 0.36 0000 --- --- --- --- 057106 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 057107 00000 ------------ G 0.81 0.85 0.83 A 0.19 0.15 0.17 0000 --- --- --- --- 057114 00000 ------------ A 0.94 0.96 0.95 G 0.06 0.04 0.05 0000 --- --- --- --- 057137 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 057156 00000 ------------ T 0.81 0.85 0.83 C 0.19 0.15 0.17 0000 --- --- --- --- 057351 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 057361 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 057389 00000 ------------ C 0.81 0.85 0.83 T 0.19 0.15 0.17 0000 --- --- --- --- 057410 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 057412 00000 ------------ T 0.81 0.85 0.83 G 0.19 0.15 0.17 0000 --- --- --- --- 057444 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 057683 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 057701 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 057752 00000 ------------ C 0.94 0.95 0.95 T 0.06 0.05 0.05 0000 --- --- --- --- 058142 00000 ------------ A 0.82 0.86 0.84 G 0.18 0.14 0.16 0000 --- --- --- --- 058188 00000 ------------ T 0.84 0.86 0.85 G 0.16 0.14 0.15 0000 --- --- --- --- 058437 00000 ------------ C 0.96 0.95 0.95 T 0.04 0.05 0.05 0000 --- --- --- --- 058472 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 058590 00000 ------------ A 0.81 0.84 0.83 G 0.19 0.16 0.17 0000 --- --- --- --- 058821 00000 ------------ G 0.83 0.72 0.78 T 0.17 0.28 0.22 0000 --- --- --- --- 058824 00000 ------------ C 0.85 0.97 0.90 T 0.15 0.03 0.10 0000 --- --- --- --- 059160 00000 ------------ C 0.75 0.86 0.80 T 0.25 0.14 0.20 0000 --- --- --- --- 059185 00000 ------------ G 0.83 0.97 0.90 A 0.17 0.03 0.10 0000 --- --- --- --- 059189 00000 ------------ C 0.68 0.66 0.67 T 0.33 0.34 0.33 0000 --- --- --- --- 059317 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 059349 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 059403 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 059486 00000 ------------ G 0.81 0.85 0.83 T 0.19 0.15 0.17 0000 --- --- --- --- 059497 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 059514 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 059562 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 059575 00000 ------------ G 0.83 0.80 0.82 A 0.17 0.20 0.18 0000 --- --- --- --- 059837 00000 ------------ A 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 059875 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 060265 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 060266 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 060433 00000 ------------ G 0.70 0.68 0.69 C 0.30 0.32 0.31 0000 --- --- --- --- 060528 00000 ------------ C 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 060638 00000 ------------ A 0.83 0.85 0.84 G 0.17 0.15 0.16 0000 --- --- --- --- 060705 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 060870 00000 ------------ G 0.81 0.85 0.83 A 0.19 0.15 0.17 0000 --- --- --- --- 060879 00000 ------------ C 0.81 0.85 0.83 T 0.19 0.15 0.17 0000 --- --- --- --- 060949 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 060978 00000 ------------ C 0.88 0.70 0.79 T 0.12 0.30 0.21 0000 --- --- --- --- 061017 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 061057 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 061123 00000 ------------ G 0.81 0.85 0.83 A 0.19 0.15 0.17 0000 --- --- --- --- 061687 00000 ------------ G 0.81 0.65 0.74 A 0.19 0.35 0.26 0000 --- --- --- --- 061857 00000 ------------ G 0.77 0.88 0.82 A 0.23 0.12 0.18 0000 --- --- --- --- 061912 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 061914 00000 ------------ C 0.50 0.54 0.51 T 0.50 0.46 0.49 0000 --- --- --- --- 062112 00000 ------------ T 0.88 0.78 0.83 G 0.12 0.22 0.17 0000 --- --- --- --- 062144 00000 ------------ - 0.26 0.12 0.20 + 0.74 0.88 0.80 0000 --- --- --- --- 062150 00000 ------------ C 0.78 0.95 0.86 T 0.22 0.05 0.14 0000 --- --- --- --- 062297 00000 ------------ G 0.75 0.72 0.73 A 0.25 0.28 0.27 0000 --- --- --- --- 062324 00000 ------------ A 0.79 0.91 0.85 G 0.21 0.09 0.15 0000 --- --- --- --- 062407 00000 ------------ C 0.50 0.65 0.57 T 0.50 0.35 0.43 0000 --- --- --- --- 062409 00000 ------------ G 0.50 0.65 0.57 C 0.50 0.35 0.43 0000 --- --- --- --- 062410 00000 ------------ C 0.79 0.91 0.85 A 0.21 0.09 0.15 0000 --- --- --- --- 062615 00000 ------------ - 0.98 1.00 0.98 + 0.02 0.00 0.02 0000 --- --- --- --- 062855 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 062882 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 062946 00000 ------------ C 0.75 0.89 0.82 T 0.25 0.11 0.18 0000 --- --- --- --- 063092 00000 ------------ T 0.78 0.89 0.84 C 0.22 0.11 0.16 0000 --- --- --- --- 063127 00000 ------------ C 0.96 0.95 0.96 T 0.04 0.05 0.04 0000 --- --- --- --- 063181 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 063191 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 063274 00000 ------------ G 0.50 0.61 0.55 A 0.50 0.39 0.45 0000 --- --- --- --- 063459 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 063606 00000 ------------ G 0.96 0.89 0.92 A 0.04 0.11 0.08 0000 --- --- --- --- 063682 00000 ------------ T 0.76 0.89 0.83 C 0.24 0.11 0.17 0000 --- --- --- --- 063756 00000 ------------ C 0.84 0.89 0.86 G 0.16 0.11 0.14 0000 --- --- --- --- 063938 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 063966 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 064448 00801 SYNON C 0.75 0.68 0.72 T 0.25 0.32 0.28 0253 TTC TTT PHE(F) PHE(F) 064640 00000 ------------ G 0.75 0.68 0.72 A 0.25 0.33 0.28 0000 --- --- --- --- 064693 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 064696 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 064771 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 065203 00000 ------------ T 0.75 0.72 0.73 G 0.25 0.28 0.27 0000 --- --- --- --- 065335 00000 ------------ T 0.77 0.67 0.73 C 0.23 0.33 0.27 0000 --- --- --- --- 065446 00000 ------------ C 0.74 0.93 0.83 G 0.26 0.07 0.17 0000 --- --- --- --- 065565 00000 ------------ T 0.50 0.60 0.54 C 0.50 0.40 0.46 0000 --- --- --- --- 065730 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 065777 00000 ------------ G 0.79 0.90 0.84 C 0.21 0.10 0.16 0000 --- --- --- --- 065900 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 066062 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 066144 00000 ------------ G 0.48 0.61 0.54 A 0.52 0.39 0.46 0000 --- --- --- --- 066151 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 066167 00000 ------------ G 0.48 0.61 0.54 C 0.52 0.39 0.46 0000 --- --- --- --- 066740 00000 ------------ A 0.83 0.83 0.83 T 0.17 0.17 0.17 0000 --- --- --- --- 066745 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 066947 00000 ------------ G 0.50 0.59 0.54 A 0.50 0.41 0.46 0000 --- --- --- --- 067072 00000 ------------ G 0.79 0.89 0.84 A 0.21 0.11 0.16 0000 --- --- --- --- 067163 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 067466 00000 ------------ T 0.50 0.61 0.55 G 0.50 0.39 0.45 0000 --- --- --- --- 067517 00000 ------------ T 0.79 0.89 0.84 C 0.21 0.11 0.16 0000 --- --- --- --- 067600 00000 ------------ G 0.75 0.72 0.73 A 0.25 0.28 0.27 0000 --- --- --- --- 067690 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 067798 00000 ------------ T 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- 068222 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 068261 00000 ------------ A 0.94 0.95 0.95 G 0.06 0.05 0.05 0000 --- --- --- --- 068315 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 068321 00000 ------------ A 0.50 0.57 0.53 G 0.50 0.43 0.47 0000 --- --- --- --- 068456 00831 SYNON T 0.79 0.88 0.83 C 0.21 0.12 0.17 0263 GCT GCC ALA(A) ALA(A) 068492 00867 SYNON G 0.71 0.73 0.72 A 0.29 0.27 0.28 0275 ACG ACA THR(T) THR(T) 068516 00891 SYNON C 0.85 1.00 0.93 T 0.15 0.00 0.07 0283 GAC GAT ASP(D) ASP(D) 068825 00000 ------------ G 0.48 0.61 0.54 A 0.52 0.39 0.46 0000 --- --- --- --- 068955 01035 SYNON A 0.79 0.89 0.84 G 0.21 0.11 0.16 0331 GCA GCG ALA(A) ALA(A) 069069 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 069455 00000 ------------ G 0.55 0.62 0.58 T 0.45 0.38 0.42 0000 --- --- --- --- 069457 00000 ------------ A 0.73 0.74 0.73 T 0.27 0.26 0.27 0000 --- --- --- --- 069766 00000 ------------ G 0.82 0.88 0.85 C 0.18 0.12 0.15 0000 --- --- --- --- 069767 00000 ------------ T 0.82 0.88 0.85 C 0.18 0.12 0.15 0000 --- --- --- --- 069912 00000 ------------ A 0.50 0.61 0.56 G 0.50 0.39 0.44 0000 --- --- --- --- 070078 00000 ------------ A 1.00 0.93 0.96 G 0.00 0.07 0.04 0000 --- --- --- --- 070293 00000 ------------ G 0.78 0.89 0.83 A 0.22 0.11 0.17 0000 --- --- --- --- 070692 00000 ------------ A 0.44 0.57 0.50 G 0.56 0.43 0.50 0000 --- --- --- --- 070817 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 071038 00000 ------------ T 0.81 0.90 0.85 C 0.19 0.10 0.15 0000 --- --- --- --- 071182 00000 ------------ T 0.83 0.86 0.84 A 0.17 0.14 0.16 0000 --- --- --- --- 071393 00000 ------------ T 0.88 0.58 0.73 G 0.12 0.42 0.27 0000 --- --- --- --- 071503 00000 ------------ G 0.97 0.97 0.97 C 0.03 0.03 0.03 0000 --- --- --- --- 071553 00000 ------------ T 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 071689 00000 ------------ A 0.48 0.65 0.56 G 0.52 0.35 0.44 0000 --- --- --- --- 072007 00000 ------------ A 0.95 0.95 0.95 G 0.05 0.05 0.05 0000 --- --- --- --- 072271 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 072595 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 072645 00000 ------------ A 0.78 0.89 0.83 G 0.22 0.11 0.17 0000 --- --- --- --- 072933 00000 ------------ T 0.75 0.68 0.72 C 0.25 0.32 0.28 0000 --- --- --- --- 073085 00000 ------------ C 0.87 0.81 0.84 T 0.13 0.19 0.16 0000 --- --- --- --- 073771 00000 ------------ T 0.96 0.95 0.96 C 0.04 0.05 0.04 0000 --- --- --- --- 073780 00000 ------------ T 0.79 0.90 0.84 G 0.21 0.10 0.16 0000 --- --- --- --- 074245 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 074554 00000 ------------ C 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 074721 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 074995 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 075341 00000 ------------ A 0.79 0.89 0.84 G 0.21 0.11 0.16 0000 --- --- --- --- 075966 00000 ------------ A 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 076116 00000 ------------ G 0.77 0.89 0.83 A 0.23 0.11 0.17 0000 --- --- --- --- 076182 00000 ------------ G 0.78 0.91 0.84 T 0.22 0.09 0.16 0000 --- --- --- --- 076313 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 076377 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 076386 00000 ------------ A 0.78 0.91 0.84 G 0.22 0.09 0.16 0000 --- --- --- --- 076441 00000 ------------ - 0.16 0.11 0.14 + 0.84 0.89 0.86 0000 --- --- --- --- 076596 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 076599 00000 ------------ - 1.00 0.93 0.97 + 0.00 0.07 0.03 0000 --- --- --- --- 076894 00000 ------------ A 0.84 1.00 0.91 G 0.16 0.00 0.09 0000 --- --- --- --- 077014 00000 ------------ A 0.57 0.66 0.61 G 0.43 0.34 0.39 0000 --- --- --- --- 077307 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 077516 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 077740 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 078143 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 078299 00000 ------------ G 0.88 0.80 0.84 A 0.12 0.20 0.16 0000 --- --- --- --- 078745 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 079845 00000 ------------ A 0.82 0.78 0.80 T 0.18 0.22 0.20 0000 --- --- --- --- 080157 02115 NON-SYN C 0.97 1.00 0.98 A 0.03 0.00 0.02 0691 AAC AAA ASN(N) LYS(K) 080557 00000 ------------ A 0.79 0.87 0.83 G 0.21 0.13 0.17 0000 --- --- --- --- 080559 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 080579 00000 ------------ T 0.79 0.61 0.70 C 0.21 0.39 0.30 0000 --- --- --- --- 080580 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 080706 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 080839 00000 ------------ A 0.98 0.97 0.98 G 0.02 0.03 0.02 0000 --- --- --- --- 081041 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 081241 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 081383 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 081397 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 082326 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 082451 00000 ------------ A 0.78 0.89 0.84 G 0.22 0.11 0.16 0000 --- --- --- --- 082721 00000 ------------ - 0.14 0.00 0.07 + 0.86 1.00 0.93 0000 --- --- --- --- 083004 00000 ------------ - 0.23 0.11 0.17 + 0.77 0.89 0.83 0000 --- --- --- --- 083218 00000 ------------ A 0.81 0.61 0.71 G 0.19 0.39 0.29 0000 --- --- --- --- 083253 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 083364 00000 ------------ G 0.78 0.91 0.84 A 0.22 0.09 0.16 0000 --- --- --- --- 083416 00000 ------------ T 0.79 0.91 0.85 C 0.21 0.09 0.15 0000 --- --- --- --- 083461 00000 ------------ A 0.78 0.91 0.84 G 0.22 0.09 0.16 0000 --- --- --- --- 083475 00000 ------------ G 0.85 0.91 0.88 C 0.15 0.09 0.12 0000 --- --- --- --- 083714 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 083801 00000 ------------ - 0.85 0.89 0.87 + 0.15 0.11 0.13 0000 --- --- --- --- 083839 00000 ------------ A 0.79 0.89 0.84 G 0.21 0.11 0.16 0000 --- --- --- --- 083860 00000 ------------ G 0.90 0.83 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 083977 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 083986 00000 ------------ A 0.98 0.80 0.89 G 0.02 0.20 0.11 0000 --- --- --- --- 084171 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 084227 00000 ------------ C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 084259 00000 ------------ C 0.78 0.88 0.83 T 0.22 0.12 0.17 0000 --- --- --- --- 084524 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 084630 00000 ------------ T 0.78 0.89 0.83 C 0.23 0.11 0.17 0000 --- --- --- --- 084747 00000 ------------ T 0.88 0.76 0.82 A 0.12 0.24 0.17 0000 --- --- --- --- 084787 00000 ------------ T 0.52 0.61 0.56 C 0.48 0.39 0.44 0000 --- --- --- --- 084796 00000 ------------ T 0.79 0.89 0.84 C 0.21 0.11 0.16 0000 --- --- --- --- 085037 00000 ------------ G 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 085447 00000 ------------ A 0.78 0.86 0.82 C 0.22 0.14 0.18 0000 --- --- --- --- 085553 02418 SYNON C 0.74 0.86 0.79 T 0.26 0.14 0.21 0792 GAC GAT ASP(D) ASP(D) 085627 00000 ------------ T 0.78 0.86 0.82 C 0.22 0.14 0.18 0000 --- --- --- --- 085646 00000 ------------ A 0.85 0.86 0.85 T 0.15 0.14 0.15 0000 --- --- --- --- 085675 00000 ------------ C 0.78 0.88 0.83 T 0.22 0.12 0.17 0000 --- --- --- --- 085998 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 086003 00000 ------------ T 0.76 0.70 0.73 A 0.24 0.30 0.27 0000 --- --- --- --- 086083 02526 SYNON G 0.80 0.91 0.86 A 0.20 0.09 0.14 0828 ACG ACA THR(T) THR(T) 086576 00000 ------------ C 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 086701 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 086745 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 086948 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 087158 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 087255 00000 ------------ G 0.56 0.61 0.59 A 0.44 0.39 0.41 0000 --- --- --- --- 087513 00000 ------------ G 0.81 0.88 0.84 C 0.19 0.12 0.16 0000 --- --- --- --- 087602 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 087713 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 087813 00000 ------------ G 0.81 0.86 0.84 T 0.19 0.14 0.16 0000 --- --- --- --- 088025 02760 SYNON G 0.93 1.00 0.97 A 0.07 0.00 0.03 0906 GCG GCA ALA(A) ALA(A) 088790 00000 ------------ - 0.79 0.90 0.84 + 0.21 0.10 0.16 0000 --- --- --- --- 088889 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 089969 00000 ------------ - 0.24 0.11 0.17 + 0.76 0.89 0.83 0000 --- --- --- --- 090029 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 090294 00000 ------------ - 0.95 0.93 0.94 + 0.05 0.07 0.06 0000 --- --- --- --- 090319 00000 ------------ G 0.73 0.73 0.73 A 0.27 0.27 0.27 0000 --- --- --- --- 090510 00000 ------------ T 0.73 0.72 0.72 C 0.27 0.28 0.28 0000 --- --- --- --- 090777 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 090891 00000 ------------ C 0.88 0.78 0.83 T 0.12 0.22 0.17 0000 --- --- --- --- 091169 00000 ------------ T 0.59 0.74 0.66 C 0.41 0.26 0.34 0000 --- --- --- --- 091308 00000 ------------ A 0.83 0.74 0.79 C 0.17 0.26 0.21 0000 --- --- --- --- 091533 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 091609 00000 ------------ - 0.06 0.07 0.07 + 0.94 0.93 0.93 0000 --- --- --- --- 092280 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 092440 00000 ------------ G 0.80 0.89 0.85 A 0.20 0.11 0.15 0000 --- --- --- --- 092463 00000 ------------ A 0.80 0.89 0.85 G 0.20 0.11 0.15 0000 --- --- --- --- 092617* 092638 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 092664 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 092679 00000 ------------ C 0.89 0.86 0.88 A 0.11 0.14 0.12 0000 --- --- --- --- 093008 00000 ------------ C 0.79 0.89 0.84 T 0.21 0.11 0.16 0000 --- --- --- --- 093200 00000 ------------ G 0.81 0.89 0.85 A 0.19 0.11 0.15 0000 --- --- --- --- 093605 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 093901 00000 ------------ G 0.79 0.89 0.84 A 0.21 0.11 0.16 0000 --- --- --- --- 093997 00000 ------------ T 0.82 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 094262 00000 ------------ T 0.95 0.86 0.91 A 0.05 0.14 0.09 0000 --- --- --- --- 094729 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 095376 00000 ------------ G 0.71 0.74 0.72 A 0.29 0.26 0.28 0000 --- --- --- --- 095502 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 095517 00000 ------------ C 0.90 0.83 0.86 T 0.10 0.17 0.14 0000 --- --- --- --- 095753 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 095754 00000 ------------ C 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 095816 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 095933 00000 ------------ - 0.29 0.28 0.29 + 0.71 0.72 0.71 0000 --- --- --- --- 096038 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 096101 00000 ------------ G 0.50 0.63 0.56 A 0.50 0.37 0.44 0000 --- --- --- --- 096359 03294 SYNON C 0.71 0.74 0.72 T 0.29 0.26 0.28 1084 TTC TTT PHE(F) PHE(F) 097707 00000 ------------ - 0.15 0.12 0.14 + 0.85 0.88 0.86 0000 --- --- --- --- 097793 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 098006 00000 ------------ A 0.90 0.85 0.87 T 0.10 0.15 0.13 0000 --- --- --- --- 098184 00000 ------------ T 0.79 0.89 0.84 C 0.21 0.11 0.16 0000 --- --- --- --- 098204 00000 ------------ G 0.79 0.89 0.84 C 0.21 0.11 0.16 0000 --- --- --- --- 098245 00000 ------------ A 0.79 0.89 0.84 C 0.21 0.11 0.16 0000 --- --- --- --- 098247 00000 ------------ C 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 098299 00000 ------------ T 0.94 0.96 0.95 C 0.06 0.04 0.05 0000 --- --- --- --- 099016 00000 ------------ T 0.80 0.91 0.86 C 0.20 0.09 0.14 0000 --- --- --- --- 099689 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 099738 00000 ------------ T 0.81 0.89 0.85 C 0.19 0.11 0.15 0000 --- --- --- --- 099786 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 099831 00000 ------------ A 0.79 0.89 0.84 T 0.21 0.11 0.16 0000 --- --- --- --- 099987 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 100008 00000 ------------ C 0.78 0.89 0.84 T 0.22 0.11 0.16 0000 --- --- --- --- 100045 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 100148 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 100721 00000 ------------ C 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 100801 00000 ------------ C 0.58 0.63 0.61 G 0.42 0.37 0.39 0000 --- --- --- --- 100915 00000 ------------ T 0.52 0.63 0.58 C 0.48 0.37 0.42 0000 --- --- --- --- 101070 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 101088 00000 ------------ A 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 101325 00000 ------------ A 0.82 0.88 0.85 G 0.18 0.12 0.15 0000 --- --- --- --- 101746 00000 ------------ C 0.82 0.62 0.72 G 0.17 0.38 0.28 0000 --- --- --- --- 101843 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 102395 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 102889 03421 NON-SYN A 0.96 1.00 0.98 C 0.04 0.00 0.02 1127 AAA CAA LYS(K) GLN(Q) 103138 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 103314 00000 ------------ C 0.78 0.89 0.84 T 0.22 0.11 0.16 0000 --- --- --- --- 103744 03820 3' UTR - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 103973 04049 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 103985 04061 3' UTR - 0.31 0.29 0.30 + 0.69 0.71 0.70 0000 --- --- --- --- 104194 04270 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 104233 04309 3' UTR C 0.85 0.80 0.83 A 0.15 0.20 0.17 0000 --- --- --- --- 104271 04347 3' UTR - 0.83 0.89 0.86 + 0.17 0.11 0.14 0000 --- --- --- --- 104410 04486 3' UTR T 0.85 0.61 0.73 C 0.15 0.39 0.27 0000 --- --- --- --- 105140 05216 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 105280 00000 ------------ - 0.04 0.06 0.05 + 0.96 0.94 0.95 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006790: AA 021540: TC 028379: A 028823: T 031961: AAAT 032047: A 038873: TAAAA 040059: ATAG 043536: AA 054021: A 055756: A 056153: AGTG 057683: C 062144: CCT 062615: C 063459: C 069069: T 076377: A 076441: T 076599: A 082721: T 083004: TT 083801: T 084171: A 088790: T 089969: AT 090029: CATAAT 090294: A 091609: TAAA 095933: T 097707: TG 103744: G 103985: AAC 104271: ATTT 105280: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 092617 A 0.02 0.00 0.01 C 0.04 0.04 0.04 G 0.94 0.96 0.95 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000100 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 000104 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 000108 00000 ------------ T 0.90 0.96 0.93 G 0.10 0.04 0.07 0000 --- --- --- --- 000147 00000 ------------ T 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 000279 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000385 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001065 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 001161 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001371 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001438 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001509 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001511 00000 ------------ T 0.86 0.78 0.82 C 0.14 0.22 0.18 0000 --- --- --- --- 001724 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 001792 00000 ------------ - 0.81 0.77 0.79 + 0.19 0.23 0.21 0000 --- --- --- --- 001852 00000 ------------ - 0.03 0.23 0.15 + 0.97 0.77 0.85 0000 --- --- --- --- 002099 00000 ------------ G 0.54 0.57 0.55 A 0.46 0.43 0.45 0000 --- --- --- --- 002284 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002385 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 002400 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002417 00000 ------------ T 1.00 0.78 0.90 G 0.00 0.23 0.10 0000 --- --- --- --- 002566 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 002960 00000 ------------ G 0.86 0.78 0.82 C 0.14 0.22 0.18 0000 --- --- --- --- 003158 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003381 00000 ------------ G 0.42 0.59 0.50 A 0.58 0.41 0.50 0000 --- --- --- --- 003449 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003517 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003566 00000 ------------ G 0.98 0.86 0.92 A 0.02 0.14 0.08 0000 --- --- --- --- 003785 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008710 00000 ------------ G 0.85 0.78 0.82 A 0.15 0.22 0.18 0000 --- --- --- --- 032139 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032314 00000 ------------ C 0.82 0.89 0.86 T 0.18 0.11 0.14 0000 --- --- --- --- 032445 00000 ------------ T 0.48 0.89 0.69 C 0.52 0.11 0.31 0000 --- --- --- --- 032549 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033490 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 033707 00000 ------------ A 0.50 0.87 0.68 G 0.50 0.13 0.32 0000 --- --- --- --- 034234 00000 ------------ T 0.80 0.91 0.86 C 0.20 0.09 0.14 0000 --- --- --- --- 034255 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 034334 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 034340 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034357 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034607 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 035174 00000 ------------ C 0.81 0.89 0.85 T 0.19 0.11 0.15 0000 --- --- --- --- 035260 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035555 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035594 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035862 00000 ------------ A 0.58 0.89 0.73 G 0.42 0.11 0.27 0000 --- --- --- --- 036423 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036929 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 036941 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 037470 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 037908 00000 ------------ G 0.80 0.89 0.84 A 0.20 0.11 0.16 0000 --- --- --- --- 037960 00000 ------------ C 0.82 1.00 0.91 T 0.18 0.00 0.09 0000 --- --- --- --- 038235 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 042540 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042606 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 042642 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 042669 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 043046 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 043347 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 043402 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 043431 00000 ------------ - 0.50 0.72 0.61 + 0.50 0.28 0.39 0000 --- --- --- --- 043884 00000 ------------ A 0.80 0.89 0.85 G 0.20 0.11 0.15 0000 --- --- --- --- 043922 00000 ------------ A 0.72 0.89 0.80 G 0.28 0.11 0.20 0000 --- --- --- --- 044010 00646 NON-SYN G 0.91 1.00 0.96 C 0.09 0.00 0.04 0216 GTG CTG VAL(V) LEU(L) 044080 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 044326 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 048102 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 048103 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 048364 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 048532 00000 ------------ C 0.50 0.89 0.69 T 0.50 0.11 0.31 0000 --- --- --- --- 048550 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 048637 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 049207 00000 ------------ G 0.67 1.00 0.84 T 0.33 0.00 0.16 0000 --- --- --- --- 049971 00000 ------------ C 0.35 0.70 0.52 G 0.65 0.30 0.48 0000 --- --- --- --- 050097 00000 ------------ G 0.57 0.70 0.63 A 0.43 0.30 0.37 0000 --- --- --- --- 060100 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 060125 00000 ------------ - 0.07 0.09 0.08 + 0.93 0.91 0.92 0000 --- --- --- --- 060312 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 060410 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 060418 00000 ------------ A 0.94 0.91 0.93 G 0.06 0.09 0.07 0000 --- --- --- --- 060494 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 060505 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 060537 00000 ------------ C 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 060564 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 060646 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 060975 00000 ------------ G 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 061015 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 061053 00000 ------------ T 0.76 0.39 0.58 C 0.24 0.61 0.42 0000 --- --- --- --- 061276 00000 ------------ G 0.98 0.83 0.90 T 0.02 0.17 0.10 0000 --- --- --- --- 061681 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 061801 00000 ------------ C 0.69 0.89 0.79 A 0.31 0.11 0.21 0000 --- --- --- --- 061834 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 061843 00000 ------------ T 0.94 0.91 0.93 G 0.06 0.09 0.07 0000 --- --- --- --- 061922 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 062109 00000 ------------ G 0.69 0.89 0.79 A 0.31 0.11 0.21 0000 --- --- --- --- 062252 00000 ------------ C 0.94 0.91 0.93 G 0.06 0.09 0.07 0000 --- --- --- --- 062265 00000 ------------ G 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 062360 00000 ------------ G 0.38 0.89 0.63 A 0.62 0.11 0.37 0000 --- --- --- --- 062427 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 062546 00000 ------------ T 0.94 0.91 0.93 C 0.06 0.09 0.07 0000 --- --- --- --- 062738 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 062812 00000 ------------ C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 062836 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 063044 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 063119 00000 ------------ - 0.06 0.09 0.07 + 0.94 0.91 0.93 0000 --- --- --- --- 063188 00000 ------------ G 0.65 0.87 0.76 T 0.35 0.13 0.24 0000 --- --- --- --- 066443 00000 ------------ C 0.29 0.78 0.53 T 0.71 0.22 0.47 0000 --- --- --- --- 066462 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 066507 00000 ------------ A 0.31 0.78 0.54 G 0.69 0.22 0.46 0000 --- --- --- --- 066545 00000 ------------ - 0.25 0.00 0.13 + 0.75 1.00 0.87 0000 --- --- --- --- 073623 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 074181 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 074216 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 074244 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 075462 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 075740 00000 ------------ G 0.48 0.65 0.55 C 0.52 0.35 0.45 0000 --- --- --- --- 076279 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 076588 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 076679 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 076690 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 076879 00000 ------------ T 0.91 0.74 0.83 G 0.09 0.26 0.17 0000 --- --- --- --- 077071 00000 ------------ G 0.95 0.93 0.94 T 0.05 0.07 0.06 0000 --- --- --- --- 077283 00000 ------------ A 0.67 1.00 0.84 G 0.33 0.00 0.16 0000 --- --- --- --- 077379 00000 ------------ - 0.20 0.00 0.11 + 0.80 1.00 0.89 0000 --- --- --- --- 077659 00000 ------------ A 0.72 1.00 0.86 T 0.28 0.00 0.14 0000 --- --- --- --- 104484 00000 ------------ A 0.67 1.00 0.83 C 0.33 0.00 0.17 0000 --- --- --- --- 104576 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 104631 00000 ------------ C 0.79 0.61 0.70 T 0.21 0.39 0.30 0000 --- --- --- --- 104747 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 104752 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 104867 00000 ------------ C 0.42 0.87 0.64 G 0.58 0.13 0.36 0000 --- --- --- --- 104900 00000 ------------ - 0.42 0.83 0.62 + 0.58 0.17 0.38 0000 --- --- --- --- 104978 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 104983 00000 ------------ A 0.75 0.83 0.79 G 0.25 0.17 0.21 0000 --- --- --- --- 105046 00000 ------------ C 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 105054 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 105073 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 105345 00000 ------------ G 0.67 1.00 0.83 A 0.33 0.00 0.17 0000 --- --- --- --- 105503 00000 ------------ T 0.67 1.00 0.83 C 0.33 0.00 0.17 0000 --- --- --- --- 105823 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 106190 00000 ------------ A 0.42 0.83 0.62 G 0.58 0.17 0.38 0000 --- --- --- --- 106721 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 106969 00000 ------------ T 0.42 0.83 0.62 C 0.58 0.17 0.38 0000 --- --- --- --- 107370 00000 ------------ G 0.75 0.52 0.64 T 0.25 0.48 0.36 0000 --- --- --- --- 107602 00000 ------------ T 0.75 0.83 0.79 C 0.25 0.17 0.21 0000 --- --- --- --- 107623 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 108102 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 108218 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 108245 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 112335 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 112528 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 112726 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 112859 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 112900 00000 ------------ G 0.63 0.45 0.54 A 0.37 0.55 0.46 0000 --- --- --- --- 113058 00000 ------------ A 0.69 0.52 0.61 C 0.31 0.48 0.39 0000 --- --- --- --- 113168 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 113457 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 113644 00000 ------------ T 0.63 0.82 0.72 G 0.37 0.18 0.28 0000 --- --- --- --- 113747 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 113933 01730 NON-SYN C 0.96 0.98 0.97 T 0.04 0.02 0.03 0577 TCC TTC SER(S) PHE(F) 113945 01742 NON-SYN A 1.00 0.93 0.97 C 0.00 0.07 0.03 0581 CAG CCG GLN(Q) PRO(P) 114378 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 114391 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 114691 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 114949 00000 ------------ A 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 114995 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 115400 00000 ------------ A 0.58 0.85 0.71 G 0.42 0.15 0.29 0000 --- --- --- --- 115533 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 115539 00000 ------------ C 0.94 0.74 0.84 T 0.06 0.26 0.16 0000 --- --- --- --- 116165 00000 ------------ - 0.25 0.48 0.36 + 0.75 0.52 0.64 0000 --- --- --- --- 116249 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 116402 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 116459 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 116992 00000 ------------ C 1.00 0.90 0.95 T 0.00 0.10 0.05 0000 --- --- --- --- 117185 00000 ------------ - 0.07 0.35 0.20 + 0.93 0.65 0.80 0000 --- --- --- --- 117238 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 117418 02100 SYNON A 0.95 1.00 0.98 G 0.05 0.00 0.02 0700 GGA GGG GLY(G) GLY(G) 117517 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 128078 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 128402 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 128439 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 128511 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 128772 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 128801 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 128977 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 129209 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 129371 02243 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0748 CGT CAT ARG(R) HIS(H) 129440 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 129464 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 134269 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 134283 00000 ------------ G 0.61 0.91 0.77 A 0.39 0.09 0.23 0000 --- --- --- --- 134439 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 134667 00000 ------------ G 0.79 1.00 0.90 T 0.21 0.00 0.10 0000 --- --- --- --- 135040 02352 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0784 GTA GTG VAL(V) VAL(V) 135374 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 144562 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 144589 00000 ------------ G 0.92 0.95 0.93 T 0.08 0.05 0.07 0000 --- --- --- --- 144717 00000 ------------ T 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 144748 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 144753 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 144755 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 145164 00000 ------------ T 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 145316 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 145591 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 146198 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 146236 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 146395 00000 ------------ C 0.60 0.93 0.77 G 0.40 0.07 0.23 0000 --- --- --- --- 146407 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 146460 00000 ------------ G 0.60 0.93 0.77 A 0.40 0.07 0.23 0000 --- --- --- --- 146486 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 146492 00000 ------------ C 0.60 0.93 0.77 T 0.40 0.07 0.23 0000 --- --- --- --- 146588 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 146619 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 146726 00000 ------------ A 0.61 0.91 0.76 C 0.39 0.09 0.24 0000 --- --- --- --- 146733 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 146897 00000 ------------ A 0.72 0.93 0.83 G 0.28 0.07 0.17 0000 --- --- --- --- 147062 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 147094 00000 ------------ G 0.72 0.93 0.83 T 0.28 0.07 0.17 0000 --- --- --- --- 147151 00000 ------------ G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 147160 00000 ------------ T 0.59 0.89 0.74 C 0.41 0.11 0.26 0000 --- --- --- --- 147198 00000 ------------ C 1.00 0.89 0.95 T 0.00 0.11 0.05 0000 --- --- --- --- 147624 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 147770 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 147797 00000 ------------ G 0.68 0.95 0.81 A 0.32 0.05 0.19 0000 --- --- --- --- 148117 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 148199 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 148343 00000 ------------ C 0.93 0.65 0.79 G 0.07 0.35 0.21 0000 --- --- --- --- 148367 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 148465 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 148476 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 148598 00000 ------------ A 0.92 0.93 0.93 C 0.08 0.07 0.07 0000 --- --- --- --- 148609 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 149110 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 149617 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 149951 00000 ------------ C 0.62 0.93 0.78 A 0.38 0.07 0.22 0000 --- --- --- --- 149952 00000 ------------ G 0.94 0.65 0.80 C 0.06 0.35 0.20 0000 --- --- --- --- 162909 00000 ------------ A 0.55 0.70 0.62 G 0.45 0.30 0.38 0000 --- --- --- --- 162943* 162974 00000 ------------ T 0.55 0.70 0.62 C 0.45 0.30 0.38 0000 --- --- --- --- 162975 00000 ------------ G 0.55 0.70 0.62 T 0.45 0.30 0.38 0000 --- --- --- --- 163064 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 163114 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 163375 00000 ------------ T 0.90 0.70 0.80 C 0.10 0.30 0.20 0000 --- --- --- --- 163654 00000 ------------ A 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 164094 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 164176 00000 ------------ T 0.75 1.00 0.87 C 0.25 0.00 0.13 0000 --- --- --- --- 171676 00000 ------------ A 0.83 0.91 0.87 C 0.17 0.09 0.13 0000 --- --- --- --- 171728 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 172005 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 172157 00000 ------------ G 0.97 0.89 0.93 A 0.03 0.11 0.07 0000 --- --- --- --- 172161 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 172465 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 172533 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 172555 00000 ------------ C 0.90 0.83 0.86 T 0.10 0.17 0.14 0000 --- --- --- --- 172668 00000 ------------ T 0.83 0.91 0.87 C 0.17 0.09 0.13 0000 --- --- --- --- 172677 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 172730 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 173020 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 173238 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 173239 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 173246 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 173274 00000 ------------ A 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 173294 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 173502 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 173609 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 173610 00000 ------------ A 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 173687 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 173758 00000 ------------ T 0.86 0.90 0.88 C 0.14 0.10 0.12 0000 --- --- --- --- 190232 00000 ------------ A 0.83 0.84 0.84 G 0.17 0.16 0.16 0000 --- --- --- --- 190248 00000 ------------ A 0.69 0.77 0.73 G 0.31 0.23 0.27 0000 --- --- --- --- 190276 00000 ------------ G 0.87 0.84 0.85 C 0.13 0.16 0.15 0000 --- --- --- --- 190280 00000 ------------ C 0.88 0.84 0.86 T 0.12 0.16 0.14 0000 --- --- --- --- 190309 00000 ------------ G 0.83 1.00 0.92 C 0.17 0.00 0.08 0000 --- --- --- --- 190441 00000 ------------ A 0.89 0.84 0.86 G 0.11 0.16 0.14 0000 --- --- --- --- 190592 02977 NON-SYN A 0.95 1.00 0.98 G 0.05 0.00 0.02 0993 ATA GTA ILE(I) VAL(V) 190596 02981 NON-SYN C 0.93 1.00 0.97 T 0.07 0.00 0.03 0994 GCA GTA ALA(A) VAL(V) 191115 00000 ------------ G 0.32 0.77 0.58 A 0.68 0.23 0.42 0000 --- --- --- --- 191146 00000 ------------ C 0.92 0.75 0.83 T 0.08 0.25 0.17 0000 --- --- --- --- 191340 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 201974 00000 ------------ A 0.80 0.24 0.52 G 0.20 0.76 0.48 0000 --- --- --- --- 202061 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 202103 00000 ------------ A 0.87 0.91 0.89 G 0.13 0.09 0.11 0000 --- --- --- --- 202789 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 202840 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 203218 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 203247 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 203475 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 203987 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 203996 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 204091 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 204502 03205 3' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 204654 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 204828 00000 ------------ C 0.60 1.00 0.80 T 0.40 0.00 0.20 0000 --- --- --- --- 205094 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 205452 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 205912 00000 ------------ G 0.95 0.93 0.94 A 0.05 0.07 0.06 0000 --- --- --- --- 205914 00000 ------------ G 0.21 0.76 0.50 A 0.79 0.24 0.50 0000 --- --- --- --- 206240 00000 ------------ G 0.80 0.24 0.51 A 0.20 0.76 0.49 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000100: C 001792: C 001852: GGAG 002566: ATAG 034334: T 043431: CTTTTTATCATT 048103: TTAGCAA 048550: C 060125: AAAGTATGAC 061681: CACAGTTCTGGCAGCCAGAA 062427: A 063119: AT 066545: AA 074216: AT 074244: T 076279: A 077379: TAAAT 104576: ACT 104900: T 105823: A 116165: A 117185: T 146733: T 147624: TA 148465: G 173609: A 173687: AA 204502: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 162943 A 0.12 0.00 0.06 C 0.33 0.30 0.32 T 0.55 0.70 0.62 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000290 00000 ------------ G 0.90 0.83 0.87 A 0.10 0.17 0.13 0000 --- --- --- --- 000370 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 000575 00000 ------------ G 0.50 0.84 0.67 A 0.50 0.16 0.33 0000 --- --- --- --- 000622 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000681 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000784 00000 ------------ G 0.83 0.91 0.87 A 0.17 0.09 0.13 0000 --- --- --- --- 000925 00000 ------------ A 0.50 0.85 0.67 G 0.50 0.15 0.33 0000 --- --- --- --- 000970 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000994 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 001039 00000 ------------ T 1.00 0.93 0.96 C 0.00 0.07 0.04 0000 --- --- --- --- 001051 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 001061 00000 ------------ G 0.97 0.90 0.94 T 0.03 0.10 0.06 0000 --- --- --- --- 001064 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 001467 00000 ------------ G 0.50 0.86 0.70 A 0.50 0.14 0.30 0000 --- --- --- --- 001513 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 001564 00000 ------------ C 0.63 0.88 0.77 A 0.37 0.12 0.23 0000 --- --- --- --- 002579 00000 ------------ C 0.50 0.78 0.64 T 0.50 0.22 0.36 0000 --- --- --- --- 002597 00000 ------------ G 0.35 0.78 0.57 A 0.65 0.22 0.43 0000 --- --- --- --- 002599 00000 ------------ G 0.48 0.78 0.63 A 0.52 0.22 0.37 0000 --- --- --- --- 002653 00000 ------------ C 0.59 0.77 0.68 T 0.41 0.23 0.32 0000 --- --- --- --- 002654 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 003003 -----** SYNON G 0.86 1.00 0.93 C 0.14 0.00 0.07 0099 CTG CTC LEU(L) LEU(L) 003030 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 003076 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 003106 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 003186 00000 ------------ A 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 003187 00000 ------------ C 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 003211 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 003385 -----** NON-SYN C 0.88 1.00 0.94 A 0.12 0.00 0.06 0132 CCA ACA PRO(P) THR(T) 003442 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003451 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 003470 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 003837 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004512 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004922 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 004991 00000 ------------ A 0.91 0.85 0.88 C 0.09 0.15 0.12 0000 --- --- --- --- 005008 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 005195 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 005415 00000 ------------ C 0.96 0.89 0.92 A 0.04 0.11 0.08 0000 --- --- --- --- 005424 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005536 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005609 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005832 00000 ------------ - 0.80 1.00 0.89 + 0.20 0.00 0.11 0000 --- --- --- --- 005852 00000 ------------ C 0.82 0.89 0.85 G 0.18 0.11 0.15 0000 --- --- --- --- 006090 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 006115 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 006181 00000 ------------ - 0.95 1.00 0.97 + 0.05 0.00 0.03 0000 --- --- --- --- 006427 00000 ------------ C 0.96 0.85 0.90 T 0.04 0.15 0.10 0000 --- --- --- --- 006586 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 006931 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 007090 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 007098 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 007450 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 007499 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008143 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 008147 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008401 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008662 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008744 -----** SYNON G 1.00 0.97 0.99 A 0.00 0.03 0.01 0527 CTG CTA LEU(L) LEU(L) 008873 00000 ------------ A 0.79 0.82 0.81 G 0.21 0.17 0.19 0000 --- --- --- --- 008947 00000 ------------ A 0.74 0.98 0.85 G 0.26 0.02 0.15 0000 --- --- --- --- 009091 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009591 -----** SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0570 CTG CTA LEU(L) LEU(L) 009758 00000 ------------ C 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 009811 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 009971 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 010025 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010059 00000 ------------ T 0.67 0.57 0.62 C 0.33 0.43 0.38 0000 --- --- --- --- 010192 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010196 00000 ------------ T 0.50 0.57 0.53 C 0.50 0.43 0.47 0000 --- --- --- --- 010233 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 010411 00000 ------------ A 0.81 0.67 0.74 G 0.19 0.33 0.26 0000 --- --- --- --- 010734 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 011121 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011413 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011552 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 011662 -----** SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0665 CCC CCT PRO(P) PRO(P) 011910 -----** NON-SYN G 1.00 0.95 0.98 A 0.00 0.05 0.02 0722 GTC ATC VAL(V) ILE(I) 012552 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012706 00000 ------------ T 0.67 0.63 0.65 A 0.33 0.37 0.35 0000 --- --- --- --- 013323 00000 ------------ T 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- 014679 00000 ------------ G 0.91 0.87 0.89 A 0.09 0.13 0.11 0000 --- --- --- --- 014784 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014798 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 015236 00000 ------------ G 0.67 0.41 0.54 A 0.33 0.59 0.46 0000 --- --- --- --- 015601 00000 ------------ T 0.56 0.59 0.57 C 0.44 0.41 0.43 0000 --- --- --- --- 015622 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015647 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015669 00000 ------------ T 0.92 0.76 0.84 C 0.08 0.24 0.16 0000 --- --- --- --- 015679 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015780 00000 ------------ C 0.84 0.72 0.78 T 0.16 0.28 0.22 0000 --- --- --- --- 016313 00000 ------------ A 0.57 0.57 0.57 G 0.43 0.43 0.43 0000 --- --- --- --- 016353 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 016434 00000 ------------ G 0.67 0.67 0.67 C 0.33 0.33 0.33 0000 --- --- --- --- 016464 00000 ------------ T 0.67 0.64 0.66 G 0.33 0.36 0.34 0000 --- --- --- --- 016765 00000 ------------ C 0.93 0.74 0.84 T 0.07 0.26 0.16 0000 --- --- --- --- 016791 00000 ------------ C 0.91 0.72 0.82 G 0.09 0.28 0.18 0000 --- --- --- --- 017085 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017298 00000 ------------ T 0.90 0.77 0.84 G 0.10 0.23 0.16 0000 --- --- --- --- 017511 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 017637 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 017708 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017803 00000 ------------ A 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 017806 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017858 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018122 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018183 00000 ------------ - 0.20 0.04 0.12 + 0.80 0.96 0.88 0000 --- --- --- --- 018212 00000 ------------ A 0.75 0.52 0.62 G 0.25 0.48 0.38 0000 --- --- --- --- 018375 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019312 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019424 00000 ------------ C 0.68 0.67 0.68 G 0.32 0.33 0.33 0000 --- --- --- --- 019452 00000 ------------ A 0.95 0.95 0.95 G 0.05 0.05 0.05 0000 --- --- --- --- 019551 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019685 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019825 00000 ------------ G 0.67 0.91 0.80 A 0.33 0.09 0.20 0000 --- --- --- --- 019853 00000 ------------ G 0.62 0.89 0.76 A 0.38 0.11 0.24 0000 --- --- --- --- 020095 -----** 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020182 -----** 3' UTR C 0.71 0.46 0.59 T 0.29 0.54 0.41 0000 --- --- --- --- 020197 -----** 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020248 -----** 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020283 -----** 3' UTR - 0.29 0.09 0.19 + 0.71 0.91 0.81 0000 --- --- --- --- 020507 -----** 3' UTR C 0.58 0.89 0.73 A 0.42 0.11 0.27 0000 --- --- --- --- 020996 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021174 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021256 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000994: C 003030: C 005832: TGTA 006181: T 007090: TGTC 009811: TTAT 010734: C 017637: AAAT 018183: CCCAGGAGTTCAAGACCAGCCTGGGCAACATAGTGAGACCTTGTCTCTACAAACAATACAAGCAATAGCCGGTGTGGTGACATGCACCTGTGGTTTCAGCTACTAGGGAGGCTGAGGCAGGAGGATCACTGGAA 020283: CTCT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000104 00000 ------------ G 0.56 0.93 0.74 A 0.44 0.07 0.26 0000 --- --- --- --- 000206 00000 ------------ A 0.77 0.93 0.85 T 0.23 0.07 0.15 0000 --- --- --- --- 000448 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000642 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000756 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000774 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000777 00000 ------------ G 0.58 0.93 0.76 A 0.42 0.07 0.24 0000 --- --- --- --- 000901 00000 ------------ A 0.59 0.93 0.76 G 0.41 0.07 0.24 0000 --- --- --- --- 000997 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001029 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001069 00000 ------------ C 0.60 0.93 0.77 G 0.40 0.07 0.23 0000 --- --- --- --- 001136 00000 ------------ C 0.59 0.93 0.77 A 0.41 0.07 0.23 0000 --- --- --- --- 001151 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001169 00000 ------------ T 0.48 0.93 0.71 C 0.52 0.07 0.29 0000 --- --- --- --- 001358 00000 ------------ T 0.52 0.96 0.73 C 0.48 0.04 0.27 0000 --- --- --- --- 001679 00000 ------------ T 0.50 0.98 0.73 C 0.50 0.02 0.27 0000 --- --- --- --- 001732 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001817 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001837 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002256 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 002448 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002654 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002675 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003642 00219 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0003 GGT GGC GLY(G) GLY(G) 004248 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004681 00000 ------------ A 0.58 0.96 0.77 G 0.42 0.04 0.23 0000 --- --- --- --- 004821 00000 ------------ G 0.60 0.96 0.78 A 0.40 0.04 0.22 0000 --- --- --- --- 005116 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005789 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005813 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006070 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006112 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 006269 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006286 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 006484 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 006494 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006818 00000 ------------ T 0.80 1.00 0.92 C 0.20 0.00 0.08 0000 --- --- --- --- 006879 00000 ------------ A 0.77 0.98 0.89 G 0.23 0.02 0.11 0000 --- --- --- --- 006907 00000 ------------ G 0.87 1.00 0.95 A 0.13 0.00 0.05 0000 --- --- --- --- 007167 00697 NON-SYN G 0.97 1.00 0.99 A 0.03 0.00 0.01 0163 GCT ACT ALA(A) THR(T) 007263 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007483 00000 ------------ G 0.85 0.98 0.91 C 0.15 0.02 0.09 0000 --- --- --- --- 007499 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 007518 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 007588 00788 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0193 ACG ATG THR(T) MET(M) 008059 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008087 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008222 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 008375 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008952 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009118 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 009172 00000 ------------ T 0.87 0.98 0.92 C 0.13 0.02 0.08 0000 --- --- --- --- 009299 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009733 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009746 00000 ------------ A 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 010141 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010218 00000 ------------ T 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 010409 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010611 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010728 00000 ------------ C 0.65 0.98 0.81 T 0.35 0.02 0.19 0000 --- --- --- --- 010849 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010941 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011242 01051 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0281 CGG TGG ARG(R) TRP(W) 011247 01056 SYNON G 0.96 1.00 0.98 C 0.04 0.00 0.02 0282 CTG CTC LEU(L) LEU(L) 011313 01122 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0304 ATC ATT ILE(I) ILE(I) 011600 01182 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0324 TTC TTT PHE(F) PHE(F) 011760 00000 ------------ G 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 011854 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011931 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 012121 00000 ------------ G 0.77 0.65 0.71 C 0.23 0.35 0.29 0000 --- --- --- --- 013032 00000 ------------ T 0.75 1.00 0.87 C 0.25 0.00 0.13 0000 --- --- --- --- 013037 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013304 00000 ------------ T 0.75 1.00 0.87 C 0.25 0.00 0.13 0000 --- --- --- --- 013894 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 014298 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 014323 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 014876 00000 ------------ G 0.56 0.98 0.76 T 0.44 0.02 0.24 0000 --- --- --- --- 015032 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 015135 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015168 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 015601 00000 ------------ T 0.76 1.00 0.88 C 0.24 0.00 0.12 0000 --- --- --- --- 015774 00000 ------------ - 0.87 1.00 0.93 + 0.13 0.00 0.07 0000 --- --- --- --- 016211 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016653 00000 ------------ A 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 016667 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016819 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016983 00000 ------------ G 0.81 0.98 0.89 A 0.19 0.02 0.11 0000 --- --- --- --- 016999 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017697 00000 ------------ C 0.81 0.98 0.89 T 0.19 0.02 0.11 0000 --- --- --- --- 018230 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 018337 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018373 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018489 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018727 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 018752 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018823 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019124 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 019498 00000 ------------ A 0.44 0.98 0.69 G 0.56 0.02 0.31 0000 --- --- --- --- 019505 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 019612 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 019657 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019686 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019773 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019957 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020001 00000 ------------ T 0.98 0.89 0.93 C 0.02 0.11 0.07 0000 --- --- --- --- 020061 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020226 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 020499 00000 ------------ T 0.85 0.98 0.91 C 0.15 0.02 0.09 0000 --- --- --- --- 020680 00000 ------------ C 0.85 0.98 0.91 G 0.15 0.02 0.09 0000 --- --- --- --- 020930 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020994 00000 ------------ - 0.85 0.98 0.91 + 0.15 0.02 0.09 0000 --- --- --- --- 021049 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 021218 00000 ------------ T 0.44 0.98 0.70 C 0.56 0.02 0.30 0000 --- --- --- --- 021276 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021380 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 021390 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021393 00000 ------------ A 0.85 0.98 0.91 G 0.15 0.02 0.09 0000 --- --- --- --- 021411 00000 ------------ A 0.81 0.98 0.89 G 0.19 0.02 0.11 0000 --- --- --- --- 021513 00000 ------------ C 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 021684 01756 SYNON C 0.96 1.00 0.98 A 0.04 0.00 0.02 0516 CGA AGA ARG(R) ARG(R) 021913 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022004 01890 SYNON A 0.88 0.98 0.92 C 0.12 0.02 0.08 0560 CCA CCC PRO(P) PRO(P) 022323 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 022487 02000 NON-SYN T 0.94 1.00 0.97 C 0.06 0.00 0.03 0597 CTC CCC LEU(L) PRO(P) 022596 02109 SYNON A 0.81 1.00 0.90 G 0.19 0.00 0.10 0633 TTA TTG LEU(L) LEU(L) 022754 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 022831 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022870 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 023171 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023279 00000 ------------ A 0.79 0.67 0.73 G 0.21 0.33 0.27 0000 --- --- --- --- 023316 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 023445 00000 ------------ A 0.48 0.98 0.73 G 0.52 0.02 0.27 0000 --- --- --- --- 023556 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023903 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 024043 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024238 02386 NON-SYN T 0.98 1.00 0.99 G 0.02 0.00 0.01 0726 TCC GCC SER(S) ALA(A) 024622 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 024629 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024888 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024967 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 025242 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025729 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006484: ATCA 013894: TT 014298: AAG 015774: A 020994: ACT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000083 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000155 00000 ------------ + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 000169 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000581 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001026 00000 ------------ A 0.93 0.98 0.95 C 0.07 0.02 0.05 0000 --- --- --- --- 001064 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 001504 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001562 00000 ------------ G 0.93 0.70 0.82 A 0.07 0.30 0.18 0000 --- --- --- --- 001641 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001687 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001810 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001915 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002002 00000 ------------ G 0.89 0.98 0.93 A 0.11 0.02 0.07 0000 --- --- --- --- 002205 00000 ------------ T 0.68 0.67 0.68 C 0.32 0.33 0.33 0000 --- --- --- --- 002529 00000 ------------ A 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 002588 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 002765 00000 ------------ G 0.88 0.97 0.93 T 0.12 0.03 0.07 0000 --- --- --- --- 003123 00000 ------------ A 0.94 1.00 0.98 G 0.06 0.00 0.02 0000 --- --- --- --- 003451 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 003547 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003734 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 003930 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 003939 00000 ------------ G 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 004001 00000 ------------ C 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 004111 00000 ------------ C 0.67 0.65 0.66 G 0.33 0.35 0.34 0000 --- --- --- --- 004191 00000 ------------ A 0.61 0.65 0.63 G 0.39 0.35 0.37 0000 --- --- --- --- 004378 00000 ------------ + 0.09 0.27 0.19 - 0.91 0.73 0.81 0000 --- --- --- --- 004662 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004733 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004795 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005681 00000 ------------ + 0.07 0.00 0.04 - 0.93 1.00 0.96 0000 --- --- --- --- 005810 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006232 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 006353 00000 ------------ C 0.76 0.69 0.73 T 0.24 0.31 0.27 0000 --- --- --- --- 006387 00000 ------------ C 0.90 0.97 0.94 G 0.10 0.03 0.06 0000 --- --- --- --- 006419 00000 ------------ C 0.76 0.66 0.71 A 0.24 0.34 0.29 0000 --- --- --- --- 006567 00000 ------------ G 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 006624 00266 NON-SYN G 0.95 0.98 0.96 A 0.05 0.02 0.04 0077 CGC CAC ARG(R) HIS(H) 006799 00441 SYNON C 0.73 0.64 0.69 T 0.27 0.36 0.31 0135 GAC GAT ASP(D) ASP(D) 006827 00469 NON-SYN C 0.61 0.64 0.63 G 0.39 0.36 0.37 0145 CAG GAG GLN(Q) GLU(E) 006922 00000 ------------ G 0.92 0.98 0.94 A 0.08 0.02 0.06 0000 --- --- --- --- 006939 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 007068 00592 NON-SYN A 0.85 0.70 0.78 G 0.15 0.30 0.22 0186 AAA GAA LYS(K) GLU(E) 007079 00603 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0189 CAC CAT HIS(H) HIS(H) 007200 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007209 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007421 00000 ------------ G 0.93 0.72 0.83 A 0.07 0.28 0.17 0000 --- --- --- --- 007464 00000 ------------ A 0.89 0.72 0.81 G 0.11 0.28 0.19 0000 --- --- --- --- 007486 00000 ------------ A 0.95 0.73 0.84 T 0.05 0.27 0.16 0000 --- --- --- --- 007508 00000 ------------ A 0.95 0.72 0.83 G 0.05 0.28 0.17 0000 --- --- --- --- 007510 00000 ------------ G 0.95 0.72 0.83 T 0.05 0.28 0.17 0000 --- --- --- --- 007988 00000 ------------ A 0.90 0.68 0.79 G 0.10 0.32 0.21 0000 --- --- --- --- 008026 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008030 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008089 00000 ------------ G 0.48 0.62 0.55 A 0.52 0.38 0.45 0000 --- --- --- --- 008339 00000 ------------ C 0.77 0.75 0.76 T 0.23 0.25 0.24 0000 --- --- --- --- 008347 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008381 00000 ------------ + 0.62 0.64 0.63 - 0.38 0.36 0.37 0000 --- --- --- --- 008515 00000 ------------ C 0.89 0.97 0.93 T 0.11 0.03 0.07 0000 --- --- --- --- 008529 00000 ------------ C 0.68 0.53 0.59 T 0.32 0.47 0.41 0000 --- --- --- --- 008628 00000 ------------ T 0.93 0.98 0.96 C 0.07 0.02 0.04 0000 --- --- --- --- 008817 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 009085 00000 ------------ G 0.97 0.93 0.95 A 0.03 0.07 0.05 0000 --- --- --- --- 009345 00000 ------------ T 0.88 0.96 0.92 C 0.12 0.04 0.08 0000 --- --- --- --- 009388 00000 ------------ + 0.73 0.65 0.69 - 0.27 0.35 0.31 0000 --- --- --- --- 009460 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 009535 00000 ------------ G 0.58 0.52 0.55 A 0.42 0.48 0.45 0000 --- --- --- --- 009639 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 009735 00000 ------------ C 0.74 0.38 0.58 A 0.26 0.62 0.42 0000 --- --- --- --- 009762 00000 ------------ C 0.69 0.67 0.68 T 0.31 0.33 0.32 0000 --- --- --- --- 009892 00000 ------------ + 0.94 0.87 0.90 - 0.06 0.13 0.10 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000155: C 004378: A 005681: TC 008381: AGCGGGTGGAGAGTGGCTTCAGGGTGTGGCCTGCGAAGGCTG 009388: GA 009892: CTCA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000075 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 001013 00000 ------------ C 0.82 0.57 0.69 T 0.18 0.43 0.31 0000 --- --- --- --- 001075 00000 ------------ T 0.64 0.50 0.57 G 0.36 0.50 0.43 0000 --- --- --- --- 001329 00000 ------------ T 0.70 0.45 0.58 C 0.30 0.55 0.42 0000 --- --- --- --- 001417 00000 ------------ C 1.00 0.84 0.92 T 0.00 0.16 0.08 0000 --- --- --- --- 002143 00000 ------------ - 0.96 0.96 0.96 + 0.04 0.04 0.04 0000 --- --- --- --- 002176 00000 ------------ T 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 002483 00000 ------------ A 0.62 0.50 0.56 G 0.38 0.50 0.44 0000 --- --- --- --- 003253 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003421 00000 ------------ G 0.73 0.50 0.62 A 0.27 0.50 0.38 0000 --- --- --- --- 003649 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 003653 00000 ------------ T 0.74 0.50 0.62 A 0.26 0.50 0.38 0000 --- --- --- --- 003749 00000 ------------ T 0.72 0.63 0.67 C 0.28 0.37 0.33 0000 --- --- --- --- 004003 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 005085 00000 ------------ T 0.65 0.50 0.57 C 0.35 0.50 0.43 0000 --- --- --- --- 005270 00000 ------------ T 0.62 0.50 0.56 A 0.38 0.50 0.44 0000 --- --- --- --- 005311 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005601 00000 ------------ C 0.62 0.50 0.56 T 0.38 0.50 0.44 0000 --- --- --- --- 006454 00000 ------------ T 1.00 0.85 0.93 C 0.00 0.15 0.07 0000 --- --- --- --- 006718 00000 ------------ A 0.83 0.57 0.70 C 0.17 0.43 0.30 0000 --- --- --- --- 006729 00000 ------------ C 0.63 0.50 0.57 T 0.37 0.50 0.43 0000 --- --- --- --- 006803 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 006940 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007025 00000 ------------ T 1.00 0.84 0.92 C 0.00 0.16 0.08 0000 --- --- --- --- 007216 00000 ------------ - 0.38 0.54 0.46 + 0.62 0.46 0.54 0000 --- --- --- --- 007369 00000 ------------ A 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 007631 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007671 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 007803 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 007818 00000 ------------ T 0.98 0.85 0.91 C 0.02 0.15 0.09 0000 --- --- --- --- 008433 00000 ------------ A 0.59 0.52 0.56 G 0.41 0.48 0.44 0000 --- --- --- --- 008733 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 008754 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 008964 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008985 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009241 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 009248 00000 ------------ T 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 009418 00000 ------------ G 0.89 0.70 0.80 C 0.11 0.30 0.20 0000 --- --- --- --- 009609 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 009960 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 010102 00000 ------------ T 0.70 0.50 0.59 C 0.30 0.50 0.41 0000 --- --- --- --- 010420 00000 ------------ G 0.63 0.50 0.57 T 0.37 0.50 0.43 0000 --- --- --- --- 010996 00499 NON-SYN A 0.65 0.55 0.59 G 0.35 0.45 0.41 0143 AAT AGT ASN(N) SER(S) 011395 00000 ------------ A 0.91 0.63 0.77 G 0.09 0.37 0.23 0000 --- --- --- --- 011435 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011470 00000 ------------ T 0.61 0.50 0.55 C 0.39 0.50 0.45 0000 --- --- --- --- 011884 00000 ------------ C 0.63 0.50 0.57 G 0.37 0.50 0.43 0000 --- --- --- --- 012113 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012163 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012244 00000 ------------ C 0.81 0.57 0.69 G 0.19 0.43 0.31 0000 --- --- --- --- 012402 00590 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0173 GGA GGG GLY(G) GLY(G) 012415 00603 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0178 GCT ACT ALA(A) THR(T) 012562 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 012631 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012641 00000 ------------ T 0.98 0.97 0.98 G 0.02 0.03 0.02 0000 --- --- --- --- 012651 00000 ------------ T 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 013043 00000 ------------ T 0.69 0.65 0.67 C 0.31 0.35 0.33 0000 --- --- --- --- 014788 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014829 00000 ------------ C 0.92 1.00 0.95 T 0.08 0.00 0.05 0000 --- --- --- --- 014884 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015010 00000 ------------ G 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 015039 00000 ------------ C 0.92 0.88 0.90 G 0.08 0.12 0.10 0000 --- --- --- --- 015089 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016125 00000 ------------ A 0.93 0.85 0.89 G 0.07 0.15 0.11 0000 --- --- --- --- 016129 00000 ------------ - 0.09 0.02 0.05 + 0.91 0.98 0.95 0000 --- --- --- --- 016154 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016163 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016258 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 016268 00000 ------------ - 0.27 0.22 0.24 + 0.73 0.78 0.76 0000 --- --- --- --- 016331 00000 ------------ C 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 016332 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 016376 00000 ------------ A 0.64 0.63 0.64 T 0.36 0.37 0.36 0000 --- --- --- --- 016433 00000 ------------ - 0.18 0.10 0.14 + 0.82 0.90 0.86 0000 --- --- --- --- 016473 00000 ------------ C 0.83 0.78 0.80 T 0.17 0.22 0.20 0000 --- --- --- --- 016519 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016574 00000 ------------ T 0.59 0.50 0.54 G 0.41 0.50 0.46 0000 --- --- --- --- 016576 00000 ------------ T 0.59 0.50 0.54 C 0.41 0.50 0.46 0000 --- --- --- --- 016588 00000 ------------ G 0.65 0.65 0.65 C 0.35 0.35 0.35 0000 --- --- --- --- 016614 00000 ------------ G 0.88 0.72 0.80 T 0.12 0.28 0.20 0000 --- --- --- --- 016694 00000 ------------ T 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 016821 00000 ------------ G 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 016843 00000 ------------ A 0.88 0.72 0.80 G 0.12 0.28 0.20 0000 --- --- --- --- 016985 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 017030 00000 ------------ A 0.72 0.63 0.67 G 0.28 0.37 0.33 0000 --- --- --- --- 017031 00000 ------------ T 0.72 0.63 0.67 C 0.28 0.37 0.33 0000 --- --- --- --- 017256 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017308 00000 ------------ - 0.08 0.04 0.06 + 0.92 0.96 0.94 0000 --- --- --- --- 017311 00000 ------------ A 0.72 0.57 0.65 G 0.28 0.43 0.35 0000 --- --- --- --- 017332 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017361 00000 ------------ T 0.65 0.55 0.60 C 0.35 0.45 0.40 0000 --- --- --- --- 017386 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 017603 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017685 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 017922 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 018039 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 018173 00000 ------------ C 0.60 0.60 0.60 T 0.40 0.40 0.40 0000 --- --- --- --- 018488 00000 ------------ A 0.83 0.95 0.90 G 0.17 0.05 0.10 0000 --- --- --- --- 018507 00000 ------------ G 0.93 0.84 0.89 A 0.07 0.16 0.11 0000 --- --- --- --- 019764 00000 ------------ C 0.76 0.46 0.61 G 0.24 0.54 0.39 0000 --- --- --- --- 019809 00000 ------------ G 0.73 0.43 0.59 A 0.27 0.57 0.41 0000 --- --- --- --- 019860 00000 ------------ C 0.90 0.87 0.88 T 0.10 0.13 0.12 0000 --- --- --- --- 020006 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020070 00000 ------------ A 0.72 0.91 0.82 C 0.28 0.09 0.18 0000 --- --- --- --- 020496 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020519 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021405 00000 ------------ C 0.92 0.93 0.92 T 0.08 0.07 0.08 0000 --- --- --- --- 021704 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021749 00000 ------------ A 0.79 0.75 0.77 T 0.21 0.25 0.23 0000 --- --- --- --- 021833 00000 ------------ A 0.90 0.84 0.87 G 0.10 0.16 0.13 0000 --- --- --- --- 022090 00000 ------------ C 0.83 0.61 0.73 T 0.17 0.39 0.27 0000 --- --- --- --- 022134 00000 ------------ T 0.50 0.52 0.51 C 0.50 0.48 0.49 0000 --- --- --- --- 022149 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 022233 00000 ------------ G 0.77 0.75 0.76 A 0.23 0.25 0.24 0000 --- --- --- --- 022436 00000 ------------ G 0.90 0.95 0.92 A 0.10 0.05 0.08 0000 --- --- --- --- 022617 00000 ------------ G 0.60 0.64 0.62 A 0.40 0.36 0.38 0000 --- --- --- --- 023189 00000 ------------ A 0.81 0.63 0.72 G 0.19 0.37 0.28 0000 --- --- --- --- 023512 00000 ------------ T 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 023714 00000 ------------ C 0.89 0.64 0.77 T 0.11 0.36 0.23 0000 --- --- --- --- 023960 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023961 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024023 00000 ------------ - 0.93 0.84 0.89 + 0.07 0.16 0.11 0000 --- --- --- --- 024323 00000 ------------ G 0.81 0.72 0.77 A 0.19 0.28 0.23 0000 --- --- --- --- 024372 00677 NON-SYN C 0.94 1.00 0.97 A 0.06 0.00 0.03 0202 CAC CAA HIS(H) GLN(Q) 024902 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 024988 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025248 00000 ------------ G 0.80 0.59 0.69 A 0.20 0.41 0.31 0000 --- --- --- --- 025322 00000 ------------ - 0.76 0.57 0.67 + 0.24 0.42 0.33 0000 --- --- --- --- 025389 00877 NON-SYN C 0.96 1.00 0.98 G 0.04 0.00 0.02 0269 TCT TGT SER(S) CYS(C) 025672 01002 NON-SYN T 0.94 1.00 0.97 G 0.06 0.00 0.03 0311 TTT GTT PHE(F) VAL(V) 025834 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025912 01143 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0358 ACT GCT THR(T) ALA(A) 025981 01212 NON-SYN T 0.91 0.96 0.93 G 0.09 0.04 0.07 0381 TCT GCT SER(S) ALA(A) 026009 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026457 00000 ------------ A 1.00 0.84 0.92 G 0.00 0.16 0.08 0000 --- --- --- --- 026515 00000 ------------ G 0.83 0.66 0.74 A 0.17 0.34 0.26 0000 --- --- --- --- 026540 00000 ------------ G 0.80 0.61 0.70 C 0.20 0.39 0.30 0000 --- --- --- --- 026660 00000 ------------ A 0.80 0.59 0.69 G 0.20 0.41 0.31 0000 --- --- --- --- 026999 00000 ------------ G 0.81 0.91 0.86 T 0.19 0.09 0.14 0000 --- --- --- --- 027224 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 027263 00000 ------------ T 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 027332 00000 ------------ A 0.83 0.61 0.73 C 0.17 0.39 0.27 0000 --- --- --- --- 027414 00000 ------------ - 0.06 0.12 0.09 + 0.94 0.88 0.91 0000 --- --- --- --- 027437 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027484 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 027652 00000 ------------ G 0.53 0.55 0.54 A 0.47 0.45 0.46 0000 --- --- --- --- 027767 00000 ------------ - 0.48 0.38 0.43 + 0.52 0.62 0.57 0000 --- --- --- --- 027949 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 028102 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 028147 00000 ------------ G 0.53 0.65 0.60 A 0.47 0.35 0.40 0000 --- --- --- --- 028205 00000 ------------ C 0.90 0.93 0.92 T 0.10 0.07 0.08 0000 --- --- --- --- 028427 00000 ------------ C 0.75 0.91 0.83 T 0.25 0.09 0.17 0000 --- --- --- --- 028692 00000 ------------ T 0.77 0.59 0.68 A 0.23 0.41 0.32 0000 --- --- --- --- 028723 01396 NON-SYN A 1.00 0.98 0.99 C 0.00 0.02 0.01 0442 CAG CCG GLN(Q) PRO(P) 029291 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029573 00000 ------------ C 0.94 0.85 0.89 T 0.06 0.15 0.11 0000 --- --- --- --- 029579 00000 ------------ T 0.94 0.85 0.89 C 0.06 0.15 0.11 0000 --- --- --- --- 029596 00000 ------------ C 0.83 0.63 0.73 T 0.17 0.37 0.27 0000 --- --- --- --- 029743 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029785 00000 ------------ A 0.94 0.85 0.89 C 0.06 0.15 0.11 0000 --- --- --- --- 029804 00000 ------------ C 0.80 0.72 0.76 T 0.20 0.28 0.24 0000 --- --- --- --- 029808 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029829 00000 ------------ G 0.94 0.85 0.89 A 0.06 0.15 0.11 0000 --- --- --- --- 030695 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030760 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030784 00000 ------------ A 0.70 0.87 0.78 G 0.30 0.13 0.22 0000 --- --- --- --- 030984 00000 ------------ A 0.76 0.61 0.68 T 0.24 0.39 0.32 0000 --- --- --- --- 031095 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 031270 00000 ------------ T 0.80 0.59 0.70 C 0.20 0.41 0.30 0000 --- --- --- --- 031443 01750 NON-SYN G 0.80 0.91 0.86 A 0.20 0.09 0.14 0560 CGG CAG ARG(R) GLN(Q) 031569 00000 ------------ T 0.79 0.72 0.75 C 0.21 0.28 0.25 0000 --- --- --- --- 031583 00000 ------------ T 0.57 0.63 0.60 A 0.43 0.37 0.40 0000 --- --- --- --- 031758 00000 ------------ - 0.47 0.50 0.49 + 0.53 0.50 0.51 0000 --- --- --- --- 031761 00000 ------------ G 0.53 0.65 0.60 A 0.47 0.35 0.40 0000 --- --- --- --- 031933 00000 ------------ A 0.95 0.84 0.89 G 0.05 0.16 0.11 0000 --- --- --- --- 031981 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 032040 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 032110 00000 ------------ T 1.00 0.85 0.93 C 0.00 0.15 0.07 0000 --- --- --- --- 032185 01832 SYNON C 0.58 0.65 0.62 T 0.42 0.35 0.38 0587 AAC AAT ASN(N) ASN(N) 032461 02108 3' UTR G 0.92 0.88 0.90 A 0.08 0.12 0.10 0000 --- --- --- --- 032653 00000 ------------ C 0.70 0.81 0.75 T 0.30 0.19 0.25 0000 --- --- --- --- 032739 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032778 00000 ------------ C 0.65 0.65 0.65 T 0.35 0.35 0.35 0000 --- --- --- --- 032961 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033090 00000 ------------ G 0.65 0.74 0.69 A 0.35 0.26 0.31 0000 --- --- --- --- 033147 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002143: A 007216: AA 007803: A 009609: C 016129: T 016268: G 016433: CT 017308: G 017922: G 024023: A 024902: T 025322: T 025834: T 027414: GTTTT 027767: T 027949: TATTT 031758: TTT 032040: TG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000074 00000 ------------ T 0.56 0.78 0.67 C 0.44 0.22 0.33 0000 --- --- --- --- 000217 00000 ------------ G 0.56 0.78 0.67 T 0.44 0.22 0.33 0000 --- --- --- --- 000306 00000 ------------ T 0.56 0.78 0.67 C 0.44 0.22 0.33 0000 --- --- --- --- 000323 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000612 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 000634 00000 ------------ T 0.56 0.78 0.67 C 0.44 0.22 0.33 0000 --- --- --- --- 000702 00000 ------------ T 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 000892 00000 ------------ A 0.56 0.78 0.67 G 0.44 0.22 0.33 0000 --- --- --- --- 001016 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001185 00079 SYNON G 0.56 0.78 0.67 A 0.44 0.22 0.33 0013 CTG CTA LEU(L) LEU(L) 002213 00000 ------------ A 0.62 0.78 0.70 G 0.38 0.22 0.30 0000 --- --- --- --- 002318 00000 ------------ T 0.62 0.78 0.70 A 0.38 0.22 0.30 0000 --- --- --- --- 002419 00000 ------------ T 0.62 0.78 0.70 C 0.38 0.22 0.30 0000 --- --- --- --- 002733 00000 ------------ C 0.62 0.80 0.71 T 0.38 0.20 0.29 0000 --- --- --- --- 003111 00000 ------------ A 0.54 0.72 0.63 G 0.46 0.28 0.37 0000 --- --- --- --- 003115 00000 ------------ C 0.54 0.72 0.63 T 0.46 0.28 0.37 0000 --- --- --- --- 003157 00000 ------------ T 0.37 0.72 0.54 C 0.63 0.28 0.46 0000 --- --- --- --- 003192 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 003200 00000 ------------ G 0.52 0.72 0.62 A 0.48 0.28 0.38 0000 --- --- --- --- 003476 00000 ------------ G 0.54 0.72 0.63 C 0.46 0.28 0.37 0000 --- --- --- --- 003759 00286 SYNON T 0.98 0.93 0.96 C 0.02 0.07 0.04 0082 GAT GAC ASP(D) ASP(D) 003852 00000 ------------ T 0.83 0.85 0.84 C 0.17 0.15 0.16 0000 --- --- --- --- 004129 00000 ------------ G 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 004143 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004161 00000 ------------ C 0.52 0.72 0.62 T 0.48 0.28 0.38 0000 --- --- --- --- 004208 00000 ------------ G 0.52 0.72 0.62 A 0.48 0.28 0.38 0000 --- --- --- --- 004297 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004350 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004369 00000 ------------ A 0.69 0.87 0.78 G 0.31 0.13 0.22 0000 --- --- --- --- 004465 00000 ------------ G 0.52 0.68 0.60 A 0.48 0.32 0.40 0000 --- --- --- --- 004489 00000 ------------ A 0.50 0.70 0.60 G 0.50 0.30 0.40 0000 --- --- --- --- 004545 00000 ------------ A 0.50 0.72 0.61 G 0.50 0.28 0.39 0000 --- --- --- --- 004546 00000 ------------ C 0.52 0.72 0.62 T 0.48 0.28 0.38 0000 --- --- --- --- 004586 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 004636 00000 ------------ C 0.80 0.85 0.83 G 0.20 0.15 0.17 0000 --- --- --- --- 004641 00000 ------------ T 0.50 0.70 0.61 C 0.50 0.30 0.39 0000 --- --- --- --- 004653 00000 ------------ T 0.48 0.70 0.59 C 0.52 0.30 0.41 0000 --- --- --- --- 004685 00000 ------------ A 0.59 0.75 0.67 G 0.41 0.25 0.33 0000 --- --- --- --- 004752 00000 ------------ C 0.52 0.72 0.62 A 0.48 0.28 0.38 0000 --- --- --- --- 004810 00000 ------------ A 0.52 0.72 0.62 C 0.48 0.28 0.38 0000 --- --- --- --- 004990 00000 ------------ T 0.54 0.78 0.66 C 0.46 0.22 0.34 0000 --- --- --- --- 005112 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 005190 00000 ------------ T 0.52 0.72 0.62 C 0.48 0.28 0.38 0000 --- --- --- --- 005346 00000 ------------ C 0.52 0.72 0.62 T 0.48 0.28 0.38 0000 --- --- --- --- 005352 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005435 00000 ------------ A 0.52 0.72 0.62 G 0.48 0.28 0.38 0000 --- --- --- --- 005540 00000 ------------ A 0.69 0.87 0.78 C 0.31 0.13 0.22 0000 --- --- --- --- 005606 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005657 00000 ------------ G 0.52 0.72 0.62 A 0.48 0.28 0.38 0000 --- --- --- --- 005704 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005775 00000 ------------ G 0.88 1.00 0.93 A 0.12 0.00 0.07 0000 --- --- --- --- 005809 00000 ------------ T 0.52 0.72 0.62 C 0.48 0.28 0.38 0000 --- --- --- --- 005909 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 005958 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006054 00364 SYNON G 0.79 0.70 0.74 A 0.21 0.30 0.26 0108 ACG ACA THR(T) THR(T) 006294 00000 ------------ C 0.72 0.59 0.65 T 0.28 0.41 0.35 0000 --- --- --- --- 006370 00000 ------------ C 0.83 0.85 0.84 T 0.17 0.15 0.16 0000 --- --- --- --- 006417 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006729 00000 ------------ - 0.70 0.68 0.69 + 0.30 0.32 0.31 0000 --- --- --- --- 006798 00000 ------------ G 0.58 0.54 0.56 A 0.42 0.46 0.44 0000 --- --- --- --- 006840 00000 ------------ G 0.58 0.54 0.56 T 0.42 0.46 0.44 0000 --- --- --- --- 006887 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 007064 00000 ------------ T 0.54 0.57 0.55 C 0.46 0.43 0.45 0000 --- --- --- --- 007366 00000 ------------ - 0.29 0.15 0.23 + 0.71 0.85 0.77 0000 --- --- --- --- 007391 00000 ------------ G 0.71 0.85 0.78 A 0.29 0.15 0.22 0000 --- --- --- --- 007416 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007575 00000 ------------ T 0.83 0.85 0.84 C 0.17 0.15 0.16 0000 --- --- --- --- 007635 00000 ------------ G 0.72 0.61 0.67 A 0.28 0.39 0.33 0000 --- --- --- --- 007828 00000 ------------ T 0.56 0.45 0.51 A 0.44 0.55 0.49 0000 --- --- --- --- 007846 00000 ------------ A 0.85 0.85 0.85 G 0.15 0.15 0.15 0000 --- --- --- --- 007974 00000 ------------ A 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 008021 00000 ------------ T 0.56 0.42 0.50 C 0.44 0.58 0.50 0000 --- --- --- --- 008111 00000 ------------ T 0.56 0.42 0.50 C 0.44 0.57 0.50 0000 --- --- --- --- 008130 00000 ------------ T 0.44 0.58 0.50 C 0.56 0.42 0.50 0000 --- --- --- --- 008263 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008356 00000 ------------ G 0.73 0.61 0.67 C 0.27 0.39 0.33 0000 --- --- --- --- 008424 00000 ------------ T 0.56 0.48 0.52 C 0.44 0.52 0.48 0000 --- --- --- --- 008517 00000 ------------ G 0.58 0.42 0.51 A 0.42 0.57 0.49 0000 --- --- --- --- 008519 00000 ------------ T 0.44 0.62 0.52 C 0.56 0.38 0.48 0000 --- --- --- --- 008559 00000 ------------ G 0.44 0.62 0.52 C 0.56 0.38 0.48 0000 --- --- --- --- 008645 00000 ------------ G 0.44 0.66 0.53 C 0.56 0.34 0.47 0000 --- --- --- --- 008784 00527 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0163 GGC AGC GLY(G) SER(S) 008830 00573 NON-SYN T 0.44 0.62 0.52 C 0.56 0.38 0.48 0178 ATG ACG MET(M) THR(T) 008942 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 009922 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 009923 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 009933 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 009996 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010021 00000 ------------ C 0.83 0.85 0.84 T 0.17 0.15 0.16 0000 --- --- --- --- 010185 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010264 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 010472 00000 ------------ G 0.85 0.84 0.84 A 0.15 0.16 0.16 0000 --- --- --- --- 010924 00675 NON-SYN T 0.97 1.00 0.99 C 0.03 0.00 0.01 0212 CTG CCG LEU(L) PRO(P) 011015 00000 ------------ - 0.82 0.88 0.84 + 0.18 0.12 0.16 0000 --- --- --- --- 011066 00000 ------------ A 0.85 0.88 0.86 C 0.15 0.12 0.14 0000 --- --- --- --- 011180 00000 ------------ T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 011265 00000 ------------ C 0.65 0.64 0.64 T 0.35 0.36 0.36 0000 --- --- --- --- 011395 00000 ------------ A 0.75 0.86 0.80 G 0.25 0.14 0.20 0000 --- --- --- --- 011583 00000 ------------ C 0.75 0.85 0.80 T 0.25 0.15 0.20 0000 --- --- --- --- 011814 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011916 00000 ------------ T 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 012058 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012415 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012572 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012823 00000 ------------ A 0.97 0.98 0.98 C 0.03 0.02 0.02 0000 --- --- --- --- 012876 00000 ------------ A 0.58 0.65 0.62 C 0.42 0.35 0.38 0000 --- --- --- --- 013324 00000 ------------ G 0.63 0.71 0.67 C 0.37 0.29 0.33 0000 --- --- --- --- 013348 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013356 00000 ------------ G 0.65 0.72 0.68 A 0.35 0.28 0.32 0000 --- --- --- --- 013385 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013417 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 013660 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 013989 00000 ------------ T 0.82 0.75 0.79 C 0.17 0.25 0.21 0000 --- --- --- --- 014253 00000 ------------ C 0.58 0.61 0.60 T 0.42 0.39 0.40 0000 --- --- --- --- 014376 00000 ------------ - 0.39 0.28 0.34 + 0.61 0.72 0.66 0000 --- --- --- --- 014527 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 014611 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 014708 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 014769 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 014902 00000 ------------ A 0.92 0.89 0.90 G 0.08 0.11 0.10 0000 --- --- --- --- 014903 00000 ------------ T 0.65 0.72 0.68 C 0.35 0.28 0.32 0000 --- --- --- --- 014974 00000 ------------ A 0.65 0.72 0.68 G 0.35 0.28 0.32 0000 --- --- --- --- 014978 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 015047 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015362 00000 ------------ G 0.65 0.70 0.67 C 0.35 0.30 0.33 0000 --- --- --- --- 015664 00000 ------------ C 0.65 0.79 0.70 T 0.35 0.21 0.30 0000 --- --- --- --- 015670 00000 ------------ G 0.65 0.72 0.68 C 0.35 0.28 0.32 0000 --- --- --- --- 015696 00000 ------------ T 0.68 0.78 0.72 C 0.33 0.22 0.28 0000 --- --- --- --- 015849 00000 ------------ T 0.63 0.72 0.68 C 0.37 0.28 0.32 0000 --- --- --- --- 015969 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 016541 00000 ------------ G 0.52 0.67 0.60 A 0.48 0.33 0.40 0000 --- --- --- --- 016585 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 016643 00000 ------------ T 0.91 0.89 0.90 C 0.09 0.11 0.10 0000 --- --- --- --- 016675 00000 ------------ C 0.82 0.67 0.74 T 0.17 0.33 0.26 0000 --- --- --- --- 016686 00000 ------------ A 1.00 0.91 0.95 G 0.00 0.09 0.05 0000 --- --- --- --- 016838 00000 ------------ - 0.56 0.41 0.49 + 0.44 0.59 0.51 0000 --- --- --- --- 016975 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017016 00000 ------------ C 0.83 0.67 0.76 T 0.17 0.33 0.24 0000 --- --- --- --- 017137 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 017167 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 017237 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017255 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017271 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017281 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017491 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017492 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017521 00000 ------------ G 0.89 0.70 0.79 A 0.11 0.30 0.21 0000 --- --- --- --- 018001 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 018753 00000 ------------ T 0.67 0.71 0.69 G 0.33 0.29 0.31 0000 --- --- --- --- 018793 00000 ------------ C 0.67 0.75 0.71 G 0.33 0.25 0.29 0000 --- --- --- --- 018828 00000 ------------ A 0.67 0.71 0.69 G 0.33 0.29 0.31 0000 --- --- --- --- 018842 00000 ------------ G 0.92 0.68 0.81 T 0.08 0.33 0.19 0000 --- --- --- --- 019054 00000 ------------ A 0.67 0.70 0.68 G 0.33 0.30 0.32 0000 --- --- --- --- 019062 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 019158 00000 ------------ G 0.92 0.68 0.81 A 0.08 0.33 0.19 0000 --- --- --- --- 019223 00000 ------------ A 0.67 0.75 0.70 G 0.33 0.25 0.30 0000 --- --- --- --- 019255 00000 ------------ C 0.90 0.68 0.80 T 0.10 0.33 0.20 0000 --- --- --- --- 019329 00000 ------------ C 0.75 0.75 0.75 G 0.25 0.25 0.25 0000 --- --- --- --- 019403 00000 ------------ A 0.67 0.75 0.70 C 0.33 0.25 0.30 0000 --- --- --- --- 020030 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020053 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020275 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020518 00000 ------------ A 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 020632 00000 ------------ A 0.96 0.95 0.96 T 0.04 0.05 0.04 0000 --- --- --- --- 020785 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 020915 00000 ------------ T 0.90 0.91 0.90 C 0.10 0.09 0.10 0000 --- --- --- --- 020978 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020993 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 021165 00000 ------------ G 0.69 0.59 0.64 A 0.31 0.41 0.36 0000 --- --- --- --- 021457 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021468 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021702 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021816 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 021845 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021884 00000 ------------ T 0.62 0.59 0.61 C 0.38 0.41 0.39 0000 --- --- --- --- 021907 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022012 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 022126 00000 ------------ A 0.60 0.59 0.60 G 0.40 0.41 0.40 0000 --- --- --- --- 022373 00000 ------------ G 0.71 0.59 0.65 A 0.29 0.41 0.35 0000 --- --- --- --- 022547 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 023094 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023567 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023672 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 023960 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024120 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024183 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 024662 00000 ------------ C 0.85 0.70 0.78 T 0.15 0.30 0.22 0000 --- --- --- --- 024979 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025250 00000 ------------ G 0.52 0.55 0.53 A 0.48 0.45 0.47 0000 --- --- --- --- 025289 00000 ------------ A 0.54 0.57 0.55 G 0.46 0.43 0.45 0000 --- --- --- --- 025523 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 025567 00000 ------------ A 0.48 0.55 0.51 G 0.52 0.45 0.49 0000 --- --- --- --- 025815 00000 ------------ C 0.94 0.94 0.94 G 0.06 0.06 0.06 0000 --- --- --- --- 025986 00000 ------------ G 0.94 0.93 0.93 A 0.06 0.07 0.07 0000 --- --- --- --- 026115 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 026267 00000 ------------ T 0.50 0.57 0.53 C 0.50 0.43 0.47 0000 --- --- --- --- 026450 00000 ------------ G 0.95 0.93 0.94 C 0.05 0.07 0.06 0000 --- --- --- --- 026562 00000 ------------ A 0.94 0.93 0.94 G 0.06 0.07 0.06 0000 --- --- --- --- 026568 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 026725 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026734 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 027217 00000 ------------ T 0.54 0.67 0.61 C 0.46 0.33 0.39 0000 --- --- --- --- 027315 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 027431 00000 ------------ G 0.68 0.83 0.76 A 0.32 0.17 0.24 0000 --- --- --- --- 027498 00000 ------------ T 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 027521 00000 ------------ T 0.85 0.78 0.82 C 0.15 0.22 0.18 0000 --- --- --- --- 027556 00000 ------------ G 0.52 0.74 0.63 A 0.48 0.26 0.37 0000 --- --- --- --- 027689 00000 ------------ G 0.91 0.96 0.93 C 0.09 0.04 0.07 0000 --- --- --- --- 028042 01452 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028496 00000 ------------ T 0.80 0.98 0.89 C 0.20 0.02 0.11 0000 --- --- --- --- 028672 00000 ------------ T 0.62 0.61 0.62 G 0.38 0.39 0.38 0000 --- --- --- --- 028873 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 028968 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029183 00000 ------------ T 0.71 0.70 0.70 C 0.29 0.30 0.30 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006729: T 007366: CAGCCT 008263: G 011015: A 013660: GTTCTATTTGTTTT 014376: G 014527: T 016838: AATA 019062: T 022547: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000114 00000 ------------ C 1.00 0.89 0.95 T 0.00 0.11 0.05 0000 --- --- --- --- 000171 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000178 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 000251 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000290 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000345 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000499 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 000537 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000614 00000 ------------ A 0.80 0.54 0.67 G 0.20 0.46 0.33 0000 --- --- --- --- 000664 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 000749 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001284 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001369 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 001393 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001432 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002020 00019 5' UTR G 0.57 0.74 0.65 A 0.43 0.26 0.35 0000 --- --- --- --- 002522 00000 ------------ G 0.93 0.33 0.63 A 0.07 0.67 0.37 0000 --- --- --- --- 002678 00000 ------------ - 0.91 1.00 0.96 + 0.09 0.00 0.04 0000 --- --- --- --- 002745 00000 ------------ G 0.93 0.33 0.63 C 0.07 0.67 0.37 0000 --- --- --- --- 003620 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003826 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005064 00000 ------------ T 0.78 0.97 0.86 C 0.22 0.03 0.14 0000 --- --- --- --- 005236 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005534 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005582 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005989 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006824 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006990 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007214 00000 ------------ G 0.78 1.00 0.89 C 0.22 0.00 0.11 0000 --- --- --- --- 007280 00000 ------------ C 0.90 0.45 0.68 T 0.10 0.55 0.32 0000 --- --- --- --- 007704 00000 ------------ C 0.86 0.98 0.92 T 0.14 0.02 0.08 0000 --- --- --- --- 007743 00000 ------------ T 1.00 0.32 0.66 G 0.00 0.68 0.34 0000 --- --- --- --- 007970 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007996 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008132 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008337 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 010120 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 010268 00000 ------------ C 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 010371 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 010737 00000 ------------ T 0.85 0.50 0.68 C 0.15 0.50 0.32 0000 --- --- --- --- 010826 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 010891 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 011001 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011288 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 011453 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 011454 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011497 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 011732 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011762 00000 ------------ G 0.85 0.68 0.77 A 0.15 0.32 0.23 0000 --- --- --- --- 011769 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012026 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012115 00000 ------------ G 0.83 0.65 0.74 A 0.17 0.35 0.26 0000 --- --- --- --- 012291 00000 ------------ G 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 012593 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012695 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013655 00000 ------------ T 0.98 0.70 0.85 C 0.02 0.30 0.15 0000 --- --- --- --- 013878 00000 ------------ T 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 013932 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 014516 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014522 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 014559 00000 ------------ G 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 014693 00000 ------------ T 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 014743 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 014915 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 014980 00000 ------------ G 0.90 0.50 0.70 A 0.10 0.50 0.30 0000 --- --- --- --- 015016 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 015025 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 015058 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015082 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015267 00337 NON-SYN G 0.85 1.00 0.92 A 0.15 0.00 0.08 0094 GTG ATG VAL(V) MET(M) 015296 00366 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0103 AAC AAT ASN(N) ASN(N) 015525 00595 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015641 00711 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015720 00790 3' UTR C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015778 00848 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015857 00927 3' UTR A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 015891 00961 3' UTR G 0.69 1.00 0.84 T 0.31 0.00 0.16 0000 --- --- --- --- 016866 01936 3' UTR T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017019 02089 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017211 02281 3' UTR G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 017258 02328 3' UTR T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017506 02576 3' UTR C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 017715 02785 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017732 02802 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017744 02814 3' UTR C 0.93 0.39 0.66 A 0.07 0.61 0.34 0000 --- --- --- --- 017901 02971 3' UTR G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 018086 03156 3' UTR C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 018238 03308 3' UTR A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 018431 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 018665 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000664: T 002678: ATGA 018431: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000395 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000452 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002147 00575 NON-SYN T 0.74 1.00 0.88 C 0.26 0.00 0.12 0100 TAC CAC TYR(Y) HIS(H) 002230 00658 NON-SYN G 0.95 1.00 0.97 C 0.05 0.00 0.03 0127 CAG CAC GLN(Q) HIS(H) 002285 00713 NON-SYN C 0.95 1.00 0.97 T 0.05 0.00 0.03 0146 CCA TCA PRO(P) SER(S) 002378 00806 NON-SYN T 0.82 1.00 0.91 A 0.17 0.00 0.09 0177 TCC ACC SER(S) THR(T) 002430 00858 NON-SYN C 1.00 0.97 0.99 T 0.00 0.03 0.01 0194 GCC GTC ALA(A) VAL(V) 002499 00927 NON-SYN G 0.86 1.00 0.93 A 0.14 0.00 0.07 0217 CGA CAA ARG(R) GLN(Q) 002863* 003210 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003477 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003559 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003649 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 003897 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 004167 00000 ------------ - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 004536 00000 ------------ - 0.02 0.02 0.02 + 0.98 0.98 0.98 0000 --- --- --- --- 004699 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004744 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005177 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005213 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005419 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 005435 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 005439 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 005630 00000 ------------ A 0.66 0.98 0.82 G 0.34 0.02 0.18 0000 --- --- --- --- 005789 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 006086 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006655 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 006684 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006745 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007515 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007574 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 007692 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007698 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007813 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 009031 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009318 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009365 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 009579 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009764 00000 ------------ T 0.72 1.00 0.86 C 0.28 0.00 0.14 0000 --- --- --- --- 009781 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 010199 00000 ------------ A 0.71 1.00 0.84 G 0.29 0.00 0.16 0000 --- --- --- --- 010219 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 010220 00000 ------------ T 0.77 1.00 0.88 C 0.23 0.00 0.12 0000 --- --- --- --- 012596 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013092 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013256 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013329 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013417 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 013593 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 013758 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 014253 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 014708 00000 ------------ - 0.71 1.00 0.84 + 0.29 0.00 0.16 0000 --- --- --- --- 014916 00000 ------------ G 0.71 1.00 0.85 C 0.29 0.00 0.15 0000 --- --- --- --- 015140 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015255 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 015291 00000 ------------ G 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 015391 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 015417 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015618 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 015619 00000 ------------ A 0.65 0.98 0.80 G 0.35 0.02 0.20 0000 --- --- --- --- 016062 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 016323 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 016446 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016534 00000 ------------ C 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 016616 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016664 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016818 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017136 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 017392 00000 ------------ T 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 017554 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 018054 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 018399 01390 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0371 AAC AAT ASN(N) ASN(N) 018555 01546 SYNON C 0.85 1.00 0.92 T 0.15 0.00 0.08 0423 CGC CGT ARG(R) ARG(R) 018805 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019245 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 019394 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 019433 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019585 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 019798 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 019810 00000 ------------ C 1.00 0.74 0.88 T 0.00 0.26 0.12 0000 --- --- --- --- 019871 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 020012 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 020018 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 020659 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020761 01768 NON-SYN A 0.98 1.00 0.99 T 0.02 0.00 0.01 0497 AAA AAT LYS(K) ASN(N) 020765 01772 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0499 AAC CAC ASN(N) HIS(H) 020829 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 021607 02182 SYNON G 0.93 1.00 0.97 A 0.07 0.00 0.03 0635 CCG CCA PRO(P) PRO(P) 021944 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022066 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022077 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 022242 00000 ------------ T 0.68 1.00 0.85 C 0.33 0.00 0.15 0000 --- --- --- --- 022749 02539 SYNON G 0.90 1.00 0.95 A 0.10 0.00 0.05 0754 CCG CCA PRO(P) PRO(P) 022973 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 023687 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023811 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 024002 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 024052 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 025036 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 025091 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 025314 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 025346 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 026251 03089 NON-SYN C 0.90 1.00 0.95 A 0.10 0.00 0.05 0938 CGT AGT ARG(R) SER(S) 026423 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 026424 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026440 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 026782 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 026892 00000 ------------ G 0.96 0.91 0.93 C 0.04 0.09 0.07 0000 --- --- --- --- 026894 00000 ------------ C 0.91 0.91 0.91 G 0.09 0.09 0.09 0000 --- --- --- --- 026898 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 027141 03448 SYNON C 1.00 0.97 0.99 T 0.00 0.03 0.01 1057 GCC GCT ALA(A) ALA(A) 027335 03642 3' UTR T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 027383 03690 3' UTR G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 027520 00000 ------------ G 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 028011 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 028330 00000 ------------ G 0.78 1.00 0.89 A 0.22 0.00 0.11 0000 --- --- --- --- 028512 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 028631 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028777 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028927 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004167: G 004536: CA 005419: C 014708: CCTTCCTTTCCTT 020829: T 026423: G The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 002863 A 0.11 0.00 0.05 C 0.00 0.02 0.01 T 0.89 0.98 0.94 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000306 00000 ------------ C 0.92 0.80 0.86 G 0.08 0.20 0.14 0000 --- --- --- --- 000339 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000559 00000 ------------ T 0.60 0.65 0.63 A 0.40 0.35 0.37 0000 --- --- --- --- 001071 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 001706 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 001828 00000 ------------ C 0.92 0.80 0.86 T 0.08 0.20 0.14 0000 --- --- --- --- 001829 00000 ------------ G 0.81 0.63 0.72 A 0.19 0.37 0.28 0000 --- --- --- --- 002132 00000 ------------ G 0.48 0.64 0.56 A 0.52 0.36 0.44 0000 --- --- --- --- 002202 00049 5' UTR C 0.79 0.60 0.70 A 0.21 0.40 0.30 0000 --- --- --- --- 002203 00050 5' UTR G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 002374 00000 ------------ A 0.48 0.66 0.57 G 0.52 0.34 0.43 0000 --- --- --- --- 002490 00000 ------------ G 0.80 0.60 0.70 C 0.20 0.40 0.30 0000 --- --- --- --- 002619 00177 NON-SYN T 0.73 0.71 0.72 C 0.27 0.29 0.28 0013 TGT CGT CYS(C) ARG(R) 002756 00000 ------------ G 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 002820 00292 NON-SYN A 0.96 0.85 0.90 C 0.04 0.15 0.10 0051 CAC CCC HIS(H) PRO(P) 002847 00319 NON-SYN C 0.48 0.64 0.56 A 0.52 0.36 0.44 0060 ACC AAC THR(T) ASN(N) 003842 01067 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 003911 01136 3' UTR T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004022 01247 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004371 00000 ------------ T 0.92 0.74 0.82 C 0.08 0.26 0.18 0000 --- --- --- --- 004539 00000 ------------ C 0.92 0.80 0.86 A 0.08 0.20 0.14 0000 --- --- --- --- 004545 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 004883 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001706: AG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000241 00000 ------------ G 1.00 0.86 0.93 C 0.00 0.14 0.07 0000 --- --- --- --- 000254 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000583 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 000712 00000 ------------ G 0.92 0.86 0.89 C 0.08 0.14 0.11 0000 --- --- --- --- 001239 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001326 00000 ------------ T 0.89 0.97 0.93 C 0.11 0.03 0.07 0000 --- --- --- --- 001977 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002222 00000 ------------ A 0.87 0.91 0.89 C 0.13 0.09 0.11 0000 --- --- --- --- 002371 00217 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0070 GGG GAG GLY(G) GLU(E) 002888 00339 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0111 GCG CCG ALA(A) PRO(P) 003327 00778 3' UTR T 0.96 1.00 0.97 C 0.04 0.00 0.03 0000 --- --- --- --- 003582 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003959 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003986 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 004131 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 004168 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004265 00000 ------------ C 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 004305 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004319 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004131: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000085 00000 ------------ G 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 000171 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 000180 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 000234 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 000444 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 000518 00000 ------------ C 0.83 0.98 0.90 G 0.17 0.02 0.10 0000 --- --- --- --- 001722 00000 ------------ C 0.87 0.98 0.93 T 0.13 0.02 0.07 0000 --- --- --- --- 001946 00000 ------------ G 0.88 0.98 0.93 C 0.12 0.02 0.07 0000 --- --- --- --- 002128 00000 ------------ - 0.94 0.98 0.96 + 0.06 0.02 0.04 0000 --- --- --- --- 002237 00000 ------------ C 0.89 0.98 0.93 G 0.11 0.02 0.07 0000 --- --- --- --- 002315 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 002578 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 002612 00032 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0009 CAG CAA GLN(Q) GLN(Q) 002807 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002942 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 002953 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003220 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003221 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003317 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 003321 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003872 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003919 00000 ------------ T 0.62 0.87 0.74 C 0.38 0.13 0.26 0000 --- --- --- --- 003941 00000 ------------ C 0.75 0.96 0.85 T 0.25 0.04 0.15 0000 --- --- --- --- 004217 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004452 00000 ------------ A 0.93 0.98 0.95 G 0.07 0.02 0.05 0000 --- --- --- --- 004497 00000 ------------ A 0.93 0.98 0.96 G 0.07 0.02 0.04 0000 --- --- --- --- 004528 00000 ------------ T 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 004568 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 004599 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004971 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 005179 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 005323 00000 ------------ C 0.83 0.96 0.89 T 0.17 0.04 0.11 0000 --- --- --- --- 005614 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005649 00235 NON-SYN G 1.00 0.93 0.97 A 0.00 0.07 0.03 0077 CGC CAC ARG(R) HIS(H) 005743 00329 SYNON G 0.94 1.00 0.97 A 0.06 0.00 0.03 0108 GGG GGA GLY(G) GLY(G) 005898 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006280 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 006537 00000 ------------ - 0.12 0.02 0.07 + 0.88 0.98 0.93 0000 --- --- --- --- 006612 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006792 00591 NON-SYN G 1.00 0.96 0.98 A 0.00 0.04 0.02 0196 GTA ATA VAL(V) ILE(I) 006827 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006908 00616 NON-SYN T 1.00 0.96 0.98 A 0.00 0.04 0.02 0204 ATG AAG MET(M) LYS(K) 007008 00716 SYNON C 0.88 0.98 0.92 T 0.12 0.02 0.08 0237 TGC TGT CYS(C) CYS(C) 007011 00719 SYNON C 0.94 0.98 0.96 T 0.06 0.02 0.04 0238 GCC GCT ALA(A) ALA(A) 007134 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007227 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007293 00000 ------------ C 0.83 0.96 0.89 G 0.17 0.04 0.11 0000 --- --- --- --- 007342 00000 ------------ C 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 007358 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 007394 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007481 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007508 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 007563 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007673 00850 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0282 CGC CAC ARG(R) HIS(H) 008240 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008357 00000 ------------ G 0.63 0.93 0.78 T 0.37 0.07 0.22 0000 --- --- --- --- 008389 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 008555 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 008768 00000 ------------ A 0.94 0.96 0.95 C 0.06 0.04 0.05 0000 --- --- --- --- 008848 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008921 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 009501 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 011008 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011314 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 011530 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 011808 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011911 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012045 01146 NON-SYN G 0.85 1.00 0.93 A 0.15 0.00 0.07 0381 GTC ATC VAL(V) ILE(I) 012109 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 012186 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012234 01232 SYNON G 0.96 1.00 0.98 T 0.04 0.00 0.02 0409 CTG CTT LEU(L) LEU(L) 012531 01356 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0451 AAG CAG LYS(K) GLN(Q) 012581 01406 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0467 GAC GAT ASP(D) ASP(D) 012948 01620 NON-SYN A 0.56 0.61 0.59 G 0.44 0.39 0.41 0539 ACC GCC THR(T) ALA(A) 012984 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013017 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013095 01676 SYNON C 1.00 0.95 0.98 T 0.00 0.05 0.02 0557 AGC AGT SER(S) SER(S) 013166 01747 NON-SYN A 1.00 0.95 0.98 T 0.00 0.05 0.02 0581 CAG CTG GLN(Q) LEU(L) 013277 00000 ------------ T 0.79 0.96 0.87 C 0.21 0.04 0.13 0000 --- --- --- --- 013291 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 013304 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 013386 00000 ------------ - 0.73 0.65 0.69 + 0.27 0.35 0.31 0000 --- --- --- --- 013403 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 013447 00000 ------------ A 0.58 0.68 0.63 G 0.42 0.32 0.37 0000 --- --- --- --- 013972 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014005 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 014342 00000 ------------ G 0.91 0.66 0.79 A 0.09 0.34 0.21 0000 --- --- --- --- 014578 02088 3' UTR - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 014724 02234 3' UTR T 0.69 0.41 0.55 C 0.31 0.59 0.45 0000 --- --- --- --- 014781 02291 3' UTR - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 014965 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014975 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015078 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015106 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015167 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 015438 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015518 00000 ------------ G 0.59 0.63 0.61 A 0.41 0.37 0.39 0000 --- --- --- --- 015546 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 015600 00000 ------------ C 0.57 0.61 0.60 T 0.42 0.39 0.40 0000 --- --- --- --- 016426 00000 ------------ T 0.84 0.70 0.77 C 0.16 0.30 0.23 0000 --- --- --- --- 016595 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016734 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016873 00000 ------------ C 0.76 0.65 0.71 T 0.24 0.35 0.29 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002128: GG 002578: CCG 003317: AGGCCGGGGGCTGG 006537: AGG 008921: AGATGG 012186: CCT 013386: CATCCTCATCCCCAACT 014578: AGGG 014781: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000257 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 000275 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000867 00000 ------------ G 0.83 1.00 0.92 A 0.17 0.00 0.08 0000 --- --- --- --- 000959 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 000961 00000 ------------ G 0.78 0.59 0.71 T 0.22 0.41 0.29 0000 --- --- --- --- 000965 00000 ------------ G 0.70 1.00 0.82 T 0.30 0.00 0.17 0000 --- --- --- --- 001392 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001782 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001855 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001897 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001970 00043 5' UTR G 0.81 0.41 0.62 C 0.19 0.59 0.38 0000 --- --- --- --- 001971 00044 5' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001972 00045 5' UTR G 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 002088 00161 5' UTR G 0.50 1.00 0.75 A 0.50 0.00 0.25 0000 --- --- --- --- 002175 00248 5' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002179 00252 5' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002526 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 002655 00000 ------------ A 0.83 0.67 0.76 G 0.17 0.33 0.24 0000 --- --- --- --- 002768 00000 ------------ C 0.50 1.00 0.74 A 0.50 0.00 0.26 0000 --- --- --- --- 002893 00000 ------------ A 0.75 0.41 0.59 G 0.25 0.59 0.41 0000 --- --- --- --- 002963 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 003030 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 003395 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003564 00000 ------------ - 0.58 0.09 0.34 + 0.42 0.91 0.66 0000 --- --- --- --- 003646 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003934 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 004225 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004399 00000 ------------ A 0.97 0.68 0.80 C 0.03 0.32 0.20 0000 --- --- --- --- 004848 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 005007 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 005266 00542 5' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005760 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 005907 00000 ------------ A 0.83 0.67 0.76 G 0.17 0.33 0.24 0000 --- --- --- --- 005974 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 006146 00000 ------------ G 0.75 0.41 0.59 T 0.25 0.59 0.41 0000 --- --- --- --- 006210 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006489 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 006515 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006516 00000 ------------ G 0.42 0.91 0.66 A 0.58 0.09 0.34 0000 --- --- --- --- 006522 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006609 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006702 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 006792 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 006850 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 007163 00930 SYNON T 0.75 0.41 0.59 C 0.25 0.59 0.41 0078 TAT TAC TYR(Y) TYR(Y) 007312 00000 ------------ A 0.73 0.41 0.57 G 0.27 0.59 0.43 0000 --- --- --- --- 007669 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007672 00000 ------------ C 0.91 0.70 0.81 T 0.09 0.30 0.19 0000 --- --- --- --- 008104 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008139 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 008285 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008409 00000 ------------ T 0.94 0.70 0.83 C 0.06 0.30 0.17 0000 --- --- --- --- 008719 00000 ------------ T 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 008765 00000 ------------ C 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 008783 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008802 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008896 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008933 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009169 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009324 00000 ------------ G 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 009573 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 009886 00000 ------------ A 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 009960 00000 ------------ A 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 010014 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010208 00000 ------------ G 0.33 0.76 0.56 A 0.68 0.24 0.44 0000 --- --- --- --- 010233 00000 ------------ T 0.41 0.91 0.66 A 0.59 0.09 0.34 0000 --- --- --- --- 010324 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010343 00000 ------------ T 0.83 1.00 0.92 G 0.17 0.00 0.08 0000 --- --- --- --- 010410 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010473 00000 ------------ A 0.43 0.91 0.68 G 0.57 0.09 0.32 0000 --- --- --- --- 010553 00000 ------------ C 0.81 0.67 0.74 T 0.19 0.33 0.26 0000 --- --- --- --- 010701 00000 ------------ G 0.68 0.91 0.80 A 0.32 0.09 0.20 0000 --- --- --- --- 010722 00000 ------------ G 0.67 0.91 0.80 T 0.33 0.09 0.20 0000 --- --- --- --- 010955 00000 ------------ A 0.94 0.70 0.83 C 0.06 0.30 0.17 0000 --- --- --- --- 011202 00000 ------------ - 0.32 0.00 0.17 + 0.68 1.00 0.83 0000 --- --- --- --- 011727 00000 ------------ - 0.00 0.17 0.09 + 1.00 0.82 0.91 0000 --- --- --- --- 011900 00000 ------------ G 0.93 1.00 0.95 A 0.07 0.00 0.05 0000 --- --- --- --- 012363 00000 ------------ A 1.00 0.80 0.90 C 0.00 0.20 0.10 0000 --- --- --- --- 012468 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012486 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012555 00000 ------------ G 0.74 0.59 0.66 A 0.26 0.41 0.34 0000 --- --- --- --- 012902 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013084 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 013677 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 013799 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013881 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 013945 00000 ------------ G 0.95 0.75 0.84 A 0.05 0.25 0.16 0000 --- --- --- --- 014032 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014033 00000 ------------ G 0.74 0.41 0.56 A 0.26 0.59 0.44 0000 --- --- --- --- 014062 00000 ------------ - 0.08 0.41 0.26 + 0.92 0.59 0.74 0000 --- --- --- --- 014138 00000 ------------ G 0.71 1.00 0.87 A 0.29 0.00 0.13 0000 --- --- --- --- 014265 00000 ------------ G 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 014270 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 014297 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 014463 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014541 00000 ------------ A 0.97 1.00 0.98 G 0.03 0.00 0.02 0000 --- --- --- --- 014672 00000 ------------ T 0.88 0.63 0.76 C 0.12 0.37 0.24 0000 --- --- --- --- 014931 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 014989 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 015735 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016601 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 016903 00000 ------------ G 0.75 1.00 0.87 C 0.25 0.00 0.13 0000 --- --- --- --- 017073 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017105 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017484 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017664 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 018131 00000 ------------ A 0.69 0.36 0.52 G 0.31 0.64 0.48 0000 --- --- --- --- 018796 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 018819 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 018853 00000 ------------ G 0.75 0.39 0.57 A 0.25 0.61 0.43 0000 --- --- --- --- 018928 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019320 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 020182 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 020960 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 021375 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 021462 00000 ------------ T 0.42 0.67 0.54 C 0.58 0.33 0.46 0000 --- --- --- --- 021544 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021663 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 021773 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021875 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022271 00000 ------------ G 0.83 0.34 0.51 A 0.17 0.66 0.49 0000 --- --- --- --- 022377 00000 ------------ G 0.93 0.98 0.95 A 0.07 0.02 0.05 0000 --- --- --- --- 022404 00000 ------------ - 0.24 0.66 0.44 + 0.76 0.34 0.56 0000 --- --- --- --- 022583 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 022747 00000 ------------ G 0.77 0.33 0.54 A 0.23 0.67 0.46 0000 --- --- --- --- 022753 00000 ------------ A 0.98 0.82 0.90 C 0.02 0.18 0.10 0000 --- --- --- --- 023157 00000 ------------ A 0.98 0.82 0.90 T 0.02 0.18 0.10 0000 --- --- --- --- 023370 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024378 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024640 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 024733 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 025035 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 025390 00000 ------------ G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 025898 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 026128 01611 SYNON A 1.00 0.98 0.99 T 0.00 0.02 0.01 0305 TCA TCT SER(S) SER(S) 026278 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026357 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 026620 00000 ------------ C 0.75 0.33 0.53 T 0.25 0.67 0.47 0000 --- --- --- --- 026816 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 027572 00000 ------------ T 0.98 0.86 0.92 C 0.02 0.14 0.08 0000 --- --- --- --- 027666 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027860 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027941 00000 ------------ G 0.52 0.66 0.59 T 0.48 0.34 0.41 0000 --- --- --- --- 027980 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 028665 00000 ------------ G 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 028779 02040 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0448 CTC CTT LEU(L) LEU(L) 028969 02230 3' UTR A 1.00 0.83 0.90 G 0.00 0.17 0.10 0000 --- --- --- --- 029271 02532 3' UTR - 0.06 0.00 0.02 + 0.94 1.00 0.98 0000 --- --- --- --- 029718 02979 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 029731 02992 3' UTR G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 029793 03054 3' UTR T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 029798 03059 3' UTR T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 029979 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 030024 00000 ------------ T 0.27 0.68 0.53 C 0.73 0.32 0.47 0000 --- --- --- --- 030062 00000 ------------ - 0.96 1.00 0.99 + 0.04 0.00 0.01 0000 --- --- --- --- 030113 00000 ------------ A 0.79 1.00 0.92 G 0.21 0.00 0.08 0000 --- --- --- --- 030188 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 030197 00000 ------------ C 0.96 1.00 0.99 T 0.04 0.00 0.01 0000 --- --- --- --- 030240 00000 ------------ T 1.00 0.93 0.96 G 0.00 0.07 0.04 0000 --- --- --- --- 030246 00000 ------------ T 0.93 0.86 0.89 C 0.07 0.14 0.11 0000 --- --- --- --- 030276 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030470 00000 ------------ A 0.96 1.00 0.99 G 0.04 0.00 0.01 0000 --- --- --- --- 030935 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031092 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 031173 00000 ------------ A 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003030: G 003564: A 011202: G 011727: A 014062: C 014270: T 016601: T 018819: CACGCCT 020182: A 021663: CCTTAGTGGTACTCCAGCGATCCTCACTCTTTGGTGGGAGGACTTACTTTAAATTACCTGAATTATTAAAAGAGCAACCGTTTAG 022404: CAAA 029271: TT 030062: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000100 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000318 00000 ------------ C 0.80 0.43 0.61 T 0.20 0.57 0.39 0000 --- --- --- --- 000404 00000 ------------ G 0.58 0.92 0.74 A 0.42 0.08 0.26 0000 --- --- --- --- 000818 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000965 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001581 00000 ------------ C 0.44 0.59 0.51 T 0.56 0.41 0.49 0000 --- --- --- --- 001598 00000 ------------ A 0.81 0.39 0.61 G 0.19 0.61 0.39 0000 --- --- --- --- 001674 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002132 00000 ------------ - 0.40 0.33 0.36 + 0.60 0.67 0.64 0000 --- --- --- --- 002146 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002187 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002414 00000 ------------ C 0.79 0.41 0.59 T 0.21 0.59 0.41 0000 --- --- --- --- 002422 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 002541 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002648 00000 ------------ C 0.87 0.45 0.67 T 0.13 0.55 0.33 0000 --- --- --- --- 002783 00000 ------------ G 0.80 0.41 0.61 A 0.20 0.59 0.39 0000 --- --- --- --- 003175 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003221 00000 ------------ C 0.46 0.65 0.55 T 0.54 0.35 0.45 0000 --- --- --- --- 003261 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003266 00000 ------------ G 0.63 0.76 0.70 A 0.37 0.24 0.30 0000 --- --- --- --- 003388 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003485 00000 ------------ A 0.48 0.76 0.62 T 0.52 0.24 0.38 0000 --- --- --- --- 003888 00346 NON-SYN G 1.00 0.89 0.94 T 0.00 0.11 0.06 0060 GTG TTG VAL(V) LEU(L) 003984 00442 NON-SYN G 1.00 0.93 0.97 A 0.00 0.07 0.03 0092 GTG ATG VAL(V) MET(M) 004028 00486 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0106 CTG CTA LEU(L) LEU(L) 004161 00619 NON-SYN C 1.00 0.89 0.95 T 0.00 0.11 0.05 0151 CGC TGC ARG(R) CYS(C) 004174 00632 NON-SYN T 1.00 0.98 0.99 C 0.00 0.02 0.01 0155 ATC ACC ILE(I) THR(T) 004176 00634 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0156 GTG CTG VAL(V) LEU(L) 004188 00646 NON-SYN C 1.00 0.91 0.96 T 0.00 0.09 0.04 0160 CGG TGG ARG(R) TRP(W) 004198 00656 NON-SYN G 0.98 0.98 0.98 A 0.02 0.02 0.02 0163 CGA CAA ARG(R) GLN(Q) 004296 00754 NON-SYN T 0.93 1.00 0.97 C 0.07 0.00 0.03 0196 TTC CTC PHE(F) LEU(L) 004610 01068 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0300 TTC TTT PHE(F) PHE(F) 004652 01110 SYNON A 0.58 0.91 0.74 G 0.42 0.09 0.26 0314 ACA ACG THR(T) THR(T) 004676 01134 3' UTR G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 004804 01262 3' UTR A 0.71 0.85 0.78 G 0.29 0.15 0.22 0000 --- --- --- --- 004821 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 005245 00000 ------------ A 0.72 0.91 0.82 G 0.28 0.09 0.18 0000 --- --- --- --- 005773 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006027 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 006133 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 006590 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 006620 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006690 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002132: AT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000372 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000463 00000 ------------ A 0.57 0.57 0.57 G 0.43 0.43 0.43 0000 --- --- --- --- 000544 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 000668 00000 ------------ C 0.96 0.87 0.91 G 0.04 0.13 0.09 0000 --- --- --- --- 001303 00000 ------------ A 0.75 0.57 0.66 G 0.25 0.43 0.34 0000 --- --- --- --- 001362 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001589 00000 ------------ A 0.45 0.58 0.51 G 0.55 0.42 0.49 0000 --- --- --- --- 001685 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001758 00000 ------------ C 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 002637 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002672 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 002959 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003014 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 003048 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003550 00000 ------------ T 1.00 0.73 0.86 C 0.00 0.27 0.14 0000 --- --- --- --- 003628 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003687 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003779 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003905 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003996 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004021 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004257 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004606 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004965 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005032 00000 ------------ C 0.57 0.59 0.58 G 0.43 0.41 0.42 0000 --- --- --- --- 005634 00000 ------------ A 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 005724 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005737 00000 ------------ G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 005872 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006181 00000 ------------ T 0.89 0.89 0.89 G 0.11 0.11 0.11 0000 --- --- --- --- 006254 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006300 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006391 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 006393 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006420 00000 ------------ T 0.94 0.93 0.94 G 0.06 0.07 0.06 0000 --- --- --- --- 006426 00000 ------------ G 0.54 0.57 0.55 A 0.46 0.43 0.45 0000 --- --- --- --- 006564 00000 ------------ T 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 006600 00000 ------------ A 0.85 0.83 0.84 G 0.15 0.17 0.16 0000 --- --- --- --- 006993 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 007644 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007669 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007756 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 007828 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007865 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007907 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007925 00000 ------------ T 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 008002 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008084 00000 ------------ G 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 008203 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 008310 00000 ------------ A 0.83 0.61 0.72 G 0.17 0.39 0.28 0000 --- --- --- --- 008393 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 008455 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008693 00000 ------------ - 0.16 0.00 0.09 + 0.84 1.00 0.91 0000 --- --- --- --- 008849 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 009014 00000 ------------ G 0.56 0.57 0.57 T 0.44 0.43 0.43 0000 --- --- --- --- 009620 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009643 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 009717 00000 ------------ - 0.46 0.43 0.45 + 0.54 0.57 0.55 0000 --- --- --- --- 009731 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009751 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 009975 00000 ------------ G 0.54 0.57 0.55 T 0.46 0.43 0.45 0000 --- --- --- --- 010046 00000 ------------ C 0.56 0.57 0.56 T 0.44 0.43 0.44 0000 --- --- --- --- 010475 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 010885 00000 ------------ C 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 010951 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 011247 00000 ------------ A 0.98 0.83 0.90 G 0.02 0.17 0.10 0000 --- --- --- --- 012104 00000 ------------ G 0.55 0.55 0.55 A 0.45 0.45 0.45 0000 --- --- --- --- 012455 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 012501 00000 ------------ G 0.90 0.87 0.88 A 0.10 0.13 0.12 0000 --- --- --- --- 012592 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012752 00000 ------------ G 0.81 1.00 0.89 A 0.19 0.00 0.11 0000 --- --- --- --- 012861 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012889 00000 ------------ C 1.00 0.82 0.92 G 0.00 0.18 0.08 0000 --- --- --- --- 013281 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 013284 00000 ------------ C 1.00 0.67 0.84 T 0.00 0.33 0.16 0000 --- --- --- --- 013978 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014010 00000 ------------ G 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 014292 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014626 00000 ------------ T 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 014634 00000 ------------ C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 014777 00000 ------------ - 0.00 0.25 0.12 + 1.00 0.75 0.88 0000 --- --- --- --- 014954 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015107 00000 ------------ A 0.59 0.57 0.58 C 0.41 0.43 0.42 0000 --- --- --- --- 016004 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016406 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 016424 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016444 00000 ------------ G 0.77 0.57 0.67 T 0.23 0.43 0.33 0000 --- --- --- --- 016465 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016878 00952 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0266 GAC AAC ASP(D) ASN(N) 017080 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 017087 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 017183 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017251 00000 ------------ T 1.00 0.78 0.89 A 0.00 0.22 0.11 0000 --- --- --- --- 017314 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017323 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017526 01062 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0302 TCG TCA SER(S) SER(S) 017589 00000 ------------ T 0.83 0.83 0.83 G 0.17 0.17 0.17 0000 --- --- --- --- 017937 00000 ------------ G 0.54 0.57 0.55 A 0.46 0.43 0.45 0000 --- --- --- --- 018116 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 018139 00000 ------------ T 0.56 0.52 0.54 C 0.44 0.48 0.46 0000 --- --- --- --- 018325 00000 ------------ G 0.54 0.55 0.55 A 0.46 0.45 0.45 0000 --- --- --- --- 018696 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 018924 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 019556 00000 ------------ T 0.81 0.83 0.82 C 0.19 0.17 0.18 0000 --- --- --- --- 019562 00000 ------------ G 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- 020088 01127 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0324 CCA CTA PRO(P) LEU(L) 027144 00000 ------------ C 0.91 0.96 0.93 T 0.09 0.04 0.07 0000 --- --- --- --- 027328 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 027384 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 027511 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027609 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027852 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027911 00000 ------------ A 0.53 0.57 0.55 G 0.47 0.43 0.45 0000 --- --- --- --- 028122 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 029566 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029597 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 029642 00000 ------------ C 0.55 0.57 0.56 T 0.45 0.43 0.44 0000 --- --- --- --- 029887 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 030647 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 030783 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 030826 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030875 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031008 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 031422 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031680 00000 ------------ - 0.11 0.36 0.23 + 0.89 0.64 0.77 0000 --- --- --- --- 032125 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032126 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 032221 00000 ------------ A 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 032282 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 032691 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 032957 00000 ------------ G 0.75 0.57 0.66 A 0.25 0.43 0.34 0000 --- --- --- --- 033193 00000 ------------ G 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 033645 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033891 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 033953 00000 ------------ T 0.83 0.61 0.72 C 0.17 0.39 0.28 0000 --- --- --- --- 034035 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 034492 00000 ------------ G 0.89 0.90 0.90 C 0.11 0.10 0.10 0000 --- --- --- --- 034563 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034844 01214 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0353 GCC GTC ALA(A) VAL(V) 034997 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035468 00000 ------------ T 1.00 0.83 0.91 C 0.00 0.17 0.09 0000 --- --- --- --- 036023 00000 ------------ G 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 036057 00000 ------------ A 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 036063 00000 ------------ G 0.70 0.50 0.62 A 0.30 0.50 0.38 0000 --- --- --- --- 036502 00000 ------------ G 0.83 0.79 0.82 T 0.17 0.21 0.18 0000 --- --- --- --- 036871 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037106 00000 ------------ C 0.83 0.83 0.83 T 0.17 0.17 0.17 0000 --- --- --- --- 037316 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037344 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 037456 00000 ------------ A 0.73 0.57 0.65 G 0.27 0.43 0.35 0000 --- --- --- --- 037896 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038130 00000 ------------ G 1.00 0.78 0.89 A 0.00 0.22 0.11 0000 --- --- --- --- 038668 00000 ------------ G 0.67 0.57 0.62 A 0.33 0.43 0.38 0000 --- --- --- --- 039497 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039986 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 040399 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040400 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041263 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 041825 00000 ------------ G 0.83 0.57 0.74 A 0.17 0.43 0.26 0000 --- --- --- --- 041991 00000 ------------ C 0.92 1.00 0.95 T 0.08 0.00 0.05 0000 --- --- --- --- 042250 00000 ------------ C 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 042791 00000 ------------ G 1.00 0.78 0.89 A 0.00 0.22 0.11 0000 --- --- --- --- 042887 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042951 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 043723 01838 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 044117 02232 3' UTR T 0.54 0.57 0.55 C 0.46 0.43 0.45 0000 --- --- --- --- 044138 02253 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 044655 02770 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 045095 03210 3' UTR T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 046343 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 046403 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 046532 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 046566 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 046777 00000 ------------ C 0.88 0.96 0.91 G 0.12 0.04 0.09 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007756: C 008693: CTCT 009717: A 014777: A 027384: G 028122: A 031008: T 031680: TT 046343: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000364 00000 ------------ C 0.88 1.00 0.91 T 0.12 0.00 0.09 0000 --- --- --- --- 000670 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 000835 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001509 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001710 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 002326 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002908 00000 ------------ T 1.00 0.72 0.86 C 0.00 0.28 0.14 0000 --- --- --- --- 003039 00041 5' UTR G 0.65 0.70 0.67 A 0.35 0.30 0.33 0000 --- --- --- --- 004521 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 004760 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006006 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006264 00000 ------------ A 0.38 0.65 0.51 G 0.62 0.35 0.49 0000 --- --- --- --- 006273 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006318 00000 ------------ C 0.83 0.35 0.60 T 0.17 0.65 0.40 0000 --- --- --- --- 006746 00407 NON-SYN A 0.38 0.67 0.52 G 0.62 0.33 0.48 0102 ACC GCC THR(T) ALA(A) 007097 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007306 00000 ------------ A 0.52 0.67 0.60 T 0.48 0.33 0.40 0000 --- --- --- --- 007369 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 007479 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 007703 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008236 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 008883 00000 ------------ T 0.48 0.68 0.58 A 0.52 0.32 0.42 0000 --- --- --- --- 008885 00000 ------------ G 0.48 0.68 0.58 A 0.52 0.32 0.42 0000 --- --- --- --- 008967 00000 ------------ - 0.48 0.68 0.57 + 0.52 0.32 0.43 0000 --- --- --- --- 008969 00000 ------------ A 0.48 0.68 0.57 T 0.52 0.32 0.43 0000 --- --- --- --- 009211 00000 ------------ T 0.66 0.72 0.69 C 0.34 0.28 0.31 0000 --- --- --- --- 009763 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009809 00000 ------------ G 0.54 0.68 0.61 A 0.46 0.32 0.39 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007479: GTTAT 008967: TC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000607 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 000621 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000818 00000 ------------ T 0.41 0.66 0.53 C 0.59 0.34 0.47 0000 --- --- --- --- 000871 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001187 00000 ------------ - 0.20 0.67 0.43 + 0.80 0.33 0.57 0000 --- --- --- --- 001314 00000 ------------ G 1.00 0.88 0.94 T 0.00 0.12 0.06 0000 --- --- --- --- 001445 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001459 00000 ------------ A 0.41 0.66 0.53 C 0.59 0.34 0.47 0000 --- --- --- --- 002092 00000 ------------ A 0.78 0.89 0.84 G 0.22 0.11 0.16 0000 --- --- --- --- 002257 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002424 00000 ------------ G 0.38 0.67 0.52 C 0.62 0.33 0.48 0000 --- --- --- --- 002467 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002512 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 003364 00000 ------------ C 0.41 0.67 0.54 G 0.59 0.33 0.46 0000 --- --- --- --- 003466 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 003521 00196 NON-SYN A 0.40 0.67 0.55 G 0.60 0.33 0.45 0045 AAA GAA LYS(K) GLU(E) 003676 00351 SYNON T 0.53 0.71 0.62 C 0.47 0.29 0.38 0096 GAT GAC ASP(D) ASP(D) 004095 00000 ------------ G 0.85 0.87 0.86 A 0.15 0.13 0.14 0000 --- --- --- --- 005560 00000 ------------ G 0.98 0.89 0.93 C 0.02 0.11 0.07 0000 --- --- --- --- 005701 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005803 00000 ------------ A 0.36 0.67 0.52 G 0.64 0.33 0.48 0000 --- --- --- --- 006127 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006159 00855 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0264 GGA GGG GLY(G) GLY(G) 006364 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006434 00000 ------------ A 0.97 0.93 0.95 T 0.03 0.07 0.05 0000 --- --- --- --- 006658 00000 ------------ A 0.92 0.93 0.92 G 0.08 0.07 0.08 0000 --- --- --- --- 006670 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 006673 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006884 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 006976 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 006981 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007058 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007400 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 007548 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007619 00000 ------------ A 0.98 0.90 0.94 T 0.02 0.10 0.06 0000 --- --- --- --- 007678 00000 ------------ - 0.13 0.00 0.07 + 0.87 1.00 0.93 0000 --- --- --- --- 007716 01149 SYNON T 0.47 0.67 0.57 C 0.53 0.33 0.42 0362 GCT GCC ALA(A) ALA(A) 008354 00000 ------------ C 0.65 0.80 0.72 T 0.35 0.20 0.28 0000 --- --- --- --- 008482 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008634 00000 ------------ G 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 008638 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008669 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008730 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008803 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009227 00000 ------------ T 0.50 0.66 0.58 C 0.50 0.34 0.42 0000 --- --- --- --- 009775 00000 ------------ T 1.00 0.90 0.96 A 0.00 0.10 0.04 0000 --- --- --- --- 009802 00000 ------------ G 0.52 0.72 0.61 T 0.48 0.28 0.39 0000 --- --- --- --- 009836 00000 ------------ C 1.00 0.90 0.95 T 0.00 0.10 0.05 0000 --- --- --- --- 010084 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 010398 01611 3' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 010418 01631 3' UTR C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 010437 01650 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 010912 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011177 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011393 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 011482 00000 ------------ G 0.58 0.79 0.67 C 0.42 0.21 0.33 0000 --- --- --- --- 011531 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011533 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011825 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 011826 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011860 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 012091 00000 ------------ - 0.00 0.10 0.05 + 1.00 0.90 0.95 0000 --- --- --- --- 012243 00000 ------------ T 0.45 0.70 0.56 C 0.55 0.30 0.44 0000 --- --- --- --- 012664 00000 ------------ C 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001187: T 007678: CT 008638: CAATTGTGGTAGGGAATTAAAATTGCATTTT 011825: G 012091: CT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000061 00000 ------------ C 0.50 0.61 0.55 T 0.50 0.39 0.45 0000 --- --- --- --- 000099 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 000180 00000 ------------ T 0.81 0.87 0.84 A 0.19 0.13 0.16 0000 --- --- --- --- 000421 00000 ------------ C 0.81 0.87 0.84 T 0.19 0.13 0.16 0000 --- --- --- --- 000809 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000940 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001127 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001268 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001355 00000 ------------ T 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 001817 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 001863 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002069 00078 NON-SYN C 0.95 1.00 0.98 T 0.05 0.00 0.02 0020 GCC GTC ALA(A) VAL(V) 002581 00000 ------------ T 0.42 0.63 0.52 C 0.58 0.37 0.48 0000 --- --- --- --- 002797 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003226 00000 ------------ G 0.58 0.41 0.50 A 0.42 0.59 0.50 0000 --- --- --- --- 003576 00400 NON-SYN C 0.94 1.00 0.97 G 0.06 0.00 0.03 0127 AAC AAG ASN(N) LYS(K) 003956 00000 ------------ C 0.83 0.46 0.65 T 0.17 0.54 0.35 0000 --- --- --- --- 004137 00000 ------------ G 0.77 0.87 0.82 T 0.23 0.13 0.18 0000 --- --- --- --- 004670 00855 NON-SYN A 0.59 0.57 0.58 G 0.41 0.42 0.42 0279 CAG CGG GLN(Q) ARG(R) 004836 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005010 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005020 00000 ------------ A 0.81 0.86 0.84 G 0.19 0.14 0.16 0000 --- --- --- --- 005404 00000 ------------ G 0.83 0.46 0.65 A 0.17 0.54 0.35 0000 --- --- --- --- 005899 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 006176 00000 ------------ G 0.90 0.76 0.83 A 0.10 0.24 0.17 0000 --- --- --- --- 006191 00000 ------------ + 0.88 1.00 0.94 - 0.12 0.00 0.06 0000 --- --- --- --- 006328 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006649 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006851 01740 NON-SYN C 0.87 0.91 0.89 G 0.13 0.09 0.11 0574 CCG CGG PRO(P) ARG(R) 006955 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 006977 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 007556 02022 NON-SYN G 0.77 0.86 0.82 A 0.23 0.14 0.18 0668 CGA CAA ARG(R) GLN(Q) 008037 00000 ------------ A 0.73 0.87 0.80 G 0.27 0.13 0.20 0000 --- --- --- --- 008215 00000 ------------ A 0.90 0.76 0.83 G 0.10 0.24 0.17 0000 --- --- --- --- 008252 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008375 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008620 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 008825 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 008842 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009154 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009410 02101 SYNON G 0.79 0.87 0.83 A 0.21 0.13 0.17 0694 GTG GTA VAL(V) VAL(V) 009455 02146 3' UTR C 0.83 0.46 0.65 T 0.17 0.54 0.35 0000 --- --- --- --- 009598 02289 3' UTR T 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 009733 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009734 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009784 00000 ------------ G 0.77 0.87 0.82 A 0.23 0.13 0.18 0000 --- --- --- --- 010006 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010038 00000 ------------ G 0.77 0.87 0.82 A 0.23 0.13 0.18 0000 --- --- --- --- 010136 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010137 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010215 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010805 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 010822 00000 ------------ T 0.75 1.00 0.88 C 0.25 0.00 0.12 0000 --- --- --- --- 011042 00000 ------------ + 0.93 1.00 0.97 - 0.07 0.00 0.03 0000 --- --- --- --- 011055 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001817: AG 006191: GAA 011042: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000156 00000 ------------ C 0.88 0.83 0.85 A 0.12 0.17 0.15 0000 --- --- --- --- 000316 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000350 00000 ------------ - 0.00 0.09 0.04 + 1.00 0.91 0.96 0000 --- --- --- --- 000520 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 000533 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000550 00000 ------------ T 0.88 0.83 0.85 C 0.12 0.17 0.15 0000 --- --- --- --- 000558 00000 ------------ C 0.85 0.83 0.84 T 0.15 0.17 0.16 0000 --- --- --- --- 000906 00000 ------------ A 0.88 0.83 0.86 G 0.12 0.17 0.14 0000 --- --- --- --- 001029 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001073 00000 ------------ A 0.86 0.81 0.84 G 0.14 0.19 0.16 0000 --- --- --- --- 001128 00000 ------------ C 0.86 0.81 0.83 T 0.14 0.19 0.17 0000 --- --- --- --- 001360 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 001368 00000 ------------ - 0.83 0.72 0.78 + 0.17 0.28 0.22 0000 --- --- --- --- 001412 00000 ------------ A 0.87 0.87 0.87 T 0.13 0.13 0.13 0000 --- --- --- --- 001497 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001665 00000 ------------ C 0.93 0.76 0.85 T 0.07 0.24 0.15 0000 --- --- --- --- 002002 00012 5' UTR - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 002014 00024 5' UTR C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002015 00025 5' UTR G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002017 00027 5' UTR - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 002181 00191 SYNON C 0.78 0.70 0.73 T 0.23 0.30 0.27 0027 GAC GAT ASP(D) ASP(D) 002351 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002384 00000 ------------ T 0.93 0.76 0.85 A 0.07 0.24 0.15 0000 --- --- --- --- 002453 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 002583 00000 ------------ - 0.89 0.74 0.82 + 0.11 0.26 0.18 0000 --- --- --- --- 002606 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 002963 00353 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0081 GCC GCT ALA(A) ALA(A) 003026 00416 SYNON C 0.96 0.74 0.85 T 0.04 0.26 0.15 0102 GCC GCT ALA(A) ALA(A) 003115 00000 ------------ - 0.04 0.11 0.07 + 0.96 0.89 0.93 0000 --- --- --- --- 003154 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003157 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003160 00000 ------------ C 0.40 0.72 0.55 T 0.60 0.28 0.45 0000 --- --- --- --- 003168 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003187 00000 ------------ C 0.73 0.91 0.82 T 0.27 0.09 0.18 0000 --- --- --- --- 003645 00000 ------------ G 0.94 0.82 0.88 A 0.06 0.18 0.12 0000 --- --- --- --- 003858 00000 ------------ G 0.98 0.80 0.89 A 0.02 0.20 0.11 0000 --- --- --- --- 003992 00000 ------------ C 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 004509 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004511 00000 ------------ - 0.31 0.23 0.27 + 0.69 0.77 0.73 0000 --- --- --- --- 004512 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004564 00000 ------------ C 0.75 0.83 0.79 T 0.25 0.17 0.21 0000 --- --- --- --- 004669 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004754 01066 3' UTR C 0.39 0.62 0.50 T 0.61 0.38 0.50 0000 --- --- --- --- 004770 01082 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004827 01139 3' UTR - 0.02 0.05 0.03 + 0.98 0.95 0.97 0000 --- --- --- --- 004878 01190 3' UTR G 0.39 0.68 0.52 A 0.61 0.33 0.48 0000 --- --- --- --- 004896 01208 3' UTR - 0.98 0.96 0.97 + 0.02 0.04 0.03 0000 --- --- --- --- 005017 01329 3' UTR G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 005519 00000 ------------ A 0.70 0.78 0.74 G 0.30 0.22 0.26 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000350: CT 001360: GGTGGGGG 001368: GGAGGGGG 002002: TGCCGTCC 002017: CCGCCCGC 002453: G 002583: A 003115: AG 004511: CCTTTTTTTAATAGCTTAC 004827: AAA 004896: TT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000241 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000305 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000617 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000643 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 000674 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001152 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001198 00000 ------------ A 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 002243 00000 ------------ C 0.83 0.63 0.73 G 0.17 0.37 0.27 0000 --- --- --- --- 002859 00000 ------------ G 0.56 0.57 0.56 A 0.44 0.43 0.44 0000 --- --- --- --- 002960 00000 ------------ - 0.56 0.57 0.56 + 0.44 0.43 0.44 0000 --- --- --- --- 003022 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 003023 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 003130 00000 ------------ C 0.59 0.57 0.58 T 0.41 0.43 0.42 0000 --- --- --- --- 003180 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 003798 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 003847 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004034 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 004267 00000 ------------ C 0.80 0.63 0.72 A 0.20 0.37 0.28 0000 --- --- --- --- 004318 00000 ------------ C 0.61 0.46 0.53 T 0.39 0.54 0.47 0000 --- --- --- --- 004438 00000 ------------ - 0.56 0.55 0.56 + 0.44 0.45 0.44 0000 --- --- --- --- 004811 00000 ------------ G 0.56 0.57 0.56 A 0.44 0.43 0.44 0000 --- --- --- --- 005584 00000 ------------ G 0.63 0.57 0.60 C 0.37 0.43 0.40 0000 --- --- --- --- 005794 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 005953 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 006228 00000 ------------ C 0.85 0.80 0.83 T 0.15 0.20 0.17 0000 --- --- --- --- 006302 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006369 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006385 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006410 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 006434 00000 ------------ - 0.44 0.43 0.44 + 0.56 0.57 0.56 0000 --- --- --- --- 006543 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006613 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006648 00000 ------------ T 0.63 0.80 0.72 C 0.37 0.20 0.28 0000 --- --- --- --- 006709 00000 ------------ - 0.70 0.57 0.63 + 0.30 0.43 0.37 0000 --- --- --- --- 007617 00000 ------------ C 0.59 0.45 0.52 G 0.41 0.55 0.48 0000 --- --- --- --- 007627 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007652 00000 ------------ A 0.91 0.95 0.93 T 0.09 0.05 0.07 0000 --- --- --- --- 007856 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007874 00000 ------------ A 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 007966 00000 ------------ C 0.83 0.82 0.82 T 0.17 0.18 0.18 0000 --- --- --- --- 008950 00000 ------------ A 1.00 0.57 0.80 G 0.00 0.43 0.20 0000 --- --- --- --- 009014 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 009733 00000 ------------ A 0.57 0.50 0.53 G 0.43 0.50 0.47 0000 --- --- --- --- 009948 00000 ------------ A 0.78 0.72 0.76 G 0.22 0.28 0.24 0000 --- --- --- --- 009966 00000 ------------ T 0.78 0.72 0.76 C 0.22 0.28 0.24 0000 --- --- --- --- 010226 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 010464 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010512 00000 ------------ A 0.79 0.65 0.72 G 0.21 0.35 0.28 0000 --- --- --- --- 010594 00000 ------------ C 0.83 0.87 0.85 T 0.17 0.13 0.15 0000 --- --- --- --- 010733 01049 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0339 CGG TGG ARG(R) TRP(W) 011082 00000 ------------ C 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 011372 00000 ------------ - 0.60 0.57 0.59 + 0.40 0.43 0.41 0000 --- --- --- --- 011493 00000 ------------ G 0.54 0.57 0.55 C 0.46 0.43 0.45 0000 --- --- --- --- 011505 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011812 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011813 00000 ------------ T 0.59 0.57 0.58 C 0.41 0.43 0.42 0000 --- --- --- --- 011822 00000 ------------ G 0.87 0.57 0.72 A 0.13 0.43 0.28 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002960: T 003022: T 003180: TTTCATTAAA 003847: AATT 004438: GCTTTTGTATGGTTGTGAGCTAAGAATGGTCTTTACATTTTTAAACAGTTTCTAAAAATCAAAAGAATAATAATATTATATG 006434: CTTT 006709: GTTT 011372: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000136 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000358 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000552 00000 ------------ G 0.93 0.96 0.95 A 0.07 0.04 0.05 0000 --- --- --- --- 000653 00000 ------------ C 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 000735 00000 ------------ C 0.93 0.96 0.95 G 0.07 0.04 0.05 0000 --- --- --- --- 001750 00002 5' UTR A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 001943 00195 FRAME SHIFT - 0.97 1.00 0.99 + 0.03 0.00 0.01 0057 G-C GGC --- --- 002013 00265 SYNON C 1.00 0.97 0.99 T 0.00 0.03 0.01 0080 AGC AGT SER(S) SER(S) 002059 00311 NON-SYN C 0.98 0.93 0.95 G 0.02 0.07 0.05 0096 CAG GAG GLN(Q) GLU(E) 003201 00000 ------------ T 0.92 0.55 0.74 C 0.08 0.45 0.26 0000 --- --- --- --- 003591 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003782 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003796 00000 ------------ C 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 004103 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004121 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004160 00000 ------------ A 0.98 0.88 0.93 G 0.02 0.12 0.07 0000 --- --- --- --- 004539 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004567 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 005035 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 005568 00000 ------------ T 0.25 0.83 0.53 C 0.75 0.17 0.47 0000 --- --- --- --- 005571 00000 ------------ G 0.25 0.83 0.53 A 0.75 0.17 0.47 0000 --- --- --- --- 005572 00000 ------------ G 0.25 0.83 0.53 A 0.75 0.17 0.47 0000 --- --- --- --- 005578 00000 ------------ - 0.25 0.83 0.53 + 0.75 0.17 0.47 0000 --- --- --- --- 006090 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006461 00000 ------------ T 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 006481 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006824 00000 ------------ T 0.96 0.54 0.75 C 0.04 0.46 0.25 0000 --- --- --- --- 007114 00000 ------------ C 0.95 0.52 0.72 T 0.05 0.48 0.28 0000 --- --- --- --- 007525 00000 ------------ G 1.00 0.81 0.91 T 0.00 0.19 0.09 0000 --- --- --- --- 007946 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008052 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 008473 01682 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008522 01731 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008843 02052 3' UTR G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 009081 00000 ------------ A 0.93 0.84 0.89 G 0.07 0.16 0.11 0000 --- --- --- --- 009251 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009259 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009416 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001943: G 005578: T 009416: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000450 00000 ------------ T 0.60 0.43 0.52 A 0.40 0.57 0.48 0000 --- --- --- --- 000479 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000543 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 000789 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000823 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000835 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000943 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000985 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000996 00000 ------------ A 0.85 0.43 0.64 G 0.15 0.57 0.36 0000 --- --- --- --- 001023 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001062 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001132 00000 ------------ T 0.86 0.41 0.63 C 0.14 0.59 0.37 0000 --- --- --- --- 001229 00000 ------------ C 1.00 0.80 0.90 T 0.00 0.20 0.10 0000 --- --- --- --- 001339 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 001345 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002226 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002493 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003497 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 004609 -----** NON-SYN G 0.92 1.00 0.96 A 0.08 0.00 0.04 0112 CGG CAG ARG(R) GLN(Q) 004887 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005383 00000 ------------ A 0.76 0.84 0.80 G 0.24 0.16 0.20 0000 --- --- --- --- 005410 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005659 00000 ------------ A 0.56 0.80 0.68 G 0.44 0.20 0.32 0000 --- --- --- --- 006237 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006248 00000 ------------ G 0.93 0.80 0.87 A 0.07 0.20 0.13 0000 --- --- --- --- 006267 00000 ------------ A 0.57 0.80 0.68 G 0.43 0.20 0.32 0000 --- --- --- --- 006779 -----** SYNON C 0.85 0.54 0.70 T 0.15 0.46 0.30 0258 GAC GAT ASP(D) ASP(D) 007164 -----** NON-SYN G 0.86 0.50 0.68 T 0.14 0.50 0.32 0298 GAG GAT GLU(E) ASP(D) 008148 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 008149 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008275 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008347 00000 ------------ A 0.90 0.80 0.85 G 0.10 0.20 0.15 0000 --- --- --- --- 008386 00000 ------------ A 0.88 0.52 0.70 C 0.12 0.48 0.30 0000 --- --- --- --- 008785 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008860 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009932 00000 ------------ G 0.67 0.34 0.50 A 0.33 0.66 0.50 0000 --- --- --- --- 010213 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 010303 00000 ------------ G 0.85 0.91 0.88 T 0.15 0.09 0.12 0000 --- --- --- --- 010930 00000 ------------ A 1.00 0.41 0.65 G 0.00 0.59 0.35 0000 --- --- --- --- 010987 00000 ------------ C 0.54 0.83 0.68 T 0.46 0.17 0.32 0000 --- --- --- --- 011034 00000 ------------ C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 011999 00000 ------------ C 1.00 0.83 0.91 A 0.00 0.17 0.09 0000 --- --- --- --- 012332 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 012351 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012808 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 012836 00000 ------------ G 0.54 0.83 0.68 A 0.46 0.17 0.32 0000 --- --- --- --- 012911 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 013124 00000 ------------ G 0.54 0.83 0.68 A 0.46 0.17 0.32 0000 --- --- --- --- 013244 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013272 00000 ------------ C 0.54 0.83 0.68 T 0.46 0.17 0.32 0000 --- --- --- --- 013384 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013485 00000 ------------ A 0.77 0.91 0.84 T 0.23 0.09 0.16 0000 --- --- --- --- 013644 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 013834 00000 ------------ C 0.57 0.83 0.70 A 0.43 0.17 0.30 0000 --- --- --- --- 014094 00000 ------------ C 0.67 0.77 0.72 T 0.33 0.23 0.28 0000 --- --- --- --- 014183 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 014184 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014281 00000 ------------ - 0.92 0.98 0.95 + 0.08 0.02 0.05 0000 --- --- --- --- 014296 00000 ------------ A 0.95 0.85 0.90 G 0.05 0.15 0.10 0000 --- --- --- --- 014797 00000 ------------ - 0.85 0.91 0.88 + 0.15 0.09 0.12 0000 --- --- --- --- 014877 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014970 00000 ------------ G 0.48 0.67 0.57 T 0.52 0.33 0.43 0000 --- --- --- --- 014983 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015455 00000 ------------ C 0.88 0.91 0.90 A 0.12 0.09 0.10 0000 --- --- --- --- 015534 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015898 00000 ------------ G 0.41 0.72 0.57 A 0.59 0.28 0.43 0000 --- --- --- --- 016255 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 016468 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 016499 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016665 00000 ------------ T 0.75 1.00 0.87 C 0.25 0.00 0.13 0000 --- --- --- --- 016897 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 016981 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017041 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 017433 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 017439 00000 ------------ A 0.60 0.70 0.65 C 0.40 0.30 0.35 0000 --- --- --- --- 017696 -----** NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0827 GTG ATG VAL(V) MET(M) 017749 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017797 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017971 00000 ------------ A 0.31 0.70 0.50 G 0.69 0.30 0.50 0000 --- --- --- --- 018173 00000 ------------ T 0.73 1.00 0.86 C 0.27 0.00 0.14 0000 --- --- --- --- 018400 -----** NON-SYN G 0.96 1.00 0.98 T 0.04 0.00 0.02 0885 AGG ATG ARG(R) MET(M) 018544 00000 ------------ T 0.58 0.68 0.63 C 0.42 0.32 0.37 0000 --- --- --- --- 018581 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018893 -----** SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0946 CCC CCT PRO(P) PRO(P) 018999 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 019091 -----** NON-SYN A 1.00 0.98 0.99 T 0.00 0.02 0.01 0982 CAG CTG GLN(Q) LEU(L) 019145 00000 ------------ G 0.93 0.76 0.85 A 0.07 0.24 0.15 0000 --- --- --- --- 019258 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 019358 00000 ------------ T 0.47 0.80 0.63 G 0.53 0.20 0.37 0000 --- --- --- --- 019516 00000 ------------ - 0.73 0.30 0.52 + 0.27 0.70 0.48 0000 --- --- --- --- 019772 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019773 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019907 00000 ------------ A 0.58 0.70 0.64 G 0.42 0.30 0.36 0000 --- --- --- --- 019980 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 020348 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 020352 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 020628 00000 ------------ G 0.85 0.63 0.74 T 0.15 0.37 0.26 0000 --- --- --- --- 020819 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020961 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021449 -----** SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 1060 GAG GAA GLU(E) GLU(E) 021741 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021742 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021964 -----** SYNON T 0.85 1.00 0.93 C 0.15 0.00 0.07 1117 GTT GTC VAL(V) VAL(V) 023288 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 023375 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 023534 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023684 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023721 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023791 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 024023 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 024038 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024288 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024327 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 024513 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 024667 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024693 00000 ------------ G 0.96 0.59 0.78 C 0.04 0.41 0.22 0000 --- --- --- --- 024717 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024828 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024845 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 014281: A 014797: T 016255: C 017041: G 019516: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000117 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000228 00000 ------------ A 0.94 0.76 0.85 G 0.06 0.24 0.15 0000 --- --- --- --- 000317 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000539 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000968 00000 ------------ C 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 001038 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 001172 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001181 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001219 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001366 00000 ------------ A 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 001430 00000 ------------ A 0.75 0.65 0.70 G 0.25 0.35 0.30 0000 --- --- --- --- 001756 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001872 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002046 00047 5' UTR G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002227 00228 5' UTR C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 002265 00266 5' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 002335 00336 IN-FRAME DEL - 0.73 0.91 0.82 + 0.27 0.09 0.18 0015 --- CTG --- LEU(L) 002430 00431 NON-SYN G 1.00 0.98 0.99 T 0.00 0.02 0.01 0047 CGT CTT ARG(R) LEU(L) 002434 00435 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0048 TCC TCT SER(S) SER(S) 002451 00452 NON-SYN C 0.98 0.91 0.95 T 0.02 0.09 0.05 0054 GCC GTC ALA(A) VAL(V) 002515 00000 ------------ G 0.83 0.93 0.88 A 0.17 0.07 0.12 0000 --- --- --- --- 002527 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002587 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002644 00000 ------------ G 0.71 0.65 0.68 A 0.29 0.35 0.32 0000 --- --- --- --- 002709 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 002859 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 002886 00000 ------------ C 1.00 0.90 0.95 G 0.00 0.10 0.05 0000 --- --- --- --- 003089 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003169 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003244 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 003402 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003404 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 003616 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004068 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004097* 004139 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004295 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 004432 00000 ------------ C 0.74 0.37 0.57 T 0.26 0.63 0.43 0000 --- --- --- --- 004532 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004630 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004665 00000 ------------ T 0.46 0.72 0.59 C 0.54 0.28 0.41 0000 --- --- --- --- 004739 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 004913 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004953 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004969 00000 ------------ A 0.85 0.92 0.88 T 0.15 0.08 0.12 0000 --- --- --- --- 004976 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004995 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 005069 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 005161 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005504 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005672 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005996 00000 ------------ C 0.65 0.75 0.70 G 0.35 0.25 0.30 0000 --- --- --- --- 006105 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006138 00000 ------------ T 0.83 0.95 0.89 C 0.17 0.05 0.11 0000 --- --- --- --- 006655 00000 ------------ T 0.71 0.91 0.82 C 0.29 0.09 0.18 0000 --- --- --- --- 006722 00000 ------------ T 0.78 0.93 0.86 C 0.22 0.07 0.14 0000 --- --- --- --- 007532 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 007598 00000 ------------ - 0.29 0.12 0.20 + 0.71 0.88 0.80 0000 --- --- --- --- 007754 00000 ------------ T 0.98 0.91 0.94 C 0.02 0.09 0.06 0000 --- --- --- --- 007851 00000 ------------ T 0.85 0.93 0.88 C 0.15 0.07 0.12 0000 --- --- --- --- 007888 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008110 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008251 00000 ------------ T 0.91 0.98 0.94 G 0.09 0.02 0.06 0000 --- --- --- --- 008254 00000 ------------ C 0.76 0.38 0.57 T 0.24 0.62 0.43 0000 --- --- --- --- 008390 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 008407 00000 ------------ - 0.75 0.37 0.56 + 0.25 0.63 0.44 0000 --- --- --- --- 008417 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 008779 00000 ------------ A 0.71 0.70 0.71 G 0.29 0.30 0.29 0000 --- --- --- --- 008802 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009128 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009333 00000 ------------ C 0.39 0.83 0.61 T 0.61 0.17 0.39 0000 --- --- --- --- 009666 00000 ------------ G 0.98 0.80 0.89 C 0.02 0.20 0.11 0000 --- --- --- --- 009779 00000 ------------ G 0.64 0.93 0.79 A 0.36 0.07 0.21 0000 --- --- --- --- 009827 00000 ------------ C 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 009845 00000 ------------ T 0.77 0.43 0.60 C 0.23 0.57 0.40 0000 --- --- --- --- 009953 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 009967 00000 ------------ C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 010142 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 010305 00000 ------------ C 0.94 0.82 0.88 G 0.06 0.18 0.12 0000 --- --- --- --- 010509 00000 ------------ A 0.62 0.80 0.71 T 0.38 0.20 0.29 0000 --- --- --- --- 010802 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010830 00000 ------------ T 0.63 0.80 0.72 G 0.37 0.20 0.28 0000 --- --- --- --- 010857 00000 ------------ C 0.85 0.93 0.89 G 0.15 0.07 0.11 0000 --- --- --- --- 010942 00000 ------------ G 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 010966 00000 ------------ C 0.67 0.80 0.74 T 0.33 0.20 0.26 0000 --- --- --- --- 010999 00000 ------------ T 0.39 0.80 0.60 G 0.61 0.20 0.40 0000 --- --- --- --- 011198 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011315 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 011395 00000 ------------ A 0.94 0.80 0.87 T 0.06 0.20 0.13 0000 --- --- --- --- 011465 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011740 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 011831 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 012265 00000 ------------ C 0.71 0.39 0.55 T 0.29 0.61 0.45 0000 --- --- --- --- 012321 00000 ------------ T 0.42 0.80 0.61 C 0.58 0.20 0.39 0000 --- --- --- --- 012376 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012387 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012402 00000 ------------ A 0.80 1.00 0.90 G 0.20 0.00 0.10 0000 --- --- --- --- 012420 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 012454 00000 ------------ - 0.42 0.80 0.61 + 0.58 0.20 0.39 0000 --- --- --- --- 012509 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 012521 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 012788 00000 ------------ C 0.75 0.39 0.57 A 0.25 0.61 0.43 0000 --- --- --- --- 012813 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012972 00000 ------------ T 0.42 0.61 0.51 C 0.58 0.39 0.49 0000 --- --- --- --- 013119 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013292 00000 ------------ G 0.44 0.66 0.54 A 0.56 0.34 0.46 0000 --- --- --- --- 013422 00000 ------------ - 0.05 0.00 0.03 + 0.95 1.00 0.97 0000 --- --- --- --- 013458 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 013497 00000 ------------ C 0.95 0.88 0.91 T 0.05 0.12 0.09 0000 --- --- --- --- 013565 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 013619 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 013869 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 014085 00000 ------------ A 0.93 0.83 0.88 G 0.07 0.17 0.12 0000 --- --- --- --- 014128 00000 ------------ C 0.81 0.59 0.69 T 0.19 0.41 0.31 0000 --- --- --- --- 014247 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014290 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014298 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014447 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014645 00000 ------------ C 0.75 0.52 0.63 G 0.25 0.48 0.37 0000 --- --- --- --- 014667 00000 ------------ C 0.88 0.59 0.72 G 0.12 0.41 0.28 0000 --- --- --- --- 014724 00000 ------------ G 0.90 0.91 0.91 A 0.10 0.09 0.09 0000 --- --- --- --- 014877 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 014880 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014944 00000 ------------ C 0.79 0.91 0.85 A 0.21 0.09 0.15 0000 --- --- --- --- 014950 00000 ------------ A 0.44 0.59 0.51 G 0.56 0.41 0.49 0000 --- --- --- --- 014970 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014975 00000 ------------ - 0.23 0.63 0.43 + 0.77 0.37 0.57 0000 --- --- --- --- 015101 00000 ------------ T 0.68 0.52 0.60 C 0.32 0.48 0.40 0000 --- --- --- --- 015170 01014 SYNON C 0.98 0.98 0.98 T 0.02 0.02 0.02 0241 GGC GGT GLY(G) GLY(G) 015203 01047 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0252 CGC CGT ARG(R) ARG(R) 015252 00000 ------------ G 0.70 0.35 0.52 A 0.30 0.65 0.48 0000 --- --- --- --- 015313 00000 ------------ A 0.46 0.70 0.58 C 0.54 0.30 0.42 0000 --- --- --- --- 015407 00000 ------------ T 0.91 0.98 0.95 C 0.09 0.02 0.05 0000 --- --- --- --- 015467 00000 ------------ C 0.48 0.63 0.55 T 0.52 0.37 0.45 0000 --- --- --- --- 015537 00000 ------------ C 0.70 0.63 0.66 T 0.30 0.37 0.34 0000 --- --- --- --- 015745 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 015799 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015800 00000 ------------ T 0.44 0.70 0.56 G 0.56 0.30 0.44 0000 --- --- --- --- 015853 00000 ------------ A 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 015959 00000 ------------ A 0.40 0.63 0.51 G 0.60 0.37 0.49 0000 --- --- --- --- 016016 00000 ------------ A 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 016023 00000 ------------ T 0.44 0.67 0.55 C 0.56 0.33 0.45 0000 --- --- --- --- 016039 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 016344 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 016393 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016648 00000 ------------ C 0.95 0.97 0.96 T 0.05 0.03 0.04 0000 --- --- --- --- 016756 00000 ------------ G 0.95 0.92 0.93 A 0.05 0.08 0.07 0000 --- --- --- --- 016801 00000 ------------ A 0.90 0.89 0.90 C 0.10 0.11 0.10 0000 --- --- --- --- 016813 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016997 00000 ------------ G 0.73 0.39 0.56 A 0.27 0.61 0.44 0000 --- --- --- --- 017050 00000 ------------ C 0.62 0.78 0.70 T 0.38 0.22 0.30 0000 --- --- --- --- 017133 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017193 00000 ------------ G 0.73 0.39 0.56 C 0.27 0.61 0.44 0000 --- --- --- --- 017230 00000 ------------ A 0.85 0.91 0.88 G 0.15 0.09 0.12 0000 --- --- --- --- 017319 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017329 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017332 00000 ------------ A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 017412 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 017649 00000 ------------ G 0.62 0.88 0.74 A 0.38 0.12 0.26 0000 --- --- --- --- 017781 00000 ------------ - 0.69 0.37 0.53 + 0.31 0.63 0.47 0000 --- --- --- --- 017895 00000 ------------ G 0.69 0.36 0.53 A 0.31 0.64 0.47 0000 --- --- --- --- 017981 00000 ------------ C 0.89 0.89 0.89 T 0.11 0.11 0.11 0000 --- --- --- --- 018028 00000 ------------ T 0.76 0.39 0.58 G 0.24 0.61 0.42 0000 --- --- --- --- 018099 00000 ------------ G 0.69 0.37 0.53 T 0.31 0.63 0.47 0000 --- --- --- --- 018138 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 018675 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 018682 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 018699 00000 ------------ A 0.89 0.89 0.89 G 0.11 0.11 0.11 0000 --- --- --- --- 018869 00000 ------------ A 0.90 0.95 0.93 C 0.10 0.05 0.07 0000 --- --- --- --- 018902 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 018906 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 018927 00000 ------------ A 0.74 0.36 0.55 G 0.26 0.64 0.45 0000 --- --- --- --- 019027 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 019211 00000 ------------ G 0.67 0.84 0.75 A 0.33 0.16 0.25 0000 --- --- --- --- 019344 00000 ------------ G 0.54 0.98 0.75 T 0.46 0.02 0.25 0000 --- --- --- --- 019398 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 019399 00000 ------------ - 0.79 1.00 0.89 + 0.21 0.00 0.11 0000 --- --- --- --- 019409 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 019461 00000 ------------ C 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 019530 00000 ------------ - 0.20 0.14 0.17 + 0.80 0.86 0.83 0000 --- --- --- --- 019587 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 019659 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019771 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 019824 01320 SYNON G 0.95 1.00 0.98 A 0.05 0.00 0.02 0343 CAG CAA GLN(Q) GLN(Q) 020152 00000 ------------ G 0.79 0.89 0.84 A 0.21 0.11 0.16 0000 --- --- --- --- 020184 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020274 00000 ------------ T 0.78 0.88 0.83 C 0.22 0.12 0.17 0000 --- --- --- --- 020593 01568 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0426 AAT AGT ASN(N) SER(S) 020645 01620 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0443 GCC GCT ALA(A) ALA(A) 020646 01621 NON-SYN G 0.94 1.00 0.97 A 0.06 0.00 0.03 0444 GCC ACC ALA(A) THR(T) 020797 00000 ------------ T 0.83 0.85 0.84 G 0.17 0.15 0.16 0000 --- --- --- --- 020875 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020876 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020882 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020907 00000 ------------ T 0.79 0.87 0.83 C 0.21 0.13 0.17 0000 --- --- --- --- 020947 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 020951 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020988 01674 SYNON G 0.79 0.87 0.83 A 0.21 0.13 0.17 0461 GTG GTA VAL(V) VAL(V) 021028 01714 NON-SYN A 0.79 0.87 0.83 G 0.21 0.13 0.17 0475 ATC GTC ILE(I) VAL(V) 021039 01725 SYNON C 0.91 1.00 0.96 T 0.09 0.00 0.04 0478 TGC TGT CYS(C) CYS(C) 021392 00000 ------------ A 0.54 0.81 0.67 G 0.46 0.19 0.33 0000 --- --- --- --- 021607 00000 ------------ G 0.87 0.97 0.92 A 0.13 0.03 0.08 0000 --- --- --- --- 021633 00000 ------------ A 0.30 0.79 0.53 G 0.70 0.21 0.47 0000 --- --- --- --- 021762 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021934 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022104 01952 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0554 CAC CGC HIS(H) ARG(R) 022190 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 022191 00000 ------------ A 0.30 0.77 0.53 G 0.70 0.23 0.47 0000 --- --- --- --- 022517 00000 ------------ G 0.79 0.92 0.85 T 0.21 0.08 0.15 0000 --- --- --- --- 022659 00000 ------------ T 0.78 0.92 0.84 C 0.22 0.08 0.16 0000 --- --- --- --- 022956 00000 ------------ A 0.92 1.00 0.95 C 0.08 0.00 0.05 0000 --- --- --- --- 023087 00000 ------------ G 0.27 0.79 0.51 A 0.73 0.21 0.49 0000 --- --- --- --- 023146 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023219 00000 ------------ T 0.73 0.98 0.85 G 0.27 0.02 0.15 0000 --- --- --- --- 023251 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023260 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023476 00000 ------------ A 0.79 0.85 0.82 G 0.21 0.15 0.18 0000 --- --- --- --- 023507 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023551 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023631 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 024013 02150 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0620 CAG CCG GLN(Q) PRO(P) 024114 00000 ------------ A 0.29 0.79 0.52 G 0.71 0.21 0.48 0000 --- --- --- --- 024126 00000 ------------ C 0.90 1.00 0.94 T 0.10 0.00 0.06 0000 --- --- --- --- 024270 00000 ------------ G 0.77 0.86 0.81 A 0.23 0.14 0.19 0000 --- --- --- --- 024272 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024612 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024613 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024709 00000 ------------ T 0.79 0.87 0.83 C 0.21 0.13 0.17 0000 --- --- --- --- 025226 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 025252 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025397 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025420 00000 ------------ G 0.70 0.98 0.83 A 0.30 0.02 0.17 0000 --- --- --- --- 025462 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 025598 00000 ------------ G 0.50 0.96 0.72 C 0.50 0.04 0.28 0000 --- --- --- --- 025795 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025838 02163 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0624 ACC ACT THR(T) THR(T) 025978 02303 NON-SYN A 0.62 0.98 0.80 G 0.38 0.02 0.20 0671 GAG GGG GLU(E) GLY(G) 026006 02331 TRUNCATION C 0.98 1.00 0.99 A 0.02 0.00 0.01 0680 TGC TGA CYS(C) *** 026123 02448 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 026393 02718 3' UTR C 0.93 0.98 0.96 T 0.07 0.02 0.04 0000 --- --- --- --- 026462 02787 3' UTR C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 026492 02817 3' UTR G 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 026500 02825 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026619 02944 3' UTR T 0.31 0.83 0.58 C 0.69 0.17 0.42 0000 --- --- --- --- 026662 02987 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026812 03137 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026891 03216 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026897 03222 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027018 03343 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027410 00000 ------------ - 0.98 0.87 0.93 + 0.02 0.13 0.07 0000 --- --- --- --- 027422 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 027459 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 027626 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 027883 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027931 00000 ------------ C 0.58 0.85 0.71 T 0.42 0.15 0.29 0000 --- --- --- --- 027934 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028323 00000 ------------ G 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 028430 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 028537 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028566 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028589 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028723 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 028787 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 028910 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028940 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001038: GT 002335: GCT 007532: G 007598: AAG 008407: C 012420: A 012454: CGA 013422: C 014975: C 017781: G 018682: TAGGGGG 019399: T 019409: G 019530: GGTCT 019771: C 027410: GAGT 028723: GTA The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 004097 A 0.00 0.02 0.01 G 0.83 0.98 0.90 T 0.17 0.00 0.09 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000129 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 000158 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000753 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002068 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002096 00000 ------------ G 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 002546 00399 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0053 GTG ATG VAL(V) MET(M) 002766 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003040 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 003536 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003623 00000 ------------ A 0.46 0.70 0.57 T 0.54 0.30 0.43 0000 --- --- --- --- 003762 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003814 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004048 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004845 00853 NON-SYN C 0.92 1.00 0.96 T 0.08 0.00 0.04 0204 CCC CTC PRO(P) LEU(L) 004982 00990 NON-SYN G 0.94 1.00 0.97 A 0.06 0.00 0.03 0250 GGC AGC GLY(G) SER(S) 005054 00000 ------------ G 0.48 0.67 0.58 T 0.52 0.33 0.42 0000 --- --- --- --- 005843 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006295 00000 ------------ T 0.73 0.67 0.70 C 0.27 0.33 0.30 0000 --- --- --- --- 006700 00000 ------------ G 0.70 0.91 0.80 A 0.30 0.09 0.20 0000 --- --- --- --- 006860 00000 ------------ G 0.65 0.91 0.78 T 0.35 0.09 0.22 0000 --- --- --- --- 006951 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007615 00000 ------------ T 0.63 0.70 0.67 C 0.37 0.30 0.33 0000 --- --- --- --- 007740 01526 SYNON C 0.70 0.70 0.70 T 0.30 0.30 0.30 0428 AAC AAT ASN(N) ASN(N) 007926 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008061 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 008402 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 008437 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 009513 00000 ------------ A 0.40 0.67 0.53 T 0.60 0.33 0.47 0000 --- --- --- --- 009599 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000142 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000288 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000450 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001137 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001176 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001452 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001664 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 001691 00000 ------------ A 0.72 1.00 0.86 G 0.28 0.00 0.14 0000 --- --- --- --- 001986 00000 ------------ T 0.43 0.93 0.68 C 0.57 0.07 0.32 0000 --- --- --- --- 002097 00097 5' UTR A 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 002201 00000 ------------ A 0.54 0.93 0.73 G 0.46 0.07 0.27 0000 --- --- --- --- 002210 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 002478 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 002545 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002586 00000 ------------ G 0.61 0.93 0.77 T 0.39 0.07 0.23 0000 --- --- --- --- 002610 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 002660 00000 ------------ G 0.86 0.93 0.90 A 0.14 0.07 0.10 0000 --- --- --- --- 002835 00000 ------------ A 0.88 0.93 0.90 T 0.12 0.07 0.10 0000 --- --- --- --- 002963 00000 ------------ T 0.62 1.00 0.81 C 0.38 0.00 0.19 0000 --- --- --- --- 002972 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 003073 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003170 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 004391 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005048 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005064 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 005935 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006388 00000 ------------ C 0.98 0.88 0.93 T 0.02 0.12 0.07 0000 --- --- --- --- 006900 00000 ------------ A 0.72 0.91 0.82 G 0.28 0.09 0.18 0000 --- --- --- --- 006902 00000 ------------ A 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 006971 00000 ------------ T 0.72 0.91 0.82 C 0.28 0.09 0.18 0000 --- --- --- --- 007061 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 007123 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007204 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 007214 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 007222 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 007249 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007348 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007786 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 007819 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 007948 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007973 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008073 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008350 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008602 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008650 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008980 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 009148 00000 ------------ A 0.30 0.76 0.53 T 0.70 0.24 0.47 0000 --- --- --- --- 009153 00000 ------------ - 0.30 0.76 0.53 + 0.70 0.24 0.47 0000 --- --- --- --- 009481 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009823 00000 ------------ A 0.71 0.76 0.73 C 0.29 0.24 0.27 0000 --- --- --- --- 009892 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009944 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 009949 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 010649 00000 ------------ C 0.74 1.00 0.87 G 0.26 0.00 0.13 0000 --- --- --- --- 010795 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010988 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011428 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011720 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 011883 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012047 00000 ------------ G 0.96 0.48 0.72 A 0.04 0.52 0.28 0000 --- --- --- --- 012196 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012202 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012259 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012264 00000 ------------ T 0.80 0.91 0.86 C 0.20 0.09 0.14 0000 --- --- --- --- 012508 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013109 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 013274 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013312 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013563 00000 ------------ A 0.98 0.91 0.94 G 0.02 0.09 0.06 0000 --- --- --- --- 014449 00000 ------------ - 0.89 0.82 0.86 + 0.11 0.18 0.14 0000 --- --- --- --- 014508 00000 ------------ T 0.33 0.76 0.54 C 0.67 0.24 0.46 0000 --- --- --- --- 014780 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 014876 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014881 00000 ------------ - 0.33 0.76 0.54 + 0.67 0.24 0.46 0000 --- --- --- --- 015263 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015286 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 015297 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015298 00000 ------------ A 0.40 0.76 0.57 G 0.60 0.24 0.43 0000 --- --- --- --- 015634 00000 ------------ A 0.86 0.91 0.89 T 0.14 0.09 0.11 0000 --- --- --- --- 015671 00000 ------------ C 0.68 0.46 0.56 T 0.32 0.54 0.44 0000 --- --- --- --- 016039 00000 ------------ G 0.40 0.73 0.57 C 0.60 0.27 0.43 0000 --- --- --- --- 016201 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 016279 00000 ------------ G 0.46 0.85 0.65 A 0.54 0.15 0.35 0000 --- --- --- --- 016350 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016351 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016994 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017307 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017337 00000 ------------ T 0.81 1.00 0.91 C 0.19 0.00 0.09 0000 --- --- --- --- 017825 00000 ------------ A 0.37 0.70 0.53 C 0.63 0.30 0.47 0000 --- --- --- --- 017860 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017874 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018231 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018289 00310 NON-SYN C 0.95 1.00 0.98 A 0.05 0.00 0.02 0034 GCC GAC ALA(A) ASP(D) 018534* 018573 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 018584 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 018586 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018670 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018851 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019101 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 019727 00000 ------------ A 0.39 0.70 0.54 G 0.61 0.30 0.46 0000 --- --- --- --- 020982 00000 ------------ A 0.34 0.70 0.52 G 0.66 0.30 0.48 0000 --- --- --- --- 021003 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 021105 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 021256 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 021261 00000 ------------ C 0.95 0.89 0.92 T 0.05 0.11 0.08 0000 --- --- --- --- 021278 00000 ------------ G 0.97 0.83 0.89 A 0.03 0.17 0.11 0000 --- --- --- --- 021382 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 021539 00000 ------------ G 0.90 0.50 0.66 A 0.10 0.50 0.34 0000 --- --- --- --- 021603 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 022147 00617 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0136 AGG AGC ARG(R) SER(S) 022153 00623 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0138 ACG ACA THR(T) THR(T) 022175 00645 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0146 GCC ACC ALA(A) THR(T) 022229 00699 NON-SYN C 1.00 0.95 0.98 T 0.00 0.05 0.02 0164 CGG TGG ARG(R) TRP(W) 022240 00710 SYNON T 0.37 0.73 0.54 C 0.63 0.27 0.46 0167 GAT GAC ASP(D) ASP(D) 022297 00000 ------------ G 0.96 0.89 0.92 A 0.04 0.11 0.08 0000 --- --- --- --- 022323 00000 ------------ C 0.72 0.82 0.77 T 0.28 0.18 0.23 0000 --- --- --- --- 022434 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022530 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 022563 00000 ------------ - 0.03 0.03 0.03 + 0.97 0.97 0.97 0000 --- --- --- --- 022568 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 022646 00000 ------------ - 0.54 0.19 0.39 + 0.46 0.81 0.61 0000 --- --- --- --- 023561 00000 ------------ G 1.00 0.95 0.97 T 0.00 0.05 0.03 0000 --- --- --- --- 023688 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023702 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023705 00000 ------------ T 0.52 0.70 0.61 C 0.48 0.30 0.39 0000 --- --- --- --- 023730 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 024053 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 024253 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024414 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024511 00752 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0181 AAC AAT ASN(N) ASN(N) 024607 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024679 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024788 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024827 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 025073 00000 ------------ C 1.00 0.86 0.93 T 0.00 0.14 0.07 0000 --- --- --- --- 025165 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025508 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 025619 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025755 00000 ------------ A 0.98 0.87 0.92 G 0.02 0.13 0.08 0000 --- --- --- --- 025758 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 025993 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026120 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026223 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 026596 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 027248 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 027291 00000 ------------ T 0.86 1.00 0.91 C 0.14 0.00 0.09 0000 --- --- --- --- 027516 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 027713 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 027896 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028015 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029224 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029272 00000 ------------ T 0.95 0.82 0.89 A 0.05 0.17 0.11 0000 --- --- --- --- 029381* 029393 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 029566 00000 ------------ G 1.00 0.87 0.93 A 0.00 0.13 0.07 0000 --- --- --- --- 029568 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 029839 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 029851 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 029991 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030063 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030433 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 030619 01063 NON-SYN T 1.00 0.86 0.93 C 0.00 0.14 0.07 0285 CTC CCC LEU(L) PRO(P) 031182 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031411 00000 ------------ - 0.92 0.87 0.89 + 0.08 0.13 0.11 0000 --- --- --- --- 031464 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 031734 00000 ------------ G 0.93 0.96 0.95 C 0.07 0.04 0.05 0000 --- --- --- --- 031843 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 032217 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 032235 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 032398 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 032492 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032541 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032651 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032707 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 032775 00000 ------------ - 0.16 0.00 0.08 + 0.84 1.00 0.92 0000 --- --- --- --- 032918 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033031 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 033062 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 033118 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 033186 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 033284 00000 ------------ A 1.00 0.87 0.94 G 0.00 0.13 0.06 0000 --- --- --- --- 033362 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 033758 01456 3' UTR C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 034108 01806 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034168 01866 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 034231 01929 3' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 034580 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 034740 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 034818 00000 ------------ A 1.00 0.87 0.93 G 0.00 0.13 0.07 0000 --- --- --- --- 034858 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035066 00000 ------------ A 0.42 0.70 0.55 G 0.58 0.30 0.45 0000 --- --- --- --- 035171 00000 ------------ T 0.54 0.84 0.68 C 0.46 0.16 0.32 0000 --- --- --- --- 035205 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 035311 00000 ------------ C 0.44 0.70 0.59 T 0.56 0.30 0.41 0000 --- --- --- --- 035346 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 035514 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 035571 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 035725 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 035740 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035837 00000 ------------ G 0.96 0.85 0.90 A 0.04 0.15 0.10 0000 --- --- --- --- 035968 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001137: T 002210: T 007786: GA 009153: T 014449: G 014881: G 018584: G 022563: TG 022568: GATT 022646: GATA 026223: A 029851: CCCCGGGTCAGGCACTGACGCCAGTCCCG 031411: G 032707: A 032775: TAAA 034740: GAATCTTAAGGAAAAAATA 035725: GTC The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 018534 A 0.36 0.00 0.17 C 0.62 1.00 0.81 G 0.02 0.00 0.01 029381 A 0.04 0.00 0.02 C 0.93 1.00 0.97 G 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000082 00000 ------------ T 0.54 0.70 0.62 G 0.46 0.30 0.38 0000 --- --- --- --- 000211 00000 ------------ T 0.77 0.72 0.74 C 0.23 0.28 0.26 0000 --- --- --- --- 000835 00000 ------------ A 0.77 0.98 0.87 C 0.23 0.02 0.13 0000 --- --- --- --- 001004 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002182 -----** 5' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002189 -----** 5' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002249 -----** NON-SYN G 1.00 0.98 0.99 T 0.00 0.02 0.01 0015 GTG TTG VAL(V) LEU(L) 002291 00000 ------------ C 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 002366 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002768 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003123 00000 ------------ C 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 003271 00000 ------------ G 0.59 0.46 0.52 T 0.41 0.54 0.48 0000 --- --- --- --- 003272 00000 ------------ + 0.46 0.54 0.50 - 0.54 0.46 0.50 0000 --- --- --- --- 003369 00000 ------------ G 0.79 0.73 0.76 A 0.21 0.27 0.24 0000 --- --- --- --- 003479 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 003855 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 003906 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003995 -----** NON-SYN C 0.98 0.66 0.83 T 0.02 0.34 0.17 0141 CCG CTG PRO(P) LEU(L) 004490 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004625 00000 ------------ T 0.46 0.57 0.51 C 0.54 0.43 0.49 0000 --- --- --- --- 004642 -----** NON-SYN A 0.77 1.00 0.88 C 0.23 0.00 0.12 0231 AAG CAG LYS(K) GLN(Q) 004773 -----** SYNON C 0.94 0.89 0.91 T 0.06 0.11 0.09 0274 AAC AAT ASN(N) ASN(N) 005146 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005195 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005225 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005634 00000 ------------ C 0.75 0.48 0.62 T 0.25 0.52 0.38 0000 --- --- --- --- 005677 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005848 00000 ------------ 0000 006113 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006613 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007358 -----** 3' UTR T 0.45 0.62 0.54 C 0.55 0.38 0.46 0000 --- --- --- --- 008061 -----** 3' UTR + 0.54 0.43 0.49 - 0.46 0.57 0.51 0000 --- --- --- --- 008674 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008734 00000 ------------ A 0.50 0.59 0.54 C 0.50 0.41 0.46 0000 --- --- --- --- 009174 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009233 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009609 00000 ------------ A 0.46 0.55 0.50 G 0.54 0.45 0.50 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003272: T 008061: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001312 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001438 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001445 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001658 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 001664 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001783 00000 ------------ C 0.83 0.74 0.79 A 0.17 0.26 0.21 0000 --- --- --- --- 001835 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001922 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001966 00000 ------------ A 0.92 0.78 0.85 G 0.08 0.22 0.15 0000 --- --- --- --- 002174 00120 5' UTR C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002313 00259 5' UTR G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 002796 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 003498 00000 ------------ G 1.00 0.94 0.98 A 0.00 0.06 0.02 0000 --- --- --- --- 003504 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 003623 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003864 00000 ------------ T 0.45 0.59 0.52 G 0.55 0.41 0.48 0000 --- --- --- --- 003903 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004141 00000 ------------ A 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 004422 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004566 00000 ------------ G 0.67 0.41 0.54 A 0.33 0.59 0.46 0000 --- --- --- --- 004624 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004630 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004729 00000 ------------ G 0.80 0.63 0.72 A 0.20 0.37 0.28 0000 --- --- --- --- 005019 00591 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0055 GAA GGA GLU(E) GLY(G) 005039 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005165 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005172 00000 ------------ A 0.44 0.59 0.51 T 0.56 0.41 0.49 0000 --- --- --- --- 005304 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005405 00000 ------------ A 0.67 0.41 0.54 G 0.33 0.59 0.46 0000 --- --- --- --- 005471 00000 ------------ G 0.79 0.63 0.71 A 0.21 0.37 0.29 0000 --- --- --- --- 005545 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005579 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005612 00000 ------------ G 0.92 0.78 0.85 A 0.08 0.22 0.15 0000 --- --- --- --- 005834 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005995 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006024 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 006165 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 006172 00000 ------------ A 0.67 0.41 0.54 T 0.33 0.59 0.46 0000 --- --- --- --- 006251 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006273 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006301 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 006337 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006743 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006861 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006918 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007020 00000 ------------ G 0.83 0.78 0.80 C 0.17 0.23 0.20 0000 --- --- --- --- 007236 00683 NON-SYN A 0.81 1.00 0.90 G 0.19 0.00 0.10 0086 ACC GCC THR(T) ALA(A) 007293 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007327 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007423 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007517 00000 ------------ C 0.71 1.00 0.85 T 0.29 0.00 0.15 0000 --- --- --- --- 007742 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007816 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008477 00000 ------------ G 0.56 0.75 0.65 A 0.44 0.25 0.35 0000 --- --- --- --- 008761 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 009183 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009870 00000 ------------ T 0.66 0.72 0.69 C 0.34 0.28 0.31 0000 --- --- --- --- 010334 00000 ------------ G 0.65 0.74 0.70 A 0.35 0.26 0.30 0000 --- --- --- --- 010383 00000 ------------ G 0.65 0.48 0.56 A 0.35 0.52 0.44 0000 --- --- --- --- 010571 00000 ------------ T 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 010595 00000 ------------ G 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 010923 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010975 00000 ------------ C 0.96 0.92 0.94 T 0.04 0.08 0.06 0000 --- --- --- --- 011304 00000 ------------ C 0.96 0.89 0.92 T 0.04 0.11 0.08 0000 --- --- --- --- 011649 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011667 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 011693 00000 ------------ A 0.98 0.89 0.93 G 0.02 0.11 0.07 0000 --- --- --- --- 011705 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012060 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012149 00000 ------------ C 0.93 0.90 0.92 T 0.07 0.10 0.08 0000 --- --- --- --- 012280 00000 ------------ G 0.93 0.89 0.91 A 0.07 0.11 0.09 0000 --- --- --- --- 012321 00000 ------------ A 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 012372 00000 ------------ G 0.93 0.89 0.91 A 0.07 0.11 0.09 0000 --- --- --- --- 012563 00000 ------------ T 0.84 0.98 0.92 C 0.16 0.02 0.08 0000 --- --- --- --- 012774 00000 ------------ T 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 012814 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 012913 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012922 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 012987 00000 ------------ T 0.67 0.74 0.70 A 0.33 0.26 0.30 0000 --- --- --- --- 013014 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013022* 013174 00000 ------------ C 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 013261 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013297 00000 ------------ C 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 013461 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013707 00000 ------------ A 0.64 0.90 0.76 G 0.36 0.10 0.24 0000 --- --- --- --- 013735 00000 ------------ A 0.86 0.88 0.87 C 0.14 0.12 0.13 0000 --- --- --- --- 013814 00000 ------------ C 0.68 0.38 0.54 T 0.32 0.62 0.46 0000 --- --- --- --- 014269 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 014471 00000 ------------ T 0.92 0.91 0.91 C 0.08 0.09 0.09 0000 --- --- --- --- 014535 00000 ------------ T 0.77 0.91 0.84 C 0.23 0.09 0.16 0000 --- --- --- --- 014623 00000 ------------ C 0.91 0.91 0.91 T 0.09 0.09 0.09 0000 --- --- --- --- 014624 00000 ------------ A 0.91 0.91 0.91 G 0.09 0.09 0.09 0000 --- --- --- --- 014653 00000 ------------ C 0.91 0.91 0.91 A 0.09 0.09 0.09 0000 --- --- --- --- 014987 00000 ------------ A 0.93 0.91 0.92 G 0.07 0.09 0.08 0000 --- --- --- --- 015150 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015195 00000 ------------ C 0.92 0.91 0.91 G 0.08 0.09 0.09 0000 --- --- --- --- 015220 00000 ------------ C 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 015270 00000 ------------ G 0.92 0.91 0.91 C 0.08 0.09 0.09 0000 --- --- --- --- 015275 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015282 00000 ------------ A 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 015452 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015619 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015687 00000 ------------ T 0.92 0.91 0.91 A 0.08 0.09 0.09 0000 --- --- --- --- 015718 00000 ------------ G 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 015900 00000 ------------ T 0.94 0.91 0.93 C 0.06 0.09 0.07 0000 --- --- --- --- 015979 00741 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0105 CGG CAG ARG(R) GLN(Q) 016351 00000 ------------ A 0.81 0.98 0.89 T 0.19 0.02 0.11 0000 --- --- --- --- 016355 00000 ------------ A 0.60 0.89 0.74 T 0.40 0.11 0.26 0000 --- --- --- --- 016566 00000 ------------ A 0.54 0.80 0.67 G 0.46 0.20 0.33 0000 --- --- --- --- 016635 00000 ------------ C 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 016684 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016892 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 016949 00000 ------------ A 0.79 0.98 0.88 G 0.21 0.02 0.12 0000 --- --- --- --- 016984 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 017279 00000 ------------ C 0.81 0.97 0.88 T 0.19 0.03 0.12 0000 --- --- --- --- 017352 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 017391 00000 ------------ C 0.90 0.88 0.89 T 0.10 0.12 0.11 0000 --- --- --- --- 017403 00000 ------------ A 0.92 0.87 0.90 C 0.08 0.13 0.10 0000 --- --- --- --- 017456 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017488 00000 ------------ A 0.95 0.89 0.93 G 0.05 0.11 0.07 0000 --- --- --- --- 017511 00000 ------------ - 0.98 0.91 0.95 + 0.02 0.09 0.05 0000 --- --- --- --- 017728 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 017777 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017784 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017912 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 018139 00000 ------------ G 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 018241 00000 ------------ C 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 018538 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 018562 00000 ------------ G 0.94 0.93 0.93 A 0.06 0.07 0.07 0000 --- --- --- --- 018584 00000 ------------ C 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 018753 00000 ------------ C 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 018765 00000 ------------ C 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 018791 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018912 00000 ------------ A 0.93 0.91 0.92 G 0.07 0.09 0.08 0000 --- --- --- --- 018993 00000 ------------ G 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 019157 00000 ------------ G 0.93 0.91 0.92 C 0.07 0.09 0.08 0000 --- --- --- --- 019613 00000 ------------ T 0.75 0.96 0.85 C 0.25 0.04 0.15 0000 --- --- --- --- 019697 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019732 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020028 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 020056 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020068 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 020169 00000 ------------ C 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 020297 01086 NON-SYN A 0.83 0.91 0.87 G 0.17 0.09 0.13 0220 AAG AGG LYS(K) ARG(R) 020382 01171 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0248 ACC ACT THR(T) THR(T) 020391 01180 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0251 CAC CAT HIS(H) HIS(H) 020435 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020609 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 020651 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 020700 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020901 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 021162 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 021414 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 021590 00000 ------------ T 0.97 0.91 0.94 C 0.03 0.09 0.06 0000 --- --- --- --- 021611 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 023456 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023468 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023514 01222 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0265 ACC ACT THR(T) THR(T) 023562 01270 NON-SYN C 0.96 1.00 0.98 A 0.04 0.00 0.02 0281 AAC AAA ASN(N) LYS(K) 023669 01377 NON-SYN T 0.98 0.88 0.93 C 0.02 0.12 0.07 0317 CTC CCC LEU(L) PRO(P) 023715 01423 SYNON C 0.98 1.00 0.99 A 0.02 0.00 0.01 0332 CTC CTA LEU(L) LEU(L) 023766 01474 3' UTR G 0.76 1.00 0.87 A 0.24 0.00 0.13 0000 --- --- --- --- 023833 01541 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024184 00000 ------------ T 0.71 1.00 0.86 A 0.29 0.00 0.14 0000 --- --- --- --- 024274 00000 ------------ T 0.73 1.00 0.87 C 0.27 0.00 0.13 0000 --- --- --- --- 024343 00000 ------------ C 0.73 1.00 0.87 G 0.27 0.00 0.13 0000 --- --- --- --- 024355 00000 ------------ T 0.73 1.00 0.87 C 0.27 0.00 0.13 0000 --- --- --- --- 024402 00000 ------------ T 0.73 1.00 0.87 C 0.27 0.00 0.13 0000 --- --- --- --- 024483 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024610 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024618 00000 ------------ G 0.73 1.00 0.87 A 0.27 0.00 0.13 0000 --- --- --- --- 024678 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 024695 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 024782 00000 ------------ C 0.73 1.00 0.85 T 0.27 0.00 0.15 0000 --- --- --- --- 024809 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 025009 00000 ------------ T 0.73 1.00 0.86 G 0.27 0.00 0.14 0000 --- --- --- --- 025081 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 025092 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 025158 00000 ------------ A 0.77 0.93 0.85 G 0.23 0.07 0.15 0000 --- --- --- --- 025254 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001438: ACAAAA 006024: AAAA 014269: G 017511: G 024695: CT 024809: CTTTTCTTTT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 013022 C 0.42 0.30 0.36 G 0.33 0.26 0.30 T 0.25 0.43 0.34 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000357 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 000380 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000406 00000 ------------ G 0.90 0.54 0.72 A 0.10 0.46 0.28 0000 --- --- --- --- 000447 00000 ------------ A 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 000499 00000 ------------ C 0.62 0.41 0.52 T 0.38 0.59 0.48 0000 --- --- --- --- 000586 00000 ------------ C 0.67 0.57 0.62 T 0.33 0.43 0.38 0000 --- --- --- --- 000708 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 000709 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 000710 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 000911 00000 ------------ A 0.92 0.41 0.63 G 0.08 0.59 0.37 0000 --- --- --- --- 001154 00000 ------------ A 0.88 0.84 0.86 G 0.12 0.16 0.14 0000 --- --- --- --- 001280 00000 ------------ C 0.88 0.84 0.86 T 0.12 0.16 0.14 0000 --- --- --- --- 001316 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001412 00000 ------------ T 0.96 0.83 0.89 C 0.04 0.17 0.11 0000 --- --- --- --- 001417 00000 ------------ C 0.96 0.83 0.89 T 0.04 0.17 0.11 0000 --- --- --- --- 001470 00000 ------------ A 0.96 0.80 0.88 G 0.04 0.20 0.12 0000 --- --- --- --- 001721 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001722 00000 ------------ G 0.88 0.96 0.91 A 0.12 0.04 0.09 0000 --- --- --- --- 001903 00000 ------------ G 0.62 0.43 0.53 A 0.38 0.57 0.47 0000 --- --- --- --- 001959 00000 ------------ T 0.62 0.43 0.53 C 0.38 0.57 0.47 0000 --- --- --- --- 001983 00000 ------------ A 0.85 0.83 0.84 G 0.15 0.17 0.16 0000 --- --- --- --- 002030 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002053 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 002096 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002117 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 002127 00000 ------------ G 0.61 0.43 0.52 A 0.39 0.57 0.48 0000 --- --- --- --- 002190 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 002354 00000 ------------ G 0.62 0.41 0.52 T 0.38 0.59 0.48 0000 --- --- --- --- 002381 00000 ------------ T 0.62 0.41 0.52 C 0.38 0.59 0.48 0000 --- --- --- --- 002498 00020 5' UTR G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 002544 00066 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0004 AAG AAA LYS(K) LYS(K) 002609 00000 ------------ G 0.67 0.54 0.61 T 0.33 0.46 0.39 0000 --- --- --- --- 002620 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 002647 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 002737 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002783 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002967 00000 ------------ T 0.61 0.41 0.51 C 0.39 0.59 0.49 0000 --- --- --- --- 006321 00000 ------------ G 0.89 0.74 0.82 A 0.11 0.26 0.18 0000 --- --- --- --- 006431 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006462 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006523 00000 ------------ - 0.09 0.09 0.09 + 0.91 0.91 0.91 0000 --- --- --- --- 006754 00223 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0057 GAA AAA GLU(E) LYS(K) 007437 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007460 00000 ------------ A 0.76 0.70 0.73 T 0.24 0.30 0.27 0000 --- --- --- --- 007595 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007727 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 007813 00000 ------------ G 0.81 0.63 0.72 A 0.19 0.37 0.28 0000 --- --- --- --- 008118 00000 ------------ A 0.72 0.70 0.71 G 0.28 0.30 0.29 0000 --- --- --- --- 010995 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011014 00000 ------------ C 0.50 0.70 0.60 T 0.50 0.30 0.40 0000 --- --- --- --- 011142 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011233 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 011342 00384 SYNON C 0.50 0.70 0.60 T 0.50 0.30 0.40 0110 AAC AAT ASN(N) ASN(N) 011411 00453 NON-SYN C 1.00 0.98 0.99 A 0.00 0.02 0.01 0133 CAC CAA HIS(H) GLN(Q) 011613 00000 ------------ T 0.50 0.72 0.61 G 0.50 0.28 0.39 0000 --- --- --- --- 011681 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011774 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011913 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 011921 00000 ------------ T 0.50 0.67 0.58 C 0.50 0.33 0.42 0000 --- --- --- --- 012000 00000 ------------ T 0.50 0.67 0.58 C 0.50 0.33 0.42 0000 --- --- --- --- 012242 00000 ------------ C 0.50 0.71 0.61 T 0.50 0.29 0.39 0000 --- --- --- --- 012321 00000 ------------ G 0.50 0.72 0.61 C 0.50 0.28 0.39 0000 --- --- --- --- 012440 00000 ------------ G 0.48 0.72 0.60 A 0.52 0.28 0.40 0000 --- --- --- --- 012531 00000 ------------ T 0.75 0.57 0.66 C 0.25 0.43 0.34 0000 --- --- --- --- 012539 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 012740 00000 ------------ A 0.71 0.74 0.72 T 0.29 0.26 0.28 0000 --- --- --- --- 012755 00000 ------------ A 0.77 0.98 0.87 G 0.23 0.02 0.13 0000 --- --- --- --- 012847 00000 ------------ G 0.77 0.57 0.67 A 0.23 0.43 0.33 0000 --- --- --- --- 012881 00000 ------------ A 0.71 0.74 0.72 G 0.29 0.26 0.28 0000 --- --- --- --- 012905 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 013134 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013469 00000 ------------ C 0.90 0.74 0.82 G 0.10 0.26 0.18 0000 --- --- --- --- 014509 00000 ------------ G 0.71 0.98 0.84 A 0.29 0.02 0.16 0000 --- --- --- --- 014673 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014703 00000 ------------ - 0.79 0.65 0.72 + 0.21 0.35 0.28 0000 --- --- --- --- 014875 00000 ------------ - 0.10 0.34 0.22 + 0.90 0.66 0.78 0000 --- --- --- --- 014888 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014889 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014905 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 014951 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015255 00000 ------------ T 0.77 0.67 0.72 A 0.23 0.33 0.28 0000 --- --- --- --- 016455 00000 ------------ A 0.71 0.98 0.84 G 0.29 0.02 0.16 0000 --- --- --- --- 016715 00000 ------------ T 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- 016720 00000 ------------ A 0.75 0.72 0.73 T 0.25 0.28 0.27 0000 --- --- --- --- 016860 00000 ------------ T 0.79 0.75 0.77 G 0.21 0.25 0.23 0000 --- --- --- --- 016976 00825 SYNON C 0.54 0.48 0.51 T 0.46 0.52 0.49 0257 TGC TGT CYS(C) CYS(C) 016987 00836 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0261 CGC CAC ARG(R) HIS(H) 017953 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018045 00000 ------------ C 0.90 0.95 0.92 G 0.10 0.05 0.08 0000 --- --- --- --- 018114 00000 ------------ G 0.75 0.75 0.75 A 0.25 0.25 0.25 0000 --- --- --- --- 018255 00000 ------------ T 0.57 0.46 0.51 C 0.43 0.54 0.49 0000 --- --- --- --- 018475 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 018486 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 018679 00996 SYNON C 0.75 0.57 0.66 T 0.25 0.43 0.34 0314 TTC TTT PHE(F) PHE(F) 018701 00000 ------------ G 0.75 0.57 0.66 A 0.25 0.43 0.34 0000 --- --- --- --- 019056 01137 SYNON A 0.79 0.74 0.77 G 0.21 0.26 0.23 0361 CAA CAG GLN(Q) GLN(Q) 019335 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022389 00000 ------------ T 0.48 0.72 0.60 C 0.52 0.28 0.40 0000 --- --- --- --- 022398 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 022432 00000 ------------ A 0.75 0.98 0.86 C 0.25 0.02 0.14 0000 --- --- --- --- 022575 00000 ------------ A 0.90 0.74 0.82 G 0.10 0.26 0.18 0000 --- --- --- --- 022598 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 022764 01276 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0408 CGG TGG ARG(R) TRP(W) 022807 00000 ------------ T 0.81 0.74 0.78 C 0.19 0.26 0.22 0000 --- --- --- --- 022833 00000 ------------ A 0.73 0.98 0.85 G 0.27 0.02 0.15 0000 --- --- --- --- 030655 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 030819 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031220 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031439 01468 NON-SYN G 0.81 0.74 0.78 A 0.19 0.26 0.22 0472 GAT AAT ASP(D) ASN(N) 031493 00000 ------------ A 0.90 0.73 0.82 G 0.10 0.27 0.18 0000 --- --- --- --- 031591 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031648 00000 ------------ A 0.79 0.41 0.61 G 0.21 0.59 0.39 0000 --- --- --- --- 031760 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 032018 01535 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0494 GCG GTG ALA(A) VAL(V) 032104 01621 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0523 CGG TGG ARG(R) TRP(W) 032279 00000 ------------ A 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- 032382 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 032488 00000 ------------ - 0.19 0.00 0.10 + 0.81 1.00 0.90 0000 --- --- --- --- 032556 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032662 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 032726 00000 ------------ T 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- 033431 00000 ------------ G 0.90 0.74 0.82 T 0.10 0.26 0.18 0000 --- --- --- --- 033436 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033649 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 033723 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 033775 00000 ------------ - 0.46 0.72 0.59 + 0.54 0.28 0.41 0000 --- --- --- --- 033920 00000 ------------ G 0.46 0.72 0.59 C 0.54 0.28 0.41 0000 --- --- --- --- 033921 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 033948 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 034010 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 034158 00000 ------------ C 0.69 0.93 0.81 T 0.31 0.07 0.19 0000 --- --- --- --- 036373 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036513 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 036636 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 037340 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037404 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 037700 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 037932 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 037937 00000 ------------ C 0.83 0.67 0.75 T 0.17 0.33 0.25 0000 --- --- --- --- 038059 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 038202 00000 ------------ T 0.44 0.72 0.60 A 0.56 0.28 0.40 0000 --- --- --- --- 038206 00000 ------------ A 0.72 1.00 0.88 C 0.28 0.00 0.12 0000 --- --- --- --- 038208 00000 ------------ - 0.47 0.72 0.61 + 0.53 0.28 0.39 0000 --- --- --- --- 038210 00000 ------------ T 0.45 0.72 0.59 C 0.55 0.28 0.41 0000 --- --- --- --- 038220 00000 ------------ A 0.47 0.72 0.61 G 0.53 0.28 0.39 0000 --- --- --- --- 038570 00000 ------------ T 0.65 0.98 0.81 G 0.35 0.02 0.19 0000 --- --- --- --- 038627 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 038823 01906 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0618 TTG CTG LEU(L) LEU(L) 038863 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 039287 00000 ------------ A 0.79 0.68 0.74 G 0.21 0.32 0.26 0000 --- --- --- --- 039388 02016 SYNON G 1.00 0.98 0.99 T 0.00 0.02 0.01 0654 GTG GTT VAL(V) VAL(V) 039709 00000 ------------ T 0.75 0.98 0.86 C 0.25 0.02 0.14 0000 --- --- --- --- 039744 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039745 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 039844 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039848 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 039964 00000 ------------ - 0.21 0.37 0.30 + 0.79 0.63 0.70 0000 --- --- --- --- 040287 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 040422 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040559 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 040699 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 040763 00000 ------------ C 0.83 0.74 0.78 A 0.17 0.26 0.22 0000 --- --- --- --- 041108 00000 ------------ G 0.96 0.89 0.93 C 0.04 0.11 0.07 0000 --- --- --- --- 041182 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 041274 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041415 00000 ------------ T 0.94 1.00 0.96 C 0.06 0.00 0.04 0000 --- --- --- --- 041494 00000 ------------ A 1.00 0.94 0.98 G 0.00 0.06 0.02 0000 --- --- --- --- 041610 02136 SYNON T 0.96 0.97 0.96 C 0.04 0.03 0.04 0694 GCT GCC ALA(A) ALA(A) 041682 00000 ------------ G 0.92 1.00 0.95 A 0.08 0.00 0.05 0000 --- --- --- --- 041867 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 041975 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 051937 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 052146 00000 ------------ G 0.57 0.48 0.52 C 0.43 0.52 0.48 0000 --- --- --- --- 052296 00000 ------------ C 0.84 1.00 0.92 G 0.16 0.00 0.08 0000 --- --- --- --- 052484 02313 SYNON T 0.85 1.00 0.93 C 0.15 0.00 0.07 0753 ACT ACC THR(T) THR(T) 052553 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 052814 00000 ------------ G 0.56 0.48 0.52 A 0.44 0.52 0.48 0000 --- --- --- --- 052888 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 052932 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 053150 02340 SYNON G 0.56 0.48 0.52 T 0.44 0.52 0.48 0762 GGG GGT GLY(G) GLY(G) 053342 02532 3' UTR G 0.57 0.47 0.52 A 0.43 0.53 0.48 0000 --- --- --- --- 053582 00000 ------------ - 0.54 0.44 0.50 + 0.46 0.56 0.50 0000 --- --- --- --- 053783 00000 ------------ T 0.54 0.52 0.53 C 0.46 0.48 0.47 0000 --- --- --- --- 053798 00000 ------------ G 0.56 0.48 0.52 A 0.44 0.52 0.48 0000 --- --- --- --- 053834 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 053862 00000 ------------ A 0.94 0.72 0.83 G 0.06 0.28 0.17 0000 --- --- --- --- 054072 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 054075 00000 ------------ C 0.54 0.52 0.53 G 0.46 0.48 0.47 0000 --- --- --- --- 054078 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 054137 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 054208 00000 ------------ C 0.88 0.76 0.82 T 0.12 0.24 0.18 0000 --- --- --- --- 054283 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 054925 00000 ------------ A 1.00 0.92 0.96 G 0.00 0.08 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000708: C 002620: T 006523: AG 014703: A 014875: TTTTATTGCCAA 018486: TA 022598: T 032488: A 032662: GTG 033775: AGAA 033921: A 036636: AC 038059: ATCAT 038208: A 039964: TC 041182: TCCATGCACTGA 041867: TCTC 053582: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000244 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 000276 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000788 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 001240 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 001278 00000 ------------ G 0.82 0.61 0.72 T 0.18 0.39 0.28 0000 --- --- --- --- 001455 00000 ------------ C 0.95 0.95 0.95 T 0.05 0.05 0.05 0000 --- --- --- --- 001977 00000 ------------ A 0.84 0.85 0.84 T 0.16 0.15 0.16 0000 --- --- --- --- 001979 00000 ------------ - 0.11 0.17 0.14 + 0.89 0.83 0.86 0000 --- --- --- --- 002520 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002550 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003107 00000 ------------ - 0.66 0.89 0.78 + 0.34 0.11 0.22 0000 --- --- --- --- 003231 00000 ------------ - 0.17 0.00 0.08 + 0.82 1.00 0.92 0000 --- --- --- --- 003383 00000 ------------ G 0.95 0.91 0.93 C 0.05 0.09 0.07 0000 --- --- --- --- 003511 00000 ------------ G 0.95 0.91 0.93 C 0.05 0.09 0.07 0000 --- --- --- --- 003897 00000 ------------ C 0.60 0.57 0.59 T 0.40 0.43 0.41 0000 --- --- --- --- 004148 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004317 00000 ------------ - 0.90 1.00 0.95 + 0.10 0.00 0.05 0000 --- --- --- --- 004341 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004584 00000 ------------ G 0.58 0.59 0.59 C 0.42 0.41 0.41 0000 --- --- --- --- 004758 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005592 00000 ------------ A 0.76 0.74 0.75 C 0.24 0.26 0.25 0000 --- --- --- --- 005636 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005649 00000 ------------ G 0.80 0.74 0.77 A 0.20 0.26 0.23 0000 --- --- --- --- 005807 00451 NON-SYN C 0.98 0.98 0.98 A 0.02 0.02 0.02 0124 TCC TAC SER(S) TYR(Y) 006029 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006060 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006069 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006228 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006239 00000 ------------ A 0.94 0.85 0.89 G 0.06 0.15 0.11 0000 --- --- --- --- 006379 00000 ------------ T 0.58 0.59 0.59 C 0.42 0.41 0.41 0000 --- --- --- --- 006721 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006872 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007144 00000 ------------ C 0.96 0.85 0.90 T 0.04 0.15 0.10 0000 --- --- --- --- 007301 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007822 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007829 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 007863 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 008293 00000 ------------ - 0.16 0.45 0.31 + 0.84 0.55 0.69 0000 --- --- --- --- 009214 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 009425 00000 ------------ C 0.64 0.85 0.74 T 0.36 0.15 0.26 0000 --- --- --- --- 009827 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010707 00000 ------------ G 0.97 0.93 0.95 T 0.03 0.07 0.05 0000 --- --- --- --- 010966 00000 ------------ A 0.56 0.59 0.57 T 0.44 0.41 0.42 0000 --- --- --- --- 010970 00000 ------------ T 0.79 0.57 0.66 A 0.21 0.43 0.34 0000 --- --- --- --- 011592 00000 ------------ G 0.75 0.83 0.79 C 0.25 0.17 0.21 0000 --- --- --- --- 011596 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011664 00000 ------------ G 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 011821 00000 ------------ T 0.71 0.33 0.53 C 0.29 0.67 0.47 0000 --- --- --- --- 011891 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012198 00000 ------------ C 0.79 0.37 0.59 T 0.21 0.63 0.41 0000 --- --- --- --- 012301 00000 ------------ G 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 012470 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012586 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 012659 00000 ------------ A 0.70 1.00 0.84 C 0.30 0.00 0.16 0000 --- --- --- --- 012792 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012937 01127 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0349 AGC AGT SER(S) SER(S) 013176 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013215 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013238 00000 ------------ A 0.61 0.71 0.66 C 0.39 0.29 0.34 0000 --- --- --- --- 013666 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 013667 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013679 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013717 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 015036 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 015053 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015086 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015157 00000 ------------ C 0.86 0.86 0.86 T 0.14 0.14 0.14 0000 --- --- --- --- 015207 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015283 00000 ------------ C 0.79 0.48 0.63 T 0.21 0.52 0.37 0000 --- --- --- --- 015808 01355 NON-SYN G 1.00 0.97 0.99 C 0.00 0.03 0.01 0425 ATG ATC MET(M) ILE(I) 016573 01639 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017293 00000 ------------ C 0.85 0.57 0.71 T 0.15 0.43 0.29 0000 --- --- --- --- 017489 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017953 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018004 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018177 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 018239 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018287 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001979: A 003107: G 003231: AGG 004317: G 006029: GCTCAGCTCTGTCACTTCCTGGCTGTGTGAACGTGGCCAAGTCACTGAAGCTTGGTGCCTCAATATCCTCATTTTATAAGATCCTATTTTATAAGATCGTTGTCAGGATTATTTGTGTTGGTATATGTAAAAAATATTTAGAACAAGGCTGGCTGTGGTGGCTCATGCCTGAAA 007829: AGTCC 007863: TTG 008293: ATGTTGGCCGGGATGGTCTCGATCTCCTGACCTCCTGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCCTGGCCATGAATTCCCTTTTTCTAAGCCATGACCTCTGTCTACTGTGGGGCAAAGGTATTTTCCCATCACACCTAACACACAGGCATGGGAAGCGAAGGAGGAGGTAGGAGAAACCAAGGGAAAGGAACCTCATGCCATCTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCCTGGCTCCCTGCAACCTCCACCTCCCAGGATCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCACCATGCCCAACTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000063 00000 ------------ A 0.86 0.29 0.57 G 0.14 0.71 0.43 0000 --- --- --- --- 000363 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000370 00000 ------------ C 0.35 0.76 0.55 G 0.65 0.24 0.45 0000 --- --- --- --- 000692 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000728 00000 ------------ A 0.69 0.83 0.76 G 0.31 0.17 0.24 0000 --- --- --- --- 000846 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000895 00000 ------------ G 0.82 0.32 0.57 C 0.18 0.68 0.43 0000 --- --- --- --- 000972 00000 ------------ G 0.50 0.78 0.64 A 0.50 0.22 0.36 0000 --- --- --- --- 001072 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001250 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001642 00000 ------------ G 0.67 0.82 0.74 A 0.33 0.18 0.26 0000 --- --- --- --- 001678 00000 ------------ G 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 001696 00000 ------------ C 0.85 0.41 0.63 T 0.15 0.59 0.37 0000 --- --- --- --- 002103 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002667 00000 ------------ A 0.90 0.96 0.93 C 0.10 0.04 0.07 0000 --- --- --- --- 002775 00000 ------------ A 0.90 0.96 0.93 C 0.10 0.04 0.07 0000 --- --- --- --- 002829 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002890 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002899 00000 ------------ T 0.33 0.76 0.54 G 0.67 0.24 0.46 0000 --- --- --- --- 002934 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003022 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 003150 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003303 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003498 00000 ------------ C 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 003625 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 003705 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004022 00000 ------------ A 0.91 0.96 0.93 G 0.09 0.04 0.07 0000 --- --- --- --- 004437 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 004494 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004754 00000 ------------ G 0.92 0.89 0.90 A 0.08 0.11 0.10 0000 --- --- --- --- 004826 00000 ------------ G 0.89 0.95 0.93 A 0.11 0.05 0.07 0000 --- --- --- --- 005067 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005072 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005085 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005119 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005407 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005414 00000 ------------ G 0.85 0.64 0.74 A 0.15 0.36 0.26 0000 --- --- --- --- 005536 00000 ------------ C 0.39 0.83 0.60 A 0.61 0.17 0.40 0000 --- --- --- --- 005663 00000 ------------ G 0.65 0.57 0.61 A 0.35 0.43 0.39 0000 --- --- --- --- 005790 00000 ------------ T 0.62 0.83 0.73 C 0.38 0.17 0.27 0000 --- --- --- --- 005845 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005928 00000 ------------ T 0.75 0.63 0.69 C 0.25 0.37 0.31 0000 --- --- --- --- 006054 00000 ------------ A 0.78 0.91 0.85 G 0.23 0.09 0.15 0000 --- --- --- --- 006123 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 006262 00000 ------------ T 0.65 0.72 0.69 C 0.35 0.28 0.31 0000 --- --- --- --- 006518 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 006684 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006750 00000 ------------ A 0.60 0.52 0.56 G 0.40 0.48 0.44 0000 --- --- --- --- 006807 00000 ------------ C 0.77 0.87 0.82 T 0.23 0.13 0.18 0000 --- --- --- --- 006842 00000 ------------ C 0.77 0.87 0.82 T 0.23 0.13 0.18 0000 --- --- --- --- 006957 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006965 00000 ------------ T 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 007247 00000 ------------ C 0.70 0.80 0.75 T 0.30 0.20 0.25 0000 --- --- --- --- 007409 00000 ------------ A 0.70 0.80 0.75 C 0.30 0.20 0.25 0000 --- --- --- --- 007477 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007563 00000 ------------ A 0.85 0.98 0.91 G 0.15 0.02 0.09 0000 --- --- --- --- 007582 00000 ------------ C 0.85 0.50 0.67 T 0.15 0.50 0.33 0000 --- --- --- --- 007622 00000 ------------ G 0.93 0.59 0.76 A 0.07 0.41 0.24 0000 --- --- --- --- 007666 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007716 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007792 00000 ------------ C 0.74 0.72 0.73 T 0.26 0.28 0.27 0000 --- --- --- --- 008343 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008574 00000 ------------ G 0.83 0.50 0.67 A 0.17 0.50 0.33 0000 --- --- --- --- 008685 00000 ------------ T 0.59 0.74 0.66 C 0.41 0.26 0.34 0000 --- --- --- --- 008990 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 009020 00000 ------------ C 0.86 0.52 0.69 A 0.14 0.48 0.31 0000 --- --- --- --- 009336 00000 ------------ C 0.46 0.70 0.57 A 0.54 0.30 0.43 0000 --- --- --- --- 009507 00213 NON-SYN T 0.83 0.50 0.67 A 0.17 0.50 0.33 0055 TTG ATG LEU(L) MET(M) 009704 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 009719 00000 ------------ C 0.81 0.50 0.66 T 0.19 0.50 0.34 0000 --- --- --- --- 009748 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009762 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009847 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 009932 00000 ------------ A 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 010138 00000 ------------ G 0.48 0.70 0.59 A 0.52 0.30 0.41 0000 --- --- --- --- 010217 00000 ------------ G 0.70 0.80 0.75 A 0.30 0.20 0.25 0000 --- --- --- --- 010376 00000 ------------ A 0.85 0.50 0.67 C 0.15 0.50 0.33 0000 --- --- --- --- 010525 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010668 00000 ------------ G 0.83 0.50 0.67 A 0.17 0.50 0.33 0000 --- --- --- --- 011331 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011407 00000 ------------ - 0.20 0.28 0.24 + 0.80 0.72 0.76 0000 --- --- --- --- 011707 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011962 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012194 00000 ------------ C 0.81 0.72 0.77 T 0.19 0.28 0.23 0000 --- --- --- --- 012468* 012471 00000 ------------ A 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 012826 00000 ------------ G 0.63 0.39 0.51 T 0.37 0.61 0.49 0000 --- --- --- --- 012849 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012977 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013087 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013112 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 013283 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013508 00000 ------------ C 0.84 0.98 0.91 T 0.16 0.02 0.09 0000 --- --- --- --- 013509 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 013676 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013771 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 013810 00000 ------------ G 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 013969 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014074 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 014181 00000 ------------ C 0.65 0.87 0.76 T 0.35 0.13 0.24 0000 --- --- --- --- 014381 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014558 00000 ------------ C 0.33 0.83 0.57 A 0.67 0.17 0.43 0000 --- --- --- --- 014932 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014998 00000 ------------ C 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 015009 00000 ------------ C 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 015116 00000 ------------ - 0.33 0.13 0.23 + 0.67 0.87 0.77 0000 --- --- --- --- 015315 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015338 00000 ------------ A 0.82 0.97 0.90 G 0.17 0.03 0.10 0000 --- --- --- --- 015356 00000 ------------ G 0.86 0.95 0.90 C 0.14 0.05 0.10 0000 --- --- --- --- 015361 00000 ------------ T 0.34 0.85 0.58 C 0.66 0.15 0.42 0000 --- --- --- --- 015468 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015474 00000 ------------ G 0.86 0.95 0.91 A 0.14 0.05 0.09 0000 --- --- --- --- 015477 00000 ------------ T 0.43 0.91 0.67 A 0.57 0.09 0.33 0000 --- --- --- --- 015527 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015766 00000 ------------ C 0.63 0.87 0.75 T 0.37 0.13 0.25 0000 --- --- --- --- 015799 00000 ------------ A 0.31 0.83 0.56 G 0.69 0.17 0.44 0000 --- --- --- --- 016001 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 016295 00000 ------------ G 0.90 0.98 0.94 T 0.10 0.02 0.06 0000 --- --- --- --- 016564 00000 ------------ G 0.54 0.85 0.69 T 0.46 0.15 0.31 0000 --- --- --- --- 016810 00000 ------------ A 0.83 0.91 0.87 G 0.17 0.09 0.13 0000 --- --- --- --- 017235 00000 ------------ G 0.89 0.98 0.93 A 0.11 0.02 0.07 0000 --- --- --- --- 017339 00000 ------------ T 0.32 0.82 0.57 C 0.68 0.18 0.43 0000 --- --- --- --- 017420 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 017703 00000 ------------ C 0.54 0.84 0.68 T 0.46 0.16 0.32 0000 --- --- --- --- 017899 00000 ------------ - 0.32 0.81 0.56 + 0.68 0.19 0.44 0000 --- --- --- --- 017952 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017974 00000 ------------ C 0.77 0.98 0.87 T 0.23 0.02 0.13 0000 --- --- --- --- 018152 00625 NON-SYN A 0.33 0.83 0.57 G 0.67 0.17 0.43 0192 CAA CGA GLN(Q) ARG(R) 018159 00632 TRUNCATION G 1.00 0.98 0.99 A 0.00 0.02 0.01 0194 TGG TGA TRP(W) *** 018906 00000 ------------ G 0.65 0.87 0.76 A 0.35 0.13 0.24 0000 --- --- --- --- 019029 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 019267 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 019273 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 019354 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 019364 00000 ------------ T 0.79 0.91 0.85 G 0.21 0.09 0.15 0000 --- --- --- --- 019470 00000 ------------ T 0.44 0.85 0.64 C 0.56 0.15 0.36 0000 --- --- --- --- 019534 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019559 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019694 00000 ------------ T 0.79 0.98 0.88 C 0.21 0.02 0.12 0000 --- --- --- --- 020399 00000 ------------ - 0.58 0.13 0.36 + 0.42 0.87 0.64 0000 --- --- --- --- 020776 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 021026 00000 ------------ C 0.79 0.91 0.85 T 0.21 0.09 0.15 0000 --- --- --- --- 021144 00000 ------------ C 0.85 0.98 0.91 T 0.15 0.02 0.09 0000 --- --- --- --- 021340 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021399 00000 ------------ T 0.31 0.83 0.56 C 0.69 0.17 0.44 0000 --- --- --- --- 021510 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 021766 00000 ------------ T 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- 021988 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 022029 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 022410 00000 ------------ A 0.83 0.98 0.90 G 0.17 0.02 0.10 0000 --- --- --- --- 022617 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022695 00000 ------------ A 0.65 0.96 0.80 G 0.35 0.04 0.20 0000 --- --- --- --- 022842 00000 ------------ A 0.97 0.97 0.97 G 0.03 0.03 0.03 0000 --- --- --- --- 022882 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022925 00000 ------------ A 0.88 0.98 0.92 C 0.12 0.02 0.08 0000 --- --- --- --- 022931 00000 ------------ - 0.42 0.10 0.27 + 0.58 0.90 0.73 0000 --- --- --- --- 023120 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 023887 00000 ------------ T 0.85 0.98 0.91 C 0.15 0.02 0.09 0000 --- --- --- --- 024673 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 025094 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 025209 00000 ------------ G 0.28 0.84 0.59 T 0.72 0.16 0.41 0000 --- --- --- --- 025492 00000 ------------ A 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 025515 00000 ------------ A 0.81 0.98 0.90 G 0.19 0.02 0.10 0000 --- --- --- --- 025588 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 026161 00000 ------------ A 0.82 0.98 0.90 G 0.18 0.02 0.10 0000 --- --- --- --- 026184 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 026257 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 026410 00000 ------------ T 0.79 0.98 0.89 C 0.21 0.02 0.11 0000 --- --- --- --- 026465 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 026600 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 026625 00000 ------------ C 0.64 0.89 0.77 T 0.36 0.11 0.23 0000 --- --- --- --- 026856 00000 ------------ C 0.38 0.87 0.62 T 0.62 0.13 0.38 0000 --- --- --- --- 027043 00000 ------------ - 0.18 0.02 0.10 + 0.82 0.98 0.90 0000 --- --- --- --- 027606 01378 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027678 01450 3' UTR A 0.35 0.87 0.61 G 0.65 0.13 0.39 0000 --- --- --- --- 027737 01509 3' UTR G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 027866 01638 3' UTR - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 027894 01666 3' UTR A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 027925 01697 3' UTR C 0.69 0.89 0.79 T 0.31 0.11 0.21 0000 --- --- --- --- 028107 01879 3' UTR C 0.71 0.98 0.84 T 0.29 0.02 0.16 0000 --- --- --- --- 028253 02025 3' UTR - 0.14 0.02 0.08 + 0.86 0.98 0.92 0000 --- --- --- --- 028259 02031 3' UTR A 0.86 0.98 0.92 T 0.14 0.02 0.08 0000 --- --- --- --- 028360 02132 3' UTR G 0.77 0.89 0.83 A 0.23 0.11 0.17 0000 --- --- --- --- 028387 02159 3' UTR - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 028482 02254 3' UTR - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 028509 02281 3' UTR G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 028631 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 028674 00000 ------------ G 0.97 0.88 0.92 A 0.03 0.12 0.08 0000 --- --- --- --- 028834 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 029021 00000 ------------ G 0.82 0.61 0.71 T 0.18 0.39 0.29 0000 --- --- --- --- 029142 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 029289 00000 ------------ T 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 011407: T 014074: CAAAA 015116: C 016001: CTAA 017899: TT 019354: T 020399: T 022029: CAG 022931: AGCA 024673: C 026257: AT 026465: AT 027043: TG 027866: T 028253: AATA 028387: ATTT 028482: T 029142: AGTT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 012468 A 0.92 0.91 0.91 C 0.06 0.09 0.07 G 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000680 00028 5' UTR G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 000920 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000922 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000924 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001000 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001246 00000 ------------ A 0.58 0.83 0.70 C 0.42 0.17 0.30 0000 --- --- --- --- 001448 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001554 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001678 00000 ------------ T 0.78 0.76 0.77 C 0.22 0.24 0.23 0000 --- --- --- --- 001741 00000 ------------ C 0.76 0.83 0.79 A 0.24 0.17 0.21 0000 --- --- --- --- 001750 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001948 00000 ------------ G 0.70 0.83 0.76 A 0.30 0.17 0.24 0000 --- --- --- --- 002025 00000 ------------ - 0.24 0.24 0.24 + 0.76 0.76 0.76 0000 --- --- --- --- 002048 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002155 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 002364 00000 ------------ - 0.98 0.95 0.97 + 0.02 0.05 0.03 0000 --- --- --- --- 002453 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003035 00000 ------------ T 0.92 0.72 0.82 C 0.08 0.28 0.18 0000 --- --- --- --- 003628 00000 ------------ C 0.71 0.83 0.77 T 0.29 0.17 0.23 0000 --- --- --- --- 004205 00000 ------------ - 1.00 0.96 0.98 + 0.00 0.04 0.02 0000 --- --- --- --- 004246 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004528 00000 ------------ - 0.13 0.00 0.07 + 0.87 1.00 0.93 0000 --- --- --- --- 004644 00000 ------------ T 0.62 0.80 0.72 C 0.38 0.20 0.28 0000 --- --- --- --- 004715 00000 ------------ G 0.76 0.68 0.72 A 0.24 0.32 0.28 0000 --- --- --- --- 004938 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006172 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006207 00000 ------------ C 1.00 0.80 0.90 T 0.00 0.20 0.10 0000 --- --- --- --- 006323 00000 ------------ A 0.74 0.70 0.72 G 0.26 0.30 0.28 0000 --- --- --- --- 006955 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006998 00000 ------------ T 0.76 0.72 0.74 A 0.24 0.28 0.26 0000 --- --- --- --- 007238 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 007382 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 007447 00000 ------------ C 0.80 0.80 0.80 T 0.20 0.20 0.20 0000 --- --- --- --- 008018 00000 ------------ A 0.85 0.70 0.77 G 0.15 0.30 0.23 0000 --- --- --- --- 008054 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 008831 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 009358 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009359 00000 ------------ A 0.65 0.79 0.72 G 0.35 0.21 0.28 0000 --- --- --- --- 009513 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 009569 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 009572 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 009720 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 009762 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 009829 00000 ------------ T 0.64 0.61 0.62 A 0.36 0.39 0.38 0000 --- --- --- --- 009984 00000 ------------ C 0.90 0.67 0.79 T 0.10 0.33 0.21 0000 --- --- --- --- 010132 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 010481 00000 ------------ A 0.79 0.83 0.81 G 0.21 0.17 0.19 0000 --- --- --- --- 010514 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010621 00000 ------------ A 0.73 0.61 0.67 G 0.27 0.39 0.33 0000 --- --- --- --- 010704 00000 ------------ T 0.71 0.93 0.82 A 0.29 0.07 0.18 0000 --- --- --- --- 010954 00000 ------------ A 0.73 0.61 0.67 C 0.27 0.39 0.33 0000 --- --- --- --- 011546 00000 ------------ T 0.78 0.83 0.80 C 0.22 0.17 0.20 0000 --- --- --- --- 011557 00000 ------------ T 0.78 0.83 0.80 A 0.22 0.17 0.20 0000 --- --- --- --- 011585 00000 ------------ C 0.91 0.61 0.76 A 0.09 0.39 0.24 0000 --- --- --- --- 011648 00000 ------------ G 0.78 0.83 0.80 T 0.22 0.17 0.20 0000 --- --- --- --- 011745 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 011750 00000 ------------ C 0.94 0.67 0.81 G 0.06 0.33 0.19 0000 --- --- --- --- 012267 00000 ------------ A 0.96 0.70 0.83 G 0.04 0.30 0.17 0000 --- --- --- --- 012374 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012427 00000 ------------ G 0.58 0.50 0.54 A 0.42 0.50 0.46 0000 --- --- --- --- 012670 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 012963 00000 ------------ T 0.75 0.80 0.78 G 0.25 0.20 0.22 0000 --- --- --- --- 013069 00000 ------------ C 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 013309 00000 ------------ C 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 013311 00000 ------------ C 1.00 0.80 0.90 G 0.00 0.20 0.10 0000 --- --- --- --- 013526 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013693 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013909 00000 ------------ C 0.79 0.86 0.82 A 0.21 0.14 0.18 0000 --- --- --- --- 014015 00000 ------------ T 0.52 0.54 0.53 A 0.48 0.46 0.47 0000 --- --- --- --- 014312 00000 ------------ A 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 014587 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015096 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015143 00000 ------------ A 0.54 0.50 0.52 G 0.46 0.50 0.48 0000 --- --- --- --- 015513 00000 ------------ - 0.06 0.30 0.17 + 0.94 0.70 0.83 0000 --- --- --- --- 015888 00000 ------------ T 0.75 0.80 0.78 C 0.25 0.20 0.22 0000 --- --- --- --- 016091 00000 ------------ G 0.80 0.85 0.82 C 0.20 0.15 0.18 0000 --- --- --- --- 016431 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016531 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017015 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017131 00000 ------------ G 0.80 0.61 0.71 A 0.20 0.39 0.29 0000 --- --- --- --- 017484 00000 ------------ G 0.97 0.88 0.93 T 0.03 0.12 0.07 0000 --- --- --- --- 017599 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 017661 00000 ------------ A 0.82 0.81 0.81 T 0.18 0.19 0.19 0000 --- --- --- --- 017811 00000 ------------ - 0.57 0.50 0.53 + 0.43 0.50 0.47 0000 --- --- --- --- 017976 00000 ------------ G 1.00 0.92 0.97 A 0.00 0.08 0.03 0000 --- --- --- --- 018031 00000 ------------ - 0.07 0.32 0.19 + 0.93 0.68 0.81 0000 --- --- --- --- 018058 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018264 00000 ------------ G 0.75 0.80 0.78 A 0.25 0.20 0.22 0000 --- --- --- --- 018563 00000 ------------ - 0.02 0.19 0.11 + 0.98 0.81 0.89 0000 --- --- --- --- 019665 00000 ------------ G 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 019714 00000 ------------ G 0.77 0.80 0.79 C 0.23 0.20 0.21 0000 --- --- --- --- 019838 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 019905 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 019926 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 020033 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020158 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020203 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020541 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 020789 00000 ------------ G 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 020843 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 021122 00000 ------------ A 0.94 0.70 0.82 C 0.06 0.30 0.18 0000 --- --- --- --- 021168 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 021176 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 021449 00000 ------------ G 0.78 0.83 0.80 A 0.22 0.17 0.20 0000 --- --- --- --- 021820 00000 ------------ A 0.96 0.67 0.82 G 0.04 0.33 0.18 0000 --- --- --- --- 022443 00000 ------------ C 0.76 0.80 0.78 T 0.24 0.20 0.22 0000 --- --- --- --- 022505 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022692 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022839 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023430 00000 ------------ C 0.75 0.82 0.78 A 0.25 0.18 0.22 0000 --- --- --- --- 023701 00000 ------------ G 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 023837 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 023956 00475 NON-SYN C 0.76 0.80 0.78 G 0.24 0.20 0.22 0148 GCA GGA ALA(A) GLY(G) 024095 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 024239 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 024499 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024561 00000 ------------ G 0.78 0.80 0.79 A 0.22 0.20 0.21 0000 --- --- --- --- 024992 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 025024 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025147 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 025424 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 025439 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025487 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 025527 00000 ------------ G 0.77 0.82 0.80 A 0.23 0.18 0.20 0000 --- --- --- --- 025578 00546 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0172 GTT CTT VAL(V) LEU(L) 026331 00000 ------------ T 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 026420 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026523 00000 ------------ T 0.94 0.70 0.82 C 0.06 0.30 0.18 0000 --- --- --- --- 026778 00000 ------------ - 0.24 0.20 0.22 + 0.76 0.80 0.78 0000 --- --- --- --- 027254 00000 ------------ A 0.76 0.80 0.78 C 0.24 0.20 0.22 0000 --- --- --- --- 027311 00000 ------------ A 0.76 0.80 0.78 G 0.24 0.20 0.22 0000 --- --- --- --- 027897 00000 ------------ - 0.77 0.80 0.79 + 0.23 0.20 0.21 0000 --- --- --- --- 027982 00000 ------------ A 0.52 0.54 0.53 G 0.48 0.46 0.47 0000 --- --- --- --- 028077 00000 ------------ C 0.52 0.54 0.53 T 0.48 0.46 0.47 0000 --- --- --- --- 028098 00000 ------------ A 0.57 0.48 0.52 T 0.43 0.52 0.48 0000 --- --- --- --- 028218 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 028739 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 028841 00000 ------------ T 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 028997 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029024 00000 ------------ A 0.73 0.93 0.83 C 0.27 0.07 0.17 0000 --- --- --- --- 029208 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 029392 00000 ------------ T 0.75 0.80 0.78 A 0.25 0.20 0.22 0000 --- --- --- --- 029405 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029807 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 029912 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030153 00000 ------------ T 0.95 0.67 0.81 A 0.05 0.33 0.19 0000 --- --- --- --- 030173 EXON9 -1 SPLICE G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030199 00964 NON-SYN C 0.76 0.83 0.80 G 0.24 0.17 0.20 0311 TCT TGT SER(S) CYS(C) 030718 01483 3' UTR - 0.73 0.83 0.78 + 0.27 0.17 0.22 0000 --- --- --- --- 030931 00000 ------------ G 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 030941 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 031136 00000 ------------ G 0.77 0.82 0.79 A 0.23 0.18 0.21 0000 --- --- --- --- 031174 00000 ------------ T 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 031549 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 031561 00000 ------------ G 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 031719 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031873 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 032009 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 032098 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032237 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032528 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 032536 00000 ------------ - 0.62 0.74 0.68 + 0.38 0.26 0.32 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000920: C 002025: G 002364: TAAATAAA 004205: A 004246: GGAAAGGCTCTTCAGAGGAAGTT 004528: A 007238: CC 009762: T 015513: TG 017811: GTAAGCATTGT 018031: CTTAA 018563: G 026778: AACA 027897: GT 030718: ATA 032536: TAT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000212 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000239 00000 ------------ C 0.80 0.86 0.83 T 0.20 0.14 0.17 0000 --- --- --- --- 000380 00000 ------------ T 0.80 0.84 0.82 G 0.20 0.16 0.18 0000 --- --- --- --- 000581 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000677 00000 ------------ C 0.88 0.70 0.79 T 0.12 0.30 0.21 0000 --- --- --- --- 000684 00000 ------------ T 0.77 0.80 0.79 A 0.23 0.20 0.21 0000 --- --- --- --- 000700 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000705 00000 ------------ - 0.46 0.46 0.46 + 0.54 0.54 0.54 0000 --- --- --- --- 000719 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000978 00000 ------------ C 0.93 0.73 0.83 T 0.07 0.27 0.17 0000 --- --- --- --- 001060 00000 ------------ T 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 001496 00000 ------------ A 0.75 0.80 0.78 G 0.25 0.20 0.22 0000 --- --- --- --- 001510 00000 ------------ T 0.77 0.80 0.79 G 0.23 0.20 0.21 0000 --- --- --- --- 001645 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001821 00000 ------------ T 0.73 0.79 0.76 C 0.27 0.21 0.24 0000 --- --- --- --- 002115 00000 ------------ A 1.00 0.80 0.90 T 0.00 0.20 0.10 0000 --- --- --- --- 002375 00000 ------------ G 0.67 0.80 0.74 A 0.33 0.20 0.26 0000 --- --- --- --- 002605 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002812 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002981 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 003000 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003169 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004074 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004380 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 005686 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 005734 00000 ------------ C 0.73 0.80 0.76 T 0.27 0.20 0.24 0000 --- --- --- --- 005815 00000 ------------ T 0.73 0.80 0.76 C 0.27 0.20 0.24 0000 --- --- --- --- 005913 00000 ------------ G 0.73 0.78 0.76 A 0.27 0.22 0.24 0000 --- --- --- --- 006449 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 006542 00063 SYNON C 0.71 0.78 0.74 T 0.29 0.22 0.26 0021 TTC TTT PHE(F) PHE(F) 006585 00000 ------------ - 0.08 0.02 0.05 + 0.92 0.98 0.95 0000 --- --- --- --- 007239 00000 ------------ A 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 007668 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007802 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007952 00000 ------------ - 0.17 0.00 0.09 + 0.83 1.00 0.91 0000 --- --- --- --- 008068 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 008096 00000 ------------ C 0.48 0.52 0.50 T 0.52 0.48 0.50 0000 --- --- --- --- 008338 00000 ------------ C 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 008499 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 008514 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008743 00000 ------------ A 0.90 0.98 0.94 C 0.10 0.02 0.06 0000 --- --- --- --- 008778 00000 ------------ G 0.57 0.57 0.57 T 0.43 0.43 0.43 0000 --- --- --- --- 009251 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009469 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009719 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009827 00000 ------------ G 0.93 0.70 0.82 A 0.07 0.30 0.18 0000 --- --- --- --- 010245 00000 ------------ A 0.73 0.52 0.63 G 0.27 0.48 0.37 0000 --- --- --- --- 010256 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010319 00000 ------------ G 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 010340 00000 ------------ A 0.82 0.83 0.83 C 0.18 0.17 0.17 0000 --- --- --- --- 010362 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011006 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011527 00000 ------------ T 0.90 0.98 0.94 C 0.10 0.02 0.06 0000 --- --- --- --- 011534 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 011541 00000 ------------ C 0.80 0.80 0.80 G 0.20 0.20 0.20 0000 --- --- --- --- 011838 00000 ------------ T 0.89 0.64 0.77 C 0.11 0.36 0.23 0000 --- --- --- --- 011879 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011967 00000 ------------ - 0.09 0.02 0.06 + 0.91 0.98 0.94 0000 --- --- --- --- 012082 00000 ------------ T 0.95 0.67 0.80 A 0.05 0.33 0.20 0000 --- --- --- --- 012525 00000 ------------ A 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 012788 00000 ------------ T 0.52 0.57 0.54 C 0.48 0.43 0.46 0000 --- --- --- --- 013102 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013122 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 013194 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013350 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015868 00000 ------------ G 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 016307 00000 ------------ A 0.74 0.48 0.61 G 0.26 0.52 0.39 0000 --- --- --- --- 016557 00000 ------------ C 0.72 0.50 0.61 T 0.28 0.50 0.39 0000 --- --- --- --- 017364 00000 ------------ G 0.92 0.97 0.94 T 0.08 0.03 0.06 0000 --- --- --- --- 017780 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017810 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 017828 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024836 00000 ------------ T 1.00 0.82 0.91 G 0.00 0.18 0.09 0000 --- --- --- --- 025873 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025935 00000 ------------ A 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 026022 00000 ------------ G 0.91 0.98 0.95 A 0.09 0.02 0.05 0000 --- --- --- --- 026060 00000 ------------ T 0.83 1.00 0.91 G 0.17 0.00 0.09 0000 --- --- --- --- 026609 00000 ------------ G 0.91 0.97 0.94 T 0.09 0.03 0.06 0000 --- --- --- --- 026991 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 027163 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027593 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027820 00000 ------------ G 0.92 0.98 0.94 A 0.08 0.02 0.06 0000 --- --- --- --- 027976 00000 ------------ C 0.58 0.57 0.57 T 0.42 0.43 0.43 0000 --- --- --- --- 028277 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028393 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028975 00000 ------------ A 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 029066 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 029128 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 029147 00000 ------------ G 0.78 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 029587 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030029 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 030056 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030588 00297 SYNON A 0.58 0.57 0.57 G 0.42 0.43 0.43 0099 GCA GCG ALA(A) ALA(A) 030785 00000 ------------ A 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 031011 00000 ------------ G 0.71 0.98 0.84 A 0.29 0.02 0.16 0000 --- --- --- --- 031083 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 031084 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031281 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 031553 00000 ------------ C 1.00 0.87 0.94 T 0.00 0.13 0.06 0000 --- --- --- --- 031780 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 031942 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031966 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032039 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 032529 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032555 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 032706 00000 ------------ C 0.78 0.76 0.78 T 0.22 0.24 0.23 0000 --- --- --- --- 032923 00000 ------------ A 0.91 0.98 0.94 C 0.09 0.02 0.06 0000 --- --- --- --- 033034 00000 ------------ G 0.91 0.98 0.94 A 0.09 0.02 0.06 0000 --- --- --- --- 033075 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 033107 00000 ------------ C 0.59 0.50 0.54 A 0.41 0.50 0.46 0000 --- --- --- --- 033900 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 034191 00000 ------------ T 0.94 0.97 0.95 C 0.06 0.03 0.05 0000 --- --- --- --- 034719 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 034784 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 034803 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 035231 00000 ------------ C 0.58 0.52 0.55 A 0.42 0.48 0.45 0000 --- --- --- --- 035354 00378 SYNON G 0.85 1.00 0.93 A 0.15 0.00 0.07 0126 GTG GTA VAL(V) VAL(V) 035412 00436 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0146 GAG AAG GLU(E) LYS(K) 035533 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 035917 00000 ------------ C 0.58 0.61 0.59 T 0.42 0.39 0.41 0000 --- --- --- --- 035981 00000 ------------ A 0.92 0.98 0.94 T 0.08 0.02 0.06 0000 --- --- --- --- 036561 00000 ------------ T 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 036625 00000 ------------ A 0.79 0.80 0.80 G 0.21 0.20 0.20 0000 --- --- --- --- 036763 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 036799 00000 ------------ T 0.71 0.98 0.84 C 0.29 0.02 0.16 0000 --- --- --- --- 037120 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 037122 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037246 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037261 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 037392 00000 ------------ G 0.91 0.98 0.94 A 0.09 0.02 0.06 0000 --- --- --- --- 037590 00000 ------------ A 0.69 0.50 0.59 G 0.31 0.50 0.41 0000 --- --- --- --- 038346 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038810 00536 NON-SYN C 0.94 1.00 0.97 A 0.06 0.00 0.03 0179 GCC GAC ALA(A) ASP(D) 038883 00609 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0203 TAT TAC TYR(Y) TYR(Y) 038981 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039236 00000 ------------ C 0.71 0.50 0.61 T 0.29 0.50 0.39 0000 --- --- --- --- 039500* 039548 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 039676 00000 ------------ T 0.94 0.70 0.82 C 0.06 0.30 0.18 0000 --- --- --- --- 039752 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039900 00000 ------------ A 0.73 0.50 0.62 G 0.27 0.50 0.38 0000 --- --- --- --- 040512 00000 ------------ A 0.92 0.70 0.81 G 0.08 0.30 0.19 0000 --- --- --- --- 040704 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040907 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 041102 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041380 00000 ------------ C 0.71 0.96 0.83 G 0.29 0.04 0.17 0000 --- --- --- --- 041732 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 041740 00000 ------------ A 0.91 0.98 0.95 G 0.09 0.02 0.05 0000 --- --- --- --- 041808 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 042020 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042039 00000 ------------ A 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 042350 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042400 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 042471 00000 ------------ G 0.93 0.70 0.82 A 0.07 0.30 0.18 0000 --- --- --- --- 042538 00000 ------------ - 0.92 0.98 0.95 + 0.08 0.02 0.05 0000 --- --- --- --- 042896 00000 ------------ C 0.90 0.97 0.94 T 0.10 0.03 0.06 0000 --- --- --- --- 043172 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 043610 00000 ------------ C 0.93 0.97 0.95 A 0.07 0.03 0.05 0000 --- --- --- --- 043756 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 043961 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044027 00000 ------------ C 0.82 1.00 0.91 G 0.18 0.00 0.09 0000 --- --- --- --- 044250 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 044275 00000 ------------ A 0.91 0.98 0.94 C 0.09 0.02 0.06 0000 --- --- --- --- 044419 00000 ------------ G 0.82 0.82 0.82 T 0.18 0.18 0.18 0000 --- --- --- --- 044733 00000 ------------ T 0.91 0.98 0.94 C 0.09 0.02 0.06 0000 --- --- --- --- 045023 00000 ------------ G 0.92 0.98 0.94 C 0.08 0.02 0.06 0000 --- --- --- --- 045169 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 045186 00000 ------------ G 0.94 0.69 0.82 A 0.06 0.31 0.18 0000 --- --- --- --- 045276 00000 ------------ T 0.92 0.98 0.94 A 0.08 0.02 0.06 0000 --- --- --- --- 045358 00000 ------------ G 0.92 0.98 0.94 C 0.08 0.02 0.06 0000 --- --- --- --- 045486 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 045966 00000 ------------ A 0.58 0.57 0.57 G 0.42 0.43 0.43 0000 --- --- --- --- 046141 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 046279 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 046834 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 046845 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 046879 00000 ------------ G 0.71 0.98 0.84 T 0.29 0.02 0.16 0000 --- --- --- --- 046921 00000 ------------ G 0.79 0.80 0.79 A 0.21 0.20 0.21 0000 --- --- --- --- 046936 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 047145 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 047216 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 047397 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 047579 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 047599 00000 ------------ C 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 047638 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 047845 00000 ------------ A 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 048174 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 049368 00000 ------------ - 0.09 0.02 0.05 + 0.91 0.98 0.95 0000 --- --- --- --- 049569 00000 ------------ T 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 049725 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 049735 00000 ------------ A 0.94 0.70 0.82 T 0.06 0.30 0.18 0000 --- --- --- --- 050281 00000 ------------ - 0.21 0.18 0.20 + 0.79 0.82 0.80 0000 --- --- --- --- 050382 00000 ------------ A 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 050400 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 050839 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 050942 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 050943 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 050962 00000 ------------ G 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 051333 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 051391 00000 ------------ G 0.71 0.98 0.84 A 0.29 0.02 0.16 0000 --- --- --- --- 051498 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 051517 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 052091 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 052187 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 052290 00000 ------------ T 0.92 0.97 0.94 C 0.08 0.03 0.06 0000 --- --- --- --- 052338 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 052623 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 052808 00000 ------------ A 0.91 0.98 0.94 G 0.09 0.02 0.06 0000 --- --- --- --- 052870 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 053071 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 053093 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 053226 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 053379 00000 ------------ A 0.78 1.00 0.88 G 0.22 0.00 0.12 0000 --- --- --- --- 053556 00000 ------------ G 0.58 0.55 0.57 A 0.42 0.45 0.43 0000 --- --- --- --- 053954 00000 ------------ T 0.91 0.98 0.94 C 0.09 0.02 0.06 0000 --- --- --- --- 054048 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 054327 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 054397 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 054470 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 054513 00000 ------------ C 0.71 0.98 0.84 T 0.29 0.02 0.16 0000 --- --- --- --- 054699 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 054786 00000 ------------ T 0.74 0.50 0.62 G 0.26 0.50 0.38 0000 --- --- --- --- 054787 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 055069 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 055146 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 055183 00000 ------------ G 0.59 0.57 0.58 A 0.41 0.43 0.42 0000 --- --- --- --- 055363 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 055645 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 055876 00000 ------------ - 0.09 0.02 0.06 + 0.91 0.98 0.94 0000 --- --- --- --- 056279 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 056905 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 057100 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 057266 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 057456 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 057807 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 057965 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 058083 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 058274 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 058833 00000 ------------ A 0.94 0.98 0.96 G 0.06 0.02 0.04 0000 --- --- --- --- 059727 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 059789 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 060671 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 060718 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 060784 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 060794 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 060860 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 061224 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 061568 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 061741 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 062113 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 062550 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 063016 00000 ------------ A 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 063042 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 063049 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 063681 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 063809 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 063981 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 064415 00000 ------------ A 0.93 0.98 0.95 G 0.07 0.02 0.05 0000 --- --- --- --- 064447 00000 ------------ T 0.93 0.98 0.95 C 0.07 0.02 0.05 0000 --- --- --- --- 065983 00000 ------------ A 0.79 0.82 0.80 G 0.21 0.18 0.20 0000 --- --- --- --- 066260 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 066319 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 066357 00000 ------------ T 0.93 0.98 0.95 C 0.07 0.02 0.05 0000 --- --- --- --- 068375 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 068880 00000 ------------ G 0.71 0.98 0.84 C 0.29 0.02 0.16 0000 --- --- --- --- 069393 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 069856 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 070769 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 070882 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 071325 00000 ------------ T 0.80 0.82 0.81 C 0.20 0.18 0.19 0000 --- --- --- --- 071606 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 071665 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 071863 00000 ------------ C 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 072705 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 073166 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 073285 00000 ------------ G 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 073352 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 073522 00000 ------------ G 0.69 0.93 0.81 T 0.31 0.07 0.19 0000 --- --- --- --- 073625 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 073627 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 073683 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 073838 00000 ------------ C 0.48 0.78 0.63 T 0.52 0.22 0.37 0000 --- --- --- --- 073955 00000 ------------ G 0.91 0.98 0.95 A 0.09 0.02 0.05 0000 --- --- --- --- 074142 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 074609 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 075161 00000 ------------ - 0.24 0.20 0.22 + 0.76 0.80 0.78 0000 --- --- --- --- 076330 00000 ------------ G 0.56 0.93 0.74 A 0.44 0.07 0.26 0000 --- --- --- --- 076451 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000705: T 006585: TC 007952: C 008499: CT 008514: T 011534: T 011967: G 025873: C 031083: A 042538: AT 049368: AAAAGT 049725: GCTG 050281: A 052623: AGTGTCCTGCTAGTAAAGGGGT 055876: A 061568: CATCT 069856: T 073352: GCAAA 075161: GAT The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 039500 A 0.00 0.02 0.01 C 0.17 0.00 0.09 T 0.83 0.98 0.90 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000615 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001563 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001837 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001954 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001955 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002027 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 002100 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 002591 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002628 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003343 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 003552 00000 ------------ G 0.60 0.78 0.69 C 0.40 0.22 0.31 0000 --- --- --- --- 004196 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004366 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004416 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004438 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004508 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004644 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 005255 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008330 00000 ------------ - 0.30 0.72 0.51 + 0.70 0.28 0.49 0000 --- --- --- --- 008532 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008533 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008557 00000 ------------ C 0.61 0.72 0.66 T 0.39 0.28 0.34 0000 --- --- --- --- 008906 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009007 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009222 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009247 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009273 00000 ------------ T 0.65 0.80 0.72 C 0.35 0.20 0.28 0000 --- --- --- --- 009371 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016047 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016195 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 016369 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016574 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 016631 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 016656 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 017081 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 017082 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017349 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017372 00000 ------------ T 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 017420 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 017464 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 017467 00000 ------------ A 0.54 0.91 0.73 G 0.46 0.09 0.27 0000 --- --- --- --- 017864 00000 ------------ G 0.78 0.37 0.58 C 0.22 0.63 0.42 0000 --- --- --- --- 017922 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 017927 00000 ------------ C 0.93 0.93 0.93 T 0.07 0.07 0.07 0000 --- --- --- --- 022077 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 022140 00000 ------------ T 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 022382 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022409 00000 ------------ G 0.98 0.86 0.92 A 0.02 0.14 0.08 0000 --- --- --- --- 022732 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 022987 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 025220 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 025263 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 025273 00000 ------------ C 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 025437 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025460 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 026023 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 026162 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 026174 00000 ------------ T 0.81 0.98 0.89 C 0.19 0.02 0.11 0000 --- --- --- --- 026182 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 026188 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 026193 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 026203 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026213 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026224 00000 ------------ C 0.50 1.00 0.74 A 0.50 0.00 0.26 0000 --- --- --- --- 026233 00000 ------------ A 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 026245 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026319 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026389 00000 ------------ - 0.94 0.93 0.93 + 0.06 0.07 0.07 0000 --- --- --- --- 026600 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 026935 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026967 00000 ------------ G 0.83 0.93 0.88 C 0.17 0.07 0.12 0000 --- --- --- --- 026968 00000 ------------ C 0.83 0.93 0.88 T 0.17 0.07 0.12 0000 --- --- --- --- 026987 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 027294 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 027299 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032817 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 032832 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 032885 00000 ------------ T 0.83 0.86 0.85 C 0.17 0.14 0.15 0000 --- --- --- --- 032982 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033326 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 033432 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 033713 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033715 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 033827 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 034075 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034108 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 034208 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 034354 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 034376 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 034443 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 034670 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 034790 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 034970 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 034992 00000 ------------ A 0.93 0.98 0.95 G 0.07 0.02 0.05 0000 --- --- --- --- 035002 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 038731 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 038743 00000 ------------ T 0.69 0.82 0.75 C 0.31 0.18 0.25 0000 --- --- --- --- 039230 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 039297 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 039357 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 039413 00000 ------------ G 0.73 0.93 0.83 A 0.27 0.07 0.17 0000 --- --- --- --- 039589 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039723 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 040009 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 047237 00000 ------------ T 0.62 0.81 0.71 C 0.38 0.19 0.29 0000 --- --- --- --- 047238 00000 ------------ G 0.96 0.88 0.92 A 0.04 0.12 0.08 0000 --- --- --- --- 047474 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 047582 00201 5' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 047875 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 047951 00000 ------------ G 0.56 0.83 0.69 A 0.44 0.17 0.31 0000 --- --- --- --- 048063 00000 ------------ G 0.35 0.91 0.63 T 0.65 0.09 0.37 0000 --- --- --- --- 048128 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 048346 00000 ------------ G 0.90 0.83 0.86 A 0.10 0.17 0.14 0000 --- --- --- --- 048348 00000 ------------ A 0.65 0.83 0.73 G 0.35 0.17 0.27 0000 --- --- --- --- 055224 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 055335 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 055345 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 055599 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 055614 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 055716 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 055960 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 061435 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 061550 00000 ------------ T 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 062033 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 062065 00000 ------------ G 0.58 0.83 0.70 A 0.42 0.17 0.30 0000 --- --- --- --- 062203 00000 ------------ T 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 062233 00000 ------------ T 0.52 0.83 0.67 A 0.48 0.17 0.33 0000 --- --- --- --- 062887 00000 ------------ C 0.77 0.82 0.80 T 0.23 0.18 0.20 0000 --- --- --- --- 063277 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 063382 00000 ------------ G 0.85 0.82 0.84 A 0.15 0.18 0.16 0000 --- --- --- --- 063548 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 063724 00000 ------------ A 0.52 0.82 0.66 G 0.48 0.18 0.34 0000 --- --- --- --- 064082 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 064130 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 064144 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 064314 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 064341 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 064576 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 064750 00000 ------------ T 0.61 0.80 0.70 G 0.39 0.20 0.30 0000 --- --- --- --- 065044 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 065066 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065195 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 065266 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065317 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 065352 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 065623 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 066220 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 066459 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 066470 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 066553 00000 ------------ T 0.54 0.83 0.68 A 0.46 0.17 0.32 0000 --- --- --- --- 066582 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 067105 00000 ------------ G 0.88 0.83 0.85 A 0.12 0.17 0.15 0000 --- --- --- --- 067159 00000 ------------ T 0.62 0.83 0.72 C 0.38 0.17 0.28 0000 --- --- --- --- 067287 00000 ------------ A 0.65 0.83 0.74 G 0.35 0.17 0.26 0000 --- --- --- --- 067445 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 067581 00694 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0162 CTT GTT LEU(L) VAL(V) 067700 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 068451 00000 ------------ G 0.78 0.83 0.80 A 0.22 0.17 0.20 0000 --- --- --- --- 068683 00000 ------------ G 0.96 0.87 0.91 A 0.04 0.13 0.09 0000 --- --- --- --- 068932 00000 ------------ G 0.81 0.98 0.89 A 0.19 0.02 0.11 0000 --- --- --- --- 068949 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 069365 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 069424 00000 ------------ A 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 069853 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 070039 00000 ------------ T 0.19 0.78 0.50 C 0.81 0.22 0.50 0000 --- --- --- --- 075049 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 075438 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 075694 00000 ------------ T 0.33 0.80 0.56 G 0.67 0.20 0.44 0000 --- --- --- --- 075724 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 075876 00000 ------------ A 0.80 0.83 0.82 G 0.20 0.17 0.18 0000 --- --- --- --- 075910 00000 ------------ T 0.90 0.98 0.94 C 0.10 0.02 0.06 0000 --- --- --- --- 076098 00000 ------------ A 0.67 1.00 0.84 C 0.33 0.00 0.16 0000 --- --- --- --- 076198 00000 ------------ C 0.48 0.80 0.65 T 0.52 0.20 0.35 0000 --- --- --- --- 077215 00000 ------------ C 0.64 0.84 0.74 T 0.36 0.16 0.26 0000 --- --- --- --- 077423 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 077608 00000 ------------ - 0.42 0.16 0.29 + 0.57 0.84 0.71 0000 --- --- --- --- 080486 00000 ------------ C 0.71 1.00 0.83 T 0.29 0.00 0.17 0000 --- --- --- --- 080492 00000 ------------ G 0.38 0.80 0.59 C 0.62 0.20 0.41 0000 --- --- --- --- 080550 00000 ------------ C 0.98 0.83 0.90 A 0.02 0.17 0.10 0000 --- --- --- --- 080913 00000 ------------ C 0.96 0.83 0.89 T 0.04 0.17 0.11 0000 --- --- --- --- 081190 01113 SYNON C 0.97 1.00 0.99 T 0.03 0.00 0.01 0301 GAC GAT ASP(D) ASP(D) 081594 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 082270 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 082291 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 082302 00000 ------------ T 0.72 1.00 0.85 C 0.28 0.00 0.15 0000 --- --- --- --- 082789 00000 ------------ A 0.54 0.82 0.68 G 0.46 0.18 0.32 0000 --- --- --- --- 083932 00000 ------------ G 0.71 1.00 0.85 A 0.29 0.00 0.15 0000 --- --- --- --- 083944 00000 ------------ G 0.38 0.80 0.59 C 0.62 0.20 0.41 0000 --- --- --- --- 084103 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 084761 01791 3' UTR C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 084970 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 084997 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004366: CTGT 008330: TTT 016631: A 022732: A 026389: AAAAT 067445: CC 077608: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000054 00000 ------------ T 0.97 0.81 0.88 G 0.03 0.19 0.12 0000 --- --- --- --- 000147 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 000252 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 000374 00000 ------------ T 0.97 0.93 0.95 C 0.03 0.07 0.05 0000 --- --- --- --- 001555 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 002076 00029 5' UTR C 0.83 0.87 0.85 T 0.17 0.13 0.15 0000 --- --- --- --- 002107 00060 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002186 00000 ------------ G 0.86 0.68 0.78 C 0.14 0.32 0.22 0000 --- --- --- --- 002382 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002407 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 002499 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 002767 00000 ------------ T 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 003035 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003198 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 003354 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 004160 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025592 00000 ------------ C 0.68 0.83 0.76 G 0.32 0.17 0.24 0000 --- --- --- --- 025819 00000 ------------ C 0.70 0.83 0.76 G 0.30 0.17 0.24 0000 --- --- --- --- 025896 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 025947 00000 ------------ T 0.70 0.83 0.76 C 0.30 0.17 0.24 0000 --- --- --- --- 026233 00000 ------------ T 0.70 0.83 0.76 A 0.30 0.17 0.24 0000 --- --- --- --- 026614 00000 ------------ G 0.74 0.87 0.80 A 0.26 0.13 0.20 0000 --- --- --- --- 026867 00000 ------------ - 0.26 0.13 0.20 + 0.74 0.87 0.80 0000 --- --- --- --- 026948 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026955 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027032 00000 ------------ T 0.93 0.95 0.94 G 0.07 0.05 0.06 0000 --- --- --- --- 027447 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 028419 00000 ------------ - 0.28 0.20 0.24 + 0.72 0.80 0.76 0000 --- --- --- --- 028450 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 028769 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 028779 00000 ------------ G 0.72 0.83 0.77 A 0.28 0.17 0.23 0000 --- --- --- --- 028817 00000 ------------ T 0.72 0.83 0.77 C 0.28 0.17 0.23 0000 --- --- --- --- 065139 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065270 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 065413 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 065746 00000 ------------ C 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 065938 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 067222 00000 ------------ G 0.58 1.00 0.79 A 0.42 0.00 0.21 0000 --- --- --- --- 067461 00000 ------------ C 0.35 0.93 0.64 T 0.65 0.07 0.36 0000 --- --- --- --- 067626 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 067854 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 069064 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 069208 00000 ------------ A 0.85 0.46 0.66 G 0.15 0.54 0.34 0000 --- --- --- --- 069352 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 069399 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 069465 00000 ------------ A 0.77 0.93 0.85 G 0.23 0.07 0.15 0000 --- --- --- --- 069575 00000 ------------ G 0.35 0.93 0.64 A 0.65 0.07 0.36 0000 --- --- --- --- 074034 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 075095 00000 ------------ T 0.75 0.68 0.71 C 0.25 0.33 0.29 0000 --- --- --- --- 075161 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 075203 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 077605 00000 ------------ - 0.22 0.30 0.26 + 0.78 0.70 0.74 0000 --- --- --- --- 078135 00000 ------------ - 0.77 0.66 0.72 + 0.23 0.34 0.28 0000 --- --- --- --- 078330 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 079045 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 080695 00000 ------------ T 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 080884 00000 ------------ G 0.62 0.63 0.63 A 0.38 0.37 0.37 0000 --- --- --- --- 080889 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 081125 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 081272 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 081364 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 081427 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 081511 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 081556 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 082134 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 088446 00000 ------------ T 0.77 0.64 0.70 C 0.23 0.36 0.30 0000 --- --- --- --- 088660 00000 ------------ G 0.62 1.00 0.81 A 0.38 0.00 0.19 0000 --- --- --- --- 088664 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 088676 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 088789 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 088826 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 091203 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 091211 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 091219 00000 ------------ C 0.81 0.50 0.66 T 0.19 0.50 0.34 0000 --- --- --- --- 091366 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 091698 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 095094 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 095644 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 095719 00000 ------------ G 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 095846 00000 ------------ - 0.61 0.52 0.55 + 0.39 0.48 0.45 0000 --- --- --- --- 095872 00000 ------------ T 0.91 0.89 0.90 C 0.09 0.11 0.10 0000 --- --- --- --- 097399 00000 ------------ C 0.68 0.50 0.60 T 0.32 0.50 0.40 0000 --- --- --- --- 097891 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 102067 00000 ------------ A 0.76 0.57 0.67 G 0.24 0.42 0.33 0000 --- --- --- --- 102344 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 102409 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 102582 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 102674 00000 ------------ C 0.85 0.65 0.75 T 0.15 0.35 0.25 0000 --- --- --- --- 102804 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 102815 00000 ------------ A 0.63 1.00 0.82 G 0.37 0.00 0.18 0000 --- --- --- --- 103895 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 104149 00000 ------------ A 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 104167 00000 ------------ A 0.85 0.64 0.74 G 0.15 0.36 0.26 0000 --- --- --- --- 104394 00000 ------------ T 0.62 1.00 0.81 C 0.38 0.00 0.19 0000 --- --- --- --- 104893 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 104971 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 106672* 106693 00000 ------------ C 0.92 1.00 0.95 A 0.08 0.00 0.05 0000 --- --- --- --- 106874 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 107210 00000 ------------ G 0.84 0.50 0.68 A 0.16 0.50 0.32 0000 --- --- --- --- 107333 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 107501 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 109837 00000 ------------ C 0.98 0.89 0.93 G 0.02 0.11 0.07 0000 --- --- --- --- 109996 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 110133 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 110260 00000 ------------ A 0.67 0.52 0.60 G 0.33 0.48 0.40 0000 --- --- --- --- 110274 00000 ------------ A 0.91 0.73 0.82 T 0.09 0.27 0.18 0000 --- --- --- --- 110275 00000 ------------ C 0.91 0.73 0.82 A 0.09 0.27 0.18 0000 --- --- --- --- 110402 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 110440 00000 ------------ C 0.91 0.98 0.95 T 0.09 0.02 0.05 0000 --- --- --- --- 110578 00000 ------------ G 0.91 0.70 0.80 A 0.09 0.30 0.20 0000 --- --- --- --- 110622 00000 ------------ G 0.87 0.53 0.71 A 0.13 0.47 0.29 0000 --- --- --- --- 111607 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 111675 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 111911 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 111926 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 111984 00000 ------------ T 0.88 0.64 0.76 C 0.12 0.36 0.24 0000 --- --- --- --- 114106 00000 ------------ A 0.69 0.48 0.59 G 0.31 0.52 0.41 0000 --- --- --- --- 114152 00000 ------------ G 0.62 1.00 0.80 T 0.38 0.00 0.20 0000 --- --- --- --- 115177 00000 ------------ T 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 115330 00000 ------------ G 0.77 0.60 0.69 A 0.23 0.40 0.31 0000 --- --- --- --- 115432 00000 ------------ G 0.57 0.48 0.52 T 0.43 0.52 0.48 0000 --- --- --- --- 116255 00000 ------------ C 0.82 0.50 0.66 T 0.18 0.50 0.34 0000 --- --- --- --- 116256 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 116442 00000 ------------ A 0.97 0.81 0.89 G 0.03 0.19 0.11 0000 --- --- --- --- 118406 00000 ------------ A 0.88 0.64 0.76 C 0.12 0.36 0.24 0000 --- --- --- --- 118429 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 118445 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 118603 00000 ------------ A 0.81 0.48 0.65 G 0.19 0.52 0.35 0000 --- --- --- --- 119067 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 119091 00000 ------------ A 0.80 0.48 0.64 G 0.20 0.52 0.36 0000 --- --- --- --- 119752 00000 ------------ T 0.81 0.50 0.66 G 0.19 0.50 0.34 0000 --- --- --- --- 120563 00000 ------------ G 0.50 1.00 0.71 A 0.50 0.00 0.29 0000 --- --- --- --- 120741 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 120898 00000 ------------ G 0.91 0.98 0.94 A 0.09 0.02 0.06 0000 --- --- --- --- 121097 00000 ------------ T 0.50 1.00 0.74 C 0.50 0.00 0.26 0000 --- --- --- --- 121292 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 121539 00000 ------------ A 0.85 0.63 0.74 G 0.15 0.37 0.26 0000 --- --- --- --- 121593 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 121625 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 122052 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 122127 00000 ------------ G 0.77 0.54 0.66 T 0.23 0.46 0.34 0000 --- --- --- --- 122158 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 122250 00000 ------------ C 0.65 1.00 0.82 A 0.35 0.00 0.18 0000 --- --- --- --- 122282 00000 ------------ G 0.77 0.52 0.65 C 0.23 0.48 0.35 0000 --- --- --- --- 122392 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 122465 00000 ------------ G 0.90 0.89 0.89 A 0.10 0.11 0.11 0000 --- --- --- --- 122562 00000 ------------ A 0.81 0.50 0.65 G 0.19 0.50 0.35 0000 --- --- --- --- 122693 00000 ------------ G 0.88 0.68 0.79 A 0.12 0.32 0.21 0000 --- --- --- --- 122766 00000 ------------ A 0.85 0.60 0.76 C 0.15 0.40 0.24 0000 --- --- --- --- 123937 00000 ------------ G 0.80 0.48 0.65 C 0.20 0.52 0.35 0000 --- --- --- --- 127599 00000 ------------ C 0.88 0.75 0.81 T 0.12 0.25 0.19 0000 --- --- --- --- 127634 00000 ------------ A 0.80 0.53 0.67 G 0.20 0.47 0.33 0000 --- --- --- --- 129056 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 129434 00000 ------------ A 0.88 0.70 0.79 T 0.12 0.30 0.21 0000 --- --- --- --- 129666 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 129719 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 129924 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 130041 00000 ------------ A 0.91 0.70 0.81 G 0.09 0.30 0.19 0000 --- --- --- --- 130043 00000 ------------ A 0.89 0.70 0.80 T 0.11 0.30 0.20 0000 --- --- --- --- 130061 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 130808 00913 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0245 TTC TTT PHE(F) PHE(F) 133724 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 133796 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 134148 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 134215 00000 ------------ G 0.88 0.76 0.82 A 0.12 0.24 0.18 0000 --- --- --- --- 134240 00000 ------------ C 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 134730 00000 ------------ - 0.67 0.18 0.43 + 0.33 0.82 0.57 0000 --- --- --- --- 135547 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 135776 00000 ------------ A 0.89 0.70 0.79 G 0.11 0.30 0.21 0000 --- --- --- --- 136171 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 138088 00000 ------------ C 0.87 0.70 0.79 A 0.13 0.30 0.21 0000 --- --- --- --- 138556 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 138814 00000 ------------ A 0.81 0.46 0.64 G 0.19 0.54 0.36 0000 --- --- --- --- 139033 00000 ------------ A 0.90 0.72 0.81 G 0.10 0.28 0.19 0000 --- --- --- --- 139090 00000 ------------ A 0.90 0.72 0.81 G 0.10 0.28 0.19 0000 --- --- --- --- 139196 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 139315 00000 ------------ G 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 139383 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 139539 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 139644 00000 ------------ C 0.92 0.73 0.83 T 0.08 0.27 0.17 0000 --- --- --- --- 139728 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 140143 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 140213 00000 ------------ A 0.76 1.00 0.89 G 0.24 0.00 0.11 0000 --- --- --- --- 140446 00000 ------------ A 0.96 1.00 0.99 G 0.04 0.00 0.01 0000 --- --- --- --- 142619 00000 ------------ C 0.73 1.00 0.86 G 0.27 0.00 0.14 0000 --- --- --- --- 142643 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 142839 00000 ------------ A 0.63 0.64 0.64 C 0.37 0.36 0.36 0000 --- --- --- --- 142914 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 143263 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 144462 00000 ------------ A 0.88 0.78 0.83 G 0.12 0.22 0.17 0000 --- --- --- --- 144471 00000 ------------ C 0.50 0.58 0.54 T 0.50 0.42 0.46 0000 --- --- --- --- 144695 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 147449 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 147516 00000 ------------ C 0.85 0.85 0.85 G 0.15 0.15 0.15 0000 --- --- --- --- 147586 00000 ------------ G 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 148157 01519 SYNON C 0.90 0.87 0.88 T 0.10 0.13 0.12 0447 CAC CAT HIS(H) HIS(H) 148495 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 148527 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 148594 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003354: T 026867: GTAA 028419: AATTAATT 028450: GA 077605: T 078135: T 095846: T 129666: A 134730: G 148495: C The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 106672 A 0.04 0.05 0.05 C 0.09 0.00 0.05 G 0.87 0.95 0.90 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000182 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000362 00000 ------------ C 0.93 0.94 0.93 G 0.07 0.06 0.07 0000 --- --- --- --- 000376 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 000426 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000429 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000597 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000611 00000 ------------ A 0.52 0.59 0.55 G 0.48 0.41 0.45 0000 --- --- --- --- 000636 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000697 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000770 00000 ------------ T 0.52 0.62 0.56 C 0.48 0.38 0.44 0000 --- --- --- --- 001149 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001176 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 001319 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001386 00000 ------------ C 0.67 0.48 0.58 T 0.33 0.52 0.42 0000 --- --- --- --- 001406 00000 ------------ C 0.48 0.61 0.54 G 0.52 0.39 0.46 0000 --- --- --- --- 001705 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002322 00000 ------------ G 0.58 0.61 0.60 A 0.42 0.39 0.40 0000 --- --- --- --- 002405 00000 ------------ C 0.81 0.67 0.74 T 0.19 0.33 0.26 0000 --- --- --- --- 002418 00000 ------------ G 0.73 0.48 0.61 A 0.27 0.52 0.39 0000 --- --- --- --- 002579 00021 5' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002583 00025 5' UTR T 0.61 0.48 0.55 A 0.39 0.52 0.45 0000 --- --- --- --- 002637 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 003220 00000 ------------ G 0.98 0.93 0.95 A 0.02 0.07 0.05 0000 --- --- --- --- 003249 00000 ------------ G 0.93 0.98 0.95 A 0.07 0.02 0.05 0000 --- --- --- --- 003577 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003920 00000 ------------ C 0.75 0.47 0.62 T 0.25 0.53 0.38 0000 --- --- --- --- 004483 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004515 00000 ------------ C 0.62 0.61 0.62 T 0.38 0.39 0.38 0000 --- --- --- --- 004588 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004732 00000 ------------ T 0.83 0.74 0.79 C 0.17 0.26 0.21 0000 --- --- --- --- 004800 00000 ------------ C 0.89 0.80 0.85 G 0.11 0.20 0.15 0000 --- --- --- --- 004813 00000 ------------ G 0.86 0.74 0.80 A 0.14 0.26 0.20 0000 --- --- --- --- 004919 00000 ------------ G 0.76 0.65 0.70 A 0.24 0.35 0.30 0000 --- --- --- --- 004956 00000 ------------ C 0.95 0.67 0.81 T 0.05 0.33 0.19 0000 --- --- --- --- 005068 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005867 00000 ------------ G 0.88 0.79 0.83 A 0.12 0.21 0.17 0000 --- --- --- --- 006094 00000 ------------ G 0.52 0.60 0.56 A 0.48 0.40 0.44 0000 --- --- --- --- 006187 00000 ------------ T 0.78 0.65 0.72 C 0.22 0.35 0.28 0000 --- --- --- --- 006200 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 006379 00000 ------------ A 0.85 0.74 0.79 G 0.15 0.26 0.21 0000 --- --- --- --- 006762 00000 ------------ G 0.89 0.75 0.82 A 0.11 0.25 0.18 0000 --- --- --- --- 007779 00000 ------------ + 0.12 0.28 0.20 - 0.88 0.72 0.80 0000 --- --- --- --- 007939 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 008058 00000 ------------ C 0.87 0.72 0.80 T 0.13 0.28 0.20 0000 --- --- --- --- 008915 00000 ------------ G 0.89 0.72 0.80 T 0.11 0.28 0.20 0000 --- --- --- --- 009198 00000 ------------ A 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 009534 00000 ------------ C 0.57 0.67 0.62 T 0.43 0.33 0.38 0000 --- --- --- --- 009554 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009685 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009885 00000 ------------ G 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 010295 00704 SYNON G 0.93 1.00 0.97 A 0.07 0.00 0.03 0210 CCG CCA PRO(P) PRO(P) 010454 00000 ------------ G 0.91 0.84 0.88 T 0.09 0.16 0.12 0000 --- --- --- --- 011109 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011310 00842 SYNON T 0.57 0.63 0.60 C 0.43 0.37 0.40 0256 GAT GAC ASP(D) ASP(D) 012034 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012109 00000 ------------ C 0.73 0.65 0.69 T 0.27 0.35 0.31 0000 --- --- --- --- 012128 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 012228 00000 ------------ C 0.89 0.72 0.80 T 0.11 0.28 0.20 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007779: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000837 00000 ------------ C 0.98 0.84 0.91 G 0.02 0.16 0.09 0000 --- --- --- --- 000951 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001940 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002313 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 002674 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 002973 00000 ------------ C 0.80 0.64 0.72 T 0.20 0.36 0.28 0000 --- --- --- --- 003063 00000 ------------ G 0.80 0.64 0.72 A 0.20 0.36 0.28 0000 --- --- --- --- 003402* 003514 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003600 00000 ------------ T 0.94 0.98 0.96 C 0.06 0.02 0.04 0000 --- --- --- --- 003615 00000 ------------ G 0.69 1.00 0.84 A 0.31 0.00 0.16 0000 --- --- --- --- 004054 00000 ------------ T 0.83 0.64 0.73 C 0.17 0.36 0.27 0000 --- --- --- --- 004847 00000 ------------ C 0.69 1.00 0.84 G 0.31 0.00 0.16 0000 --- --- --- --- 004946 00000 ------------ T 0.79 0.64 0.72 C 0.21 0.36 0.28 0000 --- --- --- --- 005329 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 005515 00000 ------------ T 0.79 0.63 0.71 C 0.21 0.37 0.29 0000 --- --- --- --- 006118 00679 NON-SYN A 0.94 0.82 0.88 G 0.06 0.18 0.12 0219 AGT GGT SER(S) GLY(G) 006196 00757 3' UTR G 0.79 0.66 0.73 C 0.21 0.34 0.27 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Codon3 Amino1 Amino2 Amino3 003402 A 0.04 0.16 0.10 C 0.23 0.36 0.29 G 0.73 0.48 0.61 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000288 00000 ------------ C 0.77 0.79 0.78 T 0.23 0.21 0.22 0000 --- --- --- --- 000430 00000 ------------ A 0.84 0.50 0.67 G 0.16 0.50 0.33 0000 --- --- --- --- 000543 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 000626 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000804 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001194 00000 ------------ G 0.75 0.82 0.78 T 0.25 0.18 0.22 0000 --- --- --- --- 001368 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006952 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007052 00000 ------------ - 0.02 0.09 0.05 + 0.98 0.91 0.95 0000 --- --- --- --- 012189 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 012241 00000 ------------ A 0.98 0.94 0.96 G 0.02 0.06 0.04 0000 --- --- --- --- 012267 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012369 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012612 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013154 00000 ------------ G 0.91 0.80 0.86 A 0.09 0.20 0.14 0000 --- --- --- --- 013616 00000 ------------ A 0.96 0.91 0.93 T 0.04 0.09 0.07 0000 --- --- --- --- 014310 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 014351 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017983 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 018079 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 018163 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026890 00000 ------------ T 0.95 0.91 0.93 C 0.05 0.09 0.07 0000 --- --- --- --- 027862 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 028013 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028478 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028819 00000 ------------ T 0.97 0.91 0.94 C 0.03 0.09 0.06 0000 --- --- --- --- 033464 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033556 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033585 00000 ------------ G 0.86 0.48 0.67 A 0.14 0.52 0.33 0000 --- --- --- --- 040139 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 040453 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040570 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 040667 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 040737 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 047379 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 048263 00000 ------------ G 0.83 0.52 0.68 A 0.17 0.48 0.32 0000 --- --- --- --- 049497 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 049612 00000 ------------ G 0.72 0.85 0.79 A 0.28 0.15 0.21 0000 --- --- --- --- 050056 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 050103 00000 ------------ C 0.85 0.52 0.69 T 0.15 0.48 0.31 0000 --- --- --- --- 056642 00000 ------------ T 0.85 0.50 0.68 C 0.15 0.50 0.32 0000 --- --- --- --- 057197 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 057210 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 057521 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 061769 00000 ------------ C 0.88 0.50 0.69 A 0.12 0.50 0.31 0000 --- --- --- --- 062027 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 062309 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 062460 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 062632 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 062844 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 062966 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 064874 00000 ------------ G 0.95 0.50 0.72 A 0.05 0.50 0.28 0000 --- --- --- --- 065858 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 065992 00000 ------------ - 0.98 0.89 0.94 + 0.02 0.11 0.06 0000 --- --- --- --- 066205 00000 ------------ T 0.76 0.39 0.57 A 0.24 0.61 0.43 0000 --- --- --- --- 066367 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 066847 00000 ------------ T 0.68 0.87 0.79 C 0.32 0.13 0.21 0000 --- --- --- --- 066883 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 067322 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 067486 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 068671 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 068897 00000 ------------ C 0.88 0.48 0.68 A 0.12 0.52 0.32 0000 --- --- --- --- 068931 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 069323 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 071188 00000 ------------ C 0.77 0.93 0.85 G 0.23 0.07 0.15 0000 --- --- --- --- 072749 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 073465 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 074073 00000 ------------ A 0.98 0.89 0.94 C 0.02 0.11 0.06 0000 --- --- --- --- 074126 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 074127 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 074345 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 075217 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 075797 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 079897 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 080591 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 081344 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 081483 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 081567 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 082292 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 083955 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 084046 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 084466 00000 ------------ A 0.90 0.80 0.85 C 0.10 0.20 0.15 0000 --- --- --- --- 084806 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 084855 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 086503 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 086961 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 088737 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 088922 00000 ------------ A 0.77 0.93 0.85 G 0.23 0.07 0.15 0000 --- --- --- --- 089535 00000 ------------ T 0.94 0.80 0.87 C 0.06 0.20 0.13 0000 --- --- --- --- 090344 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 090535 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 090893 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 091734 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000543: TTAA 007052: T 047379: T 065992: A 068671: C 075797: AT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000274 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 000398 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000557 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 000643 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000737 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 000911 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001034 00000 ------------ G 0.78 1.00 0.89 A 0.22 0.00 0.11 0000 --- --- --- --- 001559 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001640 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001817 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001882 00000 ------------ A 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 001981 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001984 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002188 00000 ------------ A 0.93 0.77 0.86 G 0.07 0.23 0.14 0000 --- --- --- --- 002220 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002241 00000 ------------ G 0.96 0.77 0.87 A 0.04 0.23 0.13 0000 --- --- --- --- 002263 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002590 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002632 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002661 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002773 00000 ------------ A 0.83 0.78 0.81 G 0.17 0.22 0.19 0000 --- --- --- --- 003145 00000 ------------ G 0.98 0.76 0.87 A 0.02 0.24 0.13 0000 --- --- --- --- 003168 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003385 -----** NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0070 GAA AAA GLU(E) LYS(K) 003422 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 003511 00000 ------------ + 0.09 0.18 0.14 - 0.91 0.82 0.86 0000 --- --- --- --- 003759 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 003816 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004121 00000 ------------ C 0.83 0.78 0.80 T 0.17 0.22 0.20 0000 --- --- --- --- 004159 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004203 -----** SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0085 TAT TAC TYR(Y) TYR(Y) 004248 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004256 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004667 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006621 00000 ------------ C 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 006672 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006681 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006733 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007339 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007434 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007503 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007629 00000 ------------ T 0.58 0.71 0.65 A 0.42 0.29 0.35 0000 --- --- --- --- 007739 00000 ------------ C 0.81 1.00 0.91 T 0.19 0.00 0.09 0000 --- --- --- --- 007822 -----** SYNON G 0.80 1.00 0.91 A 0.20 0.00 0.09 0149 ACG ACA THR(T) THR(T) 007924 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007931 00000 ------------ T 0.95 0.74 0.84 A 0.05 0.26 0.16 0000 --- --- --- --- 008080 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 008253 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008435 00000 ------------ G 0.90 0.74 0.82 A 0.10 0.26 0.18 0000 --- --- --- --- 008550 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008648 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008707 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008843 00000 ------------ A 0.71 0.76 0.73 T 0.29 0.24 0.27 0000 --- --- --- --- 008870 00000 ------------ G 0.96 0.76 0.87 A 0.04 0.24 0.13 0000 --- --- --- --- 009058 00000 ------------ C 0.96 0.62 0.80 T 0.04 0.38 0.20 0000 --- --- --- --- 009602 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 009823 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009977 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 010109 00000 ------------ C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 010352 00000 ------------ C 0.85 0.71 0.78 T 0.15 0.29 0.22 0000 --- --- --- --- 010399 00000 ------------ A 0.85 0.74 0.80 C 0.15 0.26 0.20 0000 --- --- --- --- 010520 00000 ------------ A 0.94 0.74 0.84 G 0.06 0.26 0.16 0000 --- --- --- --- 010699 00000 ------------ G 0.85 0.74 0.80 A 0.15 0.26 0.20 0000 --- --- --- --- 010709 00000 ------------ C 0.85 0.74 0.80 G 0.15 0.26 0.20 0000 --- --- --- --- 010815 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 010818 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 011060 00000 ------------ - 0.48 0.75 0.61 + 0.52 0.25 0.39 0000 --- --- --- --- 011070 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011400 00000 ------------ T 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 011403 00000 ------------ G 0.52 0.74 0.63 A 0.48 0.26 0.37 0000 --- --- --- --- 011406 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011452 00000 ------------ C 0.95 0.74 0.85 T 0.05 0.26 0.15 0000 --- --- --- --- 011511 00000 ------------ G 0.68 1.00 0.84 A 0.32 0.00 0.16 0000 --- --- --- --- 011872 00000 ------------ G 0.85 0.74 0.80 C 0.15 0.26 0.20 0000 --- --- --- --- 012108 00000 ------------ G 0.94 0.74 0.84 T 0.06 0.26 0.16 0000 --- --- --- --- 012125 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012219 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012744 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012918 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012954 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013011 00000 ------------ C 0.95 0.75 0.85 G 0.05 0.25 0.15 0000 --- --- --- --- 013038 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013187 00000 ------------ C 0.55 0.74 0.64 T 0.45 0.26 0.36 0000 --- --- --- --- 013235 00000 ------------ A 0.84 0.74 0.79 G 0.16 0.26 0.21 0000 --- --- --- --- 013465 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013470 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013820 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 013836 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 014428 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014522 00000 ------------ G 0.83 0.74 0.79 T 0.17 0.26 0.21 0000 --- --- --- --- 014682 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014728 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 014759 00000 ------------ A 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 014764 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015021 -----** NON-SYN G 0.98 0.98 0.98 A 0.02 0.02 0.02 0295 CGC CAC ARG(R) HIS(H) 015040 -----** SYNON C 0.92 1.00 0.96 T 0.08 0.00 0.04 0301 AGC AGT SER(S) SER(S) 015085 -----** SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0316 ACG ACA THR(T) THR(T) 015375 -----** 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015731 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015996 00000 ------------ G 0.93 0.72 0.84 A 0.07 0.28 0.16 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003511: C 011060: TGCT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000176 00000 ------------ T 0.91 0.91 0.91 C 0.09 0.09 0.09 0000 --- --- --- --- 000327 00000 ------------ G 0.91 0.91 0.91 A 0.09 0.09 0.09 0000 --- --- --- --- 000384 00000 ------------ T 0.60 0.82 0.71 C 0.40 0.18 0.29 0000 --- --- --- --- 000528 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 001007 00000 ------------ A 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 001094 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001119 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001182 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 001218 00000 ------------ A 0.89 0.95 0.92 G 0.11 0.05 0.08 0000 --- --- --- --- 001605 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001990 00066 5' UTR G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 002175 00157 NON-SYN C 1.00 0.95 0.98 T 0.00 0.05 0.02 0008 CGG TGG ARG(R) TRP(W) 002203 00185 NON-SYN C 0.87 0.91 0.89 T 0.13 0.09 0.11 0017 CCG CTG PRO(P) LEU(L) 002411 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 002424 00000 ------------ T 0.81 0.98 0.89 C 0.19 0.02 0.11 0000 --- --- --- --- 002937 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 003036 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 003112 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 003344 00000 ------------ A 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 003950 00000 ------------ G 0.87 0.87 0.87 A 0.13 0.13 0.13 0000 --- --- --- --- 004185 00000 ------------ T 0.98 0.91 0.94 C 0.02 0.09 0.06 0000 --- --- --- --- 004236 00000 ------------ G 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 004446 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004487 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 004624 00000 ------------ C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 004643 00000 ------------ G 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 004774 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 005143 00000 ------------ T 0.61 0.98 0.80 C 0.39 0.02 0.20 0000 --- --- --- --- 005426 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005580 00000 ------------ G 0.60 0.96 0.78 A 0.40 0.04 0.22 0000 --- --- --- --- 005977 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006111 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006207 00000 ------------ T 0.67 1.00 0.84 C 0.33 0.00 0.16 0000 --- --- --- --- 006215 00000 ------------ A 0.73 1.00 0.87 C 0.27 0.00 0.13 0000 --- --- --- --- 006320 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 006340 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 006368 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 006391 00000 ------------ A 0.93 0.92 0.93 T 0.07 0.08 0.07 0000 --- --- --- --- 006923 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007160 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008616 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008902 00258 SYNON G 0.82 0.98 0.91 A 0.17 0.02 0.09 0041 CAG CAA GLN(Q) GLN(Q) 008937 00293 NON-SYN G 0.97 1.00 0.99 A 0.03 0.00 0.01 0053 CGC CAC ARG(R) HIS(H) 008983 00339 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0068 TGC TGT CYS(C) CYS(C) 009022 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 009196 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009392 00000 ------------ G 0.57 0.89 0.74 C 0.42 0.11 0.26 0000 --- --- --- --- 009843 00581 NON-SYN G 0.98 0.98 0.98 T 0.02 0.02 0.02 0149 CGT CTT ARG(R) LEU(L) 010403 00000 ------------ T 0.83 0.89 0.86 C 0.17 0.11 0.14 0000 --- --- --- --- 010478 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010482 00000 ------------ G 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 010793 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 011056 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 011177 00000 ------------ G 0.54 0.88 0.69 A 0.46 0.12 0.31 0000 --- --- --- --- 011693 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 011757 00000 ------------ C 0.44 0.91 0.67 T 0.56 0.09 0.33 0000 --- --- --- --- 011843 00000 ------------ T 0.48 0.91 0.69 C 0.52 0.09 0.31 0000 --- --- --- --- 011916 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011973 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012080 00000 ------------ C 0.48 0.91 0.69 G 0.52 0.09 0.31 0000 --- --- --- --- 012488 00774 SYNON C 0.46 0.91 0.68 A 0.54 0.09 0.32 0213 GGC GGA GLY(G) GLY(G) 012669 00844 NON-SYN C 1.00 0.98 0.99 A 0.00 0.02 0.01 0237 CTG ATG LEU(L) MET(M) 012841 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 013054 00000 ------------ A 0.50 0.91 0.72 G 0.50 0.09 0.28 0000 --- --- --- --- 013119 00000 ------------ G 0.58 0.91 0.76 C 0.42 0.09 0.24 0000 --- --- --- --- 013615 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013637 00000 ------------ T 0.88 0.93 0.90 C 0.12 0.07 0.10 0000 --- --- --- --- 014439 00000 ------------ T 0.43 0.89 0.64 C 0.57 0.11 0.36 0000 --- --- --- --- 014807 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 014908 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015065 00000 ------------ T 0.50 0.87 0.68 C 0.50 0.13 0.32 0000 --- --- --- --- 015075 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015168 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 015174 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 015397 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 015591 00000 ------------ C 0.43 0.90 0.65 T 0.57 0.10 0.35 0000 --- --- --- --- 015639 00000 ------------ C 0.43 0.86 0.64 T 0.57 0.14 0.36 0000 --- --- --- --- 015676 00000 ------------ T 0.44 0.86 0.63 G 0.56 0.14 0.37 0000 --- --- --- --- 015801 00000 ------------ G 0.81 1.00 0.90 A 0.19 0.00 0.10 0000 --- --- --- --- 016145 00000 ------------ A 0.44 0.86 0.64 C 0.56 0.14 0.36 0000 --- --- --- --- 016158 00000 ------------ G 0.44 0.86 0.64 C 0.56 0.14 0.36 0000 --- --- --- --- 016228 00000 ------------ T 0.44 0.86 0.64 C 0.56 0.14 0.36 0000 --- --- --- --- 016332 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016383 00000 ------------ G 0.44 0.86 0.64 A 0.56 0.14 0.36 0000 --- --- --- --- 016567 00000 ------------ A 0.45 0.87 0.67 G 0.55 0.13 0.33 0000 --- --- --- --- 016587 00000 ------------ T 0.79 1.00 0.90 C 0.21 0.00 0.10 0000 --- --- --- --- 016616 00000 ------------ G 0.72 0.88 0.80 T 0.28 0.12 0.20 0000 --- --- --- --- 016627 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 017267 00000 ------------ G 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 017292 00000 ------------ A 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 017328 00000 ------------ A 0.44 0.89 0.65 G 0.56 0.11 0.35 0000 --- --- --- --- 018654 00000 ------------ T 0.66 0.85 0.76 C 0.34 0.15 0.24 0000 --- --- --- --- 018666 00000 ------------ A 0.43 0.83 0.64 G 0.57 0.17 0.36 0000 --- --- --- --- 018699 00000 ------------ T 0.68 0.85 0.77 G 0.32 0.15 0.23 0000 --- --- --- --- 018769 00000 ------------ G 0.80 0.98 0.89 A 0.20 0.02 0.11 0000 --- --- --- --- 019123 00000 ------------ G 0.98 0.97 0.98 A 0.02 0.03 0.02 0000 --- --- --- --- 019177 00000 ------------ T 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 019199 00000 ------------ T 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 019213 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 020663 00000 ------------ T 0.78 1.00 0.89 C 0.22 0.00 0.11 0000 --- --- --- --- 020695 00000 ------------ T 0.78 1.00 0.89 C 0.22 0.00 0.11 0000 --- --- --- --- 020810 00000 ------------ T 0.78 1.00 0.89 C 0.22 0.00 0.11 0000 --- --- --- --- 020936 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 020994 00000 ------------ G 0.80 1.00 0.90 C 0.20 0.00 0.10 0000 --- --- --- --- 021644 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021665 00000 ------------ A 0.50 1.00 0.74 G 0.50 0.00 0.26 0000 --- --- --- --- 021674 00000 ------------ C 0.96 0.86 0.91 T 0.04 0.14 0.09 0000 --- --- --- --- 021688 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 021697 00000 ------------ C 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 021825 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021864 00000 ------------ A 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 022048 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 022120 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 022137 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 022701 00000 ------------ - 0.86 1.00 0.93 + 0.14 0.00 0.07 0000 --- --- --- --- 023011 00000 ------------ T 0.79 1.00 0.89 G 0.21 0.00 0.11 0000 --- --- --- --- 023136 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 023217 01632 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0499 GCG GCA ALA(A) ALA(A) 023232 01647 SYNON T 0.77 1.00 0.88 C 0.23 0.00 0.12 0504 CCT CCC PRO(P) PRO(P) 023607 02022 3' UTR C 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 023884 02299 3' UTR T 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 023961 02376 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024010 02425 3' UTR A 0.62 1.00 0.80 C 0.38 0.00 0.20 0000 --- --- --- --- 024105 02520 3' UTR A 0.60 0.97 0.77 G 0.40 0.03 0.23 0000 --- --- --- --- 024382 02797 3' UTR A 0.62 1.00 0.79 G 0.38 0.00 0.21 0000 --- --- --- --- 024483 02898 3' UTR G 0.61 1.00 0.78 T 0.39 0.00 0.22 0000 --- --- --- --- 024486 02901 3' UTR C 0.61 1.00 0.78 G 0.39 0.00 0.22 0000 --- --- --- --- 024554 02969 3' UTR A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 024627 03042 3' UTR G 0.98 0.97 0.98 C 0.02 0.03 0.02 0000 --- --- --- --- 024986 03401 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025070 03485 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 025895 04310 3' UTR C 0.96 0.88 0.92 A 0.04 0.12 0.08 0000 --- --- --- --- 026002 04417 3' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 026013 04428 3' UTR G 0.98 0.97 0.98 A 0.02 0.03 0.02 0000 --- --- --- --- 026054 04469 3' UTR G 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 026207 04622 3' UTR T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 026245 04660 3' UTR C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 026369 04784 3' UTR A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026415 04830 3' UTR T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 028192 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028218 00000 ------------ G 0.61 0.98 0.80 A 0.39 0.02 0.20 0000 --- --- --- --- 028406 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028411 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001182: A 010793: T 022701: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000253 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 000466 00000 ------------ A 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 000663 00000 ------------ - 0.17 0.02 0.10 + 0.83 0.98 0.90 0000 --- --- --- --- 000703 00000 ------------ A 0.83 0.80 0.82 G 0.17 0.20 0.18 0000 --- --- --- --- 000798 00000 ------------ A 0.91 0.87 0.89 G 0.09 0.13 0.11 0000 --- --- --- --- 000842 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 000861 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 001115 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001228 00000 ------------ G 0.71 0.76 0.73 C 0.29 0.24 0.27 0000 --- --- --- --- 001279 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001339 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 001389 00000 ------------ T 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 001833 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001934 00000 ------------ C 1.00 0.95 0.97 G 0.00 0.05 0.03 0000 --- --- --- --- 002067 00072 5' UTR C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 002326 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 002331 00000 ------------ C 0.82 0.79 0.80 T 0.17 0.21 0.20 0000 --- --- --- --- 002454 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 002548 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 002976 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003135 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003355 00440 SYNON G 0.91 0.76 0.83 C 0.09 0.24 0.17 0102 GTG GTC VAL(V) VAL(V) 003479 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004285 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004311 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004414 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004958 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004964 00000 ------------ - 0.09 0.17 0.13 + 0.91 0.83 0.87 0000 --- --- --- --- 004974 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 005072 00000 ------------ A 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 005229 00000 ------------ T 0.50 0.80 0.65 G 0.50 0.20 0.35 0000 --- --- --- --- 005625 00000 ------------ G 0.69 0.83 0.76 A 0.31 0.17 0.24 0000 --- --- --- --- 005694 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 005883 01034 SYNON T 0.94 1.00 0.97 C 0.06 0.00 0.03 0300 GAT GAC ASP(D) ASP(D) 006064 00000 ------------ T 0.88 0.83 0.85 C 0.12 0.17 0.15 0000 --- --- --- --- 006474 01343 SYNON T 0.93 1.00 0.97 C 0.07 0.00 0.03 0403 CAT CAC HIS(H) HIS(H) 006920 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007243 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007244 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007270 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007344 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007357 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007415 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007602 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 008344 02226 3' UTR - 0.35 0.00 0.18 + 0.65 1.00 0.82 0000 --- --- --- --- 008494 02376 3' UTR T 0.43 0.70 0.57 C 0.57 0.30 0.43 0000 --- --- --- --- 008565 02447 3' UTR G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 008696 02578 3' UTR G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 009123 03005 3' UTR C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 009402 03284 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009943 03825 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010279 04161 3' UTR T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 010287 04169 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010355 04237 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010494 04376 3' UTR C 0.62 0.98 0.80 T 0.38 0.02 0.20 0000 --- --- --- --- 010848 00000 ------------ G 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 010849 00000 ------------ C 0.83 0.83 0.83 A 0.17 0.17 0.17 0000 --- --- --- --- 010935 00000 ------------ G 0.60 0.80 0.70 A 0.40 0.20 0.30 0000 --- --- --- --- 011027 00000 ------------ A 0.98 0.89 0.93 G 0.02 0.11 0.07 0000 --- --- --- --- 011124 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011752 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011834 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012183 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012265 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012309 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012337 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000663: GT 001339: TAG 004964: CA 005694: TTTA 008344: TTATA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000649 00000 ------------ A 0.82 0.92 0.87 T 0.18 0.08 0.13 0000 --- --- --- --- 000804 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 000889 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 001130 00000 ------------ T 0.93 0.73 0.85 C 0.07 0.27 0.15 0000 --- --- --- --- 001233 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001278 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001317 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001587 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 001760 00037 5' UTR C 0.90 0.70 0.80 T 0.10 0.30 0.20 0000 --- --- --- --- 001821 00098 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0017 GAC GAT ASP(D) ASP(D) 001875 00152 SYNON C 0.75 0.77 0.76 T 0.25 0.23 0.24 0035 TCC TCT SER(S) SER(S) 001977 00000 ------------ G 0.94 0.74 0.84 C 0.06 0.26 0.16 0000 --- --- --- --- 002015 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002018 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002019 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002107 00000 ------------ C 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 002274 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002355 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002581 00000 ------------ G 0.67 0.93 0.79 A 0.33 0.07 0.21 0000 --- --- --- --- 002611 00000 ------------ G 0.50 0.64 0.57 A 0.50 0.36 0.43 0000 --- --- --- --- 002649 00000 ------------ G 0.83 0.90 0.87 A 0.17 0.10 0.13 0000 --- --- --- --- 003441 00000 ------------ - 0.00 0.17 0.08 + 1.00 0.83 0.92 0000 --- --- --- --- 004333 00000 ------------ A 0.95 0.95 0.95 G 0.05 0.05 0.05 0000 --- --- --- --- 004463 00000 ------------ G 0.57 0.61 0.59 A 0.43 0.39 0.41 0000 --- --- --- --- 004493 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 004534 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004579 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005009 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005022 00000 ------------ G 0.55 0.61 0.58 A 0.45 0.39 0.42 0000 --- --- --- --- 005285 00000 ------------ A 0.90 0.71 0.81 C 0.10 0.29 0.19 0000 --- --- --- --- 013113 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 013445 00000 ------------ G 0.83 0.72 0.77 A 0.17 0.28 0.23 0000 --- --- --- --- 013462 00000 ------------ A 0.93 0.91 0.92 G 0.07 0.09 0.08 0000 --- --- --- --- 013730 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013969 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014022 00000 ------------ A 0.86 0.73 0.79 C 0.14 0.27 0.21 0000 --- --- --- --- 014154 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014239 00000 ------------ A 0.86 0.72 0.79 G 0.14 0.28 0.21 0000 --- --- --- --- 014387 00000 ------------ G 0.95 0.73 0.83 A 0.05 0.27 0.17 0000 --- --- --- --- 014433 00000 ------------ G 0.90 0.73 0.81 A 0.10 0.27 0.19 0000 --- --- --- --- 014547 00000 ------------ - 0.85 0.71 0.78 + 0.15 0.29 0.22 0000 --- --- --- --- 014953 00000 ------------ T 0.87 0.72 0.79 C 0.13 0.28 0.21 0000 --- --- --- --- 015081 00000 ------------ C 0.85 0.72 0.79 T 0.15 0.28 0.21 0000 --- --- --- --- 015268 00000 ------------ G 0.85 0.73 0.79 A 0.15 0.27 0.21 0000 --- --- --- --- 015324 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 015493 00000 ------------ A 0.94 0.76 0.85 T 0.06 0.24 0.15 0000 --- --- --- --- 015679 00000 ------------ C 0.67 0.91 0.79 T 0.33 0.09 0.21 0000 --- --- --- --- 015694 00000 ------------ G 0.69 0.52 0.61 A 0.31 0.48 0.39 0000 --- --- --- --- 015741 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015860 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 015874 00000 ------------ G 0.90 0.73 0.82 A 0.10 0.27 0.18 0000 --- --- --- --- 024031 00000 ------------ C 0.87 0.70 0.79 T 0.13 0.30 0.21 0000 --- --- --- --- 024045 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 024080 00000 ------------ G 0.85 0.68 0.77 C 0.15 0.32 0.23 0000 --- --- --- --- 024118 00000 ------------ T 0.87 0.70 0.79 G 0.13 0.30 0.21 0000 --- --- --- --- 024145 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024284 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 024300 00000 ------------ C 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 024531 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 024570 00000 ------------ A 0.86 0.70 0.78 T 0.14 0.30 0.22 0000 --- --- --- --- 024611 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024728 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 024783 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024807 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024877 00000 ------------ T 1.00 0.68 0.84 C 0.00 0.32 0.16 0000 --- --- --- --- 025243 00000 ------------ T 0.63 0.64 0.63 C 0.37 0.36 0.37 0000 --- --- --- --- 025577 00000 ------------ A 0.63 0.62 0.63 G 0.37 0.38 0.37 0000 --- --- --- --- 025616 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 025738 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 025976 00000 ------------ T 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 026032 00000 ------------ A 0.79 0.90 0.84 G 0.21 0.10 0.16 0000 --- --- --- --- 026171 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 026440 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026840 00000 ------------ A 0.91 0.70 0.81 T 0.09 0.30 0.19 0000 --- --- --- --- 026890 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 027141 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 027902 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027976 00000 ------------ - 0.00 0.09 0.04 + 1.00 0.91 0.96 0000 --- --- --- --- 028032 00000 ------------ C 0.79 0.91 0.85 A 0.21 0.09 0.15 0000 --- --- --- --- 028075 00000 ------------ - 0.33 0.09 0.21 + 0.67 0.91 0.79 0000 --- --- --- --- 028136 00000 ------------ A 0.93 0.68 0.79 C 0.07 0.32 0.21 0000 --- --- --- --- 028401 00000 ------------ A 0.84 0.86 0.85 G 0.16 0.14 0.15 0000 --- --- --- --- 028643 00000 ------------ G 0.42 0.83 0.62 T 0.58 0.17 0.38 0000 --- --- --- --- 034400 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 034862 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 034879 00000 ------------ A 0.95 0.90 0.93 G 0.05 0.10 0.07 0000 --- --- --- --- 035932 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 036112 00000 ------------ C 1.00 0.93 0.96 T 0.00 0.07 0.04 0000 --- --- --- --- 036437 00000 ------------ G 0.86 0.70 0.78 A 0.14 0.30 0.22 0000 --- --- --- --- 036707 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 036792 00000 ------------ A 0.73 0.40 0.57 G 0.27 0.60 0.43 0000 --- --- --- --- 036927 00000 ------------ A 0.75 0.46 0.60 T 0.25 0.54 0.40 0000 --- --- --- --- 037006 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 037082 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 037093 00000 ------------ A 0.70 0.46 0.58 G 0.30 0.54 0.42 0000 --- --- --- --- 037259 00000 ------------ G 0.93 0.91 0.92 C 0.07 0.09 0.08 0000 --- --- --- --- 046431 00000 ------------ A 0.81 0.92 0.86 G 0.19 0.08 0.14 0000 --- --- --- --- 046687 00000 ------------ G 0.94 0.90 0.92 A 0.06 0.10 0.08 0000 --- --- --- --- 046918 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 047386 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 047545 00000 ------------ G 0.79 0.86 0.82 C 0.21 0.14 0.18 0000 --- --- --- --- 047790 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 048093 00000 ------------ C 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 048545 00000 ------------ A 0.78 0.83 0.81 G 0.22 0.17 0.19 0000 --- --- --- --- 048548 00000 ------------ G 0.89 0.76 0.83 A 0.11 0.24 0.17 0000 --- --- --- --- 048613 00000 ------------ G 0.87 0.85 0.86 A 0.13 0.15 0.14 0000 --- --- --- --- 048662 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 049170 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 055823 00000 ------------ T 0.60 0.88 0.73 C 0.40 0.12 0.27 0000 --- --- --- --- 055969 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 056025 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 056057 00000 ------------ A 0.79 0.95 0.87 G 0.21 0.05 0.13 0000 --- --- --- --- 056374 00000 ------------ T 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 056408 00000 ------------ G 0.61 0.89 0.75 A 0.39 0.11 0.25 0000 --- --- --- --- 056450 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 056503 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 056644 00000 ------------ A 0.65 0.91 0.79 G 0.35 0.09 0.21 0000 --- --- --- --- 057103 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 057160 00000 ------------ A 0.92 0.96 0.94 G 0.08 0.04 0.06 0000 --- --- --- --- 057180 00000 ------------ A 0.92 0.87 0.89 G 0.08 0.13 0.11 0000 --- --- --- --- 057280 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 057298 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 057434 00000 ------------ G 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 058274 00000 ------------ A 0.81 0.97 0.89 G 0.19 0.03 0.11 0000 --- --- --- --- 058300 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 058622 00000 ------------ T 0.88 0.95 0.92 G 0.12 0.05 0.08 0000 --- --- --- --- 058678 00000 ------------ T 1.00 0.93 0.96 C 0.00 0.07 0.04 0000 --- --- --- --- 060535 00000 ------------ T 0.66 0.90 0.77 C 0.34 0.10 0.23 0000 --- --- --- --- 060637 00000 ------------ T 0.70 0.95 0.82 C 0.30 0.05 0.18 0000 --- --- --- --- 060640 00000 ------------ G 0.82 1.00 0.91 A 0.18 0.00 0.09 0000 --- --- --- --- 060650 00000 ------------ C 0.83 0.20 0.52 T 0.17 0.80 0.48 0000 --- --- --- --- 061550 00000 ------------ C 1.00 0.84 0.92 G 0.00 0.16 0.08 0000 --- --- --- --- 061906 00000 ------------ - 0.56 0.91 0.76 + 0.44 0.09 0.24 0000 --- --- --- --- 061915 00000 ------------ T 0.72 0.96 0.84 G 0.28 0.04 0.16 0000 --- --- --- --- 062316 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 062452 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 062598 00000 ------------ C 0.72 0.95 0.83 A 0.28 0.05 0.17 0000 --- --- --- --- 063267 00776 3' UTR G 0.60 0.78 0.69 T 0.40 0.22 0.31 0000 --- --- --- --- 063445 00954 3' UTR G 0.70 0.95 0.83 A 0.30 0.05 0.17 0000 --- --- --- --- 063527 01036 3' UTR C 0.48 0.93 0.70 T 0.52 0.07 0.30 0000 --- --- --- --- 063573 01082 3' UTR A 0.96 0.50 0.73 G 0.04 0.50 0.27 0000 --- --- --- --- 063587 01096 3' UTR G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 063734 01243 3' UTR T 0.81 0.98 0.89 C 0.19 0.02 0.11 0000 --- --- --- --- 065079 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 065126 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 065334 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000889: A 003441: TCTC 013113: GTTT 014547: T 025738: CAGA 027976: GA 028075: G 061906: CATTA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001866 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002659 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002942 00000 ------------ A 0.85 0.65 0.75 G 0.15 0.35 0.25 0000 --- --- --- --- 003297 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003346 00000 ------------ C 0.77 0.89 0.83 A 0.23 0.11 0.17 0000 --- --- --- --- 003470 00000 ------------ G 0.92 0.67 0.80 A 0.08 0.33 0.20 0000 --- --- --- --- 003684 00000 ------------ - 1.00 0.87 0.94 + 0.00 0.13 0.06 0000 --- --- --- --- 003788 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004098 00000 ------------ C 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 004320 00000 ------------ C 0.77 0.89 0.83 T 0.23 0.11 0.17 0000 --- --- --- --- 004673 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 005347 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 006341 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006499 00000 ------------ G 0.60 0.65 0.63 C 0.40 0.35 0.37 0000 --- --- --- --- 008813 00000 ------------ T 0.69 0.89 0.79 G 0.31 0.11 0.21 0000 --- --- --- --- 008853 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008973 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009075 00000 ------------ G 0.77 0.89 0.83 A 0.23 0.11 0.17 0000 --- --- --- --- 009292 -----** NON-SYN G 0.91 1.00 0.96 A 0.09 0.00 0.04 ----*** CGG CAG ARG(R) GLN(Q) 010327 -----** 3' UTR G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 010549 -----** 3' UTR C 1.00 0.89 0.94 G 0.00 0.11 0.06 0000 --- --- --- --- 010906 00000 ------------ G 0.97 0.67 0.81 C 0.03 0.33 0.19 0000 --- --- --- --- *** Sites are not mapped to the complete CDS. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003684: AGGTGGGAATGAGTGTCC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000338 00000 ------------ G 0.52 0.72 0.62 A 0.48 0.28 0.38 0000 --- --- --- --- 000339 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000483 00000 ------------ C 0.46 0.72 0.59 T 0.54 0.28 0.41 0000 --- --- --- --- 001121 00000 ------------ A 0.39 0.89 0.66 G 0.61 0.11 0.34 0000 --- --- --- --- 001926 00084 SYNON C 0.71 0.98 0.84 T 0.29 0.02 0.16 0028 TTC TTT PHE(F) PHE(F) 002713 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 002976 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003051 00000 ------------ A 0.70 0.95 0.83 C 0.30 0.05 0.17 0000 --- --- --- --- 003406 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003874 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003915 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004129 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004138 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005466 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006297 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006364 00000 ------------ G 0.84 0.48 0.66 A 0.16 0.52 0.34 0000 --- --- --- --- 007025 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 007242 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 008395 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 008477 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008667 00000 ------------ C 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 009100 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 009107 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009134 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009184 00000 ------------ - 0.15 0.02 0.09 + 0.85 0.98 0.91 0000 --- --- --- --- 009211 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009629 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 009755 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 009914 00000 ------------ T 0.85 0.95 0.90 G 0.15 0.05 0.10 0000 --- --- --- --- 010262 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 010289 00700 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0234 GAG AAG GLU(E) LYS(K) 010298 00709 SYNON T 0.96 1.00 0.98 C 0.04 0.00 0.02 0237 TTG CTG LEU(L) LEU(L) 010792 00000 ------------ T 0.40 0.96 0.67 C 0.60 0.04 0.33 0000 --- --- --- --- 010793 00000 ------------ C 0.40 0.96 0.67 T 0.60 0.04 0.33 0000 --- --- --- --- 010843 00000 ------------ - 0.83 0.96 0.89 + 0.17 0.04 0.11 0000 --- --- --- --- 010885 00000 ------------ T 0.26 0.96 0.61 C 0.74 0.04 0.39 0000 --- --- --- --- 011009 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011010 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011099 00000 ------------ - 0.38 0.96 0.66 + 0.62 0.04 0.34 0000 --- --- --- --- 011274 00000 ------------ T 0.26 0.93 0.60 C 0.74 0.07 0.40 0000 --- --- --- --- 011422 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011641 00000 ------------ C 0.28 0.93 0.63 G 0.72 0.07 0.37 0000 --- --- --- --- 011705 00000 ------------ T 0.28 0.93 0.63 C 0.72 0.07 0.37 0000 --- --- --- --- 011738 00000 ------------ G 0.28 0.96 0.64 C 0.72 0.04 0.36 0000 --- --- --- --- 011791 00000 ------------ G 0.26 0.96 0.64 C 0.74 0.04 0.36 0000 --- --- --- --- 012023 00000 ------------ T 0.69 1.00 0.85 C 0.31 0.00 0.15 0000 --- --- --- --- 012058 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 012083 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012131 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 012173 00000 ------------ C 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 012300 00000 ------------ A 0.25 0.91 0.59 G 0.75 0.09 0.41 0000 --- --- --- --- 012384 00000 ------------ C 0.73 1.00 0.86 T 0.27 0.00 0.14 0000 --- --- --- --- 012432 00000 ------------ - 0.43 0.02 0.23 + 0.57 0.98 0.77 0000 --- --- --- --- 012749 00000 ------------ G 0.52 0.76 0.64 A 0.48 0.24 0.36 0000 --- --- --- --- 012777 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012780* 012800 00000 ------------ A 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 012809 00000 ------------ T 0.75 0.96 0.86 C 0.25 0.04 0.14 0000 --- --- --- --- 012818 00000 ------------ A 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 012824 00000 ------------ - 0.41 0.07 0.23 + 0.59 0.93 0.77 0000 --- --- --- --- 012837 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 012838 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 012982 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 013314 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013315 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013343 00000 ------------ C 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 013373 00000 ------------ C 0.70 1.00 0.85 T 0.30 0.00 0.15 0000 --- --- --- --- 013403 00000 ------------ C 0.67 0.98 0.82 T 0.33 0.02 0.18 0000 --- --- --- --- 013525 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013651 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013726 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 013773 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015488 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 015560 00000 ------------ C 0.70 0.98 0.83 T 0.30 0.02 0.17 0000 --- --- --- --- 015598 00000 ------------ - 0.30 0.02 0.17 + 0.70 0.98 0.83 0000 --- --- --- --- 020070 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 020174 00000 ------------ T 0.68 0.98 0.83 G 0.32 0.02 0.17 0000 --- --- --- --- 020325 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020406 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020682 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 020824 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 020989 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 021057 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 021199 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021370 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021436 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021525 00000 ------------ T 0.62 0.98 0.80 C 0.38 0.02 0.20 0000 --- --- --- --- 021579 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 021584 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 021587 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 021827 00000 ------------ T 0.64 0.98 0.82 C 0.36 0.02 0.18 0000 --- --- --- --- 021903 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 021927 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021988 00000 ------------ C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 022021 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 022191 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022192 00000 ------------ A 0.63 0.98 0.80 G 0.37 0.02 0.20 0000 --- --- --- --- 022498 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 022652 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023085 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 023149 00000 ------------ A 0.50 0.95 0.73 G 0.50 0.05 0.27 0000 --- --- --- --- 023167 00000 ------------ G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 023184 00000 ------------ - 0.29 0.03 0.15 + 0.71 0.97 0.85 0000 --- --- --- --- 023724 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 024678 00000 ------------ C 0.67 0.97 0.80 T 0.33 0.03 0.20 0000 --- --- --- --- 025237 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 025753 00000 ------------ - 0.33 0.02 0.17 + 0.67 0.98 0.83 0000 --- --- --- --- 026349 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026452 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 026470 00000 ------------ C 0.70 0.98 0.84 G 0.30 0.02 0.16 0000 --- --- --- --- 026630 00000 ------------ - 0.71 0.97 0.84 + 0.29 0.03 0.16 0000 --- --- --- --- 027056 00000 ------------ T 0.90 1.00 0.94 C 0.10 0.00 0.06 0000 --- --- --- --- 027215 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 027656 00000 ------------ - 0.14 0.00 0.07 + 0.86 1.00 0.93 0000 --- --- --- --- 027796 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 028899 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 028931* 029012 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 029013 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 029492 00000 ------------ C 0.92 0.78 0.85 T 0.08 0.22 0.15 0000 --- --- --- --- 029667 00000 ------------ G 0.64 0.98 0.81 A 0.36 0.02 0.19 0000 --- --- --- --- 029916 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 030167 00000 ------------ C 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 030318 00000 ------------ T 0.74 0.98 0.86 C 0.26 0.02 0.14 0000 --- --- --- --- 030421 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 031493 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031632 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032836 00000 ------------ T 0.74 1.00 0.89 C 0.26 0.00 0.11 0000 --- --- --- --- 033084 00000 ------------ G 0.97 0.89 0.93 A 0.03 0.11 0.07 0000 --- --- --- --- 033250 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 033371 00000 ------------ T 0.42 0.98 0.73 C 0.58 0.02 0.27 0000 --- --- --- --- 033703 00000 ------------ G 0.73 0.98 0.89 A 0.27 0.02 0.11 0000 --- --- --- --- 033925 00000 ------------ A 0.86 1.00 0.93 G 0.14 0.00 0.07 0000 --- --- --- --- 034159 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 034208 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 034537 00000 ------------ G 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 034731 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 034816 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034891 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 034909 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 035139 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 035446 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 035654 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 035655 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 036733 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 036752 00000 ------------ C 0.84 0.45 0.65 T 0.16 0.55 0.35 0000 --- --- --- --- 036852 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 037972 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038475 02122 3' UTR T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038966 02613 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 038967 02614 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 039196 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039253 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 039308 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039437 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 039743 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 039756 00000 ------------ G 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 039788 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 040077 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 040322 00000 ------------ C 0.61 0.98 0.79 T 0.39 0.02 0.21 0000 --- --- --- --- 040638 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 009184: CTC 010843: TA 011099: AGAAAGTATTT 012432: G 012824: C 015488: ACAA 015598: A 020989: T 021903: GTTTTGTTTT 023184: TGAATGAGAC 025753: GGATTACAGGCGTG 026630: T 027656: AG 029916: CT 034731: CA 036733: AGG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 012780 C 0.48 0.98 0.73 G 0.36 0.02 0.19 T 0.17 0.00 0.08 028931 C 0.07 0.00 0.03 G 0.11 0.00 0.05 T 0.83 1.00 0.91 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000107 00000 ------------ A 0.86 0.80 0.83 G 0.14 0.20 0.17 0000 --- --- --- --- 000291 00000 ------------ T 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 000305 00000 ------------ C 0.90 0.80 0.85 T 0.10 0.20 0.15 0000 --- --- --- --- 000334 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000604 00000 ------------ C 0.75 0.93 0.84 T 0.25 0.07 0.16 0000 --- --- --- --- 000609 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000678 00000 ------------ T 0.93 0.80 0.86 G 0.07 0.20 0.14 0000 --- --- --- --- 001051 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001054 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001072 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 001280 00000 ------------ C 0.72 0.82 0.77 A 0.28 0.18 0.23 0000 --- --- --- --- 001537 00000 ------------ A 0.85 0.85 0.85 G 0.15 0.15 0.15 0000 --- --- --- --- 001548 00000 ------------ G 0.97 0.86 0.92 A 0.03 0.14 0.08 0000 --- --- --- --- 001563 00000 ------------ T 0.93 0.98 0.96 G 0.07 0.02 0.04 0000 --- --- --- --- 001707 00000 ------------ G 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 001729 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001980 00000 ------------ A 0.93 0.80 0.87 T 0.07 0.20 0.13 0000 --- --- --- --- 001984 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002307 00000 ------------ A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 002391 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002569 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 003001 00000 ------------ T 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 003190 00000 ------------ G 0.95 0.77 0.86 C 0.05 0.23 0.14 0000 --- --- --- --- 003719 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003756 00000 ------------ G 0.70 0.80 0.75 C 0.30 0.20 0.25 0000 --- --- --- --- 004748 00000 ------------ - 0.30 0.20 0.26 + 0.70 0.80 0.74 0000 --- --- --- --- 004881 00000 ------------ C 0.94 0.78 0.86 G 0.06 0.22 0.14 0000 --- --- --- --- 005018 00158 SYNON T 0.33 0.74 0.53 C 0.67 0.26 0.47 0035 TGT TGC CYS(C) CYS(C) 005132 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005660 00418 3' UTR C 0.83 0.80 0.82 T 0.17 0.20 0.18 0000 --- --- --- --- 006184 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006518 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 006531 00000 ------------ G 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 007436 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 007605 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007614 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007659 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007710 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 007843 00000 ------------ T 0.78 0.59 0.69 C 0.22 0.41 0.31 0000 --- --- --- --- 008072 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008597 00000 ------------ G 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 008775 00000 ------------ C 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 008980 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008989 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 009063 00000 ------------ A 0.67 0.52 0.60 G 0.33 0.48 0.40 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004748: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000086 00000 ------------ G 0.98 0.94 0.96 A 0.02 0.06 0.04 0000 --- --- --- --- 000135 00000 ------------ A 0.79 0.74 0.77 G 0.21 0.26 0.23 0000 --- --- --- --- 000194 00000 ------------ G 0.92 0.61 0.78 C 0.08 0.39 0.22 0000 --- --- --- --- 000261 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000413 00000 ------------ A 0.98 0.90 0.95 G 0.02 0.10 0.05 0000 --- --- --- --- 000670 00000 ------------ G 0.96 0.95 0.96 A 0.04 0.05 0.04 0000 --- --- --- --- 000758 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001131 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001169 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001279 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 001564 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 001586 00018 5' UTR A 0.98 0.95 0.97 G 0.02 0.05 0.03 0000 --- --- --- --- 001730 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001774 00000 ------------ A 0.52 0.83 0.68 G 0.48 0.17 0.32 0000 --- --- --- --- 001849 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 001976 00098 5' UTR G 0.98 0.90 0.94 T 0.02 0.10 0.06 0000 --- --- --- --- 002043 00000 ------------ C 0.62 0.86 0.74 T 0.38 0.14 0.26 0000 --- --- --- --- 002131 00000 ------------ C 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 002161 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 002238 00000 ------------ + 0.00 0.09 0.04 - 1.00 0.91 0.96 0000 --- --- --- --- 002239 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002248 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 002272 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002408 00000 ------------ G 0.48 0.83 0.65 A 0.52 0.17 0.35 0000 --- --- --- --- 002414 00000 ------------ T 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 002471 00000 ------------ T 0.58 0.83 0.70 C 0.42 0.17 0.30 0000 --- --- --- --- 002633 00177 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0021 GCC TCC ALA(A) SER(S) 002665 00209 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0031 ATG ATT MET(M) ILE(I) 002845 00389 SYNON A 0.98 0.89 0.94 G 0.02 0.11 0.06 0091 ACA ACG THR(T) THR(T) 002848 00392 SYNON A 0.98 0.89 0.94 G 0.02 0.11 0.06 0092 GAA GAG GLU(E) GLU(E) 003183 00000 ------------ + 0.78 0.97 0.86 - 0.22 0.03 0.14 0000 --- --- --- --- 003641 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 003689 00561 NON-SYN A 0.98 0.91 0.95 C 0.02 0.09 0.05 0149 AGT CGT SER(S) ARG(R) 003788 00000 ------------ T 0.98 0.91 0.95 C 0.02 0.09 0.05 0000 --- --- --- --- 003896 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003993 00000 ------------ T 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 004247 00000 ------------ G 0.92 0.72 0.82 A 0.08 0.28 0.18 0000 --- --- --- --- 004464 00000 ------------ T 0.40 0.82 0.59 C 0.60 0.17 0.41 0000 --- --- --- --- 004503 00000 ------------ + 0.70 0.44 0.59 - 0.30 0.56 0.41 0000 --- --- --- --- 004594 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 004611 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004670 00000 ------------ + 0.98 0.89 0.94 - 0.02 0.11 0.06 0000 --- --- --- --- 004687 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 004920 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004930 00000 ------------ C 0.73 0.57 0.66 T 0.27 0.42 0.34 0000 --- --- --- --- 004970 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005668 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 005828 00000 ------------ G 0.75 0.54 0.65 A 0.25 0.46 0.35 0000 --- --- --- --- 005924 00000 ------------ C 0.92 0.65 0.79 A 0.08 0.35 0.21 0000 --- --- --- --- 005960 00857 SYNON T 0.98 0.89 0.94 C 0.02 0.11 0.06 0247 AAT AAC ASN(N) ASN(N) 005989 00886 NON-SYN A 0.96 1.00 0.98 C 0.04 0.00 0.02 0257 CAA CCA GLN(Q) PRO(P) 006092 00989 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0291 AAT AAC ASN(N) ASN(N) 006102 00999 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0295 GAG AAG GLU(E) LYS(K) 006219 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006747 00000 ------------ A 0.61 0.93 0.77 G 0.39 0.07 0.23 0000 --- --- --- --- 007003 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007158 00000 ------------ A 0.58 0.93 0.76 G 0.42 0.07 0.24 0000 --- --- --- --- 007305 00000 ------------ G 0.58 0.93 0.76 A 0.42 0.07 0.24 0000 --- --- --- --- 007532 01377 NON-SYN G 0.96 1.00 0.98 C 0.04 0.00 0.02 0421 GAG CAG GLU(E) GLN(Q) 007583 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 007632 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 007673 00000 ------------ T 0.98 0.88 0.93 C 0.02 0.12 0.07 0000 --- --- --- --- 007803 01518 NON-SYN C 0.83 0.98 0.90 T 0.17 0.02 0.10 0468 CAT TAT HIS(H) TYR(Y) 007995 00000 ------------ T 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 008517 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 008716 00000 ------------ T 0.98 0.88 0.93 C 0.02 0.12 0.07 0000 --- --- --- --- 008765 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 008804 01764 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0550 CCC TCC PRO(P) SER(S) 008879 01839 NON-SYN C 1.00 0.95 0.98 T 0.00 0.05 0.02 0575 CTC TTC LEU(L) PHE(F) 008934 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009187 00000 ------------ C 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 009225 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009258 00000 ------------ A 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 009368 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009639 00000 ------------ A 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 009831 01916 SYNON T 0.83 0.98 0.90 C 0.17 0.02 0.10 0600 GAT GAC ASP(D) ASP(D) 010024 00000 ------------ + 0.98 0.91 0.95 - 0.02 0.09 0.05 0000 --- --- --- --- 010054 00000 ------------ A 0.87 0.55 0.73 G 0.13 0.45 0.27 0000 --- --- --- --- 010087 00000 ------------ T 0.67 0.97 0.81 A 0.33 0.03 0.19 0000 --- --- --- --- 010130 00000 ------------ T 0.46 0.97 0.69 C 0.54 0.03 0.31 0000 --- --- --- --- 010728 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 010899 00000 ------------ C 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 011028 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011029 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012037 02903 3' UTR T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 012228 03094 3' UTR A 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 012618 03484 3' UTR A 0.40 0.83 0.62 G 0.60 0.17 0.38 0000 --- --- --- --- 012629 03495 3' UTR C 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 013014 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 013083 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 013249 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 013252 00000 ------------ G 0.44 0.85 0.64 C 0.56 0.15 0.36 0000 --- --- --- --- 013311 00000 ------------ T 0.90 0.64 0.77 C 0.10 0.36 0.23 0000 --- --- --- --- 013432 00000 ------------ + 0.69 0.93 0.80 - 0.31 0.07 0.20 0000 --- --- --- --- 013434 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 013435 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 013529 00000 ------------ C 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 013531 00000 ------------ C 0.57 0.85 0.71 T 0.43 0.15 0.29 0000 --- --- --- --- 013571 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002238: A 003183: AC 004503: CA 004670: T 010024: TTA 013432: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000084 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 000118 00000 ------------ T 0.67 0.93 0.79 C 0.33 0.07 0.21 0000 --- --- --- --- 000137 00000 ------------ G 0.98 0.91 0.95 T 0.02 0.09 0.05 0000 --- --- --- --- 000161 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 000210 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000297 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 000658 00000 ------------ T 0.44 0.83 0.63 C 0.56 0.17 0.37 0000 --- --- --- --- 000741 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 001221 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001292 00000 ------------ A 0.67 0.93 0.79 G 0.33 0.07 0.21 0000 --- --- --- --- 002149 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 002414 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 002476 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 002575 00000 ------------ C 0.97 0.88 0.93 T 0.03 0.12 0.07 0000 --- --- --- --- 002671 00000 ------------ A 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 002740 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 002877 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003053 00154 SYNON G 0.95 1.00 0.98 T 0.05 0.00 0.02 0022 GGG GGT GLY(G) GLY(G) 003096 00000 ------------ G 0.88 0.76 0.82 A 0.12 0.24 0.18 0000 --- --- --- --- 003177 00000 ------------ - 0.60 0.83 0.72 + 0.40 0.17 0.28 0000 --- --- --- --- 003293 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003472 00000 ------------ G 0.43 0.83 0.63 C 0.57 0.17 0.37 0000 --- --- --- --- 003950 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004318 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 004348 00000 ------------ G 0.52 0.83 0.67 T 0.48 0.17 0.33 0000 --- --- --- --- 004627 00000 ------------ A 0.59 0.83 0.71 G 0.41 0.17 0.29 0000 --- --- --- --- 004873 00340 SYNON T 1.00 0.98 0.99 C 0.00 0.02 0.01 0084 CGT CGC ARG(R) ARG(R) 004942 00409 SYNON T 0.65 0.83 0.73 C 0.35 0.17 0.27 0107 CTT CTC LEU(L) LEU(L) 004972 00439 SYNON T 0.94 1.00 0.97 C 0.06 0.00 0.03 0117 GGT GGC GLY(G) GLY(G) 005105 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005144 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005286 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005337 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005358 00000 ------------ G 0.65 0.83 0.73 A 0.35 0.17 0.27 0000 --- --- --- --- 005531 00000 ------------ A 0.67 0.93 0.80 G 0.33 0.07 0.20 0000 --- --- --- --- 005566 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005651 00000 ------------ C 0.65 0.83 0.73 T 0.35 0.17 0.27 0000 --- --- --- --- 005809 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 005818 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005896 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006165 00665 NON-SYN T 0.81 0.74 0.78 C 0.19 0.26 0.22 0193 TTT CTT PHE(F) LEU(L) 006313 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006330 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006358 00000 ------------ T 0.92 0.72 0.82 C 0.08 0.28 0.18 0000 --- --- --- --- 006428 00000 ------------ C 0.65 0.83 0.73 A 0.35 0.17 0.27 0000 --- --- --- --- 006719 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006736 00000 ------------ T 0.67 0.93 0.80 C 0.33 0.07 0.20 0000 --- --- --- --- 006944 00000 ------------ A 0.65 0.83 0.73 T 0.35 0.17 0.27 0000 --- --- --- --- 007302 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 007418 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007441 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 007668 00000 ------------ C 0.98 0.89 0.94 T 0.02 0.11 0.06 0000 --- --- --- --- 007830 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 008061 00000 ------------ T 0.67 0.93 0.80 C 0.33 0.07 0.20 0000 --- --- --- --- 008090 00000 ------------ T 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 008106 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 008206 00000 ------------ G 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 008248 00000 ------------ C 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 008535 00000 ------------ G 0.98 0.89 0.94 C 0.02 0.11 0.06 0000 --- --- --- --- 008777 00689 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0201 GAG CAG GLU(E) GLN(Q) 008813 00725 NON-SYN C 0.67 0.93 0.80 T 0.33 0.07 0.20 0213 CCT TCT PRO(P) SER(S) 009100 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 009389 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010291 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010308 00000 ------------ G 0.67 0.98 0.83 A 0.33 0.02 0.17 0000 --- --- --- --- 010550 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 010726 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 010863 00000 ------------ C 0.98 0.89 0.94 T 0.02 0.11 0.06 0000 --- --- --- --- 011173 00000 ------------ A 0.54 0.83 0.68 C 0.46 0.17 0.32 0000 --- --- --- --- 011196 00000 ------------ - 0.35 0.02 0.19 + 0.65 0.98 0.81 0000 --- --- --- --- 011238 00000 ------------ T 0.65 0.98 0.81 C 0.35 0.02 0.19 0000 --- --- --- --- 011265 00000 ------------ A 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 011313 00000 ------------ - 0.35 0.02 0.19 + 0.65 0.98 0.81 0000 --- --- --- --- 011324 00000 ------------ G 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 011374 00000 ------------ C 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 011414 00000 ------------ T 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 011434 00000 ------------ A 0.98 0.89 0.94 C 0.02 0.11 0.06 0000 --- --- --- --- 011503 00000 ------------ T 0.69 0.98 0.83 A 0.31 0.02 0.17 0000 --- --- --- --- 011534 00000 ------------ C 0.69 0.98 0.83 T 0.31 0.02 0.17 0000 --- --- --- --- 011563 00000 ------------ T 0.69 0.98 0.83 G 0.31 0.02 0.17 0000 --- --- --- --- 011710 00000 ------------ A 0.98 0.89 0.94 T 0.02 0.11 0.06 0000 --- --- --- --- 011711 00000 ------------ A 0.98 0.89 0.94 T 0.02 0.11 0.06 0000 --- --- --- --- 011783 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 012195 00000 ------------ G 0.69 0.98 0.83 A 0.31 0.02 0.17 0000 --- --- --- --- 012418 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012488 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012736 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 012919 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 012945 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013081 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013131 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013247 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013249 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013308 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013403 00000 ------------ G 0.76 1.00 0.87 A 0.24 0.00 0.13 0000 --- --- --- --- 013493 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 013508 00000 ------------ G 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 013599 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013631 00000 ------------ T 0.89 0.61 0.74 C 0.11 0.39 0.26 0000 --- --- --- --- 013636 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 013704 00000 ------------ A 0.63 1.00 0.82 G 0.37 0.00 0.18 0000 --- --- --- --- 013795 00000 ------------ A 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 014041 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014043 00000 ------------ T 0.98 0.89 0.93 C 0.02 0.11 0.07 0000 --- --- --- --- 014061 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 014089 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 014203 00000 ------------ G 0.96 0.96 0.96 C 0.04 0.04 0.04 0000 --- --- --- --- 014517 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014582 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014672 00000 ------------ A 0.65 0.83 0.73 G 0.35 0.17 0.27 0000 --- --- --- --- 014730 00000 ------------ A 0.65 0.83 0.73 G 0.35 0.17 0.27 0000 --- --- --- --- 015296 00000 ------------ A 0.54 0.57 0.56 T 0.46 0.43 0.44 0000 --- --- --- --- 015640 00000 ------------ C 0.75 0.95 0.84 A 0.25 0.05 0.16 0000 --- --- --- --- 015664 00000 ------------ C 0.44 0.72 0.57 T 0.56 0.28 0.43 0000 --- --- --- --- 015780 00000 ------------ G 0.73 0.78 0.76 T 0.27 0.22 0.24 0000 --- --- --- --- 016054 00000 ------------ T 0.73 0.78 0.76 A 0.27 0.22 0.24 0000 --- --- --- --- 016063 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 016190 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016511 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 016908 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017019 00000 ------------ A 0.44 0.72 0.57 G 0.56 0.28 0.43 0000 --- --- --- --- 017100 00000 ------------ C 0.73 0.78 0.76 A 0.27 0.22 0.24 0000 --- --- --- --- 017325 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 017784 00000 ------------ T 0.41 0.72 0.57 C 0.59 0.28 0.43 0000 --- --- --- --- 017986 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 018269 00000 ------------ C 0.71 0.96 0.83 G 0.29 0.04 0.17 0000 --- --- --- --- 018303 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018336 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018713 00000 ------------ C 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 019208 00000 ------------ T 0.74 0.95 0.83 A 0.26 0.05 0.17 0000 --- --- --- --- 019262 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019273 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 019457 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 019572 00000 ------------ C 0.89 0.87 0.88 A 0.11 0.13 0.12 0000 --- --- --- --- 019673 00000 ------------ T 0.44 0.67 0.55 C 0.56 0.33 0.45 0000 --- --- --- --- 019781 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 019876 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019909 00000 ------------ C 0.44 0.67 0.55 A 0.56 0.33 0.45 0000 --- --- --- --- 020126 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020202 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020210 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 020243 00000 ------------ - 0.05 0.13 0.09 + 0.95 0.87 0.91 0000 --- --- --- --- 020715 00000 ------------ G 0.71 0.96 0.83 A 0.29 0.04 0.17 0000 --- --- --- --- 021012 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021096 00000 ------------ T 0.98 0.89 0.93 A 0.02 0.11 0.07 0000 --- --- --- --- 021150 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 021151 00000 ------------ G 0.95 0.96 0.96 A 0.05 0.04 0.04 0000 --- --- --- --- 021162 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 021318 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021352 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 021382 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021471 00000 ------------ G 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 021712 01193 NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 0369 AAT GAT ASN(N) ASP(D) 021870 01351 3' UTR T 0.69 0.73 0.71 C 0.31 0.27 0.29 0000 --- --- --- --- 021986 01467 3' UTR T 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 022292 01773 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022366 01847 3' UTR - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 022653 02134 3' UTR C 0.52 0.59 0.55 A 0.48 0.41 0.45 0000 --- --- --- --- 022876 00000 ------------ - 0.52 0.59 0.55 + 0.48 0.41 0.45 0000 --- --- --- --- 023230 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023370 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 023404 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 023518 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 023613 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023728 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 024070 00000 ------------ C 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 024147 00000 ------------ T 0.56 0.83 0.69 A 0.44 0.17 0.31 0000 --- --- --- --- 024330 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024467 00000 ------------ T 0.73 0.52 0.63 C 0.27 0.48 0.37 0000 --- --- --- --- 024514 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024703 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003177: AG 009100: T 011196: TT 011313: T 016063: AGTTA 020243: T 022366: AGTT 022876: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000126 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000178 00000 ------------ C 0.56 0.50 0.53 G 0.44 0.50 0.47 0000 --- --- --- --- 000273 00000 ------------ C 0.50 0.54 0.52 T 0.50 0.46 0.48 0000 --- --- --- --- 000329 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000332 00000 ------------ G 0.85 0.65 0.76 A 0.15 0.35 0.24 0000 --- --- --- --- 000484 00000 ------------ T 0.96 0.91 0.94 C 0.04 0.09 0.06 0000 --- --- --- --- 000725 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000837 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001381 00000 ------------ A 0.66 0.90 0.78 G 0.34 0.10 0.22 0000 --- --- --- --- 001551 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 001947 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002072 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002348 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002359 00000 ------------ G 0.50 0.50 0.50 A 0.50 0.50 0.50 0000 --- --- --- --- 002618 00000 ------------ C 0.84 0.62 0.74 G 0.16 0.38 0.26 0000 --- --- --- --- 002749 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002871 00000 ------------ C 0.96 0.90 0.93 T 0.04 0.10 0.07 0000 --- --- --- --- 003083 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003309 00000 ------------ T 1.00 0.96 0.97 C 0.00 0.04 0.03 0000 --- --- --- --- 003326 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003467 00000 ------------ - 0.06 0.00 0.02 + 0.94 1.00 0.98 0000 --- --- --- --- 003645 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 004346 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 004375 00000 ------------ T 0.63 0.50 0.57 A 0.37 0.50 0.43 0000 --- --- --- --- 004381 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004509 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 004554 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 005152 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 005300 00000 ------------ A 0.57 0.55 0.56 T 0.42 0.45 0.44 0000 --- --- --- --- 005520 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005595 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006166 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006360 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007603 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007877 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007933 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008500 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 008626 00000 ------------ G 0.54 0.52 0.53 T 0.46 0.48 0.47 0000 --- --- --- --- 008632 00000 ------------ T 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 008759 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008988 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009101 00000 ------------ C 0.95 0.95 0.95 A 0.05 0.05 0.05 0000 --- --- --- --- 009102 00000 ------------ T 0.95 0.95 0.95 G 0.05 0.05 0.05 0000 --- --- --- --- 009213 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009406 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009719 00000 ------------ G 0.95 0.70 0.83 T 0.05 0.30 0.17 0000 --- --- --- --- 009761 00000 ------------ A 0.50 0.50 0.50 G 0.50 0.50 0.50 0000 --- --- --- --- 009785 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009911 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 010066 00000 ------------ T 0.85 0.63 0.74 G 0.15 0.37 0.26 0000 --- --- --- --- 010241 00000 ------------ G 0.52 0.52 0.52 A 0.48 0.48 0.48 0000 --- --- --- --- 010281 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 010303 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010450 00000 ------------ A 0.70 0.86 0.78 G 0.30 0.14 0.22 0000 --- --- --- --- 010521 00000 ------------ T 0.94 0.70 0.83 C 0.06 0.30 0.17 0000 --- --- --- --- 010534 00000 ------------ G 0.54 0.48 0.51 A 0.46 0.52 0.49 0000 --- --- --- --- 010652 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010703 00000 ------------ A 0.96 0.70 0.83 G 0.04 0.30 0.17 0000 --- --- --- --- 010820 00000 ------------ C 0.83 0.68 0.76 T 0.17 0.32 0.24 0000 --- --- --- --- 012229 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012244 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 012305 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 012399 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013260 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013393 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013467 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013497 00000 ------------ T 0.52 0.50 0.51 C 0.48 0.50 0.49 0000 --- --- --- --- 013511 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 013680 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013911 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014105 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 014419 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 014582 00000 ------------ T 0.52 0.80 0.65 C 0.48 0.20 0.35 0000 --- --- --- --- 014668 00000 ------------ A 0.88 0.87 0.87 G 0.12 0.13 0.13 0000 --- --- --- --- 014681 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 014945 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 015284 00512 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0139 CCG CCA PRO(P) PRO(P) 016064 00000 ------------ C 0.93 0.98 0.96 G 0.07 0.02 0.04 0000 --- --- --- --- 016186 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016469 00000 ------------ T 0.85 0.98 0.92 G 0.15 0.02 0.08 0000 --- --- --- --- 016650 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 017069 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 017093 00000 ------------ A 0.93 0.72 0.83 G 0.07 0.28 0.17 0000 --- --- --- --- 017400 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017418 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017618 00000 ------------ C 0.68 0.62 0.65 T 0.32 0.38 0.35 0000 --- --- --- --- 017738 00000 ------------ - 1.00 0.93 0.97 + 0.00 0.07 0.03 0000 --- --- --- --- 017808 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018059 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 018069 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 018186 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 018305 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- 018404 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 018418 00000 ------------ A 0.88 0.98 0.93 G 0.12 0.02 0.07 0000 --- --- --- --- 018737 00630 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0179 GGG AGG GLY(G) ARG(R) 018888 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018986 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 019214 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 019298 00720 NON-SYN G 0.95 0.98 0.97 A 0.05 0.02 0.03 0209 GTG ATG VAL(V) MET(M) 019362 00784 NON-SYN G 1.00 0.98 0.99 T 0.00 0.02 0.01 0230 TGC TTC CYS(C) PHE(F) 019483 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019536 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020020 00916 NON-SYN C 0.91 1.00 0.95 T 0.09 0.00 0.05 0274 ACC ATC THR(T) ILE(I) 020251 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020325 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 020357 00000 ------------ T 0.79 0.70 0.74 C 0.21 0.30 0.26 0000 --- --- --- --- 020387 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 020485 00000 ------------ C 0.96 0.89 0.93 T 0.04 0.11 0.07 0000 --- --- --- --- 020643 00000 ------------ - 0.50 0.59 0.54 + 0.50 0.41 0.46 0000 --- --- --- --- 020732 01087 NON-SYN G 0.75 0.87 0.81 A 0.25 0.13 0.19 0331 AGT AAT SER(S) ASN(N) 020900 00000 ------------ A 0.90 0.72 0.81 G 0.10 0.28 0.19 0000 --- --- --- --- 020946 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021107 00000 ------------ G 0.89 0.73 0.81 A 0.11 0.27 0.19 0000 --- --- --- --- 021154 00000 ------------ C 0.95 0.73 0.84 T 0.05 0.27 0.16 0000 --- --- --- --- 021327 00000 ------------ G 0.50 0.61 0.55 A 0.50 0.39 0.45 0000 --- --- --- --- 021621 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021795 00000 ------------ C 0.61 0.70 0.65 A 0.39 0.30 0.35 0000 --- --- --- --- 021864 00000 ------------ C 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 021972 00000 ------------ G 0.60 0.70 0.65 A 0.40 0.30 0.35 0000 --- --- --- --- 022047 00000 ------------ T 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 022082 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022239 00000 ------------ A 0.75 0.70 0.73 G 0.25 0.30 0.27 0000 --- --- --- --- 022351 00000 ------------ C 0.65 0.84 0.74 T 0.35 0.16 0.26 0000 --- --- --- --- 022431 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 022696 01249 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0385 TCG TTG SER(S) LEU(L) 023031 00000 ------------ C 0.95 0.75 0.85 T 0.05 0.25 0.15 0000 --- --- --- --- 023202 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 023368 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 023488 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023627 00000 ------------ C 0.89 0.86 0.88 T 0.11 0.14 0.12 0000 --- --- --- --- 023909 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024099 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 024146 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024284 00000 ------------ T 0.70 0.50 0.60 C 0.30 0.50 0.40 0000 --- --- --- --- 024310 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024628 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 024864 00000 ------------ C 0.91 0.54 0.73 A 0.09 0.46 0.27 0000 --- --- --- --- 024950 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 025049 00000 ------------ C 0.83 0.52 0.68 T 0.17 0.48 0.32 0000 --- --- --- --- 025487 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025610 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 025966 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 026084 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026155 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026313 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026397 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 026449 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 026536 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026560 00000 ------------ C 0.89 0.54 0.71 A 0.11 0.46 0.29 0000 --- --- --- --- 026730 00000 ------------ G 0.89 0.54 0.71 A 0.11 0.46 0.29 0000 --- --- --- --- 026888 00000 ------------ C 0.53 0.65 0.59 A 0.47 0.35 0.41 0000 --- --- --- --- 026893 00000 ------------ C 0.77 0.83 0.80 A 0.23 0.17 0.20 0000 --- --- --- --- 026959 00000 ------------ - 0.55 0.33 0.43 + 0.45 0.67 0.57 0000 --- --- --- --- 027356 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027451 00000 ------------ T 0.77 0.52 0.65 A 0.23 0.48 0.35 0000 --- --- --- --- 027964 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028018 00000 ------------ T 0.56 0.68 0.62 C 0.44 0.32 0.38 0000 --- --- --- --- 028051 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 028070 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 028670 00000 ------------ A 0.75 0.50 0.62 C 0.25 0.50 0.38 0000 --- --- --- --- 028972 00000 ------------ G 0.73 0.54 0.63 A 0.27 0.46 0.37 0000 --- --- --- --- 029278 01719 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0542 GAG AAG GLU(E) LYS(K) 029444 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029895 00000 ------------ A 0.54 0.96 0.74 T 0.46 0.04 0.26 0000 --- --- --- --- 030120 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030490 00000 ------------ - 0.69 0.48 0.58 + 0.31 0.52 0.42 0000 --- --- --- --- 030533 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030548 00000 ------------ A 0.76 0.48 0.62 G 0.24 0.52 0.38 0000 --- --- --- --- 030562 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030605 00000 ------------ A 0.91 0.54 0.73 G 0.09 0.46 0.27 0000 --- --- --- --- 030723 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 030776 00000 ------------ C 0.54 0.96 0.74 T 0.46 0.04 0.26 0000 --- --- --- --- 031387 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 031706 00000 ------------ T 0.88 0.55 0.71 A 0.12 0.45 0.29 0000 --- --- --- --- 031891 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 032031 00000 ------------ A 0.73 0.50 0.62 G 0.27 0.50 0.38 0000 --- --- --- --- 032143 00000 ------------ G 0.78 0.50 0.64 T 0.23 0.50 0.36 0000 --- --- --- --- 032149 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 032150 00000 ------------ - 0.30 0.50 0.40 + 0.70 0.50 0.60 0000 --- --- --- --- 032180 00000 ------------ T 0.83 0.50 0.67 C 0.17 0.50 0.33 0000 --- --- --- --- 032340 00000 ------------ G 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 032667 00000 ------------ G 0.98 0.95 0.96 A 0.02 0.05 0.04 0000 --- --- --- --- 032906 00000 ------------ A 0.98 0.95 0.96 G 0.02 0.05 0.04 0000 --- --- --- --- 032927 00000 ------------ C 0.67 0.45 0.56 A 0.33 0.55 0.44 0000 --- --- --- --- 032979 00000 ------------ A 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 033155 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 033202 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 033721 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 033793 00000 ------------ G 0.46 0.91 0.68 T 0.54 0.09 0.32 0000 --- --- --- --- 034080 00000 ------------ G 0.93 0.96 0.95 T 0.07 0.04 0.05 0000 --- --- --- --- 034109 00000 ------------ A 0.93 0.57 0.76 T 0.07 0.43 0.24 0000 --- --- --- --- 034112 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 034186 00000 ------------ A 0.47 0.95 0.73 G 0.53 0.05 0.27 0000 --- --- --- --- 034327 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034418 00000 ------------ G 0.54 0.96 0.74 A 0.46 0.04 0.26 0000 --- --- --- --- 034502 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 034505 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 034535 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 034537 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 034541 00000 ------------ A 0.44 0.91 0.67 G 0.56 0.09 0.33 0000 --- --- --- --- 034798 00000 ------------ A 0.95 0.95 0.95 G 0.05 0.05 0.05 0000 --- --- --- --- 034939 00000 ------------ A 0.45 0.95 0.71 T 0.55 0.05 0.29 0000 --- --- --- --- 034963 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 035299 01889 SYNON C 0.45 0.95 0.70 T 0.55 0.05 0.30 0598 TGC TGT CYS(C) CYS(C) 035312 01902 NON-SYN A 0.76 0.55 0.66 G 0.24 0.45 0.34 0603 AAC GAC ASN(N) ASP(D) 035317 01907 SYNON C 0.46 0.95 0.70 T 0.54 0.05 0.30 0604 AAC AAT ASN(N) ASN(N) 035360 01950 NON-SYN T 0.96 1.00 0.98 G 0.04 0.00 0.02 0619 TCT GCT SER(S) ALA(A) 035383 01973 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0626 CCA CCG PRO(P) PRO(P) 035585 00000 ------------ G 0.46 0.96 0.70 A 0.54 0.04 0.30 0000 --- --- --- --- 035718 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 035900 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 036031 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036060 00000 ------------ C 0.83 0.54 0.69 A 0.17 0.46 0.31 0000 --- --- --- --- 036105 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 036232 00000 ------------ G 0.46 0.96 0.70 T 0.54 0.04 0.30 0000 --- --- --- --- 036253 01987 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0631 GGC GTC GLY(G) VAL(V) 036279 02013 NON-SYN G 0.46 0.96 0.70 T 0.54 0.04 0.30 0640 GTG TTG VAL(V) LEU(L) 036341 02075 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0660 GGA GGG GLY(G) GLY(G) 036343 02077 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0661 ACC AAC THR(T) ASN(N) 036379 02113 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0673 AAC AGC ASN(N) SER(S) 036604 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036650 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 036707 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 036736 00000 ------------ A 0.46 0.96 0.70 G 0.54 0.04 0.30 0000 --- --- --- --- 036880 00000 ------------ C 0.46 0.96 0.70 T 0.54 0.04 0.30 0000 --- --- --- --- 036995 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037013 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 037018 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037043 00000 ------------ C 0.46 0.96 0.70 G 0.54 0.04 0.30 0000 --- --- --- --- 037067 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 037138 00000 ------------ C 0.46 0.96 0.70 T 0.54 0.04 0.30 0000 --- --- --- --- 037185 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 037197 00000 ------------ C 0.44 0.91 0.67 T 0.56 0.09 0.33 0000 --- --- --- --- 037234 00000 ------------ T 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 037253 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 037458 00000 ------------ C 0.90 0.61 0.76 G 0.10 0.39 0.24 0000 --- --- --- --- 037495 00000 ------------ A 0.43 0.91 0.67 C 0.57 0.09 0.33 0000 --- --- --- --- 037674 02361 NON-SYN A 0.98 0.86 0.92 C 0.02 0.14 0.08 0756 ACT CCT THR(T) PRO(P) 037915 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 037946 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038676 02396 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0767 ACT ACC THR(T) THR(T) 038721 02441 SYNON G 0.43 0.93 0.67 A 0.57 0.07 0.33 0782 ACG ACA THR(T) THR(T) 039280 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 039339 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039365 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 039450 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 040351 00000 ------------ A 0.87 0.91 0.89 G 0.13 0.09 0.11 0000 --- --- --- --- 040470 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 040831 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 041140 00000 ------------ A 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 041154 00000 ------------ T 0.85 0.95 0.90 C 0.15 0.05 0.10 0000 --- --- --- --- 041155 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 041355 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 041368 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 041413 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 041571 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 041572 00000 ------------ - 0.02 0.04 0.03 + 0.98 0.96 0.97 0000 --- --- --- --- 041804 00000 ------------ - 0.15 0.46 0.30 + 0.85 0.54 0.70 0000 --- --- --- --- 041837 00000 ------------ T 0.85 0.95 0.90 G 0.15 0.05 0.10 0000 --- --- --- --- 041848 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 041955 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 041993 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 042294 00000 ------------ - 0.02 0.04 0.03 + 0.98 0.96 0.97 0000 --- --- --- --- 042302 00000 ------------ C 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 042593 00000 ------------ G 0.94 0.59 0.77 A 0.06 0.41 0.23 0000 --- --- --- --- 042755 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 043116 02777 3' UTR A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 043501 03162 3' UTR G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 043889 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 043894 00000 ------------ A 0.85 0.95 0.90 C 0.15 0.05 0.10 0000 --- --- --- --- 044242 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003467: AGGA 017738: T 018069: TTGT 018404: CTGTCATTGGCTCCAT 020643: AT 022431: C 026959: TGAA 030490: T 032150: T 041572: TTTATAATCTA 041804: ATG 042294: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000083 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 000173 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000296 00000 ------------ G 0.87 0.66 0.78 T 0.13 0.34 0.22 0000 --- --- --- --- 000327 00000 ------------ C 0.87 0.66 0.78 T 0.13 0.34 0.22 0000 --- --- --- --- 000663 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000903 00000 ------------ C 0.58 0.68 0.63 T 0.42 0.32 0.37 0000 --- --- --- --- 001232 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001355 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 001366 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 001532 00000 ------------ C 0.97 1.00 0.98 T 0.03 0.00 0.02 0000 --- --- --- --- 001646 00000 ------------ - 0.10 0.03 0.07 + 0.90 0.97 0.93 0000 --- --- --- --- 001850 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001895 00000 ------------ T 0.85 0.97 0.91 C 0.15 0.03 0.09 0000 --- --- --- --- 002088 00000 ------------ G 0.83 0.97 0.89 A 0.17 0.03 0.11 0000 --- --- --- --- 002427 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003228 00000 ------------ A 0.56 0.68 0.62 G 0.44 0.32 0.38 0000 --- --- --- --- 003349 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 003389 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003642 00000 ------------ C 0.86 0.98 0.92 T 0.14 0.02 0.08 0000 --- --- --- --- 003656 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003704 00000 ------------ A 0.84 0.98 0.91 T 0.16 0.02 0.09 0000 --- --- --- --- 003799 00000 ------------ A 0.83 0.37 0.61 G 0.17 0.63 0.39 0000 --- --- --- --- 003838 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003876 00000 ------------ C 0.81 0.35 0.59 T 0.19 0.65 0.41 0000 --- --- --- --- 004194 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004195 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 004335 00000 ------------ C 0.71 0.48 0.60 T 0.29 0.52 0.40 0000 --- --- --- --- 004351 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004406 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004804 00000 ------------ G 0.88 0.82 0.85 A 0.12 0.17 0.15 0000 --- --- --- --- 004809 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004811 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 004875 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005094 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005095 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005125 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005287 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 005511 00000 ------------ G 0.69 0.76 0.72 A 0.31 0.24 0.28 0000 --- --- --- --- 005542 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 006120 00000 ------------ C 0.89 0.82 0.85 T 0.11 0.18 0.15 0000 --- --- --- --- 006217 00000 ------------ G 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 006656 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006697 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006821 00000 ------------ T 0.96 0.72 0.84 C 0.04 0.28 0.16 0000 --- --- --- --- 006957 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007250 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007278 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007372 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007436 00000 ------------ C 0.67 0.65 0.66 T 0.33 0.35 0.34 0000 --- --- --- --- 007475 00000 ------------ A 0.44 0.70 0.56 C 0.56 0.30 0.44 0000 --- --- --- --- 007759 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007765 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 007768 00000 ------------ G 0.79 0.61 0.70 C 0.21 0.39 0.30 0000 --- --- --- --- 008045 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 008248 00000 ------------ C 1.00 0.96 0.97 T 0.00 0.04 0.03 0000 --- --- --- --- 008258 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 009145 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009629 00000 ------------ G 0.67 0.61 0.64 A 0.33 0.39 0.36 0000 --- --- --- --- 009939 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010035 00000 ------------ C 0.92 0.84 0.88 T 0.08 0.16 0.12 0000 --- --- --- --- 010049 00000 ------------ C 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 010137 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010138 00000 ------------ G 0.70 0.55 0.62 A 0.30 0.45 0.38 0000 --- --- --- --- 010328 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010546 00000 ------------ A 0.87 0.82 0.85 G 0.13 0.17 0.15 0000 --- --- --- --- 011060 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011200 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011620 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 011768 00000 ------------ G 0.62 0.50 0.56 A 0.38 0.50 0.44 0000 --- --- --- --- 011801 00000 ------------ T 0.83 0.97 0.90 G 0.17 0.03 0.10 0000 --- --- --- --- 011819 00000 ------------ T 0.48 0.72 0.59 A 0.52 0.28 0.41 0000 --- --- --- --- 011836 00000 ------------ T 0.83 1.00 0.90 C 0.17 0.00 0.10 0000 --- --- --- --- 011842 00000 ------------ G 0.96 0.83 0.90 A 0.04 0.17 0.10 0000 --- --- --- --- 012339 00245 NON-SYN G 0.74 0.90 0.82 A 0.26 0.10 0.18 0062 ATG ATA MET(M) ILE(I) 012889 00795 NON-SYN C 0.94 1.00 0.97 T 0.06 0.00 0.03 0246 CCC TCC PRO(P) SER(S) 013431 01337 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013434 01340 3' UTR G 0.71 0.98 0.84 T 0.29 0.02 0.16 0000 --- --- --- --- 013458 01364 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013715 01621 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014069 01975 3' UTR - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 014116 02022 3' UTR A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 014671 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014865 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015452 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 015474 00000 ------------ G 0.78 0.91 0.85 A 0.22 0.09 0.15 0000 --- --- --- --- 015481 00000 ------------ C 0.90 0.83 0.86 T 0.10 0.17 0.14 0000 --- --- --- --- 015543 00000 ------------ T 0.79 0.91 0.85 C 0.21 0.09 0.15 0000 --- --- --- --- 015651 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001646: C 008258: G 014069: CCCAGCTATCGCC Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000099 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000104 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000300 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 000457 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 000891 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001155 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001815 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 001910 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004776 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004777 00000 ------------ T 0.48 1.00 0.70 C 0.52 0.00 0.30 0000 --- --- --- --- 004950 00000 ------------ A 0.48 1.00 0.70 G 0.52 0.00 0.30 0000 --- --- --- --- 004955 00000 ------------ T 0.83 1.00 0.90 C 0.17 0.00 0.10 0000 --- --- --- --- 004977 00000 ------------ G 0.48 1.00 0.70 A 0.52 0.00 0.30 0000 --- --- --- --- 005344 00000 ------------ T 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 006207 00000 ------------ G 0.82 1.00 0.92 C 0.17 0.00 0.08 0000 --- --- --- --- 006299 00000 ------------ A 0.92 0.91 0.91 C 0.08 0.09 0.09 0000 --- --- --- --- 006363 00000 ------------ C 0.73 0.48 0.60 G 0.27 0.52 0.40 0000 --- --- --- --- 006621 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 006974 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006983 00000 ------------ A 0.82 1.00 0.91 C 0.18 0.00 0.09 0000 --- --- --- --- 006999 00000 ------------ G 1.00 0.57 0.78 C 0.00 0.43 0.22 0000 --- --- --- --- 007051 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007079 00000 ------------ C 0.91 0.91 0.91 T 0.09 0.09 0.09 0000 --- --- --- --- 007098 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 007315 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007826 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008105 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008193 00000 ------------ T 0.84 1.00 0.91 C 0.16 0.00 0.09 0000 --- --- --- --- 008271 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 008314 00000 ------------ T 0.80 1.00 0.89 C 0.20 0.00 0.11 0000 --- --- --- --- 008708 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008738 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008900 00000 ------------ G 0.48 1.00 0.73 A 0.52 0.00 0.27 0000 --- --- --- --- 008972 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009020 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009042 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 009241 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009260 00000 ------------ G 0.65 1.00 0.82 A 0.35 0.00 0.18 0000 --- --- --- --- 009388 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 009570 00000 ------------ T 0.50 0.59 0.54 C 0.50 0.41 0.46 0000 --- --- --- --- 009802 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009903 00000 ------------ G 0.96 0.91 0.93 A 0.04 0.09 0.07 0000 --- --- --- --- 010315 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010367 00000 ------------ A 0.50 1.00 0.75 G 0.50 0.00 0.25 0000 --- --- --- --- 010399 00000 ------------ G 0.50 1.00 0.75 T 0.50 0.00 0.25 0000 --- --- --- --- 010436 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010481 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011508 00000 ------------ C 0.96 0.91 0.94 T 0.04 0.09 0.06 0000 --- --- --- --- 011521 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011579 00000 ------------ C 0.92 0.48 0.70 A 0.08 0.52 0.30 0000 --- --- --- --- 011660 00000 ------------ T 0.92 0.48 0.70 C 0.08 0.52 0.30 0000 --- --- --- --- 012667 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 012770 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 012776 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 013058 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 013064 00000 ------------ A 1.00 0.58 0.81 G 0.00 0.42 0.19 0000 --- --- --- --- 014361 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014379 00000 ------------ G 0.48 1.00 0.73 C 0.52 0.00 0.27 0000 --- --- --- --- 014552 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 014781 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014916 00000 ------------ C 0.40 0.89 0.64 T 0.60 0.11 0.36 0000 --- --- --- --- 014969 00000 ------------ A 0.36 0.87 0.60 G 0.64 0.13 0.40 0000 --- --- --- --- 014990 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015322 00000 ------------ C 0.48 1.00 0.72 T 0.52 0.00 0.28 0000 --- --- --- --- 015332 00000 ------------ G 0.96 0.88 0.92 T 0.04 0.12 0.08 0000 --- --- --- --- 016091 00000 ------------ C 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 016185 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 016314 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016461 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016479 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 016500 00000 ------------ G 0.91 0.42 0.69 C 0.09 0.57 0.31 0000 --- --- --- --- 016638 00000 ------------ G 0.48 1.00 0.73 T 0.52 0.00 0.27 0000 --- --- --- --- 016859 00000 ------------ C 0.48 1.00 0.73 T 0.52 0.00 0.27 0000 --- --- --- --- 016872 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017147 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017324 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017417 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017631 00360 NON-SYN T 0.93 1.00 0.96 A 0.07 0.00 0.04 0115 TCC ACC SER(S) THR(T) 017676 00000 ------------ A 1.00 0.92 0.96 G 0.00 0.08 0.04 0000 --- --- --- --- 017784 00000 ------------ C 0.93 0.92 0.93 G 0.07 0.08 0.07 0000 --- --- --- --- 017804 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017964 00395 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0126 TGC TGT CYS(C) CYS(C) 018144 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 018294 00524 SYNON C 0.65 0.93 0.78 T 0.35 0.07 0.22 0169 TAC TAT TYR(Y) TYR(Y) 018632 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018703 00000 ------------ A 0.48 0.90 0.68 C 0.52 0.10 0.32 0000 --- --- --- --- 018864 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 019198 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019393 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 019808 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020276 00000 ------------ G 0.65 0.93 0.79 A 0.35 0.07 0.21 0000 --- --- --- --- 020800 00000 ------------ T 0.68 0.85 0.76 G 0.33 0.15 0.24 0000 --- --- --- --- 021326 01256 SYNON C 0.65 0.93 0.79 T 0.35 0.07 0.21 0413 GTC GTT VAL(V) VAL(V) 021704 00000 ------------ G 0.65 0.93 0.79 A 0.35 0.07 0.21 0000 --- --- --- --- 022409 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 022509 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022587 00000 ------------ C 0.43 0.75 0.59 T 0.57 0.25 0.41 0000 --- --- --- --- 023611 00000 ------------ C 0.65 0.93 0.79 T 0.35 0.07 0.21 0000 --- --- --- --- 023681 00000 ------------ C 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 024340 01562 SYNON A 0.33 0.76 0.54 G 0.67 0.24 0.46 0515 CAA CAG GLN(Q) GLN(Q) 024836 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025247 01961 SYNON C 0.65 0.93 0.79 T 0.35 0.07 0.21 0648 GCC GCT ALA(A) ALA(A) 025375 02089 3' UTR G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 025491 02205 3' UTR C 0.65 0.93 0.79 T 0.35 0.07 0.21 0000 --- --- --- --- 025608 02322 3' UTR A 0.88 0.93 0.90 G 0.12 0.07 0.10 0000 --- --- --- --- 026258 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026496 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026857 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 027069 00000 ------------ C 0.69 0.86 0.77 T 0.31 0.14 0.23 0000 --- --- --- --- NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000457: GCTGGCTTCAGGGCC 006621: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000107 00000 ------------ T 0.77 0.61 0.69 C 0.23 0.39 0.31 0000 --- --- --- --- 000251 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000267 00000 ------------ T 0.83 0.80 0.82 C 0.17 0.20 0.18 0000 --- --- --- --- 000295 00000 ------------ G 0.75 0.61 0.68 C 0.25 0.39 0.32 0000 --- --- --- --- 000304 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000320 00000 ------------ T 0.77 0.61 0.69 G 0.23 0.39 0.31 0000 --- --- --- --- 000346 00000 ------------ C 0.77 0.61 0.69 A 0.23 0.39 0.31 0000 --- --- --- --- 000414 00000 ------------ C 0.71 0.63 0.67 T 0.29 0.37 0.33 0000 --- --- --- --- 000415 00000 ------------ G 0.81 0.83 0.82 A 0.19 0.17 0.18 0000 --- --- --- --- 000512 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000750 00000 ------------ T 0.85 0.83 0.84 C 0.15 0.17 0.16 0000 --- --- --- --- 000792 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000904 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000994 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001073 00000 ------------ G 0.89 0.80 0.85 A 0.11 0.20 0.15 0000 --- --- --- --- 001284 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 001297 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001328 00000 ------------ C 0.71 0.41 0.56 T 0.29 0.59 0.44 0000 --- --- --- --- 001338 00000 ------------ C 0.71 0.41 0.56 G 0.29 0.59 0.44 0000 --- --- --- --- 001359 00000 ------------ G 0.67 0.41 0.53 A 0.33 0.59 0.47 0000 --- --- --- --- 001616 00154 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0044 AGC GGC SER(S) GLY(G) 001636 00174 SYNON T 0.42 0.91 0.66 C 0.58 0.09 0.34 0050 TTT TTC PHE(F) PHE(F) 001650 00188 NON-SYN C 0.43 0.91 0.67 T 0.57 0.09 0.33 0055 GCC GTC ALA(A) VAL(V) 001677 00215 NON-SYN A 0.89 0.63 0.76 G 0.11 0.37 0.24 0064 AAC AGC ASN(N) SER(S) 001678 00216 SYNON C 0.43 0.91 0.67 T 0.57 0.09 0.33 0064 AAC AAT ASN(N) ASN(N) 001767 00305 NON-SYN G 0.98 1.00 0.99 T 0.02 0.00 0.01 0094 GGC GTC GLY(G) VAL(V) 001799 00337 NON-SYN A 0.47 0.91 0.71 G 0.53 0.09 0.29 0105 AAG GAG LYS(K) GLU(E) 001830 00368 NON-SYN T 1.00 0.98 0.99 C 0.00 0.02 0.01 0115 CTT CCT LEU(L) PRO(P) 001963 00501 SYNON C 0.89 0.63 0.76 T 0.11 0.37 0.24 0159 CCC CCT PRO(P) PRO(P) 002359 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 002589 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 003141 00000 ------------ G 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 003341 00000 ------------ T 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 003345 00000 ------------ C 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 003347 00000 ------------ G 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 003390 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003409 00000 ------------ A 0.85 0.93 0.89 T 0.15 0.07 0.11 0000 --- --- --- --- 003598 00000 ------------ + 1.00 0.98 0.99 - 0.00 0.02 0.01 0000 --- --- --- --- 003670 00000 ------------ T 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 003772 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003894 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003900 00000 ------------ G 0.70 0.59 0.64 A 0.30 0.41 0.36 0000 --- --- --- --- 004051 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 004194 00673 NON-SYN G 0.93 1.00 0.97 C 0.07 0.00 0.03 0217 GGC CGC GLY(G) ARG(R) 004316 00795 SYNON C 0.94 1.00 0.97 G 0.06 0.00 0.03 0257 GTC GTG VAL(V) VAL(V) 004677 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005057 00000 ------------ A 0.95 0.61 0.77 G 0.05 0.39 0.23 0000 --- --- --- --- 005081 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 005919 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005931 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006177 00000 ------------ G 0.94 0.62 0.79 A 0.06 0.38 0.21 0000 --- --- --- --- 006279 01131 SYNON A 0.67 0.55 0.61 C 0.33 0.45 0.39 0369 ATA ATC ILE(I) ILE(I) 006294 01146 SYNON G 0.89 1.00 0.94 A 0.11 0.00 0.06 0374 TCG TCA SER(S) SER(S) 006431 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006448 00000 ------------ T 0.50 0.54 0.52 A 0.50 0.46 0.48 0000 --- --- --- --- 006459 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006510 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 006554 00000 ------------ G 0.81 0.91 0.86 A 0.19 0.09 0.14 0000 --- --- --- --- 006620 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006630 00000 ------------ A 0.67 0.57 0.62 G 0.33 0.43 0.38 0000 --- --- --- --- 006742 00000 ------------ A 0.67 0.57 0.62 G 0.33 0.43 0.38 0000 --- --- --- --- 006824 00000 ------------ G 0.83 0.91 0.88 C 0.17 0.09 0.12 0000 --- --- --- --- 006893 00000 ------------ C 0.53 0.54 0.54 T 0.47 0.46 0.46 0000 --- --- --- --- 007004 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007027 00000 ------------ G 1.00 0.89 0.94 A 0.00 0.11 0.06 0000 --- --- --- --- 007198 00000 ------------ A 0.67 0.61 0.63 G 0.33 0.39 0.37 0000 --- --- --- --- 007559 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007599 00000 ------------ A 0.67 0.58 0.63 G 0.33 0.42 0.37 0000 --- --- --- --- 007681 00000 ------------ G 0.67 0.57 0.62 A 0.33 0.42 0.38 0000 --- --- --- --- 007904 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003598: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000276 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000326 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 000507 00000 ------------ A 0.96 0.88 0.92 G 0.04 0.12 0.08 0000 --- --- --- --- 001734 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 001913 00000 ------------ C 0.72 0.87 0.79 T 0.28 0.13 0.21 0000 --- --- --- --- 002223 00000 ------------ + 0.12 0.00 0.07 - 0.88 1.00 0.93 0000 --- --- --- --- 002239 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 002415 00000 ------------ C 0.71 0.86 0.78 A 0.29 0.14 0.22 0000 --- --- --- --- 002470 00000 ------------ G 0.71 0.87 0.79 A 0.29 0.13 0.21 0000 --- --- --- --- 002676 00000 ------------ T 0.94 0.86 0.90 A 0.06 0.14 0.10 0000 --- --- --- --- 003158 00000 ------------ A 0.40 0.80 0.59 G 0.60 0.20 0.41 0000 --- --- --- --- 003212 00000 ------------ G 0.71 0.86 0.78 C 0.29 0.14 0.22 0000 --- --- --- --- 003656 00000 ------------ A 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 003780 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003876 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 003941 -----** NON-SYN T 1.00 0.98 0.99 A 0.00 0.02 0.01 0030 GTG GAG VAL(V) GLU(E) 004523 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005221 00000 ------------ A 0.52 0.89 0.70 G 0.48 0.11 0.30 0000 --- --- --- --- 005314 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 005403 00000 ------------ T 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 005701 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006058 00000 ------------ G 0.94 0.95 0.95 A 0.06 0.05 0.05 0000 --- --- --- --- 006080 00000 ------------ G 0.29 0.80 0.53 A 0.71 0.20 0.47 0000 --- --- --- --- 006531 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006577 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006656 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006829 -----** NON-SYN A 0.94 1.00 0.97 G 0.06 0.00 0.03 0147 ACA GCA THR(T) ALA(A) 007199 00000 ------------ G 0.93 0.97 0.95 T 0.07 0.03 0.05 0000 --- --- --- --- 007975 -----** SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0226 ACC ACT THR(T) THR(T) 008313 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008389 00000 ------------ G 0.67 0.97 0.80 T 0.33 0.03 0.20 0000 --- --- --- --- 008773 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 009089 -----** SYNON A 0.35 0.74 0.54 G 0.65 0.26 0.46 0327 GTA GTG VAL(V) VAL(V) 009119 -----** SYNON A 0.35 0.72 0.53 G 0.65 0.28 0.47 0337 CAA CAG GLN(Q) GLN(Q) 009480 00000 ------------ T 0.37 0.74 0.55 C 0.63 0.26 0.45 0000 --- --- --- --- 011395 00000 ------------ G 0.98 0.84 0.91 C 0.02 0.16 0.09 0000 --- --- --- --- 012489 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 012555 00000 ------------ A 0.94 0.87 0.90 C 0.06 0.13 0.10 0000 --- --- --- --- 012703 00000 ------------ + 0.21 0.00 0.11 - 0.79 1.00 0.89 0000 --- --- --- --- 012871 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013097 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 013327 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 013353 00000 ------------ + 0.73 0.93 0.83 - 0.27 0.07 0.17 0000 --- --- --- --- 013898 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 014443 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015513 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015800 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016151 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016188 00000 ------------ C 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002223: T 012703: T 013327: C 013353: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000100 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000186 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 000412 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 000664 00000 ------------ G 0.73 0.52 0.63 A 0.27 0.48 0.37 0000 --- --- --- --- 000837 00000 ------------ + 0.75 0.54 0.65 - 0.25 0.46 0.35 0000 --- --- --- --- 001002 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001337 00000 ------------ + 0.05 0.00 0.03 - 0.95 1.00 0.97 0000 --- --- --- --- 001502 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001587 00007 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001746 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001872 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 002035 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002037 00000 ------------ A 0.90 0.98 0.94 T 0.10 0.02 0.06 0000 --- --- --- --- 002188 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002262 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002362 00000 ------------ + 0.91 0.98 0.94 - 0.09 0.02 0.06 0000 --- --- --- --- 002380 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002627 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002714 00000 ------------ + 0.94 1.00 0.97 - 0.06 0.00 0.03 0000 --- --- --- --- 002753 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002846 00118 NON-SYN G 1.00 0.89 0.95 A 0.00 0.11 0.05 0015 GCC ACC ALA(A) THR(T) 002852 00124 NON-SYN G 0.90 0.98 0.93 A 0.10 0.02 0.07 0017 GTC ATC VAL(V) ILE(I) 002877 00149 NON-SYN A 0.98 1.00 0.99 C 0.02 0.00 0.01 0025 CAC CCC HIS(H) PRO(P) 003268 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003302 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003373 00000 ------------ + 0.93 1.00 0.97 - 0.07 0.00 0.03 0000 --- --- --- --- 003404* 003408 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003433 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 003434 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 003448 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 003451 00000 ------------ + 0.90 1.00 0.95 - 0.10 0.00 0.05 0000 --- --- --- --- 003508 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 003512 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003567 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004588 00000 ------------ C 0.89 0.77 0.83 T 0.11 0.23 0.17 0000 --- --- --- --- 005137 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 005262 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 005278 00000 ------------ + 0.93 1.00 0.96 - 0.07 0.00 0.04 0000 --- --- --- --- 005404 00000 ------------ A 0.87 0.74 0.80 G 0.13 0.26 0.20 0000 --- --- --- --- 005596 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 005645 00000 ------------ C 0.78 0.67 0.73 T 0.22 0.33 0.27 0000 --- --- --- --- 005686 00000 ------------ G 0.89 0.76 0.83 A 0.11 0.24 0.17 0000 --- --- --- --- 005708 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005725 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005834 00000 ------------ G 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 005878 00000 ------------ A 0.72 0.78 0.76 G 0.28 0.22 0.24 0000 --- --- --- --- 005984 00000 ------------ G 0.93 0.78 0.85 A 0.07 0.23 0.15 0000 --- --- --- --- 006411 00701 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0209 CGC CAC ARG(R) HIS(H) 006433 00723 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0216 GAC GAT ASP(D) ASP(D) 006753 00000 ------------ + 0.97 1.00 0.99 - 0.03 0.00 0.01 0000 --- --- --- --- 006821 00000 ------------ G 0.97 0.89 0.93 T 0.03 0.11 0.07 0000 --- --- --- --- 007121 00000 ------------ A 0.52 0.66 0.59 G 0.48 0.34 0.41 0000 --- --- --- --- 007343 00000 ------------ A 0.65 0.76 0.71 G 0.35 0.24 0.29 0000 --- --- --- --- 007356 00000 ------------ + 0.85 1.00 0.92 - 0.15 0.00 0.08 0000 --- --- --- --- 007365 00000 ------------ A 0.96 0.79 0.88 T 0.04 0.21 0.12 0000 --- --- --- --- 007389 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 007429 00000 ------------ G 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 007437 00000 ------------ C 0.52 0.67 0.60 T 0.48 0.33 0.40 0000 --- --- --- --- 007722 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007729 00000 ------------ + 0.06 0.22 0.14 - 0.94 0.78 0.86 0000 --- --- --- --- 007770 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 007771 00000 ------------ G 0.94 0.80 0.87 A 0.06 0.20 0.13 0000 --- --- --- --- 008070 00000 ------------ G 0.52 0.68 0.60 A 0.48 0.32 0.40 0000 --- --- --- --- 008092 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008178 00839 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0255 ACC AAC THR(T) ASN(N) 008406 00000 ------------ T 0.52 0.67 0.60 C 0.48 0.33 0.40 0000 --- --- --- --- 008511 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009463 00000 ------------ A 0.52 0.68 0.60 G 0.48 0.32 0.40 0000 --- --- --- --- 009466 00000 ------------ C 0.52 0.68 0.60 T 0.48 0.32 0.40 0000 --- --- --- --- 009532 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009538 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009759 00000 ------------ A 0.95 0.89 0.92 G 0.05 0.11 0.08 0000 --- --- --- --- 010327 00000 ------------ C 0.84 1.00 0.92 T 0.16 0.00 0.08 0000 --- --- --- --- 010381 00000 ------------ C 0.80 0.88 0.83 T 0.20 0.12 0.17 0000 --- --- --- --- 010461 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 011312 00000 ------------ G 0.91 0.76 0.84 A 0.09 0.24 0.16 0000 --- --- --- --- 011981 01407 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012025 01451 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012163 01589 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012219 01645 3' UTR T 0.55 0.67 0.61 C 0.45 0.33 0.39 0000 --- --- --- --- 012580 02006 3' UTR T 0.54 0.67 0.61 G 0.46 0.33 0.39 0000 --- --- --- --- 012603 02029 3' UTR C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012750 02176 3' UTR G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 012847 02273 3' UTR + 0.95 0.83 0.89 - 0.05 0.17 0.11 0000 --- --- --- --- 013053 02479 3' UTR C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 013140 02566 3' UTR + 0.00 0.02 0.01 - 1.00 0.98 0.99 0000 --- --- --- --- 013226 02652 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013317 02743 3' UTR C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 013605 00000 ------------ G 0.75 0.78 0.77 A 0.25 0.22 0.23 0000 --- --- --- --- 013651 00000 ------------ + 0.98 1.00 0.99 - 0.02 0.00 0.01 0000 --- --- --- --- 013856 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013889 00000 ------------ T 0.54 0.68 0.61 C 0.46 0.32 0.39 0000 --- --- --- --- 013985 00000 ------------ C 0.98 0.86 0.92 T 0.02 0.14 0.08 0000 --- --- --- --- 014137 00000 ------------ G 0.75 1.00 0.87 A 0.25 0.00 0.13 0000 --- --- --- --- 014440 00000 ------------ G 0.76 0.71 0.74 A 0.24 0.29 0.26 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000837: G 001337: CA 002362: A 002714: AGA 003373: AA 003451: CA 005278: A 005596: CTGAGC 006753: T 007356: A 007729: CAAA 012847: CGCGCCCC 013140: G 013651: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 003404 A 0.93 0.98 0.95 C 0.05 0.00 0.02 G 0.02 0.02 0.02 Site CDNA-Pos Description Allele1 -freq ED-freq Total-freq Allele2 ED-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000135 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000287 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000360 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000386 00000 ------------ G 0.86 0.96 0.91 A 0.14 0.04 0.09 0000 --- --- --- --- 000604 00000 ------------ T 0.86 0.96 0.91 C 0.14 0.04 0.09 0000 --- --- --- --- 000819 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 001005 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 001046 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001955 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 002210 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002281 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002354 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 002477 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002567 00040 5' UTR T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 002739 00000 ------------ G 0.98 0.82 0.90 A 0.02 0.18 0.10 0000 --- --- --- --- 002851 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003502 00000 ------------ C 0.54 0.72 0.63 T 0.46 0.28 0.37 0000 --- --- --- --- 004068 00000 ------------ C 0.58 0.72 0.65 T 0.42 0.28 0.35 0000 --- --- --- --- 005854 00000 ------------ C 0.88 0.75 0.82 G 0.12 0.25 0.18 0000 --- --- --- --- 005859 00000 ------------ A 0.88 0.75 0.82 C 0.12 0.25 0.18 0000 --- --- --- --- 006199 00000 ------------ A 0.52 0.70 0.61 G 0.48 0.30 0.39 0000 --- --- --- --- 006576 00000 ------------ G 0.88 0.75 0.82 A 0.12 0.25 0.18 0000 --- --- --- --- 006803 00000 ------------ T 0.85 0.76 0.81 C 0.15 0.24 0.19 0000 --- --- --- --- 008757 00000 ------------ G 0.88 0.76 0.82 T 0.12 0.24 0.18 0000 --- --- --- --- 008764 00000 ------------ G 0.85 0.76 0.81 A 0.15 0.24 0.19 0000 --- --- --- --- 009372 00000 ------------ A 0.91 0.76 0.84 G 0.09 0.24 0.16 0000 --- --- --- --- 010324 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010489 00906 SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 0282 CCC CCT PRO(P) PRO(P) 011178 00000 ------------ T 0.91 0.76 0.83 C 0.09 0.24 0.17 0000 --- --- --- --- 011717 00000 ------------ C 0.90 0.76 0.83 G 0.10 0.24 0.17 0000 --- --- --- --- 011792 00000 ------------ G 0.90 0.76 0.83 T 0.10 0.24 0.17 0000 --- --- --- --- 014814 00000 ------------ A 0.87 0.76 0.82 G 0.13 0.24 0.18 0000 --- --- --- --- 014838 00000 ------------ G 0.85 0.52 0.68 T 0.15 0.48 0.32 0000 --- --- --- --- 015486 00000 ------------ G 0.59 0.52 0.55 A 0.41 0.48 0.45 0000 --- --- --- --- 016016 00000 ------------ G 0.52 0.75 0.63 A 0.48 0.25 0.37 0000 --- --- --- --- 016224 01278 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0406 AGC AGT SER(S) SER(S) 017116 00000 ------------ C 0.74 1.00 0.86 T 0.26 0.00 0.14 0000 --- --- --- --- 017317 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017633 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017797 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 018365 00000 ------------ T 0.90 0.52 0.71 C 0.10 0.48 0.29 0000 --- --- --- --- 018835 01498 NON-SYN G 0.88 0.76 0.82 A 0.12 0.24 0.18 0480 GTG ATG VAL(V) MET(M) NOTE: ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001955: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000053 00000 ------------ A 0.98 0.93 0.95 G 0.02 0.07 0.05 0000 --- --- --- --- 000232 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000396 00000 ------------ C 0.77 0.98 0.88 T 0.23 0.02 0.12 0000 --- --- --- --- 000434 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 000578 00000 ------------ T 1.00 0.85 0.92 C 0.00 0.15 0.08 0000 --- --- --- --- 000647 00000 ------------ C 0.86 0.96 0.91 G 0.14 0.04 0.09 0000 --- --- --- --- 000687 00000 ------------ C 0.88 0.96 0.92 T 0.12 0.04 0.08 0000 --- --- --- --- 000835 00000 ------------ G 0.86 0.96 0.91 A 0.14 0.04 0.09 0000 --- --- --- --- 001029 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001064 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001118 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001147 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 001219 00000 ------------ A 0.79 0.98 0.88 G 0.21 0.02 0.12 0000 --- --- --- --- 001640 00000 ------------ G 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 001646 00000 ------------ A 0.90 0.93 0.91 G 0.10 0.07 0.09 0000 --- --- --- --- 001795 00000 ------------ - 0.12 0.04 0.09 + 0.88 0.96 0.91 0000 --- --- --- --- 001845 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001870 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 001903 00000 ------------ A 0.79 0.98 0.88 G 0.21 0.02 0.12 0000 --- --- --- --- 001926 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 002135 00000 ------------ T 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 002189 00000 ------------ A 0.64 0.88 0.77 G 0.36 0.12 0.23 0000 --- --- --- --- 002361 00000 ------------ T 1.00 0.95 0.97 C 0.00 0.05 0.03 0000 --- --- --- --- 002401 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 002606 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 002764 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 002999 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 003048 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 003151 00000 ------------ C 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 003234 00000 ------------ C 0.79 0.98 0.88 A 0.21 0.02 0.12 0000 --- --- --- --- 003268 00000 ------------ G 0.79 0.98 0.88 T 0.21 0.02 0.12 0000 --- --- --- --- 003304 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003362 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 003612 00000 ------------ A 0.98 0.93 0.95 T 0.02 0.07 0.05 0000 --- --- --- --- 003667 00000 ------------ G 0.76 0.98 0.88 A 0.24 0.02 0.12 0000 --- --- --- --- 004000 00000 ------------ G 0.88 0.95 0.91 A 0.12 0.05 0.09 0000 --- --- --- --- 004008 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 004151 00000 ------------ - 0.03 0.07 0.05 + 0.97 0.93 0.95 0000 --- --- --- --- 004291 00000 ------------ G 0.67 0.89 0.78 A 0.33 0.11 0.22 0000 --- --- --- --- 004578 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 004755 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004801 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004835 00000 ------------ - 0.67 0.89 0.78 + 0.33 0.11 0.22 0000 --- --- --- --- 004941 00000 ------------ G 0.92 0.93 0.93 A 0.08 0.07 0.07 0000 --- --- --- --- 005027 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005166 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 005216 00000 ------------ G 0.92 0.93 0.93 A 0.08 0.07 0.07 0000 --- --- --- --- 005376 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005583 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 005740 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006131 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 006169 00000 ------------ A 0.65 0.83 0.73 G 0.35 0.17 0.27 0000 --- --- --- --- 006334 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 006446 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006614 00000 ------------ T 0.97 0.98 0.98 G 0.03 0.02 0.02 0000 --- --- --- --- 006629 00000 ------------ - 0.10 0.07 0.09 + 0.90 0.93 0.91 0000 --- --- --- --- 006809 00000 ------------ C 0.86 0.93 0.90 T 0.14 0.07 0.10 0000 --- --- --- --- 006936 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 007031 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007136 00000 ------------ G 0.79 0.98 0.88 C 0.21 0.02 0.12 0000 --- --- --- --- 007432 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 007948 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007993 00000 ------------ T 0.92 0.93 0.93 G 0.08 0.07 0.07 0000 --- --- --- --- 008031 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 008056 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008159 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008233 00000 ------------ G 0.64 0.89 0.77 A 0.36 0.11 0.23 0000 --- --- --- --- 008451 00000 ------------ T 0.64 0.88 0.75 C 0.36 0.12 0.25 0000 --- --- --- --- 008452 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008528 00000 ------------ T 0.84 0.98 0.91 C 0.16 0.02 0.09 0000 --- --- --- --- 008746 00000 ------------ G 0.98 0.93 0.96 C 0.02 0.07 0.04 0000 --- --- --- --- 008774 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008818 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 008849 00000 ------------ A 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 008908 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008949 00000 ------------ C 0.90 0.89 0.89 T 0.10 0.11 0.11 0000 --- --- --- --- 009248 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009252 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 009361 00000 ------------ C 0.88 0.93 0.90 T 0.12 0.07 0.10 0000 --- --- --- --- 009418 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 009504 00000 ------------ T 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 009510 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009550 00000 ------------ G 0.94 0.28 0.62 T 0.06 0.72 0.38 0000 --- --- --- --- 009619 00000 ------------ G 0.79 0.98 0.88 A 0.21 0.02 0.12 0000 --- --- --- --- 009742 00000 ------------ G 0.94 0.95 0.95 A 0.06 0.05 0.05 0000 --- --- --- --- 009822 00000 ------------ G 0.76 0.98 0.88 T 0.24 0.02 0.12 0000 --- --- --- --- 009851 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009866 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010112 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 010146 00000 ------------ C 0.72 0.91 0.83 A 0.28 0.09 0.17 0000 --- --- --- --- 010284 00000 ------------ C 0.97 0.93 0.95 T 0.03 0.07 0.05 0000 --- --- --- --- 010570 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 010670 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 010962 00000 ------------ G 0.80 0.91 0.86 T 0.20 0.09 0.14 0000 --- --- --- --- 011042 00000 ------------ A 0.82 0.98 0.90 T 0.18 0.02 0.10 0000 --- --- --- --- 011228 -----** NON-SYN A 0.94 1.00 0.97 C 0.06 0.00 0.03 0009 AAC ACC ASN(N) THR(T) 011258 -----** NON-SYN T 0.97 0.93 0.95 C 0.03 0.07 0.05 0019 GTG GCG VAL(V) ALA(A) 011319 -----** SYNON C 0.86 0.93 0.90 T 0.14 0.07 0.10 0039 CAC CAT HIS(H) HIS(H) 011350 -----** NON-SYN G 0.37 0.77 0.57 C 0.63 0.23 0.43 0050 GTC CTC VAL(V) LEU(L) 011545 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011574 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 011702 -----** SYNON A 0.80 0.93 0.86 G 0.20 0.07 0.14 0062 CCA CCG PRO(P) PRO(P) 011853 00000 ------------ - 0.15 0.14 0.14 + 0.85 0.86 0.86 0000 --- --- --- --- 012066 00000 ------------ T 0.83 0.86 0.85 C 0.17 0.14 0.15 0000 --- --- --- --- 012123 00000 ------------ T 0.69 0.77 0.73 A 0.31 0.23 0.27 0000 --- --- --- --- 012140 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012141 00000 ------------ G 0.97 0.93 0.95 A 0.03 0.07 0.05 0000 --- --- --- --- 012161 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012194 00000 ------------ G 0.42 0.75 0.60 A 0.57 0.25 0.40 0000 --- --- --- --- 012282 00000 ------------ - 0.38 0.75 0.57 + 0.62 0.25 0.43 0000 --- --- --- --- 012308 00000 ------------ G 0.64 0.86 0.74 A 0.36 0.14 0.26 0000 --- --- --- --- 012329 00000 ------------ A 0.77 0.91 0.84 G 0.23 0.09 0.16 0000 --- --- --- --- 012333 00000 ------------ T 0.75 0.90 0.83 G 0.25 0.10 0.17 0000 --- --- --- --- 012667 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012693 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 012803 00000 ------------ C 0.35 0.76 0.55 G 0.65 0.24 0.45 0000 --- --- --- --- 012876 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 012964 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 013063 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013142 -----** SYNON A 0.98 0.93 0.96 G 0.02 0.07 0.04 0133 ACA ACG THR(T) THR(T) 013295 -----** SYNON T 0.96 0.98 0.97 C 0.04 0.02 0.03 0184 TAT TAC TYR(Y) TYR(Y) 013349 -----** SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0202 GAC GAT ASP(D) ASP(D) 013398 -----** NON-SYN C 0.88 0.98 0.93 T 0.12 0.02 0.07 0219 CGG TGG ARG(R) TRP(W) 013467 -----** TRUNCATION C 0.98 1.00 0.99 T 0.02 0.00 0.01 0242 CGA TGA ARG(R) *** 013524 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013655 00000 ------------ G 1.00 0.80 0.90 A 0.00 0.20 0.10 0000 --- --- --- --- 013703 00000 ------------ T 0.76 0.89 0.83 C 0.24 0.11 0.17 0000 --- --- --- --- 013704 00000 ------------ C 0.76 0.89 0.83 A 0.24 0.11 0.17 0000 --- --- --- --- 013739 00000 ------------ C 0.76 0.89 0.83 A 0.24 0.11 0.17 0000 --- --- --- --- 013882 00000 ------------ G 0.35 0.76 0.55 C 0.65 0.24 0.45 0000 --- --- --- --- 013883 00000 ------------ C 0.35 0.76 0.55 T 0.65 0.24 0.45 0000 --- --- --- --- 013890 00000 ------------ A 0.76 0.52 0.64 G 0.24 0.48 0.36 0000 --- --- --- --- 013891 00000 ------------ G 0.35 0.76 0.55 A 0.65 0.24 0.45 0000 --- --- --- --- 013892 00000 ------------ - 0.65 0.24 0.45 + 0.35 0.76 0.55 0000 --- --- --- --- 013959 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 014089 00000 ------------ T 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 014120 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 014224 00000 ------------ G 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 014283 00000 ------------ T 0.98 0.24 0.60 C 0.02 0.76 0.40 0000 --- --- --- --- 014289 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014389 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014519 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 014532 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014540 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 014609 00000 ------------ T 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 014618 00000 ------------ T 0.30 0.76 0.53 C 0.70 0.24 0.47 0000 --- --- --- --- 014950 00000 ------------ G 0.97 0.93 0.95 A 0.03 0.07 0.05 0000 --- --- --- --- 015102 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 015171 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 015358 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 015535 00000 ------------ - 0.21 0.05 0.13 + 0.79 0.95 0.87 0000 --- --- --- --- 015561 00000 ------------ T 0.42 0.75 0.58 A 0.58 0.25 0.42 0000 --- --- --- --- 016260 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016333 00000 ------------ G 0.92 0.93 0.93 C 0.08 0.07 0.07 0000 --- --- --- --- 016430 00000 ------------ T 0.98 0.97 0.98 C 0.02 0.03 0.02 0000 --- --- --- --- 016436 00000 ------------ G 1.00 0.82 0.91 C 0.00 0.17 0.09 0000 --- --- --- --- 016438 00000 ------------ A 0.91 0.93 0.92 G 0.09 0.07 0.08 0000 --- --- --- --- 016622 00000 ------------ A 0.98 0.37 0.67 T 0.02 0.63 0.33 0000 --- --- --- --- 016690 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016752 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016917 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 017252 00000 ------------ T 0.90 0.93 0.92 G 0.10 0.07 0.08 0000 --- --- --- --- 017356 00000 ------------ G 0.88 0.93 0.91 T 0.12 0.07 0.09 0000 --- --- --- --- 017429 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 017699 00000 ------------ T 1.00 0.82 0.90 G 0.00 0.18 0.10 0000 --- --- --- --- 017814 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017900 00000 ------------ T 0.75 0.95 0.85 C 0.25 0.05 0.15 0000 --- --- --- --- 018021 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018364 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018887 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 018894 00000 ------------ G 0.73 0.93 0.83 A 0.27 0.07 0.17 0000 --- --- --- --- 019078 00000 ------------ A 0.40 0.76 0.57 G 0.60 0.24 0.43 0000 --- --- --- --- 019690 00000 ------------ T 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 019739 00000 ------------ G 0.77 0.89 0.83 A 0.23 0.11 0.17 0000 --- --- --- --- 019768 00000 ------------ A 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 019839 00000 ------------ C 0.62 0.93 0.77 T 0.38 0.07 0.23 0000 --- --- --- --- 019841 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020071 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020140 00000 ------------ - 0.37 0.07 0.22 + 0.63 0.93 0.78 0000 --- --- --- --- 020171 00000 ------------ - 0.04 0.02 0.03 + 0.96 0.98 0.97 0000 --- --- --- --- 020295 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 020366 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020900 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 020927 00000 ------------ C 0.61 0.93 0.78 G 0.39 0.07 0.22 0000 --- --- --- --- 020971 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 021039 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021052 00000 ------------ A 0.36 0.76 0.57 G 0.64 0.24 0.43 0000 --- --- --- --- 021079 00000 ------------ C 0.70 0.93 0.82 T 0.30 0.07 0.18 0000 --- --- --- --- 021142 00000 ------------ G 0.39 0.76 0.58 T 0.61 0.24 0.42 0000 --- --- --- --- 021468 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021562 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 021569 00000 ------------ A 0.96 0.98 0.97 C 0.04 0.02 0.03 0000 --- --- --- --- 021764 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 021844 00000 ------------ G 0.65 0.93 0.79 C 0.35 0.07 0.21 0000 --- --- --- --- 021885 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 021911 00000 ------------ T 0.65 0.93 0.79 A 0.35 0.07 0.21 0000 --- --- --- --- 022298 00000 ------------ A 0.65 0.93 0.79 G 0.35 0.07 0.21 0000 --- --- --- --- 022343 00000 ------------ A 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 022344 00000 ------------ T 0.42 0.76 0.59 C 0.58 0.24 0.41 0000 --- --- --- --- 022377 00000 ------------ A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 022379 00000 ------------ T 0.65 0.93 0.79 G 0.35 0.07 0.21 0000 --- --- --- --- 022878 00000 ------------ T 0.65 0.93 0.79 C 0.35 0.07 0.21 0000 --- --- --- --- 023509 00000 ------------ T 0.65 0.93 0.79 A 0.35 0.07 0.21 0000 --- --- --- --- 023572 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023947 00000 ------------ T 0.73 0.93 0.83 C 0.27 0.07 0.17 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001795: TTA 004151: TT 004835: G 006629: CT 011853: G 012282: TTG 013892: CCCACTGCCTG 015535: CTTATG 018887: GTT 020140: A 020171: T Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000207 00000 ------------ G 0.87 0.87 0.87 C 0.13 0.13 0.13 0000 --- --- --- --- 000498 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 000555 00000 ------------ C 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 000760 00000 ------------ T 0.92 0.93 0.93 G 0.08 0.07 0.07 0000 --- --- --- --- 000773 00000 ------------ T 0.69 0.98 0.83 C 0.31 0.02 0.17 0000 --- --- --- --- 000793 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000859 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 001063 00000 ------------ A 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 001088 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 001457 00000 ------------ G 0.90 0.97 0.94 C 0.10 0.03 0.06 0000 --- --- --- --- 001487 00000 ------------ - 0.02 0.07 0.05 + 0.98 0.93 0.95 0000 --- --- --- --- 001489 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001583 00000 ------------ T 0.25 0.78 0.52 G 0.75 0.22 0.48 0000 --- --- --- --- 001587 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 001637 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 001775 00000 ------------ T 0.85 0.87 0.86 G 0.15 0.13 0.14 0000 --- --- --- --- 001816 00000 ------------ A 0.92 0.95 0.93 G 0.08 0.05 0.07 0000 --- --- --- --- 002099 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002339 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002396 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 002472 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003039 00000 ------------ G 0.50 0.87 0.68 T 0.50 0.13 0.32 0000 --- --- --- --- 003812 00000 ------------ A 0.82 0.86 0.84 G 0.18 0.14 0.16 0000 --- --- --- --- 004434 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004439 00000 ------------ C 0.25 0.80 0.53 A 0.75 0.20 0.47 0000 --- --- --- --- 004588 00000 ------------ - 0.00 0.04 0.02 + 1.00 0.96 0.98 0000 --- --- --- --- 004698 00000 ------------ C 0.91 0.93 0.92 T 0.09 0.07 0.08 0000 --- --- --- --- 004794 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004888 00000 ------------ T 0.69 0.98 0.83 C 0.31 0.02 0.17 0000 --- --- --- --- 004901 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004988 00000 ------------ A 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 005147 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005160 00000 ------------ C 0.89 0.93 0.91 T 0.11 0.07 0.09 0000 --- --- --- --- 005428 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 005576 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 005578 00000 ------------ G 0.89 0.93 0.91 A 0.11 0.07 0.09 0000 --- --- --- --- 005873 00000 ------------ T 0.72 0.98 0.85 G 0.28 0.02 0.15 0000 --- --- --- --- 005883 00000 ------------ C 0.83 0.98 0.90 T 0.17 0.02 0.10 0000 --- --- --- --- 005914 00000 ------------ C 0.80 0.91 0.86 T 0.20 0.09 0.14 0000 --- --- --- --- 006198 00000 ------------ C 0.88 0.93 0.90 G 0.12 0.07 0.10 0000 --- --- --- --- 006199 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006333 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006527 00000 ------------ A 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 006531 00000 ------------ - 0.06 0.07 0.06 + 0.94 0.93 0.94 0000 --- --- --- --- 006654 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 006813 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007044 00000 ------------ G 0.68 1.00 0.84 A 0.33 0.00 0.16 0000 --- --- --- --- 007244 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007276 00000 ------------ T 1.00 0.85 0.93 C 0.00 0.15 0.07 0000 --- --- --- --- 007401 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007420 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007421 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007479 00000 ------------ G 0.93 0.93 0.93 A 0.07 0.07 0.07 0000 --- --- --- --- 007595 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007644 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 007829 00000 ------------ T 0.91 0.95 0.93 C 0.09 0.05 0.07 0000 --- --- --- --- 008051 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 008072 00000 ------------ G 0.89 0.98 0.93 A 0.11 0.02 0.07 0000 --- --- --- --- 008348 00000 ------------ G 0.96 0.34 0.66 A 0.04 0.66 0.34 0000 --- --- --- --- 008368 00000 ------------ C 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 008588 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 008858 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008877 00000 ------------ G 0.28 0.80 0.54 A 0.72 0.20 0.46 0000 --- --- --- --- 008979 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 009325 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009354 00000 ------------ T 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 009516 00000 ------------ C 0.94 0.93 0.94 T 0.06 0.07 0.06 0000 --- --- --- --- 009525 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 009534 00000 ------------ A 0.83 0.87 0.85 G 0.17 0.13 0.15 0000 --- --- --- --- 009673 00000 ------------ G 0.90 0.93 0.91 A 0.10 0.07 0.09 0000 --- --- --- --- 009682 00000 ------------ T 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 009687 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009972 00000 ------------ G 0.96 0.93 0.95 T 0.04 0.07 0.05 0000 --- --- --- --- 010098 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 010516 00000 ------------ - 0.89 0.93 0.91 + 0.11 0.07 0.09 0000 --- --- --- --- 010751 00000 ------------ - 0.13 0.00 0.07 + 0.87 1.00 0.93 0000 --- --- --- --- 010876 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010890 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 010989 00000 ------------ T 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 010994 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 011024 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011064 00000 ------------ A 0.98 0.95 0.96 C 0.02 0.05 0.04 0000 --- --- --- --- 011134 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 011152 00000 ------------ A 0.95 0.95 0.95 C 0.05 0.05 0.05 0000 --- --- --- --- 011226 00000 ------------ A 0.24 0.78 0.50 G 0.76 0.23 0.50 0000 --- --- --- --- 011390 00000 ------------ T 0.67 0.98 0.83 G 0.33 0.02 0.17 0000 --- --- --- --- 011633 00000 ------------ A 0.25 0.78 0.51 G 0.75 0.22 0.49 0000 --- --- --- --- 011659 00000 ------------ C 0.67 0.98 0.82 T 0.33 0.02 0.18 0000 --- --- --- --- 011675 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 011686 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011710 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011763 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 011798 00000 ------------ A 0.88 0.97 0.92 G 0.12 0.03 0.08 0000 --- --- --- --- 011825 00000 ------------ G 0.94 0.97 0.95 T 0.06 0.03 0.05 0000 --- --- --- --- 011943 00000 ------------ C 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 011992 00000 ------------ T 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 012036 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 012070 00000 ------------ G 0.67 0.98 0.82 T 0.33 0.02 0.18 0000 --- --- --- --- 012087 00000 ------------ T 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 012117 00012 5' UTR G 0.83 0.91 0.87 C 0.17 0.09 0.13 0000 --- --- --- --- 012181 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012313 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012364 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012421 00000 ------------ A 0.88 0.98 0.92 G 0.12 0.02 0.08 0000 --- --- --- --- 012443 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012454 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012593 00000 ------------ C 0.93 0.97 0.95 T 0.07 0.03 0.05 0000 --- --- --- --- 012652 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012732* 012767 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012773 00000 ------------ C 0.70 0.97 0.82 T 0.30 0.03 0.18 0000 --- --- --- --- 012776 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012798 00000 ------------ G 0.80 0.93 0.87 A 0.20 0.07 0.13 0000 --- --- --- --- 012833 00000 ------------ A 0.78 0.98 0.88 G 0.22 0.02 0.12 0000 --- --- --- --- 012856 00000 ------------ T 0.75 0.87 0.81 A 0.25 0.13 0.19 0000 --- --- --- --- 012989* 013042 00110 NON-SYN A 0.27 0.83 0.54 C 0.73 0.17 0.46 0009 AAC ACC ASN(N) THR(T) 013164 00232 NON-SYN G 1.00 0.96 0.98 C 0.00 0.04 0.02 0050 GTC CTC VAL(V) LEU(L) 013181 00249 SYNON C 1.00 0.96 0.98 A 0.00 0.04 0.02 0055 GGC GGA GLY(G) GLY(G) 013326 00000 ------------ C 0.72 0.93 0.83 G 0.28 0.07 0.17 0000 --- --- --- --- 013436 00000 ------------ T 0.46 0.82 0.63 C 0.54 0.18 0.37 0000 --- --- --- --- 013593 00355 NON-SYN G 0.75 0.89 0.82 C 0.25 0.11 0.18 0091 GCT CCT ALA(A) PRO(P) 013604 00366 SYNON A 0.92 1.00 0.96 G 0.08 0.00 0.04 0094 AGA AGG ARG(R) ARG(R) 013635 00000 ------------ G 0.42 0.83 0.62 A 0.58 0.17 0.38 0000 --- --- --- --- 013659 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013660 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013661 00000 ------------ - 0.52 1.00 0.76 + 0.48 0.00 0.24 0000 --- --- --- --- 013679 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 013692 00000 ------------ G 1.00 0.67 0.84 A 0.00 0.33 0.16 0000 --- --- --- --- 013706 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 013712 00000 ------------ A 0.84 0.85 0.84 T 0.16 0.15 0.16 0000 --- --- --- --- 013807 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 013872 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014088 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 014114 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 014121 00000 ------------ G 0.90 0.93 0.92 C 0.10 0.07 0.08 0000 --- --- --- --- 014135 00000 ------------ G 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 014139 00000 ------------ G 0.76 1.00 0.88 T 0.24 0.00 0.12 0000 --- --- --- --- 014223 00000 ------------ C 0.95 0.98 0.96 T 0.05 0.02 0.04 0000 --- --- --- --- 014224 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 014254 00000 ------------ T 0.74 0.95 0.85 C 0.26 0.05 0.15 0000 --- --- --- --- 014304 00000 ------------ G 1.00 0.91 0.95 A 0.00 0.09 0.05 0000 --- --- --- --- 014605 00000 ------------ A 0.85 0.91 0.88 C 0.15 0.09 0.12 0000 --- --- --- --- 014851 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014897 00000 ------------ T 0.54 0.91 0.72 C 0.46 0.09 0.28 0000 --- --- --- --- 014965 00504 SYNON C 0.67 0.87 0.77 T 0.33 0.13 0.23 0140 TCC TCT SER(S) SER(S) 015151 00690 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0202 GAT GAC ASP(D) ASP(D) 015212 00751 NON-SYN C 0.65 0.89 0.76 A 0.35 0.11 0.24 0223 CAG AAG GLN(Q) LYS(K) 015320 00859 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015321 00860 3' UTR A 0.95 0.98 0.97 G 0.05 0.02 0.03 0000 --- --- --- --- 015407 00946 3' UTR C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 015444 00983 3' UTR C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 015567 01106 3' UTR C 0.77 0.93 0.85 T 0.23 0.07 0.15 0000 --- --- --- --- 015649 01188 3' UTR A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 015685 01224 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015729 01268 3' UTR A 0.42 0.80 0.61 C 0.58 0.20 0.39 0000 --- --- --- --- 015739 01278 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015801 01340 3' UTR G 0.42 0.80 0.61 A 0.58 0.20 0.39 0000 --- --- --- --- 015802 01341 3' UTR G 0.42 0.80 0.61 T 0.58 0.20 0.39 0000 --- --- --- --- 015849 01388 3' UTR C 0.77 0.93 0.85 G 0.23 0.07 0.15 0000 --- --- --- --- 016083 01622 3' UTR C 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 016209 01748 3' UTR G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 016535 02074 3' UTR A 0.87 0.93 0.90 C 0.13 0.07 0.10 0000 --- --- --- --- 016808 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016831 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 016899 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016998 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017019 00000 ------------ C 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 017114 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 017480 00000 ------------ C 0.89 0.98 0.93 T 0.11 0.02 0.07 0000 --- --- --- --- 017740 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017855 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001487: A 004588: TTTG 006531: A 010516: CAAA 010751: G 013661: C 014088: TTG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 012732 C 0.04 0.00 0.02 G 0.02 0.00 0.01 T 0.93 1.00 0.96 012989 A 0.59 0.90 0.74 G 0.37 0.10 0.24 T 0.04 0.00 0.02 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000414 00000 ------------ G 0.81 0.86 0.84 A 0.19 0.14 0.16 0000 --- --- --- --- 000770 00000 ------------ G 0.74 0.83 0.78 A 0.26 0.17 0.22 0000 --- --- --- --- 000780 00000 ------------ A 0.57 0.65 0.61 C 0.43 0.35 0.39 0000 --- --- --- --- 000859 00048 SYNON G 0.90 1.00 0.95 A 0.10 0.00 0.05 0016 ACG ACA THR(T) THR(T) 001033 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001397 00000 ------------ G 0.84 1.00 0.92 A 0.16 0.00 0.08 0000 --- --- --- --- 001422 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 001549 00000 ------------ + 0.92 0.84 0.88 - 0.08 0.16 0.12 0000 --- --- --- --- 001810 00000 ------------ C 0.88 0.53 0.72 A 0.12 0.47 0.28 0000 --- --- --- --- 002233 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002377 00392 NON-SYN T 0.65 0.50 0.58 C 0.35 0.50 0.42 0131 ATT ACT ILE(I) THR(T) 002471 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003333 00526 NON-SYN C 0.95 1.00 0.98 T 0.05 0.00 0.02 0176 CTC TTC LEU(L) PHE(F) 003958 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004541 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 004739 00000 ------------ + 0.96 1.00 0.98 - 0.04 0.00 0.02 0000 --- --- --- --- 004854 00000 ------------ G 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 004905 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004964 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005116 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005290 00815 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0272 CGC CAC ARG(R) HIS(H) 005318 00843 SYNON C 0.73 1.00 0.86 T 0.27 0.00 0.14 0281 GAC GAT ASP(D) ASP(D) 005347 00000 ------------ C 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 005360 00000 ------------ A 0.92 0.70 0.81 G 0.08 0.30 0.19 0000 --- --- --- --- 005365 00000 ------------ T 0.71 0.91 0.81 C 0.29 0.09 0.19 0000 --- --- --- --- 005825 00000 ------------ G 0.75 0.39 0.57 A 0.25 0.61 0.43 0000 --- --- --- --- 005970 00000 ------------ G 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 006550 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006593 00000 ------------ G 0.77 0.38 0.60 T 0.23 0.62 0.40 0000 --- --- --- --- 006729 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007096 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007334 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 007734 00000 ------------ + 1.00 0.98 0.99 - 0.00 0.02 0.01 0000 --- --- --- --- 007825 00000 ------------ T 0.72 1.00 0.85 C 0.28 0.00 0.15 0000 --- --- --- --- 007959 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008079 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008144 00000 ------------ T 0.73 1.00 0.86 A 0.27 0.00 0.14 0000 --- --- --- --- 008272 00000 ------------ C 0.72 1.00 0.86 T 0.28 0.00 0.14 0000 --- --- --- --- 008321 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 008476 00000 ------------ C 0.70 0.93 0.82 T 0.30 0.07 0.18 0000 --- --- --- --- 008730 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 009452 00000 ------------ G 0.77 0.39 0.58 C 0.23 0.61 0.42 0000 --- --- --- --- 009529 00000 ------------ A 0.74 1.00 0.87 G 0.26 0.00 0.13 0000 --- --- --- --- 009645 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009777 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009944 00000 ------------ + 0.02 0.00 0.01 - 0.98 1.00 0.99 0000 --- --- --- --- 009957 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010053 00000 ------------ C 0.72 1.00 0.85 G 0.28 0.00 0.15 0000 --- --- --- --- 010109 00000 ------------ A 0.72 0.91 0.81 G 0.28 0.09 0.19 0000 --- --- --- --- 010154 00000 ------------ C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 011145 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 011478 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011738 00000 ------------ A 0.96 0.98 0.97 G 0.04 0.02 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001549: G 004739: A 007734: C 009944: CAT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000346 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000572 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 000685 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 001347 00000 ------------ A 0.58 0.74 0.66 G 0.42 0.26 0.34 0000 --- --- --- --- 001487 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001525 00000 ------------ A 0.94 0.76 0.85 C 0.06 0.24 0.15 0000 --- --- --- --- 001626 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 002059 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 002222 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002262 00000 ------------ G 0.50 0.65 0.57 C 0.50 0.35 0.43 0000 --- --- --- --- 002426 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 002436 00000 ------------ A 0.50 0.67 0.59 G 0.50 0.33 0.41 0000 --- --- --- --- 002437 00000 ------------ T 0.85 0.83 0.84 G 0.15 0.17 0.16 0000 --- --- --- --- 002698 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002799 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002906 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002992 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 003037 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003054 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003164 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 003193 00000 ------------ A 1.00 0.89 0.95 G 0.00 0.11 0.05 0000 --- --- --- --- 003383 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003416 00000 ------------ A 0.81 0.70 0.76 G 0.19 0.30 0.24 0000 --- --- --- --- 003613 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003644 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 004565 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 004912 00000 ------------ G 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 005211 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005224 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 005236 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005306 00000 ------------ G 0.58 0.85 0.71 A 0.42 0.15 0.29 0000 --- --- --- --- 005387 00000 ------------ G 0.71 0.76 0.73 A 0.29 0.24 0.27 0000 --- --- --- --- 005494 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005560 00000 ------------ T 0.43 0.72 0.58 C 0.57 0.28 0.42 0000 --- --- --- --- 005753 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 005788 00000 ------------ A 0.38 0.87 0.62 C 0.62 0.13 0.38 0000 --- --- --- --- 005847 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 005854 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 006531 00440 NON-SYN C 1.00 0.87 0.94 A 0.00 0.13 0.06 0138 ACT AAT THR(T) ASN(N) 006624 00000 ------------ G 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 006701 00000 ------------ C 1.00 0.89 0.95 T 0.00 0.11 0.05 0000 --- --- --- --- 006783 00000 ------------ C 0.73 0.80 0.77 T 0.27 0.20 0.23 0000 --- --- --- --- 006882 00000 ------------ C 0.75 0.67 0.71 G 0.25 0.33 0.29 0000 --- --- --- --- 007011 00584 NON-SYN G 0.98 0.78 0.88 A 0.02 0.22 0.12 0186 AGC AAC SER(S) ASN(N) 007235 00000 ------------ - 0.75 0.78 0.77 + 0.25 0.22 0.23 0000 --- --- --- --- 007378 00744 3' UTR G 0.77 0.78 0.78 A 0.23 0.22 0.22 0000 --- --- --- --- 007428 00794 3' UTR C 0.82 0.69 0.75 T 0.18 0.31 0.25 0000 --- --- --- --- 007437 00803 3' UTR G 0.97 0.81 0.88 C 0.03 0.19 0.12 0000 --- --- --- --- 007471 00837 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007541 00000 ------------ C 0.62 0.60 0.61 T 0.38 0.40 0.39 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000685: A 007235: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000104 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 000232 00000 ------------ G 0.56 0.85 0.70 C 0.44 0.15 0.30 0000 --- --- --- --- 000249 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 000275 00000 ------------ C 0.69 0.91 0.80 T 0.31 0.09 0.20 0000 --- --- --- --- 000333 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000814 00000 ------------ T 0.93 0.93 0.93 C 0.07 0.07 0.07 0000 --- --- --- --- 001395 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 001490 00000 ------------ G 0.98 0.73 0.86 A 0.02 0.27 0.14 0000 --- --- --- --- 001523 00000 ------------ A 0.69 0.93 0.80 G 0.31 0.07 0.20 0000 --- --- --- --- 001549 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001582 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001755 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 002020 00000 ------------ G 0.73 0.98 0.85 A 0.27 0.02 0.15 0000 --- --- --- --- 002228 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 002324 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002555 00000 ------------ A 0.63 0.91 0.77 G 0.37 0.09 0.23 0000 --- --- --- --- 003144 00000 ------------ C 0.88 0.93 0.90 A 0.12 0.07 0.10 0000 --- --- --- --- 003270 00000 ------------ G 0.60 0.91 0.76 T 0.40 0.09 0.24 0000 --- --- --- --- 003286 00000 ------------ G 0.62 0.91 0.77 A 0.38 0.09 0.23 0000 --- --- --- --- 003379 00000 ------------ T 0.87 0.93 0.90 C 0.13 0.07 0.10 0000 --- --- --- --- 003686 00000 ------------ G 0.80 0.54 0.66 T 0.20 0.46 0.34 0000 --- --- --- --- 003904 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 003928 00000 ------------ C 0.77 0.93 0.85 T 0.23 0.07 0.15 0000 --- --- --- --- 004125 00000 ------------ C 0.90 0.70 0.80 T 0.10 0.30 0.20 0000 --- --- --- --- 004326 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 004348 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 004506 00000 ------------ T 0.73 0.89 0.81 A 0.27 0.11 0.19 0000 --- --- --- --- 004564 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004975 00135 NON-SYN T 0.48 0.57 0.52 C 0.52 0.43 0.48 0031 ATG ACG MET(M) THR(T) 005164 00000 ------------ G 0.71 0.98 0.84 T 0.29 0.02 0.16 0000 --- --- --- --- 005477 00000 ------------ - 0.25 0.02 0.13 + 0.75 0.98 0.87 0000 --- --- --- --- 005716 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 005819 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 005866 00000 ------------ G 0.68 0.89 0.79 A 0.32 0.11 0.21 0000 --- --- --- --- 006189 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006231 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 006741 00000 ------------ C 0.89 0.57 0.73 T 0.11 0.43 0.27 0000 --- --- --- --- 006788 00000 ------------ T 0.63 0.91 0.77 C 0.37 0.09 0.23 0000 --- --- --- --- 006819 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007075 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007144 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 007448 00000 ------------ G 0.90 0.93 0.91 C 0.10 0.07 0.09 0000 --- --- --- --- 007468 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007665 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 007810 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 007850 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007867 00000 ------------ C 0.93 0.98 0.96 T 0.07 0.02 0.04 0000 --- --- --- --- 007927 00000 ------------ C 0.93 0.98 0.96 G 0.07 0.02 0.04 0000 --- --- --- --- 007928 00000 ------------ A 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 008015 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 008074 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 008081 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008466 00000 ------------ A 0.60 0.91 0.76 G 0.40 0.09 0.24 0000 --- --- --- --- 008578 00000 ------------ A 0.60 0.91 0.76 G 0.40 0.09 0.24 0000 --- --- --- --- 008762 00340 SYNON G 0.92 0.98 0.95 A 0.08 0.02 0.05 0099 AAG AAA LYS(K) LYS(K) 008878 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008947 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009090 00410 NON-SYN C 1.00 0.98 0.99 G 0.00 0.02 0.01 0123 CTG GTG LEU(L) VAL(V) 009577 00580 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0179 AAC AAT ASN(N) ASN(N) 009578 00581 NON-SYN G 1.00 0.57 0.78 A 0.00 0.43 0.22 0180 GCA ACA ALA(A) THR(T) 009613 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 009616 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009720 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 009777 00000 ------------ A 0.61 0.61 0.61 G 0.39 0.39 0.39 0000 --- --- --- --- 010171 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 010265 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010407 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 010480 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010726 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 010878 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011210 00000 ------------ C 0.91 0.59 0.75 T 0.09 0.41 0.25 0000 --- --- --- --- 011266 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011319 00000 ------------ C 0.91 0.57 0.74 G 0.09 0.43 0.26 0000 --- --- --- --- 011350 00000 ------------ T 0.89 0.98 0.93 C 0.11 0.02 0.07 0000 --- --- --- --- 011575 00000 ------------ - 0.09 0.42 0.24 + 0.91 0.58 0.76 0000 --- --- --- --- 011739 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 011787 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011993 00000 ------------ T 0.71 0.89 0.80 A 0.29 0.11 0.20 0000 --- --- --- --- 012064 00000 ------------ T 0.62 0.41 0.52 C 0.38 0.59 0.48 0000 --- --- --- --- 012225 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 012262 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012267 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012511 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 012534 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 012579 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 012653 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013134 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013205 00000 ------------ T 0.92 0.57 0.75 C 0.08 0.43 0.25 0000 --- --- --- --- 013207 00000 ------------ G 0.75 0.93 0.84 T 0.25 0.07 0.16 0000 --- --- --- --- 013298 00000 ------------ - 0.25 0.07 0.16 + 0.75 0.93 0.84 0000 --- --- --- --- 013434 00911 NON-SYN T 0.98 0.93 0.96 A 0.02 0.07 0.04 0290 TCT ACT SER(S) THR(T) 013484 00961 SYNON T 0.71 0.89 0.80 C 0.29 0.11 0.20 0306 GCT GCC ALA(A) ALA(A) 013491 00968 NON-SYN G 0.81 1.00 0.90 A 0.19 0.00 0.10 0309 GAG AAG GLU(E) LYS(K) 013834 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014029 00000 ------------ G 0.91 0.57 0.74 A 0.09 0.43 0.26 0000 --- --- --- --- 014105 00000 ------------ T 0.93 0.57 0.75 G 0.07 0.43 0.25 0000 --- --- --- --- 014125 00000 ------------ C 0.93 0.96 0.94 G 0.07 0.04 0.06 0000 --- --- --- --- 014136 00000 ------------ - 0.92 0.57 0.74 + 0.08 0.43 0.26 0000 --- --- --- --- 014178 00000 ------------ C 0.92 0.57 0.74 T 0.08 0.43 0.26 0000 --- --- --- --- 014383 00000 ------------ T 0.92 0.57 0.74 C 0.08 0.43 0.26 0000 --- --- --- --- 014448 00000 ------------ A 0.90 0.46 0.68 T 0.10 0.54 0.32 0000 --- --- --- --- 014449 00000 ------------ G 0.90 0.46 0.68 T 0.10 0.54 0.32 0000 --- --- --- --- 014450 00000 ------------ A 0.90 0.46 0.68 C 0.10 0.54 0.32 0000 --- --- --- --- 014451 00000 ------------ A 0.90 0.46 0.68 T 0.10 0.54 0.32 0000 --- --- --- --- 014473 00000 ------------ C 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 014560 00000 ------------ T 0.92 0.57 0.74 C 0.08 0.43 0.26 0000 --- --- --- --- 015211 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 015311 00000 ------------ - 0.92 0.57 0.74 + 0.08 0.43 0.26 0000 --- --- --- --- 015378 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 015390 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015411 00000 ------------ G 0.94 0.74 0.84 A 0.06 0.26 0.16 0000 --- --- --- --- 015567 00000 ------------ G 0.95 0.74 0.84 A 0.05 0.26 0.16 0000 --- --- --- --- 015921 00000 ------------ - 0.08 0.39 0.23 + 0.92 0.61 0.77 0000 --- --- --- --- 016096 00000 ------------ T 0.64 0.64 0.64 C 0.36 0.36 0.36 0000 --- --- --- --- 016111 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 016272 00000 ------------ T 0.92 0.57 0.75 C 0.08 0.43 0.25 0000 --- --- --- --- 016354 00000 ------------ C 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 016414 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 016434 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016465 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 016545 00000 ------------ A 0.90 0.50 0.70 C 0.10 0.50 0.30 0000 --- --- --- --- 016951 00000 ------------ G 0.78 0.93 0.86 A 0.23 0.07 0.14 0000 --- --- --- --- 017081 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 017086 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 017105 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017691 00000 ------------ G 0.87 0.93 0.90 A 0.13 0.07 0.10 0000 --- --- --- --- 017855 00000 ------------ G 0.65 1.00 0.82 A 0.35 0.00 0.18 0000 --- --- --- --- 018802 00000 ------------ - 0.21 0.57 0.41 + 0.79 0.43 0.59 0000 --- --- --- --- 018943 00000 ------------ A 0.91 0.57 0.74 G 0.09 0.43 0.26 0000 --- --- --- --- 019131 00000 ------------ A 0.87 0.98 0.92 G 0.13 0.02 0.08 0000 --- --- --- --- 019329 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 019365 00000 ------------ T 0.90 0.70 0.80 C 0.10 0.30 0.20 0000 --- --- --- --- 019429 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 019483 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019528 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 019759 00000 ------------ C 0.93 0.55 0.74 T 0.07 0.45 0.26 0000 --- --- --- --- 019925 00000 ------------ C 0.88 0.69 0.79 T 0.12 0.31 0.21 0000 --- --- --- --- 019967 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019984 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 020045 00000 ------------ T 0.59 0.64 0.61 G 0.41 0.36 0.39 0000 --- --- --- --- 020180 00000 ------------ T 0.94 0.96 0.95 C 0.06 0.04 0.05 0000 --- --- --- --- 020225 00000 ------------ G 0.90 0.70 0.80 A 0.10 0.30 0.20 0000 --- --- --- --- 020267 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020269 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020271 00000 ------------ C 0.92 0.57 0.74 T 0.08 0.43 0.26 0000 --- --- --- --- 020320 00000 ------------ G 0.92 0.57 0.75 T 0.08 0.43 0.25 0000 --- --- --- --- 020402 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 020525 00000 ------------ G 0.94 0.96 0.95 A 0.06 0.04 0.05 0000 --- --- --- --- 020920 00000 ------------ C 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 020933 00000 ------------ G 0.91 0.57 0.74 C 0.09 0.43 0.26 0000 --- --- --- --- 020946 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 021010 00000 ------------ T 0.80 0.50 0.65 G 0.20 0.50 0.35 0000 --- --- --- --- 021298 00000 ------------ T 0.90 0.98 0.94 C 0.10 0.02 0.06 0000 --- --- --- --- 021330 00000 ------------ A 0.78 0.48 0.62 C 0.23 0.52 0.38 0000 --- --- --- --- 021482 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021561 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021564 00000 ------------ A 0.90 0.57 0.73 C 0.10 0.43 0.27 0000 --- --- --- --- 021655 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 021749 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 021765 00000 ------------ G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 021794 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021969 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 022527 00000 ------------ - 0.80 0.54 0.67 + 0.20 0.46 0.33 0000 --- --- --- --- 022575 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 022635 00000 ------------ C 0.92 0.57 0.74 T 0.08 0.43 0.26 0000 --- --- --- --- 022683 00000 ------------ A 0.78 0.48 0.63 G 0.22 0.52 0.37 0000 --- --- --- --- 022701 00000 ------------ C 0.59 0.63 0.61 G 0.41 0.37 0.39 0000 --- --- --- --- 022703 00000 ------------ C 0.91 0.57 0.74 A 0.09 0.43 0.26 0000 --- --- --- --- 022828 00000 ------------ G 0.93 0.96 0.95 A 0.07 0.04 0.05 0000 --- --- --- --- 022957 00000 ------------ T 0.89 0.70 0.79 G 0.11 0.30 0.21 0000 --- --- --- --- 023226 00000 ------------ C 0.90 0.95 0.93 T 0.10 0.05 0.07 0000 --- --- --- --- 023262 00000 ------------ C 0.93 0.67 0.80 G 0.07 0.33 0.20 0000 --- --- --- --- 023265 00000 ------------ - 0.65 0.93 0.80 + 0.35 0.07 0.20 0000 --- --- --- --- 023384 00000 ------------ C 0.97 0.93 0.95 G 0.03 0.07 0.05 0000 --- --- --- --- 023405 00000 ------------ - 0.05 0.02 0.03 + 0.95 0.98 0.97 0000 --- --- --- --- 023470 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002228: T 005477: A 006189: ACGTGAATGGGA 006231: A 011575: GA 013298: TGAC 014136: ATC 015311: TGAAACCCCTGTCAGGTGAAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGCGGTGGTGGACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCTGGGAGGCGGATCATGCTGTCAGG 015921: T 017081: CCCTCTG 018802: T 022527: ATTTTT 022575: AG 023265: G 023405: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000164 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000241 00000 ------------ G 1.00 0.70 0.85 A 0.00 0.30 0.15 0000 --- --- --- --- 000250 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000257 00000 ------------ G 0.98 0.70 0.84 A 0.02 0.30 0.16 0000 --- --- --- --- 000264 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000269 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000404 00000 ------------ G 0.98 0.48 0.73 T 0.02 0.52 0.27 0000 --- --- --- --- 000440 00000 ------------ A 0.83 0.43 0.64 C 0.17 0.57 0.36 0000 --- --- --- --- 000648 00000 ------------ C 0.96 0.50 0.74 G 0.04 0.50 0.26 0000 --- --- --- --- 000656 00000 ------------ A 0.81 0.91 0.86 T 0.19 0.09 0.14 0000 --- --- --- --- 000666 00000 ------------ C 0.44 0.84 0.63 T 0.56 0.16 0.37 0000 --- --- --- --- 000740 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001747 00000 ------------ C 0.58 0.89 0.73 G 0.42 0.11 0.27 0000 --- --- --- --- 001997 00024 5' UTR G 0.69 0.91 0.80 A 0.31 0.09 0.20 0000 --- --- --- --- 002197 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 002418 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 002598 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 003025 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 003461 00000 ------------ C 0.72 1.00 0.90 A 0.28 0.00 0.10 0000 --- --- --- --- 003600 00000 ------------ G 0.89 0.40 0.58 A 0.11 0.60 0.42 0000 --- --- --- --- 004322 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004496 00000 ------------ A 0.91 0.32 0.59 G 0.09 0.68 0.41 0000 --- --- --- --- 004608 00000 ------------ G 0.93 0.35 0.65 A 0.07 0.65 0.35 0000 --- --- --- --- 004706 00000 ------------ G 0.90 0.97 0.94 A 0.10 0.03 0.06 0000 --- --- --- --- 004714 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 004887 00000 ------------ T 0.93 0.35 0.62 C 0.07 0.65 0.38 0000 --- --- --- --- 005061 00000 ------------ C 0.93 0.35 0.62 T 0.07 0.65 0.38 0000 --- --- --- --- 005153 00000 ------------ C 0.93 0.34 0.63 A 0.07 0.66 0.37 0000 --- --- --- --- 005270 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 005367 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005368 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005373 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005858 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 005898 00000 ------------ T 0.70 0.91 0.81 C 0.30 0.09 0.19 0000 --- --- --- --- 006003 00000 ------------ C 0.93 0.34 0.64 T 0.07 0.66 0.36 0000 --- --- --- --- 006013 00000 ------------ G 0.93 0.34 0.64 T 0.07 0.66 0.36 0000 --- --- --- --- 006045 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006130 00000 ------------ A 0.93 0.33 0.65 G 0.07 0.67 0.35 0000 --- --- --- --- 006191 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 006269 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 006317 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006460 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 006527 00000 ------------ T 0.87 1.00 0.92 C 0.13 0.00 0.08 0000 --- --- --- --- 006543 00000 ------------ T 0.87 1.00 0.92 C 0.13 0.00 0.08 0000 --- --- --- --- 006625 00000 ------------ A 0.93 0.34 0.69 T 0.07 0.66 0.31 0000 --- --- --- --- 006704 00000 ------------ C 0.94 0.34 0.70 G 0.06 0.66 0.30 0000 --- --- --- --- 006770 00000 ------------ C 0.94 0.34 0.70 T 0.06 0.66 0.30 0000 --- --- --- --- 006840 00000 ------------ G 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 006950 00000 ------------ G 0.94 0.34 0.70 T 0.06 0.66 0.30 0000 --- --- --- --- 006953 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007160 00000 ------------ C 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 007170 00000 ------------ C 0.94 0.34 0.70 G 0.06 0.66 0.30 0000 --- --- --- --- 007518 00000 ------------ G 0.94 0.35 0.65 A 0.06 0.65 0.35 0000 --- --- --- --- 007624 00000 ------------ T 0.94 0.35 0.65 C 0.06 0.65 0.35 0000 --- --- --- --- 007726 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 007989 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 007995 00000 ------------ A 0.73 0.91 0.82 G 0.27 0.09 0.18 0000 --- --- --- --- 008002 00000 ------------ A 0.93 0.35 0.64 G 0.07 0.65 0.36 0000 --- --- --- --- 008230 00295 NON-SYN G 0.72 0.91 0.82 A 0.28 0.09 0.18 0044 GAA AAA GLU(E) LYS(K) 008660 00000 ------------ G 0.86 0.34 0.60 C 0.14 0.66 0.40 0000 --- --- --- --- 008666 00000 ------------ G 0.98 0.75 0.86 A 0.02 0.25 0.14 0000 --- --- --- --- 008946 00468 SYNON G 0.91 1.00 0.96 A 0.09 0.00 0.04 0101 GTG GTA VAL(V) VAL(V) 009195 00000 ------------ C 0.92 0.35 0.64 G 0.08 0.65 0.36 0000 --- --- --- --- 009200 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009214 00000 ------------ C 0.92 0.35 0.64 T 0.08 0.65 0.36 0000 --- --- --- --- 009298 00000 ------------ A 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 009365 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009381 00000 ------------ A 0.92 0.36 0.65 G 0.08 0.64 0.35 0000 --- --- --- --- 009511 00000 ------------ T 0.92 0.35 0.64 C 0.08 0.65 0.36 0000 --- --- --- --- 009735 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009757 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009935 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 010029 00000 ------------ T 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 010183 00000 ------------ G 0.91 0.34 0.63 A 0.09 0.66 0.37 0000 --- --- --- --- 010275 00000 ------------ A 0.91 0.34 0.63 G 0.09 0.66 0.37 0000 --- --- --- --- 010418 00000 ------------ - 0.08 0.64 0.35 + 0.92 0.36 0.65 0000 --- --- --- --- 010605 00000 ------------ A 0.92 0.33 0.67 G 0.08 0.67 0.33 0000 --- --- --- --- 010637 00000 ------------ C 0.92 0.34 0.66 T 0.08 0.66 0.34 0000 --- --- --- --- 010681 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 010861 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010943 00000 ------------ C 0.92 0.36 0.66 G 0.08 0.64 0.34 0000 --- --- --- --- 011124 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 011182 00000 ------------ C 0.92 0.35 0.64 T 0.08 0.65 0.36 0000 --- --- --- --- 011915 00000 ------------ C 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 011922 00000 ------------ - 0.00 0.07 0.03 + 1.00 0.93 0.97 0000 --- --- --- --- 012842 00000 ------------ T 0.91 0.38 0.65 C 0.09 0.62 0.35 0000 --- --- --- --- 013266 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 013406 00000 ------------ A 0.79 0.33 0.58 C 0.21 0.67 0.42 0000 --- --- --- --- 013507 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013634 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013873 00000 ------------ G 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 013925 00000 ------------ T 0.86 0.36 0.61 C 0.14 0.64 0.39 0000 --- --- --- --- 014085 00000 ------------ T 0.98 0.72 0.84 C 0.02 0.28 0.16 0000 --- --- --- --- 014353 00753 SYNON G 0.64 0.74 0.69 A 0.36 0.26 0.31 0196 CCG CCA PRO(P) PRO(P) 014714 00000 ------------ - 0.88 0.35 0.62 + 0.12 0.65 0.38 0000 --- --- --- --- 014716 00000 ------------ G 0.50 0.91 0.70 T 0.50 0.09 0.30 0000 --- --- --- --- 014787 00000 ------------ C 0.65 0.74 0.69 T 0.35 0.26 0.31 0000 --- --- --- --- 014826 00000 ------------ T 0.48 0.91 0.69 C 0.52 0.09 0.31 0000 --- --- --- --- 015038 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 015043 00000 ------------ G 0.48 0.91 0.69 A 0.52 0.09 0.31 0000 --- --- --- --- 015070 00000 ------------ G 0.98 0.76 0.87 A 0.02 0.24 0.13 0000 --- --- --- --- 015073 00000 ------------ A 0.65 0.74 0.69 G 0.35 0.26 0.31 0000 --- --- --- --- 015103 00000 ------------ C 0.65 0.74 0.69 T 0.35 0.26 0.31 0000 --- --- --- --- 015349 00000 ------------ T 0.65 0.74 0.69 C 0.35 0.26 0.31 0000 --- --- --- --- 015353 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 015368 00000 ------------ T 0.65 0.74 0.69 C 0.35 0.26 0.31 0000 --- --- --- --- 015585 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015687 00000 ------------ C 0.88 0.34 0.62 G 0.12 0.66 0.38 0000 --- --- --- --- 015706 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 015720 00000 ------------ C 0.73 0.91 0.82 T 0.27 0.09 0.18 0000 --- --- --- --- 015722 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015796 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015797 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015798 00000 ------------ A 0.79 0.34 0.58 G 0.21 0.66 0.42 0000 --- --- --- --- 016006 00000 ------------ T 0.67 0.34 0.51 C 0.33 0.66 0.49 0000 --- --- --- --- 016053 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016076 00000 ------------ A 0.79 0.34 0.58 G 0.21 0.66 0.42 0000 --- --- --- --- 016391 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016465 00000 ------------ T 0.88 0.35 0.62 C 0.12 0.65 0.38 0000 --- --- --- --- 016515 00000 ------------ T 0.42 0.67 0.54 A 0.58 0.33 0.46 0000 --- --- --- --- 016554 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 016567 00000 ------------ G 0.88 0.35 0.62 A 0.12 0.65 0.38 0000 --- --- --- --- 016881 00000 ------------ T 0.42 0.66 0.53 C 0.58 0.34 0.47 0000 --- --- --- --- 017078 00958 SYNON T 1.00 0.97 0.99 C 0.00 0.03 0.01 0265 TTG CTG LEU(L) LEU(L) 017095 00975 SYNON G 1.00 0.95 0.98 A 0.00 0.05 0.02 0270 GCG GCA ALA(A) ALA(A) 017180 00000 ------------ T 0.91 0.97 0.94 C 0.09 0.03 0.06 0000 --- --- --- --- 017340 01003 NON-SYN G 0.86 0.35 0.62 A 0.14 0.65 0.38 0280 GAC AAC ASP(D) ASN(N) 017599 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 017810 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018096 00000 ------------ T 0.92 0.93 0.92 G 0.08 0.07 0.08 0000 --- --- --- --- 018425 00000 ------------ A 0.66 0.36 0.51 G 0.34 0.64 0.49 0000 --- --- --- --- 018508 00000 ------------ G 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 018535 00000 ------------ G 0.98 0.71 0.85 C 0.02 0.29 0.15 0000 --- --- --- --- 018710 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 018849 00000 ------------ A 0.82 0.36 0.59 G 0.18 0.64 0.41 0000 --- --- --- --- 019090 00000 ------------ A 0.82 0.36 0.59 G 0.18 0.64 0.41 0000 --- --- --- --- 019233 00000 ------------ A 0.84 0.36 0.60 G 0.16 0.64 0.40 0000 --- --- --- --- 019238 00000 ------------ T 0.84 0.36 0.60 C 0.16 0.64 0.40 0000 --- --- --- --- 019582 00000 ------------ G 0.67 0.36 0.52 C 0.33 0.64 0.48 0000 --- --- --- --- 019668 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 019845 00000 ------------ G 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 020231 00000 ------------ C 0.97 0.81 0.88 T 0.03 0.19 0.12 0000 --- --- --- --- 020308 00000 ------------ G 0.97 0.42 0.67 C 0.03 0.58 0.33 0000 --- --- --- --- 020466 00000 ------------ - 0.14 0.00 0.07 + 0.86 1.00 0.93 0000 --- --- --- --- 020530 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 020553 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 020640 00000 ------------ - 0.87 0.95 0.91 + 0.13 0.05 0.09 0000 --- --- --- --- 021449 00000 ------------ A 0.97 0.65 0.80 G 0.03 0.35 0.20 0000 --- --- --- --- 021475 00000 ------------ G 0.83 0.97 0.91 C 0.17 0.03 0.09 0000 --- --- --- --- 021585 00000 ------------ C 0.86 0.97 0.92 T 0.14 0.03 0.08 0000 --- --- --- --- 021728 00000 ------------ T 0.86 0.97 0.92 G 0.14 0.03 0.08 0000 --- --- --- --- 021889 00000 ------------ G 0.85 0.70 0.78 A 0.15 0.30 0.22 0000 --- --- --- --- 022387 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 022420 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022433 00000 ------------ - 0.13 0.00 0.07 + 0.87 1.00 0.93 0000 --- --- --- --- 022512 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022699 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 022986 00000 ------------ A 0.95 0.75 0.85 G 0.05 0.25 0.15 0000 --- --- --- --- 023000 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 023271 00000 ------------ C 0.92 0.98 0.94 T 0.08 0.02 0.06 0000 --- --- --- --- 023422 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 024021 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 024046 00000 ------------ C 0.76 0.91 0.84 T 0.24 0.09 0.16 0000 --- --- --- --- 024141 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024392 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024617 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024913 00000 ------------ C 0.54 0.92 0.71 T 0.46 0.08 0.29 0000 --- --- --- --- 024952 00000 ------------ G 0.75 1.00 0.86 A 0.25 0.00 0.14 0000 --- --- --- --- 025121 00000 ------------ T 0.56 0.74 0.64 C 0.44 0.26 0.36 0000 --- --- --- --- 026122 00000 ------------ G 0.98 0.76 0.87 A 0.02 0.24 0.13 0000 --- --- --- --- 026461 00000 ------------ A 0.41 0.76 0.59 G 0.59 0.24 0.41 0000 --- --- --- --- 026577 00000 ------------ C 0.45 0.71 0.57 G 0.55 0.29 0.43 0000 --- --- --- --- 026794 00000 ------------ G 0.91 1.00 0.94 A 0.09 0.00 0.06 0000 --- --- --- --- 026858 00000 ------------ G 0.91 1.00 0.94 A 0.09 0.00 0.06 0000 --- --- --- --- 026936 00000 ------------ - 0.13 0.46 0.24 + 0.87 0.54 0.76 0000 --- --- --- --- 027025 00000 ------------ A 0.54 0.46 0.51 G 0.46 0.54 0.49 0000 --- --- --- --- 027137 00000 ------------ G 0.98 0.54 0.83 A 0.02 0.46 0.17 0000 --- --- --- --- 027323 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027417 00000 ------------ T 0.88 0.32 0.61 G 0.12 0.68 0.39 0000 --- --- --- --- 027546 00000 ------------ G 0.67 0.91 0.78 A 0.33 0.09 0.22 0000 --- --- --- --- 027668 01260 SYNON T 1.00 0.95 0.98 C 0.00 0.05 0.02 0365 AGT AGC SER(S) SER(S) 028621 02213 3' UTR C 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 028723 02315 3' UTR T 0.87 0.33 0.60 A 0.13 0.67 0.40 0000 --- --- --- --- 028859 02451 3' UTR T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 029023 02615 3' UTR T 0.70 0.91 0.80 C 0.30 0.09 0.20 0000 --- --- --- --- 029110 02702 3' UTR T 0.55 0.76 0.66 C 0.45 0.24 0.34 0000 --- --- --- --- 029166 00000 ------------ - 0.43 0.09 0.26 + 0.57 0.91 0.74 0000 --- --- --- --- 029176 00000 ------------ - 0.59 0.74 0.68 + 0.41 0.26 0.32 0000 --- --- --- --- 029561 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 029583 00000 ------------ A 0.98 0.76 0.88 T 0.02 0.24 0.12 0000 --- --- --- --- 029584 00000 ------------ - 0.61 0.90 0.75 + 0.39 0.10 0.25 0000 --- --- --- --- 029868 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002197: CTGGTAGA 006460: ATCTTT 010418: C 011922: TT 014714: TGGGGG 020466: GTT 020553: GCCTCCCGGGTCCCGGTTCAAGCAATTCTTCTGCCTCA 020640: T 022387: AT 022433: T 026936: T 029166: CAAAACAAAA 029176: CAAAA 029584: AATT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000060 00000 ------------ G 0.96 0.96 0.96 A 0.04 0.04 0.04 0000 --- --- --- --- 000255 00000 ------------ G 0.83 0.74 0.79 A 0.17 0.26 0.21 0000 --- --- --- --- 000303 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000586 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001002 00000 ------------ - 1.00 0.98 0.99 + 0.00 0.02 0.01 0000 --- --- --- --- 001466 00000 ------------ T 0.50 0.72 0.61 C 0.50 0.28 0.39 0000 --- --- --- --- 001833 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001906 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002274 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 002642 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002735 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 002792 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002835 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002855 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002893 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003430 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 003744 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004515 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 004546 00000 ------------ T 0.84 1.00 0.91 C 0.16 0.00 0.09 0000 --- --- --- --- 004645 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 004646 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 004801 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 004932 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 005168 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005394 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 005405 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008021 00000 ------------ G 1.00 0.53 0.74 A 0.00 0.47 0.26 0000 --- --- --- --- 008142 00000 ------------ A 0.31 0.69 0.52 C 0.69 0.31 0.48 0000 --- --- --- --- 008324 00000 ------------ - 0.73 0.91 0.82 + 0.27 0.09 0.18 0000 --- --- --- --- 008448 00227 NON-SYN A 1.00 0.98 0.99 C 0.00 0.02 0.01 0038 GAC GCC ASP(D) ALA(A) 008501 00280 NON-SYN A 0.85 0.98 0.91 G 0.15 0.02 0.09 0056 AAG GAG LYS(K) GLU(E) 008832 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008952 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 008964 00000 ------------ C 0.88 0.93 0.90 T 0.12 0.07 0.10 0000 --- --- --- --- 008993 00000 ------------ C 0.88 0.98 0.93 T 0.12 0.02 0.07 0000 --- --- --- --- 009094 00000 ------------ A 0.88 0.93 0.90 G 0.12 0.07 0.10 0000 --- --- --- --- 009470 00000 ------------ C 0.62 0.74 0.68 T 0.38 0.26 0.32 0000 --- --- --- --- 010342 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010355 00000 ------------ G 0.65 0.85 0.74 A 0.35 0.15 0.26 0000 --- --- --- --- 010391 00000 ------------ - 0.85 0.98 0.91 + 0.15 0.02 0.09 0000 --- --- --- --- 010400 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 010466 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 011023 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 011298 00000 ------------ A 0.81 0.50 0.66 G 0.19 0.50 0.34 0000 --- --- --- --- 011503 01038 SYNON G 0.94 1.00 0.97 A 0.06 0.00 0.03 0308 CTG CTA LEU(L) LEU(L) 011762 00000 ------------ C 0.60 0.80 0.70 T 0.40 0.20 0.30 0000 --- --- --- --- 012050 01353 SYNON C 0.98 0.98 0.98 T 0.02 0.02 0.02 0413 TAC TAT TYR(Y) TYR(Y) 012060 01363 SYNON C 1.00 0.96 0.98 T 0.00 0.04 0.02 0417 CTG TTG LEU(L) LEU(L) 012312 01437 SYNON G 1.00 0.93 0.97 A 0.00 0.07 0.03 0441 CTG CTA LEU(L) LEU(L) 012497 00000 ------------ A 0.71 0.76 0.73 G 0.29 0.24 0.27 0000 --- --- --- --- 012625 01636 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0508 GAG AAG GLU(E) LYS(K) 012795 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 013105 00000 ------------ C 0.98 0.63 0.81 T 0.02 0.37 0.19 0000 --- --- --- --- 013121 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013435 00000 ------------ A 0.35 0.67 0.51 G 0.65 0.33 0.49 0000 --- --- --- --- 013698 00000 ------------ - 0.00 0.04 0.02 + 1.00 0.96 0.98 0000 --- --- --- --- 014376 01884 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0590 AAG AAA LYS(K) LYS(K) 014639 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 014644 00000 ------------ G 1.00 0.87 0.94 A 0.00 0.13 0.06 0000 --- --- --- --- 014860 01992 SYNON T 0.92 1.00 0.96 C 0.08 0.00 0.04 0626 GAT GAC ASP(D) ASP(D) 014906 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 015479 02067 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0651 CAC CAT HIS(H) HIS(H) 016750 02214 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0700 TCC TCT SER(S) SER(S) 018576 02511 SYNON G 1.00 0.98 0.99 A 0.00 0.02 0.01 0799 TCG TCA SER(S) SER(S) 018849 02698 NON-SYN G 0.87 1.00 0.93 A 0.13 0.00 0.07 0862 GTC ATC VAL(V) ILE(I) 019573 02802 SYNON T 0.90 1.00 0.95 C 0.10 0.00 0.05 0896 GAT GAC ASP(D) ASP(D) 019891 03120 3' UTR G 0.94 0.95 0.95 A 0.06 0.05 0.05 0000 --- --- --- --- 019954 03183 3' UTR C 0.48 0.74 0.60 A 0.52 0.26 0.40 0000 --- --- --- --- 019970 03199 3' UTR G 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 020415 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 020595 00000 ------------ - 0.97 1.00 0.99 + 0.03 0.00 0.01 0000 --- --- --- --- 020725 00000 ------------ - 0.25 0.00 0.11 + 0.75 1.00 0.89 0000 --- --- --- --- 021240 00000 ------------ A 0.91 0.98 0.94 T 0.09 0.02 0.06 0000 --- --- --- --- 022092 00000 ------------ A 0.55 1.00 0.78 G 0.45 0.00 0.22 0000 --- --- --- --- 022187 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001002: A 002274: C 008324: G 010391: G 013698: CCAGCCT 020415: T 020595: T 020725: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000069 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000301 00000 ------------ T 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 000370 00000 ------------ C 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 000472 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000605 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 000740 00074 5' UTR A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001254 00000 ------------ C 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 001551 00000 ------------ A 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 001784 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002056 00000 ------------ C 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 002216 00000 ------------ A 0.75 1.00 0.87 T 0.25 0.00 0.13 0000 --- --- --- --- 003353 00000 ------------ - 0.25 0.09 0.17 + 0.75 0.91 0.83 0000 --- --- --- --- 003397 00000 ------------ G 0.77 1.00 0.88 A 0.23 0.00 0.12 0000 --- --- --- --- 003482 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003563 00000 ------------ - 0.98 0.98 0.98 + 0.02 0.02 0.02 0000 --- --- --- --- 003574 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 003595 00000 ------------ A 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 003679 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 003699 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003726 00000 ------------ G 0.75 0.48 0.62 A 0.25 0.52 0.38 0000 --- --- --- --- 003798 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 003861 00000 ------------ T 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 003871 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003887 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 004182 00000 ------------ - 0.65 0.48 0.56 + 0.35 0.52 0.44 0000 --- --- --- --- 004530 00000 ------------ T 0.70 0.58 0.64 C 0.30 0.42 0.36 0000 --- --- --- --- 004584 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004647 00000 ------------ - 0.02 0.12 0.07 + 0.98 0.88 0.93 0000 --- --- --- --- 004873 00000 ------------ A 1.00 0.88 0.94 C 0.00 0.12 0.06 0000 --- --- --- --- 004980* 005347 00274 NON-SYN C 1.00 0.93 0.97 T 0.00 0.07 0.03 0058 GCC GTC ALA(A) VAL(V) 005472 00000 ------------ T 0.76 1.00 0.88 C 0.24 0.00 0.12 0000 --- --- --- --- 005597 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 005645 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005740 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 005874 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005875 00000 ------------ A 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 006074 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006273 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006646 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007736 00000 ------------ C 0.76 1.00 0.88 A 0.24 0.00 0.12 0000 --- --- --- --- 008687 00000 ------------ T 0.73 1.00 0.87 C 0.27 0.00 0.13 0000 --- --- --- --- 008706 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008707 00000 ------------ A 0.98 0.80 0.89 T 0.02 0.20 0.11 0000 --- --- --- --- 008709 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008804 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008821 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 009187 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 009281 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009311 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 009892 00000 ------------ - 0.98 0.98 0.98 + 0.02 0.02 0.02 0000 --- --- --- --- 010689 00000 ------------ C 0.75 0.48 0.62 T 0.25 0.52 0.38 0000 --- --- --- --- 010722 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 010817 00000 ------------ C 0.75 0.48 0.62 T 0.25 0.52 0.38 0000 --- --- --- --- 010867 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010994 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011511 00000 ------------ A 0.72 1.00 0.86 G 0.28 0.00 0.14 0000 --- --- --- --- 012084 00000 ------------ T 0.78 1.00 0.87 C 0.22 0.00 0.13 0000 --- --- --- --- 012432 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012840 00000 ------------ G 0.79 0.48 0.64 T 0.21 0.52 0.36 0000 --- --- --- --- 012918 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012972 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013106 00000 ------------ C 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 013650 00000 ------------ A 0.75 1.00 0.87 G 0.25 0.00 0.13 0000 --- --- --- --- 013749 00000 ------------ T 0.73 0.54 0.64 A 0.27 0.46 0.36 0000 --- --- --- --- 013947 00000 ------------ G 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 014143 00000 ------------ A 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 014849 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015141 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015654 00000 ------------ A 0.86 0.86 0.86 C 0.14 0.14 0.14 0000 --- --- --- --- 015735 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 016147 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- 016749 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 017198 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017217 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017470 00000 ------------ C 0.73 1.00 0.86 A 0.27 0.00 0.14 0000 --- --- --- --- 017533 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017585 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017737 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017924 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 018290 00000 ------------ G 0.80 1.00 0.89 A 0.20 0.00 0.11 0000 --- --- --- --- 018355 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018651 00000 ------------ G 0.82 1.00 0.89 T 0.18 0.00 0.11 0000 --- --- --- --- 018997 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 019023 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019917 00000 ------------ C 0.80 0.47 0.64 T 0.20 0.53 0.36 0000 --- --- --- --- 020412 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020416 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 020454 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 020561 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020571 00000 ------------ G 0.78 0.95 0.87 A 0.23 0.05 0.13 0000 --- --- --- --- 021368 00000 ------------ G 1.00 0.91 0.96 T 0.00 0.09 0.04 0000 --- --- --- --- 021404 00000 ------------ G 0.64 0.59 0.62 A 0.36 0.41 0.38 0000 --- --- --- --- 021803 00000 ------------ G 0.72 1.00 0.87 A 0.28 0.00 0.13 0000 --- --- --- --- 021828 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022240 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023228 00687 3' UTR C 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 023236 00695 3' UTR A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023346 00805 3' UTR A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 023562 01021 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 023662 01121 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023821 01280 3' UTR T 0.75 0.52 0.63 C 0.25 0.48 0.37 0000 --- --- --- --- 024176 01635 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024196 01655 3' UTR G 0.54 0.54 0.54 A 0.46 0.46 0.46 0000 --- --- --- --- 024427 01886 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024712 02171 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003353: T 003563: T 004182: G 004647: T 005740: TTAG 009892: A 017924: G 020416: GTGGC The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Codon3 Amino1 Amino2 Amino3 004980 C 0.02 0.00 0.01 G 0.15 0.00 0.07 T 0.83 1.00 0.91 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000301 00000 ------------ G 0.50 0.74 0.62 C 0.50 0.26 0.38 0000 --- --- --- --- 000902 00000 ------------ - 0.41 0.63 0.52 + 0.59 0.37 0.48 0000 --- --- --- --- 001536 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001853 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001880 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002099 00102 5' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002280 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 002461 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 002687 00000 ------------ C 0.46 0.75 0.59 A 0.54 0.25 0.41 0000 --- --- --- --- 003512 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 003533 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 003551 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 008613 00000 ------------ A 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 008648 00000 ------------ T 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 009811 00000 ------------ A 0.68 0.63 0.65 G 0.32 0.37 0.35 0000 --- --- --- --- 009816 00000 ------------ G 0.95 0.89 0.92 A 0.05 0.11 0.08 0000 --- --- --- --- 010041 00000 ------------ C 0.91 0.89 0.90 T 0.09 0.11 0.10 0000 --- --- --- --- 010227 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 010503 00000 ------------ G 0.96 0.88 0.92 C 0.04 0.12 0.08 0000 --- --- --- --- 010752 00000 ------------ C 0.69 0.62 0.66 A 0.31 0.38 0.34 0000 --- --- --- --- 015699 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 016240 00000 ------------ A 0.67 0.54 0.61 G 0.33 0.46 0.39 0000 --- --- --- --- 016753 00000 ------------ C 0.81 0.74 0.78 T 0.19 0.26 0.22 0000 --- --- --- --- 016794 00000 ------------ G 0.71 0.46 0.59 A 0.29 0.54 0.41 0000 --- --- --- --- 017415 00000 ------------ T 0.67 0.54 0.61 C 0.33 0.46 0.39 0000 --- --- --- --- 017635 00000 ------------ - 0.02 0.11 0.07 + 0.98 0.89 0.93 0000 --- --- --- --- 023175 00000 ------------ G 1.00 0.93 0.96 A 0.00 0.07 0.04 0000 --- --- --- --- 024117 00000 ------------ - 0.67 0.63 0.65 + 0.33 0.37 0.35 0000 --- --- --- --- 024146 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024934 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 030495 00000 ------------ C 0.96 0.91 0.93 T 0.04 0.09 0.07 0000 --- --- --- --- 030514 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030559 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030571 00000 ------------ G 0.94 0.84 0.89 A 0.06 0.16 0.11 0000 --- --- --- --- 030611 00000 ------------ C 0.65 1.00 0.82 T 0.35 0.00 0.18 0000 --- --- --- --- 030620 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 030657 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 032247 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 039122 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039193 00000 ------------ G 0.77 0.35 0.58 A 0.23 0.65 0.42 0000 --- --- --- --- 039543 00000 ------------ G 0.97 0.90 0.94 A 0.03 0.10 0.06 0000 --- --- --- --- 039629 00000 ------------ G 0.97 0.90 0.94 A 0.03 0.10 0.06 0000 --- --- --- --- 040207 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 040938 00000 ------------ T 0.74 0.74 0.74 A 0.26 0.26 0.26 0000 --- --- --- --- 042174 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 042252 00000 ------------ T 0.85 0.36 0.62 G 0.15 0.64 0.38 0000 --- --- --- --- 042254 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 042713 00000 ------------ G 0.75 0.66 0.71 A 0.25 0.34 0.29 0000 --- --- --- --- 042984 00000 ------------ A 0.75 0.59 0.68 G 0.25 0.41 0.32 0000 --- --- --- --- 043359 00000 ------------ A 0.70 0.34 0.55 G 0.30 0.66 0.45 0000 --- --- --- --- 043573 00000 ------------ A 0.67 0.66 0.67 G 0.33 0.34 0.33 0000 --- --- --- --- 044244 00000 ------------ A 0.71 0.64 0.68 G 0.29 0.36 0.32 0000 --- --- --- --- 044677 00000 ------------ C 0.95 0.88 0.92 T 0.05 0.12 0.08 0000 --- --- --- --- 044678 00000 ------------ C 0.74 0.76 0.75 G 0.26 0.24 0.25 0000 --- --- --- --- 044682 00000 ------------ G 0.71 0.64 0.68 C 0.29 0.36 0.32 0000 --- --- --- --- 044689 00000 ------------ G 0.76 0.76 0.76 A 0.24 0.24 0.24 0000 --- --- --- --- 044714 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 044877 00526 SYNON G 0.96 1.00 0.98 C 0.04 0.00 0.02 0103 CGG CGC ARG(R) ARG(R) 045048 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 045074 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 045087 00000 ------------ - 1.00 0.95 0.98 + 0.00 0.05 0.02 0000 --- --- --- --- 046209 00000 ------------ C 0.95 0.90 0.93 T 0.05 0.10 0.07 0000 --- --- --- --- 046355 00000 ------------ T 0.74 0.65 0.70 C 0.26 0.35 0.30 0000 --- --- --- --- 046481 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 046494 00000 ------------ G 0.71 0.58 0.65 A 0.29 0.42 0.35 0000 --- --- --- --- 047616 00000 ------------ T 0.66 0.72 0.69 C 0.34 0.28 0.31 0000 --- --- --- --- 048061 00000 ------------ G 0.92 1.00 0.95 A 0.08 0.00 0.05 0000 --- --- --- --- 048253 00000 ------------ G 0.65 1.00 0.82 A 0.35 0.00 0.18 0000 --- --- --- --- 048265 00000 ------------ G 0.67 1.00 0.83 T 0.33 0.00 0.17 0000 --- --- --- --- 048331 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 048642 00000 ------------ C 0.63 1.00 0.81 T 0.37 0.00 0.19 0000 --- --- --- --- 048717 00000 ------------ G 0.63 1.00 0.81 T 0.37 0.00 0.19 0000 --- --- --- --- 049181 00000 ------------ A 0.65 1.00 0.81 G 0.35 0.00 0.19 0000 --- --- --- --- 049631 00000 ------------ G 0.76 0.40 0.61 A 0.24 0.60 0.39 0000 --- --- --- --- 050502 00000 ------------ G 0.64 1.00 0.81 A 0.36 0.00 0.19 0000 --- --- --- --- 050554 00000 ------------ G 0.68 1.00 0.82 A 0.33 0.00 0.18 0000 --- --- --- --- 050838 00000 ------------ G 0.62 0.97 0.78 C 0.38 0.03 0.22 0000 --- --- --- --- 051147 00646 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0143 ATG ATA MET(M) ILE(I) 051651 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 052760 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 052766 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 052777 00000 ------------ C 0.62 1.00 0.83 G 0.38 0.00 0.17 0000 --- --- --- --- 052979 00928 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0237 GAC GAT ASP(D) ASP(D) 053221 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 053250 00000 ------------ C 0.61 1.00 0.82 T 0.39 0.00 0.18 0000 --- --- --- --- 053788 00000 ------------ - 0.65 1.00 0.82 + 0.35 0.00 0.18 0000 --- --- --- --- 053836 00000 ------------ - 0.12 0.00 0.04 + 0.88 1.00 0.96 0000 --- --- --- --- 053858 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 054266 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 054738 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 055786 00000 ------------ G 0.65 1.00 0.82 C 0.35 0.00 0.18 0000 --- --- --- --- 055895 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 055962 00000 ------------ T 0.48 1.00 0.73 C 0.52 0.00 0.27 0000 --- --- --- --- 056201 00000 ------------ T 0.64 1.00 0.81 A 0.36 0.00 0.19 0000 --- --- --- --- 056884 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 057095 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 057280 00000 ------------ C 0.98 0.92 0.95 A 0.02 0.08 0.05 0000 --- --- --- --- 057288 00000 ------------ G 0.65 1.00 0.80 A 0.35 0.00 0.20 0000 --- --- --- --- 057290 00000 ------------ A 0.65 1.00 0.80 G 0.35 0.00 0.20 0000 --- --- --- --- 057304 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 057551 00000 ------------ C 0.60 1.00 0.78 T 0.40 0.00 0.22 0000 --- --- --- --- 057643 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 059053 00000 ------------ G 0.65 1.00 0.81 T 0.35 0.00 0.19 0000 --- --- --- --- 059116 00000 ------------ G 0.48 1.00 0.72 A 0.52 0.00 0.28 0000 --- --- --- --- 059213 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 059346 00000 ------------ G 0.65 1.00 0.81 A 0.35 0.00 0.19 0000 --- --- --- --- 059418 00000 ------------ G 0.63 1.00 0.79 A 0.37 0.00 0.21 0000 --- --- --- --- 059647 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 060990 00000 ------------ G 0.89 0.70 0.80 C 0.11 0.30 0.20 0000 --- --- --- --- 061124 00000 ------------ - 0.43 0.00 0.22 + 0.57 1.00 0.78 0000 --- --- --- --- 061349 00000 ------------ T 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 061705 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 062568 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 062649 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 062932 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 062986 00000 ------------ A 0.97 0.83 0.89 G 0.03 0.17 0.11 0000 --- --- --- --- 063039 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 064782 00000 ------------ A 0.70 0.82 0.76 G 0.30 0.18 0.24 0000 --- --- --- --- 064958 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 065091 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 065575 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 065854 00000 ------------ G 0.95 0.91 0.93 C 0.05 0.09 0.07 0000 --- --- --- --- 065954 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 065983 00000 ------------ G 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 066147 00000 ------------ G 0.97 0.98 0.98 T 0.03 0.02 0.02 0000 --- --- --- --- 066158 00000 ------------ C 0.26 0.80 0.56 T 0.74 0.20 0.44 0000 --- --- --- --- 066182 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 066198 00000 ------------ C 0.75 0.80 0.78 T 0.25 0.20 0.22 0000 --- --- --- --- 067142 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 067645 00000 ------------ C 0.79 0.81 0.80 G 0.21 0.19 0.20 0000 --- --- --- --- 067661 00000 ------------ T 0.83 0.82 0.83 C 0.17 0.17 0.17 0000 --- --- --- --- 067708 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 068690 00000 ------------ C 0.62 0.79 0.72 T 0.38 0.21 0.28 0000 --- --- --- --- 069674 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 070157 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 071293 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 071424 00000 ------------ A 0.58 0.80 0.69 T 0.42 0.20 0.31 0000 --- --- --- --- 071835 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 072738 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 072741 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 072927 00000 ------------ G 0.62 0.80 0.71 A 0.38 0.20 0.29 0000 --- --- --- --- 073204 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 074036 00000 ------------ C 0.93 0.80 0.87 T 0.07 0.20 0.13 0000 --- --- --- --- 074526 00000 ------------ C 0.82 1.00 0.92 A 0.17 0.00 0.08 0000 --- --- --- --- 075346 03111 3' UTR T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 076087 00000 ------------ A 0.55 0.80 0.67 G 0.45 0.20 0.33 0000 --- --- --- --- 076433 00000 ------------ C 0.85 0.41 0.60 T 0.15 0.59 0.40 0000 --- --- --- --- 076615 00000 ------------ A 0.73 0.86 0.81 G 0.27 0.14 0.19 0000 --- --- --- --- 076909 00000 ------------ A 0.55 0.79 0.66 G 0.45 0.21 0.34 0000 --- --- --- --- 077285 00000 ------------ - 0.25 0.00 0.12 + 0.75 1.00 0.88 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000902: G 002461: G 017635: ATTA 024117: ACAT 045087: A 051651: CTTTA 053788: T 053836: TATGTATATACACAT 061124: G 062932: TA 066182: ATT 070157: C 077285: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000082 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000446 00000 ------------ T 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 000891 00000 ------------ - 0.55 0.02 0.28 + 0.45 0.98 0.72 0000 --- --- --- --- 001399 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001739 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002262 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002278 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 002712 -----** NON-SYN A 0.96 1.00 0.98 G 0.04 0.00 0.02 ----*** CAA CGA GLN(Q) ARG(R) 002737 -----** SYNON A 0.96 1.00 0.98 G 0.04 0.00 0.02 ----*** GAA GAG GLU(E) GLU(E) 005595 00000 ------------ T 0.86 1.00 0.93 A 0.14 0.00 0.07 0000 --- --- --- --- 008686 00000 ------------ T 0.85 0.90 0.88 C 0.15 0.10 0.12 0000 --- --- --- --- 008888 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009363 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009623 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 009733 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012255 00000 ------------ T 0.89 0.33 0.61 G 0.11 0.67 0.39 0000 --- --- --- --- 012590 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012712 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 013429 00000 ------------ A 0.93 0.37 0.64 T 0.07 0.63 0.36 0000 --- --- --- --- 013516 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013529 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 013771 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 014193 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 014441 00000 ------------ C 1.00 0.88 0.94 G 0.00 0.12 0.06 0000 --- --- --- --- 014897 00000 ------------ T 0.79 0.91 0.85 A 0.21 0.09 0.15 0000 --- --- --- --- 015099 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015513 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 015731 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017286 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017486 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017679 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 017776 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017914 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018043 00000 ------------ G 0.69 1.00 0.85 A 0.31 0.00 0.15 0000 --- --- --- --- 018295 00000 ------------ G 0.94 0.80 0.86 A 0.06 0.20 0.14 0000 --- --- --- --- 018330 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 019113 00000 ------------ A 0.85 0.33 0.59 T 0.15 0.67 0.41 0000 --- --- --- --- 019249 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 019289 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019306 00000 ------------ T 0.74 1.00 0.87 C 0.26 0.00 0.13 0000 --- --- --- --- 019347 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020048 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 020176 00000 ------------ C 0.94 0.95 0.95 G 0.06 0.05 0.05 0000 --- --- --- --- 020655 00000 ------------ G 0.75 1.00 0.88 A 0.25 0.00 0.12 0000 --- --- --- --- 020693 00000 ------------ G 0.31 0.74 0.52 A 0.69 0.26 0.48 0000 --- --- --- --- 020867 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020878 00000 ------------ C 0.80 0.33 0.57 T 0.20 0.67 0.43 0000 --- --- --- --- 021249 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023980 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024046 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024393 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024564 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 038054 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 038354 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 038466 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038580 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 038650 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 038701 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 038807 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 038829 00000 ------------ G 0.65 0.72 0.68 A 0.35 0.28 0.32 0000 --- --- --- --- 038835 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039162 00000 ------------ C 0.54 0.98 0.76 T 0.46 0.02 0.24 0000 --- --- --- --- 039196 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 039431 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042910 00000 ------------ C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 042947 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 043224 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 043236 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 043269 00000 ------------ C 0.85 0.78 0.82 T 0.15 0.22 0.18 0000 --- --- --- --- 043502 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 043562 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 044372 00000 ------------ T 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 044697 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 044703 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 044769* 044774 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 044790 00000 ------------ A 0.81 1.00 0.90 G 0.19 0.00 0.10 0000 --- --- --- --- 044832 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 044912 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045400 -----** SYNON C 1.00 0.98 0.99 T 0.00 0.02 0.01 ----*** AAC AAT ASN(N) ASN(N) 045686 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 046178 00000 ------------ G 0.70 0.63 0.66 A 0.30 0.37 0.34 0000 --- --- --- --- 046837 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 046881 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 047002 00000 ------------ G 0.98 0.74 0.86 A 0.02 0.26 0.14 0000 --- --- --- --- 047154 00000 ------------ C 0.90 0.87 0.89 G 0.10 0.13 0.11 0000 --- --- --- --- 047364 00000 ------------ G 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 047583 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 047664 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 047673 00000 ------------ A 0.66 0.76 0.71 C 0.34 0.24 0.29 0000 --- --- --- --- 047677 00000 ------------ G 0.91 0.88 0.90 A 0.09 0.12 0.10 0000 --- --- --- --- 047747 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 047783 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 048111 00000 ------------ G 0.91 0.87 0.89 A 0.09 0.13 0.11 0000 --- --- --- --- 048342 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 048516 00000 ------------ A 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 048548 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 049160 -----** 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 049276 -----** 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 049487 00000 ------------ - 0.00 0.03 0.01 + 1.00 0.97 0.99 0000 --- --- --- --- 049577 00000 ------------ A 0.93 0.87 0.90 G 0.07 0.13 0.10 0000 --- --- --- --- 049837 00000 ------------ - 0.02 0.04 0.03 + 0.98 0.96 0.97 0000 --- --- --- --- 049847 00000 ------------ A 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 050342 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 050631 00000 ------------ T 0.70 0.67 0.68 G 0.30 0.33 0.32 0000 --- --- --- --- 050680 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 051118 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 051137 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 051617 00000 ------------ A 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 051649 00000 ------------ C 0.91 1.00 0.96 G 0.09 0.00 0.04 0000 --- --- --- --- 051955 00000 ------------ T 0.75 0.80 0.78 C 0.25 0.20 0.22 0000 --- --- --- --- 052147 00000 ------------ C 0.74 0.80 0.77 A 0.26 0.20 0.23 0000 --- --- --- --- 052404 00000 ------------ T 0.86 1.00 0.93 C 0.14 0.00 0.07 0000 --- --- --- --- *** Sites are not mapped to the complete CDS. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000891: T 001399: T 024564: A 042947: CTAC 049487: GTAA 049837: A The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 044769 A 0.17 0.48 0.32 G 0.79 0.52 0.66 T 0.04 0.00 0.02 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000072 00000 ------------ G 0.96 0.85 0.90 A 0.04 0.15 0.10 0000 --- --- --- --- 000194 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000261 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000321 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000627 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001204 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 001328 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001502 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001545 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 001950 00017 5' UTR - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 001964 00031 5' UTR G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003217 00000 ------------ G 0.83 0.65 0.74 A 0.17 0.35 0.26 0000 --- --- --- --- 004011 00000 ------------ G 0.56 0.65 0.61 A 0.44 0.35 0.39 0000 --- --- --- --- 004194 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004235 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004239 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 004683 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 004820 00000 ------------ G 0.83 0.68 0.76 A 0.17 0.32 0.24 0000 --- --- --- --- 004872 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 005336 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 006890 00710 NON-SYN T 0.98 1.00 0.99 G 0.02 0.00 0.01 0181 ATG AGG MET(M) ARG(R) 007145 00000 ------------ A 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007760 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 007848 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 008399 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 008522 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 008967 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 009210 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009805 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009827 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009831 00000 ------------ A 0.77 1.00 0.88 G 0.23 0.00 0.12 0000 --- --- --- --- 009854 00000 ------------ C 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 009940 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 009997 00000 ------------ A 0.80 0.62 0.71 G 0.20 0.38 0.29 0000 --- --- --- --- 010604 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 010684 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011047 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 012011 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012908 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013099 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013275 00000 ------------ A 0.94 0.87 0.90 C 0.06 0.13 0.10 0000 --- --- --- --- 013461 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013984 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014006 00000 ------------ C 0.62 0.45 0.54 T 0.38 0.55 0.46 0000 --- --- --- --- 014257 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 014903 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015139 00000 ------------ C 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 015160 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015415 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015752 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 016624 02689 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0841 CTA TTA LEU(L) LEU(L) 016902 02967 3' UTR G 0.83 0.65 0.74 A 0.17 0.35 0.26 0000 --- --- --- --- 017174 00000 ------------ G 0.76 0.55 0.66 A 0.24 0.45 0.34 0000 --- --- --- --- 017293 00000 ------------ A 0.96 0.87 0.91 G 0.04 0.13 0.09 0000 --- --- --- --- 017354 00000 ------------ A 0.60 0.63 0.62 G 0.40 0.37 0.38 0000 --- --- --- --- 017584 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 017845 00000 ------------ G 1.00 0.92 0.96 A 0.00 0.08 0.04 0000 --- --- --- --- 018210 00000 ------------ G 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 018295 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 018662 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 018709 00000 ------------ T 0.96 0.86 0.91 A 0.04 0.14 0.09 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001950: TGG 004683: TTGCCTCCCC 008399: C 018662: GGT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000358 00000 ------------ T 0.48 0.57 0.52 C 0.52 0.43 0.48 0000 --- --- --- --- 000435 00000 ------------ G 0.59 0.59 0.59 A 0.41 0.41 0.41 0000 --- --- --- --- 000620 00000 ------------ A 0.70 0.61 0.66 G 0.30 0.39 0.34 0000 --- --- --- --- 000679 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000961 00000 ------------ T 0.84 0.84 0.84 A 0.16 0.16 0.16 0000 --- --- --- --- 001105 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001265 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001355 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001477 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 001624 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 001659 00000 ------------ A 0.85 0.84 0.85 G 0.15 0.16 0.15 0000 --- --- --- --- 001781 00000 ------------ G 0.92 0.93 0.93 A 0.08 0.07 0.07 0000 --- --- --- --- 001847 00000 ------------ G 0.46 0.57 0.51 A 0.54 0.43 0.49 0000 --- --- --- --- 001957 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002076 00000 ------------ C 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 002364 00000 ------------ G 0.92 0.93 0.93 T 0.08 0.07 0.07 0000 --- --- --- --- 002446 00049 5' UTR G 0.67 0.61 0.64 A 0.33 0.39 0.36 0000 --- --- --- --- 002516 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002862 00000 ------------ T 0.50 0.59 0.54 C 0.50 0.41 0.46 0000 --- --- --- --- 003318 00000 ------------ C 0.96 0.98 0.97 T 0.04 0.02 0.03 0000 --- --- --- --- 003385 00000 ------------ A 0.90 0.98 0.94 G 0.10 0.02 0.06 0000 --- --- --- --- 003418 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 003620 00000 ------------ T 0.90 0.98 0.94 A 0.10 0.02 0.06 0000 --- --- --- --- 004540 00215 NON-SYN T 1.00 0.98 0.99 A 0.00 0.02 0.01 0055 AGT AGA SER(S) ARG(R) 004680 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004859 00000 ------------ C 0.91 0.91 0.91 T 0.09 0.09 0.09 0000 --- --- --- --- 005175 00000 ------------ G 0.57 0.55 0.56 A 0.43 0.45 0.44 0000 --- --- --- --- 005302 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 005588 00000 ------------ A 0.71 0.54 0.62 G 0.29 0.46 0.38 0000 --- --- --- --- 005900 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005992 00000 ------------ G 0.86 1.00 0.93 T 0.14 0.00 0.07 0000 --- --- --- --- 006012 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006468 00000 ------------ - 0.10 0.33 0.21 + 0.90 0.67 0.79 0000 --- --- --- --- 006604 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 006683 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 006703 00000 ------------ G 0.83 0.57 0.70 A 0.17 0.43 0.30 0000 --- --- --- --- 006796 00000 ------------ A 0.94 0.96 0.95 T 0.06 0.04 0.05 0000 --- --- --- --- 006798 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 006803 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007028 00000 ------------ G 0.92 0.89 0.90 C 0.08 0.11 0.10 0000 --- --- --- --- 007148 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007198 00000 ------------ A 0.92 0.93 0.93 G 0.08 0.07 0.07 0000 --- --- --- --- 007280 00000 ------------ C 0.83 0.57 0.70 T 0.17 0.43 0.30 0000 --- --- --- --- 007312 00000 ------------ C 0.94 0.89 0.91 T 0.06 0.11 0.09 0000 --- --- --- --- 007319 00000 ------------ G 0.90 0.89 0.89 A 0.10 0.11 0.11 0000 --- --- --- --- 007399 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007461 00000 ------------ T 0.79 0.85 0.82 G 0.21 0.15 0.18 0000 --- --- --- --- 008515 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008616 00000 ------------ - 0.10 0.11 0.11 + 0.90 0.89 0.89 0000 --- --- --- --- 009027 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009210 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009400 00000 ------------ A 0.78 0.87 0.83 C 0.22 0.13 0.17 0000 --- --- --- --- 009460 00000 ------------ - 0.11 0.09 0.10 + 0.89 0.91 0.90 0000 --- --- --- --- 009948 00000 ------------ C 0.79 0.87 0.83 G 0.21 0.13 0.17 0000 --- --- --- --- 010070 00000 ------------ G 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 010074 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010131 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 010169 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010278 00000 ------------ G 0.95 0.98 0.97 A 0.05 0.02 0.03 0000 --- --- --- --- 010380 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010445 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 010489 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010798 00000 ------------ G 0.86 0.98 0.92 T 0.14 0.02 0.08 0000 --- --- --- --- 010816 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 010915 00000 ------------ G 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 010940 00000 ------------ T 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 011007 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011118 00000 ------------ T 0.93 0.91 0.92 G 0.07 0.09 0.08 0000 --- --- --- --- 011176 00000 ------------ C 0.75 0.59 0.67 G 0.25 0.41 0.33 0000 --- --- --- --- 011320 00000 ------------ T 0.89 0.91 0.90 G 0.11 0.09 0.10 0000 --- --- --- --- 011459 00632 SYNON A 0.98 1.00 0.99 G 0.02 0.00 0.01 0194 CCA CCG PRO(P) PRO(P) 011501 00674 SYNON G 0.82 0.59 0.70 A 0.18 0.41 0.30 0208 TCG TCA SER(S) SER(S) 011780 00000 ------------ G 0.91 0.95 0.93 A 0.09 0.05 0.07 0000 --- --- --- --- 011982 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012005 00000 ------------ T 0.77 0.59 0.68 C 0.23 0.41 0.32 0000 --- --- --- --- 012131 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 012198 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012608 00000 ------------ G 0.88 1.00 0.95 A 0.12 0.00 0.05 0000 --- --- --- --- 012736 00000 ------------ T 0.72 0.54 0.62 G 0.28 0.46 0.38 0000 --- --- --- --- 012787 00000 ------------ G 0.89 1.00 0.94 C 0.11 0.00 0.06 0000 --- --- --- --- 012895 00789 SYNON C 0.96 0.89 0.92 T 0.04 0.11 0.08 0247 CTG TTG LEU(L) LEU(L) 012960 00854 SYNON T 0.80 1.00 0.90 C 0.20 0.00 0.10 0268 CAT CAC HIS(H) HIS(H) 012985 00879 NON-SYN G 1.00 0.96 0.98 A 0.00 0.04 0.02 0277 GGC AGC GLY(G) SER(S) 013134 00000 ------------ A 0.73 1.00 0.86 G 0.27 0.00 0.14 0000 --- --- --- --- 013223 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013256 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 013483 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013500 00000 ------------ C 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 013594 00000 ------------ C 0.69 0.35 0.52 G 0.31 0.65 0.48 0000 --- --- --- --- 013738 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013802 00937 NON-SYN A 0.95 1.00 0.98 G 0.05 0.00 0.02 0296 GAC GGC ASP(D) GLY(G) 014016 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 014025 00000 ------------ C 0.89 0.59 0.73 T 0.11 0.41 0.27 0000 --- --- --- --- 014228 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 014874 00000 ------------ T 0.89 0.59 0.73 G 0.11 0.41 0.27 0000 --- --- --- --- 015134 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 015487 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 015730 00000 ------------ T 0.66 0.52 0.59 G 0.34 0.48 0.41 0000 --- --- --- --- 015751 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 016363 00000 ------------ G 0.93 1.00 0.96 A 0.07 0.00 0.04 0000 --- --- --- --- 016403 00000 ------------ A 0.89 0.55 0.72 G 0.11 0.45 0.28 0000 --- --- --- --- 016615 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 016672 00000 ------------ T 0.80 0.57 0.68 G 0.20 0.43 0.32 0000 --- --- --- --- 016799 00000 ------------ C 0.90 0.57 0.74 T 0.10 0.43 0.26 0000 --- --- --- --- 016816 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 016910 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 017194 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017347 00000 ------------ C 0.79 0.59 0.70 A 0.21 0.41 0.30 0000 --- --- --- --- 017365 00000 ------------ C 0.79 0.59 0.70 T 0.21 0.41 0.30 0000 --- --- --- --- 017404 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 017410 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017449 00000 ------------ G 0.83 0.59 0.72 T 0.17 0.41 0.28 0000 --- --- --- --- 017510 00000 ------------ C 0.98 0.95 0.97 T 0.02 0.05 0.03 0000 --- --- --- --- 017560 00000 ------------ C 0.90 0.59 0.75 A 0.10 0.41 0.25 0000 --- --- --- --- 017561 00000 ------------ T 0.83 0.59 0.72 C 0.17 0.41 0.28 0000 --- --- --- --- 017628 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 017631 00000 ------------ T 0.79 0.57 0.68 A 0.21 0.43 0.32 0000 --- --- --- --- 017761 00000 ------------ A 0.81 0.62 0.72 C 0.19 0.38 0.28 0000 --- --- --- --- 017825 00000 ------------ G 0.81 0.62 0.72 A 0.19 0.38 0.28 0000 --- --- --- --- 017927 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017990 00000 ------------ A 0.79 0.62 0.71 G 0.21 0.38 0.29 0000 --- --- --- --- 018301 00000 ------------ C 0.65 0.37 0.50 T 0.35 0.63 0.50 0000 --- --- --- --- 018316 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018350 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018389 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 018428 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 018800 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 018891 00000 ------------ C 0.75 0.28 0.52 T 0.25 0.72 0.48 0000 --- --- --- --- 018924 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019179 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019215 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019303 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019403 00000 ------------ G 0.89 0.59 0.74 A 0.11 0.41 0.26 0000 --- --- --- --- 019835 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 020043 00000 ------------ G 0.90 0.59 0.74 A 0.10 0.41 0.26 0000 --- --- --- --- 020062 00000 ------------ T 0.92 0.70 0.81 G 0.08 0.30 0.19 0000 --- --- --- --- 020087 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020366 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 020869 00000 ------------ C 0.30 0.72 0.51 T 0.70 0.28 0.49 0000 --- --- --- --- 021202 00000 ------------ G 0.85 0.59 0.72 A 0.15 0.41 0.28 0000 --- --- --- --- 021239 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 021361 00000 ------------ C 0.96 0.80 0.88 T 0.04 0.20 0.12 0000 --- --- --- --- 021372 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 021509 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021566 00000 ------------ T 0.77 0.59 0.68 C 0.23 0.41 0.32 0000 --- --- --- --- 021885 00000 ------------ G 0.81 0.59 0.69 A 0.19 0.41 0.31 0000 --- --- --- --- 022003 00000 ------------ T 0.95 0.89 0.92 C 0.05 0.11 0.08 0000 --- --- --- --- 022158 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022161 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 022532 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022539 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 022544 00000 ------------ G 0.91 0.73 0.82 C 0.09 0.27 0.18 0000 --- --- --- --- 022627 00000 ------------ G 0.48 0.72 0.60 A 0.52 0.28 0.40 0000 --- --- --- --- 022837 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022844 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 022858 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023003 00000 ------------ C 0.67 0.70 0.68 T 0.33 0.30 0.32 0000 --- --- --- --- 023032 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 023213 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 023266 00000 ------------ G 0.57 0.67 0.62 A 0.43 0.33 0.38 0000 --- --- --- --- 023793 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 024131 01622 SYNON G 0.67 0.70 0.68 C 0.33 0.30 0.32 0524 CTG CTC LEU(L) LEU(L) 024161 01652 SYNON C 0.93 1.00 0.97 T 0.07 0.00 0.03 0534 TAC TAT TYR(Y) TYR(Y) 024173 01664 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0538 GGC GGT GLY(G) GLY(G) 024438 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024487 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 024559 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 024646 00000 ------------ - 0.48 0.28 0.38 + 0.52 0.72 0.62 0000 --- --- --- --- 024799 00000 ------------ C 0.61 0.59 0.60 G 0.39 0.41 0.40 0000 --- --- --- --- 024982 00000 ------------ C 0.52 0.72 0.62 T 0.48 0.28 0.38 0000 --- --- --- --- 025845 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 026052 00000 ------------ C 0.50 0.76 0.64 A 0.50 0.24 0.36 0000 --- --- --- --- 026464 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 026684 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 026758 00000 ------------ G 0.87 0.70 0.78 A 0.13 0.30 0.22 0000 --- --- --- --- 026778 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027485 00000 ------------ G 0.41 0.76 0.59 A 0.59 0.24 0.41 0000 --- --- --- --- 027509 00000 ------------ C 0.92 0.83 0.87 A 0.08 0.17 0.13 0000 --- --- --- --- 027688 00000 ------------ G 0.88 0.57 0.72 A 0.12 0.43 0.28 0000 --- --- --- --- 027733 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028621 00000 ------------ C 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 029929 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029936 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 030240 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030504 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 030882 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 031000 00000 ------------ T 0.82 0.67 0.74 C 0.17 0.33 0.26 0000 --- --- --- --- 031411 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 031527 01815 NON-SYN C 0.93 0.96 0.95 T 0.07 0.04 0.05 0589 CCT TCT PRO(P) SER(S) 031702 00000 ------------ C 0.95 0.70 0.82 A 0.05 0.30 0.18 0000 --- --- --- --- 031851 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032022 00000 ------------ T 0.75 0.96 0.83 C 0.25 0.04 0.17 0000 --- --- --- --- 032074 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032132 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 032190 00000 ------------ T 0.82 0.96 0.87 C 0.18 0.04 0.13 0000 --- --- --- --- 032210 00000 ------------ T 1.00 0.96 0.99 C 0.00 0.04 0.01 0000 --- --- --- --- 032556 00000 ------------ T 0.81 1.00 0.91 G 0.19 0.00 0.09 0000 --- --- --- --- 032634 00000 ------------ A 0.86 0.57 0.71 G 0.14 0.43 0.29 0000 --- --- --- --- 032846 00000 ------------ C 0.91 0.70 0.80 A 0.09 0.30 0.20 0000 --- --- --- --- 032943 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 033032 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033583 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 033612 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 033726 00000 ------------ T 0.86 0.57 0.71 C 0.14 0.43 0.29 0000 --- --- --- --- 033733 00000 ------------ A 0.95 0.96 0.96 T 0.05 0.04 0.04 0000 --- --- --- --- 035047 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 035052 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 035902 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 035914 00000 ------------ A 0.65 0.57 0.61 G 0.35 0.43 0.39 0000 --- --- --- --- 035962 00000 ------------ G 0.72 0.57 0.64 A 0.28 0.43 0.36 0000 --- --- --- --- 036236 00000 ------------ G 0.83 0.57 0.70 A 0.17 0.43 0.30 0000 --- --- --- --- 036294 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 036873 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 037111 00000 ------------ G 0.97 0.94 0.96 A 0.03 0.06 0.04 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006468: TCCTCTACCC 008616: ATA 009460: AG 010380: CCC 017404: C 018800: C 024646: TGGAG 026464: T 029936: C 030504: AC 032943: G 035902: G 036294: CCTTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000058 00000 ------------ A 0.28 0.78 0.51 G 0.72 0.23 0.49 0000 --- --- --- --- 000355 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 000435 00000 ------------ - 0.39 0.76 0.57 + 0.61 0.24 0.43 0000 --- --- --- --- 000451 00000 ------------ G 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 000529 00000 ------------ A 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 000637 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 000665 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 000816 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 000840 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000920 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 001102 00000 ------------ - 0.87 1.00 0.93 + 0.13 0.00 0.07 0000 --- --- --- --- 001183 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 001502 00000 ------------ G 0.94 0.59 0.77 A 0.06 0.41 0.23 0000 --- --- --- --- 001796 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002064 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 002418 00000 ------------ T 0.74 0.38 0.56 C 0.26 0.62 0.44 0000 --- --- --- --- 002448 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002717 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003020 00000 ------------ G 0.92 0.95 0.93 T 0.08 0.05 0.07 0000 --- --- --- --- 003155 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 003191 00000 ------------ A 0.87 0.95 0.91 T 0.13 0.05 0.09 0000 --- --- --- --- 003437 00000 ------------ T 1.00 0.90 0.95 C 0.00 0.10 0.05 0000 --- --- --- --- 003516 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003719 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 004153 00000 ------------ T 0.87 1.00 0.94 C 0.13 0.00 0.06 0000 --- --- --- --- 004271 00000 ------------ A 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 004329 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 004402 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 004421 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004457 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004496 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004528 00000 ------------ A 0.84 1.00 0.93 G 0.16 0.00 0.07 0000 --- --- --- --- 005083 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 005220 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 005240 00000 ------------ A 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 005310 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 005474 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 005530 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 005736 00000 ------------ C 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 005845 00000 ------------ - 0.17 0.05 0.11 + 0.82 0.95 0.89 0000 --- --- --- --- 006136 00000 ------------ - 0.89 1.00 0.95 + 0.11 0.00 0.05 0000 --- --- --- --- 006419 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 006551 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 006577 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006725 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 006754 00000 ------------ C 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 006757 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 007326 00000 ------------ G 0.76 0.38 0.58 A 0.24 0.62 0.42 0000 --- --- --- --- 007345 00000 ------------ A 0.84 0.95 0.90 G 0.16 0.05 0.10 0000 --- --- --- --- 007493 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 007687 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 008201 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008290 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 008315 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 008346 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 008702 00000 ------------ T 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 008843 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 009089 00000 ------------ A 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 009091 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009648 00000 ------------ - 0.87 1.00 0.93 + 0.13 0.00 0.07 0000 --- --- --- --- 009760 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010039 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010124 00000 ------------ T 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 010185 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 010251 00000 ------------ T 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 010628 00000 ------------ A 0.36 0.59 0.50 G 0.64 0.41 0.50 0000 --- --- --- --- 010652 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 010977 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011018 00000 ------------ A 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 011094 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011132 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011281 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 011316 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011388 00000 ------------ C 0.92 0.98 0.95 T 0.08 0.02 0.05 0000 --- --- --- --- 011389 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 011851 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011970 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 011982 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 012068 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 012097 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012122 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012200 00000 ------------ G 0.85 0.73 0.79 A 0.15 0.27 0.21 0000 --- --- --- --- 012225 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 012239 00000 ------------ G 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 012283 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012579 00000 ------------ A 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 012797 00000 ------------ - 0.98 0.95 0.97 + 0.02 0.05 0.03 0000 --- --- --- --- 012876 00000 ------------ G 0.88 1.00 0.93 C 0.12 0.00 0.07 0000 --- --- --- --- 013029 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 013123 00000 ------------ G 0.85 0.76 0.80 T 0.15 0.24 0.20 0000 --- --- --- --- 013279 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013613 00000 ------------ C 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 013688 00000 ------------ T 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 013696 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 013728 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 013736 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013779 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 013958 00000 ------------ G 0.75 0.76 0.76 C 0.25 0.24 0.24 0000 --- --- --- --- 014043 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 014155 00000 ------------ - 1.00 0.89 0.95 + 0.00 0.11 0.05 0000 --- --- --- --- 014158 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014193 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 014427 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014468 00000 ------------ C 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 014694 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014812 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 014882 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 015371 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015672 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016177 00000 ------------ - 0.55 0.75 0.65 + 0.45 0.25 0.35 0000 --- --- --- --- 016235 00000 ------------ T 0.94 0.95 0.94 G 0.06 0.05 0.06 0000 --- --- --- --- 016271 00000 ------------ T 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 016386 00000 ------------ C 0.48 0.72 0.60 T 0.52 0.28 0.40 0000 --- --- --- --- 016517 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016549 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016551 00000 ------------ A 0.92 0.80 0.86 G 0.08 0.20 0.14 0000 --- --- --- --- 016642 00000 ------------ A 0.48 0.72 0.60 C 0.52 0.28 0.40 0000 --- --- --- --- 017129 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 017458 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 018239 00000 ------------ - 0.43 0.67 0.56 + 0.57 0.33 0.44 0000 --- --- --- --- 018267 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 018481 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019151 00000 ------------ T 0.62 0.72 0.67 C 0.38 0.28 0.33 0000 --- --- --- --- 019169 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019246 00000 ------------ A 0.98 0.61 0.80 T 0.02 0.39 0.20 0000 --- --- --- --- 019254 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019334 00000 ------------ A 0.75 0.41 0.59 G 0.25 0.59 0.41 0000 --- --- --- --- 019381 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019514 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019548 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 019882 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 020174 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020496 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020884 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021164 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 021609 00000 ------------ - 0.00 0.28 0.14 + 1.00 0.72 0.86 0000 --- --- --- --- 021639 00000 ------------ A 0.76 0.43 0.60 C 0.24 0.57 0.40 0000 --- --- --- --- 021697 00000 ------------ T 0.89 0.95 0.92 C 0.11 0.05 0.08 0000 --- --- --- --- 021727 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 022005 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022318 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022321 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 022881 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 023172 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 023235 00000 ------------ T 1.00 0.91 0.96 A 0.00 0.09 0.04 0000 --- --- --- --- 023252 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 023441 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 023755 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023849 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 024031 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024356 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 024708 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 024807 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 024961 00000 ------------ G 0.66 0.71 0.69 C 0.34 0.29 0.31 0000 --- --- --- --- 024987 00000 ------------ G 0.95 0.74 0.85 A 0.05 0.26 0.15 0000 --- --- --- --- 025277 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025292 00000 ------------ C 0.86 0.72 0.80 T 0.14 0.28 0.20 0000 --- --- --- --- 026492 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026527 00000 ------------ C 0.65 0.72 0.68 T 0.35 0.28 0.32 0000 --- --- --- --- 026573 00000 ------------ - 0.11 0.06 0.09 + 0.89 0.94 0.91 0000 --- --- --- --- 026601 00000 ------------ C 0.91 0.80 0.86 T 0.09 0.20 0.14 0000 --- --- --- --- 026774 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026811 00000 ------------ A 0.65 0.74 0.70 G 0.35 0.26 0.30 0000 --- --- --- --- 027177 00000 ------------ T 0.52 0.71 0.61 C 0.48 0.29 0.39 0000 --- --- --- --- 027475 00000 ------------ C 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 027518 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 027968 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027981 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 028041 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028425 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028538 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028917 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 029024 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 029239 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029261 00000 ------------ C 0.83 0.72 0.78 T 0.17 0.28 0.22 0000 --- --- --- --- 029374 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 029420 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029575 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 029578 00000 ------------ A 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 029591 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 029912 00000 ------------ A 0.67 0.72 0.69 G 0.33 0.28 0.31 0000 --- --- --- --- 029959 00000 ------------ C 0.52 0.67 0.60 A 0.48 0.33 0.40 0000 --- --- --- --- 029973 00000 ------------ G 0.52 0.67 0.60 A 0.48 0.33 0.40 0000 --- --- --- --- 030150 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 030181 00000 ------------ - 0.98 0.95 0.97 + 0.02 0.05 0.03 0000 --- --- --- --- 030224 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 030449 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 030596 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 030614 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 030845 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030859 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 030883 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030960 00000 ------------ T 0.67 0.72 0.69 A 0.33 0.28 0.31 0000 --- --- --- --- 031083 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 031187 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 031254 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031512 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 031559 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 031601 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031725 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 031763 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 031764 00000 ------------ - 0.86 1.00 0.93 + 0.14 0.00 0.07 0000 --- --- --- --- 031819 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031835 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 032256 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032328 00000 ------------ C 0.93 1.00 0.96 G 0.07 0.00 0.04 0000 --- --- --- --- 032368 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032446 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 032541 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 032561 00000 ------------ - 0.00 0.10 0.05 + 1.00 0.90 0.95 0000 --- --- --- --- 033006 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 033014 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 033065 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 033510 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 033605 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 033763 00000 ------------ T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 034214 00000 ------------ A 0.52 0.72 0.62 C 0.48 0.28 0.38 0000 --- --- --- --- 034424 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 034523 00000 ------------ T 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 034664 00000 ------------ T 1.00 0.91 0.95 G 0.00 0.09 0.05 0000 --- --- --- --- 034681 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 034696 00000 ------------ A 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 035019 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035065 00000 ------------ A 0.74 0.73 0.73 G 0.26 0.27 0.27 0000 --- --- --- --- 035117 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035615 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 035910 00000 ------------ A 0.56 0.72 0.64 C 0.44 0.28 0.36 0000 --- --- --- --- 036070 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036088 00000 ------------ C 0.65 0.40 0.53 A 0.35 0.60 0.47 0000 --- --- --- --- 036179 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036413 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 036474 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 036486 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 036779 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 036783 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 036794 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 037044 00000 ------------ - 0.88 0.85 0.86 + 0.12 0.15 0.14 0000 --- --- --- --- 037249 00000 ------------ C 0.46 0.72 0.59 T 0.54 0.28 0.41 0000 --- --- --- --- 037445 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 037621 00000 ------------ T 0.55 0.72 0.64 C 0.45 0.28 0.36 0000 --- --- --- --- 038123 00000 ------------ G 0.88 0.72 0.80 T 0.12 0.28 0.20 0000 --- --- --- --- 038709 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 038792 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- ** Sites are not mapped to the complete CDNA. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000435: AT 001102: A 003155: C 005220: AGTTA 005310: GGTACA 005845: GCT 006136: C 009648: A 011389: G 011970: AG 012797: G 014155: G 016177: AC 018239: TGTA 019548: T 021609: GTTT 023172: GCATTATT 026573: CT 030181: T 030224: AA 031763: C 031764: G 032446: AATT 032561: T 033014: A 033605: A 035615: A 036486: T 036779: T 037044: A 038709: AT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000632 00432 NON-SYN C 0.97 1.00 0.99 T 0.03 0.00 0.01 0060 ACG ATG THR(T) MET(M) 000990 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001001 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001041 00000 ------------ T 0.61 1.00 0.77 C 0.39 0.00 0.23 0000 --- --- --- --- 001169 00000 ------------ A 0.84 0.83 0.84 C 0.16 0.17 0.16 0000 --- --- --- --- 001401 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 001640 00000 ------------ G 0.96 0.97 0.96 T 0.04 0.03 0.04 0000 --- --- --- --- 001643 00000 ------------ G 0.75 1.00 0.86 A 0.25 0.00 0.14 0000 --- --- --- --- 001645 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002425 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002524 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 002923 00000 ------------ A 0.85 0.74 0.79 G 0.15 0.26 0.21 0000 --- --- --- --- 003005 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003043 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003221 00000 ------------ G 0.80 0.73 0.77 A 0.20 0.27 0.23 0000 --- --- --- --- 003437 00000 ------------ A 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 003942 00000 ------------ T 0.93 0.95 0.94 C 0.07 0.05 0.06 0000 --- --- --- --- 004111 00000 ------------ T 0.50 0.71 0.60 C 0.50 0.29 0.40 0000 --- --- --- --- 004141 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 004850 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005328 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 005586 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005979 00000 ------------ - 0.43 0.24 0.34 + 0.57 0.76 0.66 0000 --- --- --- --- 006132 00000 ------------ A 0.48 0.70 0.59 T 0.52 0.30 0.41 0000 --- --- --- --- 006228 00000 ------------ G 0.52 0.70 0.61 A 0.48 0.30 0.39 0000 --- --- --- --- 006929 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006941 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007029 00000 ------------ C 0.56 0.76 0.66 T 0.44 0.24 0.34 0000 --- --- --- --- 007416 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007446 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 007703 00000 ------------ G 0.64 0.72 0.68 C 0.36 0.28 0.32 0000 --- --- --- --- 007799 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 008062 00000 ------------ A 0.64 0.72 0.68 G 0.36 0.28 0.32 0000 --- --- --- --- 008351 00000 ------------ G 0.70 0.76 0.73 C 0.30 0.24 0.27 0000 --- --- --- --- 008542 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 008572 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 008682 00000 ------------ G 0.67 0.76 0.71 C 0.33 0.24 0.29 0000 --- --- --- --- 009082 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 009088 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 009829 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 009933 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 010441 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010568 00000 ------------ G 0.58 0.70 0.64 A 0.42 0.30 0.36 0000 --- --- --- --- 010613 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010657 00000 ------------ T 0.67 0.77 0.72 C 0.33 0.23 0.28 0000 --- --- --- --- 011066 00000 ------------ C 0.71 0.77 0.74 G 0.29 0.23 0.26 0000 --- --- --- --- 011258 00000 ------------ A 0.75 0.77 0.76 G 0.25 0.23 0.24 0000 --- --- --- --- 011271 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011751 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 011791 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012337 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 012543 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 012728 00000 ------------ G 0.95 0.98 0.97 C 0.05 0.02 0.03 0000 --- --- --- --- 012749 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012810 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013132 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 014031 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014316 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014912 00000 ------------ C 0.90 0.97 0.94 G 0.10 0.03 0.06 0000 --- --- --- --- 015067 00000 ------------ T 0.83 0.93 0.88 G 0.17 0.07 0.12 0000 --- --- --- --- 015102 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015490 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015560 00000 ------------ G 0.50 0.74 0.65 A 0.50 0.26 0.35 0000 --- --- --- --- 015578 00000 ------------ - 0.27 0.07 0.17 + 0.73 0.93 0.83 0000 --- --- --- --- 015904 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 016022 00000 ------------ G 0.81 0.78 0.80 A 0.19 0.23 0.20 0000 --- --- --- --- 016058 00000 ------------ T 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 016143 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016163 00000 ------------ A 0.71 0.90 0.80 T 0.29 0.10 0.20 0000 --- --- --- --- 016703 00000 ------------ A 0.74 0.93 0.83 G 0.26 0.07 0.17 0000 --- --- --- --- 017152 00000 ------------ G 0.81 0.94 0.87 C 0.19 0.06 0.13 0000 --- --- --- --- 017188 00000 ------------ A 0.73 0.94 0.82 G 0.27 0.06 0.18 0000 --- --- --- --- 017828 00000 ------------ T 0.72 0.94 0.81 C 0.28 0.06 0.19 0000 --- --- --- --- 018141 00000 ------------ A 0.61 0.68 0.64 G 0.39 0.32 0.36 0000 --- --- --- --- 018225 00000 ------------ G 0.96 0.97 0.96 A 0.04 0.03 0.04 0000 --- --- --- --- 018327 00000 ------------ T 0.98 0.74 0.87 G 0.02 0.26 0.13 0000 --- --- --- --- 018367 00000 ------------ A 0.96 1.00 0.97 G 0.04 0.00 0.03 0000 --- --- --- --- 018566 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018571 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018660 00000 ------------ C 0.72 0.77 0.74 G 0.28 0.23 0.26 0000 --- --- --- --- 018905 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 019557 00000 ------------ G 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 019631 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019916 00000 ------------ T 0.77 0.72 0.74 A 0.23 0.28 0.26 0000 --- --- --- --- 020677 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 020807 00000 ------------ A 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 020973 00000 ------------ A 0.94 0.72 0.83 G 0.06 0.28 0.17 0000 --- --- --- --- 021862 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 022049 01375 SYNON C 0.86 1.00 0.93 G 0.14 0.00 0.07 0374 GCC GCG ALA(A) ALA(A) 022175 01501 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022421 01747 3' UTR C 0.94 1.00 0.98 T 0.06 0.00 0.02 0000 --- --- --- --- 022832 02158 3' UTR A 0.84 1.00 0.93 G 0.16 0.00 0.07 0000 --- --- --- --- 022848 02174 3' UTR G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 022986 02312 3' UTR G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005979: AATTTT 015578: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000393 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000970 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001075 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 001209 00000 ------------ + 0.86 0.91 0.89 - 0.14 0.09 0.11 0000 --- --- --- --- 001621 00000 ------------ C 0.96 0.95 0.96 G 0.04 0.05 0.04 0000 --- --- --- --- 001628 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 001849 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001982 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004007 01960 NON-SYN C 0.85 0.87 0.86 T 0.15 0.13 0.14 0473 GCC GTC ALA(A) VAL(V) 004404 02357 3' UTR T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 004475 02428 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004594 02547 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 004814 02767 3' UTR G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005110 03063 3' UTR A 0.70 0.50 0.60 G 0.30 0.50 0.40 0000 --- --- --- --- 005318 03271 3' UTR A 0.85 0.87 0.86 C 0.15 0.13 0.14 0000 --- --- --- --- 005786 03739 3' UTR C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006080 04033 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006235 00000 ------------ A 0.79 0.71 0.76 G 0.21 0.29 0.24 0000 --- --- --- --- 006310 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 006460 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 006624 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 006730 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006867 00000 ------------ + 0.20 0.03 0.12 - 0.80 0.97 0.88 0000 --- --- --- --- 006899 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007006 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007066 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007216 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008164 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008365 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008436 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001209: T 006867: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000546 00000 ------------ A 0.79 0.57 0.68 G 0.21 0.43 0.32 0000 --- --- --- --- 000764 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000839 00000 ------------ A 0.65 0.54 0.59 G 0.35 0.46 0.41 0000 --- --- --- --- 002202 00204 5' UTR G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 002272 00274 5' UTR C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 002546 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002870 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 003375 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 003385 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003475 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 003476 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004271 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 004393 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004423 00000 ------------ T 0.57 0.56 0.57 G 0.43 0.44 0.43 0000 --- --- --- --- 005301 00000 ------------ G 0.77 0.63 0.70 A 0.23 0.37 0.30 0000 --- --- --- --- 005596 00000 ------------ C 0.74 0.84 0.78 T 0.26 0.16 0.22 0000 --- --- --- --- 005710 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005980 00000 ------------ T 0.74 0.61 0.68 C 0.26 0.39 0.32 0000 --- --- --- --- 006275 00000 ------------ A 1.00 0.94 0.97 G 0.00 0.06 0.03 0000 --- --- --- --- 006983 00534 NON-SYN T 0.98 1.00 0.99 A 0.02 0.00 0.01 0055 CTG CAG LEU(L) GLN(Q) 007285 00000 ------------ - 0.31 0.42 0.36 + 0.69 0.58 0.64 0000 --- --- --- --- 007529 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007719 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007770 00000 ------------ - 0.10 0.00 0.06 + 0.90 1.00 0.94 0000 --- --- --- --- 008165 00000 ------------ C 0.70 0.60 0.65 T 0.30 0.40 0.35 0000 --- --- --- --- 008239 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008315 00000 ------------ C 0.77 0.88 0.83 T 0.23 0.12 0.17 0000 --- --- --- --- 008374 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008590 00000 ------------ T 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 008885 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009141 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009580 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009654 00000 ------------ G 0.67 0.57 0.62 A 0.33 0.43 0.38 0000 --- --- --- --- 009700 00000 ------------ G 0.74 0.89 0.82 A 0.26 0.11 0.18 0000 --- --- --- --- 009744 00000 ------------ C 0.74 0.89 0.82 T 0.26 0.11 0.18 0000 --- --- --- --- 010055 00000 ------------ C 0.73 0.89 0.81 T 0.27 0.11 0.19 0000 --- --- --- --- 010959 00000 ------------ T 0.68 0.88 0.78 C 0.33 0.12 0.22 0000 --- --- --- --- 011101 00000 ------------ G 1.00 0.93 0.97 T 0.00 0.07 0.03 0000 --- --- --- --- 011255 00000 ------------ - 0.34 0.20 0.27 + 0.66 0.80 0.73 0000 --- --- --- --- 011401 00000 ------------ G 0.70 0.89 0.80 A 0.30 0.11 0.20 0000 --- --- --- --- 011587 00000 ------------ G 0.65 0.55 0.60 A 0.35 0.45 0.40 0000 --- --- --- --- 011773 00000 ------------ A 0.59 0.55 0.57 G 0.41 0.45 0.43 0000 --- --- --- --- 012502 00000 ------------ C 0.54 0.53 0.53 T 0.46 0.47 0.47 0000 --- --- --- --- 012577 00000 ------------ G 0.54 0.53 0.53 A 0.46 0.47 0.47 0000 --- --- --- --- 012850 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 012879 00000 ------------ A 0.73 0.88 0.80 G 0.27 0.12 0.20 0000 --- --- --- --- 012997 00000 ------------ C 0.86 0.55 0.71 A 0.14 0.45 0.29 0000 --- --- --- --- 013019 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013028 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013527 00000 ------------ G 0.75 0.88 0.82 A 0.25 0.12 0.18 0000 --- --- --- --- 013552 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 013904 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 015297 00000 ------------ T 0.70 0.55 0.62 C 0.30 0.45 0.38 0000 --- --- --- --- 015626 00000 ------------ T 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 016557 00000 ------------ G 0.76 0.57 0.68 T 0.24 0.43 0.32 0000 --- --- --- --- 016818 00000 ------------ G 0.60 0.57 0.58 A 0.40 0.43 0.42 0000 --- --- --- --- 017575 00000 ------------ C 0.57 0.56 0.56 G 0.43 0.44 0.44 0000 --- --- --- --- 017607 00000 ------------ G 0.74 0.92 0.82 A 0.26 0.08 0.18 0000 --- --- --- --- 017888 00000 ------------ T 0.58 0.55 0.57 C 0.42 0.45 0.43 0000 --- --- --- --- 018135 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 018167 00000 ------------ - 0.58 0.57 0.57 + 0.42 0.43 0.43 0000 --- --- --- --- 018173 00000 ------------ C 0.58 0.57 0.58 T 0.42 0.42 0.42 0000 --- --- --- --- 018213 00000 ------------ A 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 018256 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 018297 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 018344 00000 ------------ G 0.59 0.57 0.58 C 0.41 0.43 0.42 0000 --- --- --- --- 018647 00000 ------------ C 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 018765 00000 ------------ A 0.58 0.57 0.57 G 0.42 0.43 0.43 0000 --- --- --- --- 019437 00000 ------------ A 0.56 0.58 0.57 G 0.44 0.42 0.43 0000 --- --- --- --- 019443 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 019447 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019670 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 019695 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019767 00000 ------------ A 0.56 0.58 0.57 G 0.44 0.42 0.43 0000 --- --- --- --- 019782 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019819 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020413 00000 ------------ G 0.54 0.57 0.56 C 0.46 0.43 0.44 0000 --- --- --- --- 020444 00000 ------------ - 0.09 0.34 0.21 + 0.91 0.66 0.79 0000 --- --- --- --- 020597 00000 ------------ A 0.52 0.57 0.55 T 0.48 0.43 0.45 0000 --- --- --- --- 020612 00000 ------------ A 0.52 0.57 0.55 G 0.48 0.43 0.45 0000 --- --- --- --- 021293 00000 ------------ A 0.57 0.55 0.56 G 0.43 0.45 0.44 0000 --- --- --- --- 021492 00000 ------------ T 0.57 0.55 0.56 C 0.43 0.45 0.44 0000 --- --- --- --- 021734 00000 ------------ C 0.56 0.57 0.57 T 0.44 0.43 0.43 0000 --- --- --- --- 021775 00000 ------------ G 0.56 0.57 0.57 C 0.44 0.43 0.43 0000 --- --- --- --- 021932 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022058 00000 ------------ T 1.00 0.89 0.95 C 0.00 0.11 0.05 0000 --- --- --- --- 022095 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022148 00000 ------------ T 0.56 0.55 0.56 G 0.44 0.45 0.44 0000 --- --- --- --- 022419 00000 ------------ C 0.56 0.57 0.56 T 0.44 0.43 0.44 0000 --- --- --- --- 022428 00000 ------------ - 0.56 0.57 0.56 + 0.44 0.43 0.44 0000 --- --- --- --- 022552 00000 ------------ A 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 022743 00790 SYNON C 0.73 0.89 0.81 T 0.27 0.11 0.19 0140 TCC TCT SER(S) SER(S) 022746 00793 SYNON A 0.94 0.98 0.96 G 0.06 0.02 0.04 0141 CTA CTG LEU(L) LEU(L) 022860 00907 SYNON T 0.56 0.57 0.56 A 0.44 0.43 0.44 0179 CCT CCA PRO(P) PRO(P) 022867 00000 ------------ A 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 022868 00000 ------------ A 0.56 0.57 0.56 G 0.44 0.43 0.44 0000 --- --- --- --- 023128 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 023508 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 023618 00000 ------------ C 0.59 0.55 0.57 T 0.41 0.45 0.43 0000 --- --- --- --- 023735 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 023875 00000 ------------ A 0.57 0.55 0.56 G 0.43 0.45 0.44 0000 --- --- --- --- 023951 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 023994 00000 ------------ G 0.78 0.57 0.69 A 0.22 0.42 0.31 0000 --- --- --- --- 024093 00000 ------------ G 0.57 0.55 0.56 C 0.43 0.45 0.44 0000 --- --- --- --- 024436 00000 ------------ T 1.00 0.90 0.95 C 0.00 0.10 0.05 0000 --- --- --- --- 024507 00000 ------------ A 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 024549 00000 ------------ G 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 024562 00000 ------------ A 0.57 0.57 0.57 G 0.43 0.43 0.43 0000 --- --- --- --- 024636 00000 ------------ G 0.57 0.57 0.57 A 0.43 0.43 0.43 0000 --- --- --- --- 024655 00000 ------------ T 0.57 0.57 0.57 C 0.43 0.43 0.43 0000 --- --- --- --- 025155 00000 ------------ T 0.58 0.57 0.57 C 0.42 0.43 0.43 0000 --- --- --- --- 025192 00000 ------------ A 0.67 0.54 0.61 G 0.33 0.46 0.39 0000 --- --- --- --- 025301 00000 ------------ G 0.59 0.57 0.58 A 0.41 0.43 0.42 0000 --- --- --- --- 025656 00000 ------------ G 0.61 0.57 0.58 C 0.39 0.43 0.42 0000 --- --- --- --- 025711 00000 ------------ T 0.60 0.57 0.58 C 0.40 0.43 0.42 0000 --- --- --- --- 025737 00000 ------------ C 0.76 0.89 0.83 T 0.24 0.11 0.17 0000 --- --- --- --- 026031 00000 ------------ A 0.52 0.57 0.54 G 0.48 0.43 0.46 0000 --- --- --- --- 026201 00000 ------------ A 0.57 0.57 0.57 T 0.43 0.43 0.43 0000 --- --- --- --- 027421 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 028130 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 028351 00000 ------------ C 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 028572 01399 SYNON T 0.98 1.00 0.99 C 0.02 0.00 0.01 0343 AAT AAC ASN(N) ASN(N) 029446 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 029492 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 029640 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029878 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030501 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 031051 00000 ------------ A 0.93 0.98 0.96 G 0.07 0.02 0.04 0000 --- --- --- --- 031548 00000 ------------ A 0.91 0.61 0.78 T 0.09 0.39 0.22 0000 --- --- --- --- 032278 01529 NON-SYN G 0.92 0.66 0.79 C 0.08 0.34 0.21 0387 GCG CCG ALA(A) PRO(P) 032419 00000 ------------ - 0.27 0.14 0.21 + 0.73 0.86 0.79 0000 --- --- --- --- 033525 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 033563 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 034286 00000 ------------ G 0.73 0.62 0.68 A 0.27 0.38 0.32 0000 --- --- --- --- 034873 01629 NON-SYN C 1.00 0.97 0.99 T 0.00 0.03 0.01 0420 GCG GTG ALA(A) VAL(V) 034946 01702 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0444 GGG GGA GLY(G) GLY(G) 035332 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035413 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 036022 00000 ------------ A 0.73 0.54 0.64 G 0.27 0.46 0.36 0000 --- --- --- --- 036098 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036396 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 036839 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036884 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 036958 00000 ------------ - 0.35 0.41 0.38 + 0.65 0.59 0.62 0000 --- --- --- --- 037094 00000 ------------ T 0.67 0.63 0.65 C 0.33 0.37 0.35 0000 --- --- --- --- 037263 00000 ------------ T 0.74 0.50 0.62 G 0.26 0.50 0.38 0000 --- --- --- --- 037646 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 038629 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 038710 00000 ------------ G 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 039068 00000 ------------ - 0.35 0.20 0.28 + 0.65 0.80 0.72 0000 --- --- --- --- 039406 00000 ------------ A 0.69 0.93 0.81 G 0.31 0.07 0.19 0000 --- --- --- --- 040893 00000 ------------ C 0.98 0.94 0.96 A 0.02 0.06 0.04 0000 --- --- --- --- 041262 00000 ------------ G 1.00 0.89 0.94 T 0.00 0.11 0.06 0000 --- --- --- --- 041359 00000 ------------ T 0.71 0.53 0.62 C 0.29 0.47 0.38 0000 --- --- --- --- 041881 00000 ------------ A 0.67 0.91 0.79 G 0.33 0.09 0.21 0000 --- --- --- --- 042248 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 043736 02306 NON-SYN G 0.95 1.00 0.97 A 0.05 0.00 0.03 0646 GTC ATC VAL(V) ILE(I) 044818 00000 ------------ C 0.60 0.80 0.70 T 0.40 0.20 0.30 0000 --- --- --- --- 044827 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 045306 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 045322 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 045394 00000 ------------ C 0.96 0.93 0.94 T 0.04 0.07 0.06 0000 --- --- --- --- 045623 00000 ------------ - 0.38 0.20 0.29 + 0.62 0.80 0.71 0000 --- --- --- --- 046590 00000 ------------ T 0.93 0.72 0.84 C 0.07 0.28 0.16 0000 --- --- --- --- 046739 00000 ------------ G 0.62 0.79 0.70 C 0.38 0.21 0.30 0000 --- --- --- --- 047245 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 047246 00000 ------------ G 0.93 0.77 0.85 A 0.07 0.23 0.15 0000 --- --- --- --- 047351 00000 ------------ - 0.68 0.57 0.62 + 0.32 0.43 0.38 0000 --- --- --- --- 047529 00000 ------------ A 0.69 0.93 0.81 T 0.31 0.07 0.19 0000 --- --- --- --- 047574 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 047582 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 048264 00000 ------------ A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 049085 00000 ------------ G 0.63 0.53 0.58 C 0.37 0.47 0.42 0000 --- --- --- --- 049804 00000 ------------ - 0.28 0.07 0.18 + 0.72 0.93 0.82 0000 --- --- --- --- 050411 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 050526 00000 ------------ T 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 050553 00000 ------------ C 0.65 0.93 0.79 A 0.35 0.07 0.21 0000 --- --- --- --- 050663 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 051066 00000 ------------ G 0.64 0.59 0.61 T 0.36 0.41 0.39 0000 --- --- --- --- 051132 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 051274 00000 ------------ G 0.73 0.57 0.64 A 0.27 0.43 0.36 0000 --- --- --- --- 051300 00000 ------------ G 0.70 0.57 0.63 A 0.30 0.43 0.37 0000 --- --- --- --- 051323 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 051359 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 051374 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 051400 00000 ------------ - 0.39 0.07 0.21 + 0.61 0.93 0.79 0000 --- --- --- --- 051444 00000 ------------ T 0.40 0.97 0.73 C 0.60 0.03 0.27 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 007285: G 007770: TC 011255: A 013552: T 013904: C 018167: AATAA 020444: G 022428: A 027421: ATCT 032419: ATATA 036958: T 039068: AAG 045623: T 047351: GCA 049804: GCGTCCTGGGCGGG 050663: GAAT 051400: AGG Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000154 00000 ------------ G 0.53 0.76 0.65 C 0.47 0.24 0.35 0000 --- --- --- --- 000423 00000 ------------ C 0.95 0.76 0.87 T 0.05 0.24 0.13 0000 --- --- --- --- 000508 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000700 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001576 00000 ------------ C 0.92 0.74 0.83 T 0.08 0.26 0.17 0000 --- --- --- --- 001745 00000 ------------ T 0.94 0.76 0.85 C 0.06 0.24 0.15 0000 --- --- --- --- 001750 00000 ------------ C 0.92 0.74 0.83 G 0.08 0.26 0.17 0000 --- --- --- --- 001751 00000 ------------ C 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 001925 00000 ------------ T 0.94 0.76 0.85 G 0.06 0.24 0.15 0000 --- --- --- --- 002018 00000 ------------ C 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 002021 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002028 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002040 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 002048 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 002275 00000 ------------ - 0.45 0.75 0.58 + 0.55 0.25 0.42 0000 --- --- --- --- 003682 00000 ------------ C 0.44 0.71 0.59 T 0.56 0.29 0.41 0000 --- --- --- --- 003846 00000 ------------ G 0.98 0.89 0.94 A 0.02 0.11 0.06 0000 --- --- --- --- 003903 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003906 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004346 00000 ------------ A 0.89 0.81 0.86 G 0.11 0.19 0.14 0000 --- --- --- --- 004378 00000 ------------ A 0.85 0.92 0.88 G 0.15 0.08 0.12 0000 --- --- --- --- 004888 00000 ------------ - 0.08 0.18 0.12 + 0.92 0.82 0.88 0000 --- --- --- --- 005035 00000 ------------ C 0.83 0.86 0.84 T 0.17 0.14 0.16 0000 --- --- --- --- 005080 00000 ------------ C 1.00 0.86 0.95 T 0.00 0.14 0.05 0000 --- --- --- --- 005843 00000 ------------ A 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 005883 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006227 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006420 00000 ------------ C 0.85 0.93 0.89 T 0.15 0.07 0.11 0000 --- --- --- --- 007001 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007370 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007482 00000 ------------ C 0.92 0.70 0.81 T 0.08 0.30 0.19 0000 --- --- --- --- 007865 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007880 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 008397 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008413 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 008764 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 009537 00000 ------------ T 0.44 0.63 0.55 C 0.56 0.37 0.45 0000 --- --- --- --- 010363 00000 ------------ G 0.95 0.74 0.85 T 0.05 0.26 0.15 0000 --- --- --- --- 010374 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010378 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010509 00000 ------------ A 0.89 0.93 0.91 C 0.11 0.07 0.09 0000 --- --- --- --- 010969 00326 5' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011190 00000 ------------ A 0.86 0.91 0.89 G 0.14 0.09 0.11 0000 --- --- --- --- 011317 00457 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0009 GCT CCT ALA(A) PRO(P) 011329 00469 NON-SYN C 1.00 0.98 0.99 T 0.00 0.02 0.01 0013 CGG TGG ARG(R) TRP(W) 011530 00000 ------------ - 0.94 0.89 0.91 + 0.06 0.11 0.09 0000 --- --- --- --- 011877 00000 ------------ C 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 011967 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011983 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 011993 00000 ------------ C 0.48 0.76 0.62 T 0.52 0.24 0.38 0000 --- --- --- --- 012724 00000 ------------ A 0.82 0.75 0.80 C 0.17 0.25 0.20 0000 --- --- --- --- 013093 00718 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0096 GAC AAC ASP(D) ASN(N) 013110 00735 SYNON G 0.93 0.89 0.91 A 0.07 0.11 0.09 0101 CAG CAA GLN(Q) GLN(Q) 013346 00971 NON-SYN C 0.93 0.89 0.91 T 0.07 0.11 0.09 0180 TCG TTG SER(S) LEU(L) 013365 00990 SYNON C 0.91 0.76 0.83 T 0.09 0.24 0.17 0186 GCC GCT ALA(A) ALA(A) 013567 00000 ------------ A 0.93 0.91 0.92 G 0.07 0.09 0.08 0000 --- --- --- --- 013627 00000 ------------ T 0.52 0.76 0.64 C 0.48 0.24 0.36 0000 --- --- --- --- 014115 00000 ------------ T 0.94 0.76 0.85 G 0.06 0.24 0.15 0000 --- --- --- --- 014193 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014194 00000 ------------ G 0.52 0.76 0.64 A 0.48 0.24 0.36 0000 --- --- --- --- 014852 00000 ------------ C 0.85 0.76 0.81 T 0.15 0.24 0.19 0000 --- --- --- --- 015309 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 015792 00000 ------------ A 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 015935 00000 ------------ C 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 015996 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016003 00000 ------------ T 0.91 0.93 0.92 C 0.09 0.07 0.08 0000 --- --- --- --- 016069 00000 ------------ G 0.96 0.76 0.86 A 0.04 0.24 0.14 0000 --- --- --- --- 016228 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016260 00000 ------------ T 0.88 0.74 0.81 C 0.12 0.26 0.19 0000 --- --- --- --- 016385 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 016971 00000 ------------ C 0.89 0.91 0.90 A 0.11 0.09 0.10 0000 --- --- --- --- 017080 00000 ------------ G 0.52 0.76 0.64 A 0.48 0.24 0.36 0000 --- --- --- --- 017277 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 017460 01590 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017644 01774 3' UTR - 0.52 0.76 0.64 + 0.48 0.24 0.36 0000 --- --- --- --- 017687 01817 3' UTR G 0.91 0.93 0.92 A 0.09 0.07 0.08 0000 --- --- --- --- 017937 02067 3' UTR A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017977 02107 3' UTR C 0.88 0.91 0.89 T 0.12 0.09 0.11 0000 --- --- --- --- 018199 00000 ------------ C 0.88 0.76 0.82 T 0.12 0.24 0.18 0000 --- --- --- --- 018223 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- 018690 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 018865 00000 ------------ C 0.55 0.76 0.66 T 0.45 0.24 0.34 0000 --- --- --- --- 019085 00000 ------------ C 0.88 0.90 0.89 T 0.12 0.10 0.11 0000 --- --- --- --- 019495 00000 ------------ A 0.98 0.76 0.87 G 0.02 0.24 0.13 0000 --- --- --- --- 019512 00000 ------------ G 0.59 0.76 0.67 A 0.41 0.24 0.33 0000 --- --- --- --- 019527 00000 ------------ A 0.94 0.89 0.91 T 0.06 0.11 0.09 0000 --- --- --- --- 019724 00000 ------------ C 0.93 0.89 0.91 T 0.07 0.11 0.09 0000 --- --- --- --- 020338 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020353 00000 ------------ C 0.96 0.76 0.86 T 0.04 0.24 0.14 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002040: C 002275: GGTAGAGTCA 004888: A 007880: AGCTAA 011530: GGGA 017644: CTTTA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000214 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000282 00000 ------------ G 0.80 0.82 0.81 A 0.20 0.18 0.19 0000 --- --- --- --- 000346 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000352 00000 ------------ G 0.96 0.93 0.94 A 0.04 0.07 0.06 0000 --- --- --- --- 000657 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001009 00000 ------------ G 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 001078 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 001278 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 001440 00000 ------------ A 0.90 0.93 0.91 G 0.10 0.07 0.09 0000 --- --- --- --- 001476 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001893 00000 ------------ A 0.85 0.93 0.89 G 0.15 0.07 0.11 0000 --- --- --- --- 002642 00860 3' UTR A 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 002984 01202 3' UTR C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 003018 01236 3' UTR G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 003746 00000 ------------ G 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 004013 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 004040 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 004101 00000 ------------ G 0.90 0.87 0.88 A 0.10 0.13 0.12 0000 --- --- --- --- 004205 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004231 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004366 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 004671 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004711 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004765 00000 ------------ G 0.93 0.88 0.91 T 0.07 0.12 0.09 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 001278: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000132 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000577 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000593 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 000766 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002956 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003490 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003492 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003633 00000 ------------ G 0.91 0.95 0.93 A 0.09 0.05 0.07 0000 --- --- --- --- 003878 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 004224 00000 ------------ C 0.80 0.52 0.67 T 0.20 0.48 0.33 0000 --- --- --- --- 005066 00000 ------------ G 0.82 0.56 0.69 A 0.18 0.44 0.31 0000 --- --- --- --- 005186 00000 ------------ C 1.00 0.85 0.92 A 0.00 0.15 0.08 0000 --- --- --- --- 005400 00000 ------------ C 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 005809 00000 ------------ G 0.93 1.00 0.96 C 0.07 0.00 0.04 0000 --- --- --- --- 006265 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007477 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 007484 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 007620 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007977 00000 ------------ C 0.88 0.95 0.92 T 0.12 0.05 0.08 0000 --- --- --- --- 008684 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008790 00768 SYNON C 1.00 0.95 0.98 T 0.00 0.05 0.02 0206 GAC GAT ASP(D) ASP(D) 008823 00801 SYNON C 0.96 1.00 0.98 A 0.04 0.00 0.02 0217 GGC GGA GLY(G) GLY(G) 008922 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009188 00000 ------------ T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 009518 00000 ------------ C 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 009606 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009716 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 010045 00000 ------------ G 0.52 0.52 0.52 A 0.48 0.48 0.48 0000 --- --- --- --- 010051 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010427 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010614 00000 ------------ C 0.50 0.52 0.51 G 0.50 0.48 0.49 0000 --- --- --- --- 010618 00000 ------------ G 0.77 0.96 0.86 T 0.23 0.04 0.14 0000 --- --- --- --- 010689 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010751 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011439 01496 3' UTR C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 011683 01740 3' UTR T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 012174 02231 3' UTR G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 012217 02274 3' UTR G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 012328 02385 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012467 02524 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012517 02574 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012520 02577 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 012600 02657 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012734 02791 3' UTR A 0.77 0.96 0.86 T 0.23 0.04 0.14 0000 --- --- --- --- 012782 02839 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012813 02870 3' UTR T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013277 03334 3' UTR - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 013309 03366 3' UTR G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 013311 03368 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013512 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 013553 00000 ------------ - 0.21 0.02 0.12 + 0.79 0.98 0.88 0000 --- --- --- --- 013570 00000 ------------ - 0.23 0.02 0.13 + 0.77 0.98 0.87 0000 --- --- --- --- 013822 00000 ------------ - 1.00 0.92 0.96 + 0.00 0.08 0.04 0000 --- --- --- --- 014050 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 014132 00000 ------------ C 0.90 0.97 0.94 T 0.10 0.03 0.06 0000 --- --- --- --- 014171 00000 ------------ G 0.95 1.00 0.97 A 0.05 0.00 0.03 0000 --- --- --- --- 014180 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 014525 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014891 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014947 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 013277: ACACA 013553: CAGGTCGTAAGC 013570: TG 013822: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000118 00000 ------------ A 0.42 0.64 0.54 G 0.58 0.36 0.46 0000 --- --- --- --- 000130 00000 ------------ G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 000356 00000 ------------ C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 000511 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000653 00000 ------------ C 0.98 0.96 0.97 A 0.02 0.04 0.03 0000 --- --- --- --- 000685 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 001020 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001148 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 001684 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002066 00057 5' UTR - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 002766 00445 FRAME SHIFT - 0.93 1.00 0.96 + 0.07 0.00 0.04 0105 G-- GCG --- --- 003299 00978 NON-SYN G 0.50 0.52 0.51 C 0.50 0.48 0.49 0283 GAG CAG GLU(E) GLN(Q) 004311 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004584 00000 ------------ A 0.92 1.00 0.95 G 0.08 0.00 0.05 0000 --- --- --- --- 004591 00000 ------------ C 0.92 1.00 0.95 T 0.08 0.00 0.05 0000 --- --- --- --- 004914 00000 ------------ C 0.52 0.89 0.70 T 0.48 0.11 0.30 0000 --- --- --- --- 005346 00000 ------------ G 0.61 0.55 0.58 C 0.39 0.45 0.42 0000 --- --- --- --- 005814 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 005837 00000 ------------ A 0.42 0.59 0.50 G 0.58 0.41 0.50 0000 --- --- --- --- 005901 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005931 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005958 00000 ------------ T 0.60 0.50 0.55 A 0.40 0.50 0.45 0000 --- --- --- --- 006388 00000 ------------ C 0.94 0.97 0.95 T 0.06 0.03 0.05 0000 --- --- --- --- 006553 00000 ------------ C 0.92 0.95 0.93 G 0.08 0.05 0.07 0000 --- --- --- --- 006671 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 006874 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 006914 00000 ------------ A 0.86 0.65 0.75 G 0.14 0.35 0.25 0000 --- --- --- --- 007777 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007798 00000 ------------ G 0.71 0.62 0.67 A 0.29 0.38 0.33 0000 --- --- --- --- 008021 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 008085 00000 ------------ G 0.50 0.63 0.56 C 0.50 0.37 0.44 0000 --- --- --- --- 008212 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008289 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008355 00000 ------------ - 0.33 0.07 0.20 + 0.67 0.93 0.80 0000 --- --- --- --- 008660 00000 ------------ A 0.85 0.70 0.78 G 0.15 0.30 0.22 0000 --- --- --- --- 008682 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 008820 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 008948 00000 ------------ G 0.93 0.98 0.96 A 0.07 0.02 0.04 0000 --- --- --- --- 009198 01828 NON-SYN C 0.89 1.00 0.95 T 0.11 0.00 0.05 0566 ACC ATC THR(T) ILE(I) 009289 00000 ------------ T 0.93 0.70 0.81 C 0.07 0.30 0.19 0000 --- --- --- --- 009372 01838 SYNON C 0.89 1.00 0.94 T 0.11 0.00 0.06 0569 GGC GGT GLY(G) GLY(G) 009381 01847 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0572 GCG GCA ALA(A) ALA(A) 009407 01873 NON-SYN C 0.95 1.00 0.98 T 0.05 0.00 0.02 0581 ACG ATG THR(T) MET(M) 009618 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010489 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 010589 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010817 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 011003 02054 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0641 GCG GCA ALA(A) ALA(A) 011103 02154 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 011629 02680 3' UTR A 0.57 0.43 0.50 G 0.43 0.57 0.50 0000 --- --- --- --- 011991 03042 3' UTR G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 012008 03059 3' UTR C 0.93 0.98 0.95 T 0.07 0.02 0.05 0000 --- --- --- --- 012846 03897 3' UTR A 0.44 0.61 0.51 G 0.56 0.39 0.49 0000 --- --- --- --- 012847 03898 3' UTR T 0.44 0.62 0.51 A 0.56 0.38 0.49 0000 --- --- --- --- 012920 03971 3' UTR T 0.65 0.65 0.65 C 0.35 0.35 0.35 0000 --- --- --- --- 012921 03972 3' UTR G 0.80 1.00 0.89 T 0.20 0.00 0.11 0000 --- --- --- --- 013004 04055 3' UTR G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 013045 04096 3' UTR T 0.93 0.97 0.95 A 0.07 0.03 0.05 0000 --- --- --- --- 013222 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 013351 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013463 00000 ------------ A 0.83 0.96 0.89 G 0.17 0.04 0.11 0000 --- --- --- --- 013469 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013573 00000 ------------ G 0.96 0.72 0.84 A 0.04 0.28 0.16 0000 --- --- --- --- 013699 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013919 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 014045 00000 ------------ G 0.79 1.00 0.90 A 0.21 0.00 0.10 0000 --- --- --- --- 014235 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 014331 00000 ------------ G 0.97 0.97 0.97 A 0.03 0.03 0.03 0000 --- --- --- --- 014443 00000 ------------ G 0.87 0.95 0.91 A 0.13 0.05 0.09 0000 --- --- --- --- 014459 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 014465 00000 ------------ G 0.97 0.95 0.96 C 0.03 0.05 0.04 0000 --- --- --- --- 014466 00000 ------------ G 0.95 0.74 0.84 A 0.05 0.26 0.16 0000 --- --- --- --- 014526 00000 ------------ G 0.95 0.97 0.96 A 0.05 0.03 0.04 0000 --- --- --- --- 014976 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015058 00000 ------------ T 0.82 0.98 0.90 C 0.18 0.02 0.10 0000 --- --- --- --- 015121 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015127 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015158 00000 ------------ T 0.50 0.67 0.59 C 0.50 0.33 0.41 0000 --- --- --- --- 015586 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015627 00000 ------------ T 0.60 0.67 0.64 C 0.40 0.33 0.36 0000 --- --- --- --- 015688 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002066: G 002766: CGG 008355: GTGTCTGC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000104 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 000548 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000868 00000 ------------ C 0.69 0.98 0.84 T 0.31 0.02 0.16 0000 --- --- --- --- 001099 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001610 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 002523 00000 ------------ - 0.93 0.97 0.95 + 0.07 0.03 0.05 0000 --- --- --- --- 002886 00000 ------------ A 0.61 0.97 0.79 G 0.39 0.03 0.21 0000 --- --- --- --- 003101 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 003233 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003255 00000 ------------ T 0.63 0.60 0.61 C 0.37 0.40 0.39 0000 --- --- --- --- 003313 00000 ------------ C 0.57 0.89 0.72 T 0.43 0.11 0.28 0000 --- --- --- --- 003492 00000 ------------ - 0.17 0.46 0.33 + 0.82 0.54 0.67 0000 --- --- --- --- 003525 00000 ------------ A 0.52 0.89 0.72 G 0.48 0.11 0.28 0000 --- --- --- --- 004008 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004055 00000 ------------ A 0.64 0.89 0.78 C 0.36 0.11 0.22 0000 --- --- --- --- 004187 00000 ------------ C 0.93 0.93 0.93 G 0.07 0.07 0.07 0000 --- --- --- --- 005014 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005433 00000 ------------ A 0.91 0.91 0.91 G 0.09 0.09 0.09 0000 --- --- --- --- 006116 00000 ------------ G 0.52 0.89 0.71 A 0.48 0.11 0.29 0000 --- --- --- --- 006132 00000 ------------ A 0.52 0.89 0.71 G 0.48 0.11 0.29 0000 --- --- --- --- 006880 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008114 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008143 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008308 00000 ------------ G 0.90 0.91 0.91 A 0.10 0.09 0.09 0000 --- --- --- --- 008412 00000 ------------ A 0.79 0.54 0.66 G 0.21 0.46 0.34 0000 --- --- --- --- 008522 00000 ------------ G 0.64 0.98 0.82 T 0.36 0.02 0.18 0000 --- --- --- --- 008773 00000 ------------ C 0.69 0.53 0.61 T 0.31 0.47 0.39 0000 --- --- --- --- 009004 00000 ------------ C 0.90 0.93 0.92 T 0.10 0.07 0.08 0000 --- --- --- --- 009064 00000 ------------ C 0.67 0.57 0.62 T 0.33 0.43 0.38 0000 --- --- --- --- 009094 00000 ------------ C 0.65 0.98 0.82 G 0.35 0.02 0.18 0000 --- --- --- --- 009335 00000 ------------ - 0.21 0.42 0.32 + 0.79 0.57 0.68 0000 --- --- --- --- 009431 00440 NON-SYN C 0.96 1.00 0.98 T 0.04 0.00 0.02 0125 GCG GTG ALA(A) VAL(V) 009437 00446 NON-SYN T 0.63 0.98 0.80 G 0.37 0.02 0.20 0127 TTC TGC PHE(F) CYS(C) 009959 00000 ------------ - 0.91 0.90 0.91 + 0.09 0.10 0.09 0000 --- --- --- --- 009972 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009980 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 010034 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010189 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010701 00000 ------------ C 0.87 0.91 0.89 T 0.13 0.09 0.11 0000 --- --- --- --- 010703 00000 ------------ A 0.83 0.54 0.68 C 0.17 0.46 0.32 0000 --- --- --- --- 010713 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010878 00000 ------------ A 0.78 0.98 0.88 G 0.22 0.02 0.12 0000 --- --- --- --- 011152 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011196 00000 ------------ T 0.71 0.57 0.64 C 0.29 0.43 0.36 0000 --- --- --- --- 012354 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012428 00000 ------------ - 0.20 0.02 0.11 + 0.80 0.98 0.89 0000 --- --- --- --- 012480 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012789 00000 ------------ G 0.61 0.52 0.57 T 0.39 0.48 0.43 0000 --- --- --- --- 014132 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 014224 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 014939 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015208 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015746 02361 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0765 CCC CCT PRO(P) PRO(P) 015747 02362 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0766 GCC CCC ALA(A) PRO(P) 016657 03272 3' UTR A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 016904 03519 3' UTR T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017031 03646 3' UTR G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 017677 04292 3' UTR T 0.95 1.00 0.97 C 0.05 0.00 0.03 0000 --- --- --- --- 018009 00000 ------------ - 0.05 0.00 0.03 + 0.95 1.00 0.97 0000 --- --- --- --- 019256 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019384 00000 ------------ G 0.97 0.85 0.91 A 0.03 0.15 0.09 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002523: G 003492: AA 009335: CCT 009959: A 012428: G 018009: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000574 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 000685 00000 ------------ C 0.54 1.00 0.77 T 0.46 0.00 0.23 0000 --- --- --- --- 000718 00000 ------------ G 0.85 0.41 0.64 C 0.15 0.59 0.36 0000 --- --- --- --- 000945 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 000947 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001596 00000 ------------ G 0.90 0.68 0.79 T 0.10 0.32 0.21 0000 --- --- --- --- 001625 00000 ------------ A 0.54 1.00 0.77 G 0.46 0.00 0.23 0000 --- --- --- --- 001823 00000 ------------ A 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002241 00205 SYNON A 0.60 0.45 0.53 G 0.40 0.55 0.47 0012 CCA CCG PRO(P) PRO(P) 002547 00000 ------------ A 0.57 1.00 0.79 G 0.43 0.00 0.21 0000 --- --- --- --- 002608 00000 ------------ T 0.55 1.00 0.78 C 0.45 0.00 0.22 0000 --- --- --- --- 002890 00000 ------------ A 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 002991* 003047 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003443 00000 ------------ G 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 003802 00000 ------------ G 0.94 0.93 0.94 C 0.06 0.07 0.06 0000 --- --- --- --- 003975 00000 ------------ G 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 003976 00000 ------------ C 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 004071 00000 ------------ G 0.85 0.41 0.64 A 0.15 0.59 0.36 0000 --- --- --- --- 004506 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005587 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005664 00000 ------------ T 0.88 0.64 0.76 C 0.12 0.36 0.24 0000 --- --- --- --- 005749 00000 ------------ G 0.79 0.93 0.86 A 0.21 0.07 0.14 0000 --- --- --- --- 005829 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 006196 00000 ------------ C 0.89 0.43 0.66 T 0.11 0.57 0.34 0000 --- --- --- --- 006201 00000 ------------ A 0.89 0.43 0.66 G 0.11 0.57 0.34 0000 --- --- --- --- 006247 00000 ------------ - 0.62 1.00 0.81 + 0.38 0.00 0.19 0000 --- --- --- --- 006410 00000 ------------ C 0.87 0.48 0.68 T 0.13 0.52 0.32 0000 --- --- --- --- 006923 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006947 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007205 00000 ------------ G 0.79 0.65 0.72 T 0.21 0.35 0.28 0000 --- --- --- --- 007299 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007429 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007518 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007776 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008727 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 009145 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 009375 00000 ------------ T 0.56 1.00 0.78 G 0.44 0.00 0.22 0000 --- --- --- --- 009410 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010126 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010186 00393 NON-SYN C 0.86 1.00 0.93 T 0.14 0.00 0.07 0075 CCG CTG PRO(P) LEU(L) 010544 00531 NON-SYN G 0.98 0.96 0.97 A 0.02 0.04 0.03 0121 CGG CAG ARG(R) GLN(Q) 010718 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 010736 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010841 00000 ------------ C 0.92 0.65 0.79 T 0.08 0.35 0.21 0000 --- --- --- --- 011186 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 011327 00000 ------------ G 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 011678 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 011839 00000 ------------ C 0.58 0.57 0.57 G 0.42 0.43 0.43 0000 --- --- --- --- 012502 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 012679 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013178 00000 ------------ A 0.64 0.45 0.55 G 0.36 0.55 0.45 0000 --- --- --- --- 013281 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013899 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 013900 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 015042 01870 3' UTR G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 015475 00000 ------------ C 0.80 1.00 0.90 T 0.20 0.00 0.10 0000 --- --- --- --- 015518 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015536 00000 ------------ - 0.89 0.70 0.79 + 0.11 0.30 0.21 0000 --- --- --- --- 015549 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 015660 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015799 00000 ------------ A 0.73 1.00 0.86 G 0.27 0.00 0.14 0000 --- --- --- --- 015806 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016017 00000 ------------ - 0.50 0.39 0.45 + 0.50 0.61 0.55 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 006247: T 015536: T 016017: CC The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 002991 A 0.00 0.02 0.01 C 0.93 0.98 0.96 G 0.07 0.00 0.03 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000140 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000146 00000 ------------ T 0.61 0.91 0.76 A 0.39 0.09 0.24 0000 --- --- --- --- 000169 00000 ------------ G 0.96 0.96 0.96 T 0.04 0.04 0.04 0000 --- --- --- --- 000170 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 000714 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000767 00000 ------------ G 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 001182 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001420 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 001512 00000 ------------ G 0.86 1.00 0.94 A 0.14 0.00 0.06 0000 --- --- --- --- 001794 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 002636 00000 ------------ G 0.76 1.00 0.89 C 0.24 0.00 0.11 0000 --- --- --- --- 002660 00000 ------------ A 0.76 1.00 0.89 G 0.24 0.00 0.11 0000 --- --- --- --- 002666 00000 ------------ C 0.76 1.00 0.89 G 0.24 0.00 0.11 0000 --- --- --- --- 003386 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 003605 00000 ------------ G 0.66 0.98 0.84 C 0.34 0.02 0.16 0000 --- --- --- --- 003805 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003831 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 004234 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 004876 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 005045 00000 ------------ - 0.42 0.02 0.22 + 0.58 0.98 0.78 0000 --- --- --- --- 005189 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005240 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 005317 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005426 00000 ------------ G 0.73 1.00 0.86 C 0.27 0.00 0.14 0000 --- --- --- --- 006056 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006936 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007139 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007311 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 007601 00000 ------------ T 0.70 0.70 0.70 C 0.30 0.30 0.30 0000 --- --- --- --- 007803 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 007856 00000 ------------ G 0.97 0.89 0.93 A 0.03 0.11 0.07 0000 --- --- --- --- 008099 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008549 00000 ------------ C 0.78 0.63 0.71 T 0.22 0.37 0.29 0000 --- --- --- --- 008594 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009313 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 009320 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009417 00000 ------------ A 0.93 0.97 0.95 G 0.07 0.03 0.05 0000 --- --- --- --- 009562 00000 ------------ C 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 009590 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009680 00000 ------------ T 0.93 0.95 0.94 C 0.07 0.05 0.06 0000 --- --- --- --- 009778 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 009927 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009966 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 010226 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010251 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 010519 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011840 00000 ------------ - 0.09 0.05 0.07 + 0.91 0.95 0.93 0000 --- --- --- --- 012000 00000 ------------ G 0.98 0.90 0.94 A 0.02 0.10 0.06 0000 --- --- --- --- 012165 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012372 00000 ------------ C 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 012773 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 012778 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013188 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 013473 00000 ------------ - 0.07 0.00 0.03 + 0.93 1.00 0.97 0000 --- --- --- --- 013533 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013541 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013682 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013765 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 013822 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 013884 00000 ------------ G 0.77 0.93 0.84 A 0.23 0.07 0.16 0000 --- --- --- --- 013946 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 014315 00000 ------------ C 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 014325 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 014378 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 014941 00000 ------------ A 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 015471 00000 ------------ G 0.97 0.77 0.89 A 0.03 0.23 0.11 0000 --- --- --- --- 015487 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015517 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 015619 00000 ------------ T 0.80 0.78 0.79 G 0.20 0.22 0.21 0000 --- --- --- --- 015845 00000 ------------ T 0.89 0.97 0.93 C 0.11 0.03 0.07 0000 --- --- --- --- 016264 00000 ------------ A 0.94 0.96 0.95 G 0.06 0.04 0.05 0000 --- --- --- --- 016387 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016467 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016648 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016650 00000 ------------ T 0.86 0.87 0.87 G 0.14 0.13 0.13 0000 --- --- --- --- 016781 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 016786 00000 ------------ G 0.71 0.85 0.79 A 0.29 0.15 0.21 0000 --- --- --- --- 016891 00000 ------------ C 0.92 0.96 0.94 T 0.08 0.04 0.06 0000 --- --- --- --- 017253 00000 ------------ T 0.87 0.80 0.83 C 0.13 0.20 0.17 0000 --- --- --- --- 017304 00000 ------------ C 0.95 1.00 0.97 T 0.05 0.00 0.03 0000 --- --- --- --- 017436 00000 ------------ - 0.90 0.80 0.85 + 0.10 0.20 0.15 0000 --- --- --- --- 017558 00000 ------------ T 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 017592 00000 ------------ T 0.88 0.80 0.84 G 0.12 0.20 0.16 0000 --- --- --- --- 017669 00000 ------------ G 0.97 0.82 0.90 A 0.03 0.17 0.10 0000 --- --- --- --- 017748 00000 ------------ A 0.95 0.80 0.87 G 0.05 0.20 0.13 0000 --- --- --- --- 017940 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 018073 00000 ------------ C 0.89 0.82 0.86 T 0.11 0.18 0.14 0000 --- --- --- --- 018176 00000 ------------ G 0.87 0.84 0.86 C 0.13 0.16 0.14 0000 --- --- --- --- 018967 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 019037 00000 ------------ - 0.00 0.05 0.02 + 1.00 0.95 0.98 0000 --- --- --- --- 019057 00000 ------------ A 0.91 0.84 0.88 G 0.09 0.16 0.12 0000 --- --- --- --- 019117 00000 ------------ T 0.91 0.84 0.88 C 0.09 0.16 0.12 0000 --- --- --- --- 019513 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019828 00000 ------------ T 0.81 0.78 0.80 C 0.19 0.22 0.20 0000 --- --- --- --- 020066 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020142 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020170 00000 ------------ - 0.06 0.23 0.14 + 0.94 0.77 0.86 0000 --- --- --- --- 020507 00000 ------------ T 0.83 0.76 0.80 G 0.17 0.24 0.20 0000 --- --- --- --- 020531 00000 ------------ T 0.98 0.86 0.92 A 0.02 0.14 0.08 0000 --- --- --- --- 020577 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020974 00000 ------------ C 0.97 0.85 0.91 T 0.03 0.15 0.09 0000 --- --- --- --- 020980 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 021807 00000 ------------ C 0.94 0.79 0.86 G 0.06 0.21 0.14 0000 --- --- --- --- 021927 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 022109 00000 ------------ A 0.97 0.84 0.90 G 0.03 0.16 0.10 0000 --- --- --- --- 022309 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 022739 00000 ------------ C 1.00 0.94 0.97 T 0.00 0.06 0.03 0000 --- --- --- --- 023040 00000 ------------ - 0.03 0.19 0.11 + 0.97 0.81 0.89 0000 --- --- --- --- 023090 00000 ------------ G 0.85 0.75 0.80 C 0.15 0.25 0.20 0000 --- --- --- --- 023224 00000 ------------ T 0.87 0.78 0.83 A 0.13 0.22 0.17 0000 --- --- --- --- 023302 00000 ------------ G 0.98 0.84 0.91 A 0.02 0.16 0.09 0000 --- --- --- --- 023326 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023357 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023392 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023484 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023538 00000 ------------ A 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 023741 00257 SYNON A 0.80 0.80 0.80 G 0.20 0.20 0.20 0056 AAA AAG LYS(K) LYS(K) 023764 00000 ------------ A 0.80 0.80 0.80 G 0.20 0.20 0.20 0000 --- --- --- --- 023766 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023819 00000 ------------ C 0.87 0.80 0.83 T 0.13 0.20 0.17 0000 --- --- --- --- 023830 00000 ------------ G 0.65 0.52 0.59 A 0.35 0.48 0.41 0000 --- --- --- --- 024104 00000 ------------ C 1.00 0.83 0.93 T 0.00 0.17 0.07 0000 --- --- --- --- 024881 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 024893 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 024987 00000 ------------ C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 025236 00000 ------------ G 0.78 0.78 0.78 A 0.22 0.23 0.22 0000 --- --- --- --- 025467 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 025687 00000 ------------ T 1.00 0.87 0.93 C 0.00 0.13 0.07 0000 --- --- --- --- 025693 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 025757 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025778 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 025990 00000 ------------ T 0.96 0.87 0.91 A 0.04 0.13 0.09 0000 --- --- --- --- 026077 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 026117 00000 ------------ G 0.98 0.85 0.91 A 0.02 0.15 0.09 0000 --- --- --- --- 026140 00000 ------------ A 0.89 0.96 0.92 C 0.11 0.04 0.08 0000 --- --- --- --- 026284 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 026406 00000 ------------ - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 026607 00000 ------------ T 0.75 0.65 0.70 G 0.25 0.35 0.30 0000 --- --- --- --- 026809 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027101 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 027271 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027691 00000 ------------ C 0.87 0.80 0.83 T 0.13 0.20 0.17 0000 --- --- --- --- 027754 00676 NON-SYN T 0.82 0.80 0.80 G 0.18 0.20 0.20 0196 ATG AGG MET(M) ARG(R) 027861 00783 NON-SYN G 1.00 0.95 0.98 A 0.00 0.05 0.02 0232 GAA AAA GLU(E) LYS(K) 028150 00000 ------------ T 0.90 0.87 0.88 C 0.10 0.13 0.12 0000 --- --- --- --- 028591 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 028698 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 028828 00894 NON-SYN A 0.97 1.00 0.99 C 0.03 0.00 0.01 0269 ACA CCA THR(T) PRO(P) 029000 00000 ------------ G 1.00 0.86 0.92 A 0.00 0.14 0.08 0000 --- --- --- --- 030160 00000 ------------ A 0.88 0.80 0.84 C 0.12 0.20 0.16 0000 --- --- --- --- 030971 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031590 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 031741 00000 ------------ C 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 032842 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 032855 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 032903 00000 ------------ C 1.00 0.95 0.97 T 0.00 0.05 0.03 0000 --- --- --- --- 032974 00000 ------------ A 0.75 0.83 0.79 G 0.25 0.17 0.21 0000 --- --- --- --- 033031 00000 ------------ T 0.74 0.81 0.77 C 0.26 0.19 0.23 0000 --- --- --- --- 033088 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 033741 00000 ------------ G 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 034173 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 035137 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 035180 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 035199 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 036413 00000 ------------ T 1.00 0.94 0.97 C 0.00 0.06 0.03 0000 --- --- --- --- 036590 00000 ------------ T 0.96 0.95 0.96 C 0.04 0.05 0.04 0000 --- --- --- --- 036772 00000 ------------ A 0.93 0.85 0.89 G 0.07 0.15 0.11 0000 --- --- --- --- 036825 00991 NON-SYN C 0.98 1.00 0.99 G 0.02 0.00 0.01 0301 CCT CGT PRO(P) ARG(R) 037098 00000 ------------ G 0.84 0.86 0.85 A 0.16 0.14 0.15 0000 --- --- --- --- 037226 00000 ------------ C 0.98 0.84 0.91 T 0.02 0.16 0.09 0000 --- --- --- --- 037476 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 037489 00000 ------------ G 0.93 0.76 0.85 A 0.07 0.24 0.15 0000 --- --- --- --- 037490 00000 ------------ A 0.98 0.80 0.89 C 0.02 0.20 0.11 0000 --- --- --- --- 037592 00000 ------------ A 0.98 0.80 0.89 G 0.02 0.20 0.11 0000 --- --- --- --- 037715 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 038317 00000 ------------ C 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 038345 00000 ------------ C 0.85 0.76 0.81 T 0.15 0.24 0.19 0000 --- --- --- --- 038386 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 038617 00000 ------------ T 0.93 0.76 0.85 C 0.07 0.24 0.15 0000 --- --- --- --- 038719 00000 ------------ C 0.89 0.83 0.86 T 0.11 0.17 0.14 0000 --- --- --- --- 039023 00000 ------------ T 1.00 0.95 0.96 C 0.00 0.05 0.04 0000 --- --- --- --- 039122 00000 ------------ C 1.00 0.95 0.97 G 0.00 0.05 0.03 0000 --- --- --- --- 039155 00000 ------------ G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 039261 00000 ------------ G 1.00 0.95 0.97 A 0.00 0.05 0.03 0000 --- --- --- --- 040375 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 041253 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 042065 01663 3' UTR A 0.65 0.54 0.60 G 0.35 0.46 0.40 0000 --- --- --- --- 042092 01690 3' UTR C 0.71 0.57 0.64 T 0.29 0.43 0.36 0000 --- --- --- --- 042244 01842 3' UTR - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 042264 01862 3' UTR C 0.85 0.91 0.88 A 0.15 0.09 0.12 0000 --- --- --- --- 042330 01928 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 042355 01953 3' UTR C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 042398 01996 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 042451 02049 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 042506 02104 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042799 02397 3' UTR C 0.48 0.74 0.60 T 0.52 0.26 0.40 0000 --- --- --- --- 043187 02785 3' UTR C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 043188 02786 3' UTR C 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 043299 02897 3' UTR G 0.94 0.80 0.87 A 0.06 0.20 0.13 0000 --- --- --- --- 043371 02969 3' UTR A 0.92 0.95 0.93 G 0.08 0.05 0.07 0000 --- --- --- --- 043378 02976 3' UTR T 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 043437 03035 3' UTR C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 043521 03119 3' UTR G 0.90 0.96 0.93 A 0.10 0.04 0.07 0000 --- --- --- --- 044132 00000 ------------ A 0.78 0.96 0.87 G 0.22 0.04 0.13 0000 --- --- --- --- 044424 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 044507 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 044560 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 044703 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 044747 00000 ------------ G 0.77 0.43 0.61 A 0.23 0.57 0.39 0000 --- --- --- --- 045022 00000 ------------ C 0.90 0.93 0.92 T 0.10 0.07 0.08 0000 --- --- --- --- 045159 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 045240 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 045361 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003831: C 005045: ATTC 011840: TGAGCCC 013188: G 013473: C 017436: GAAT 019037: A 020170: TTCTTT 023040: TG 025467: T 026406: GGACTGCGGAGAGTAGCG 042244: GTTT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000316 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 000887 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 003741 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 003878 00000 ------------ - 0.50 0.88 0.68 + 0.50 0.12 0.32 0000 --- --- --- --- 004058 00000 ------------ T 0.97 0.94 0.96 C 0.03 0.06 0.04 0000 --- --- --- --- 004077 00000 ------------ C 0.95 0.97 0.96 G 0.05 0.03 0.04 0000 --- --- --- --- 004163 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004802 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005609 00000 ------------ G 0.86 0.95 0.91 C 0.14 0.05 0.09 0000 --- --- --- --- 005746 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005796 00000 ------------ G 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 005799 00000 ------------ C 0.95 0.98 0.96 A 0.05 0.02 0.04 0000 --- --- --- --- 006525 00000 ------------ G 1.00 0.95 0.98 A 0.00 0.05 0.02 0000 --- --- --- --- 007330 01121 3' UTR A 0.95 0.96 0.96 C 0.05 0.04 0.04 0000 --- --- --- --- 007584 01375 3' UTR A 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 007826 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 008326 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008562 00000 ------------ C 1.00 0.89 0.95 A 0.00 0.11 0.05 0000 --- --- --- --- 008845 00000 ------------ - 0.62 0.11 0.37 + 0.38 0.89 0.63 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003878: CTGGA 008845: G Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000138 00000 ------------ A 0.87 0.72 0.79 G 0.13 0.28 0.21 0000 --- --- --- --- 000248 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000305 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 000987 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001175* 001533 00000 ------------ C 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 001612 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001614 00000 ------------ G 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 001851 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001930 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001953 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002114 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003698 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003760 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003889 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003968 00000 ------------ T 0.56 0.59 0.57 C 0.44 0.41 0.43 0000 --- --- --- --- 004195 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004417 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 004534 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 005093 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005122 00000 ------------ - 0.90 0.72 0.81 + 0.10 0.28 0.19 0000 --- --- --- --- 005137 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005173 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 005223 00000 ------------ C 0.94 0.72 0.83 T 0.06 0.28 0.17 0000 --- --- --- --- 005263 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005359 00000 ------------ C 0.94 0.72 0.83 T 0.06 0.28 0.17 0000 --- --- --- --- 005505 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005537 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 005900 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 006147 00000 ------------ A 0.90 0.72 0.81 G 0.10 0.28 0.19 0000 --- --- --- --- 006525 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 006577 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 007118 00000 ------------ T 1.00 0.93 0.97 C 0.00 0.07 0.03 0000 --- --- --- --- 007141 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007428 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 007508 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 007880 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008116 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008129 00000 ------------ T 0.90 0.74 0.82 C 0.10 0.26 0.18 0000 --- --- --- --- 008213 00000 ------------ C 0.90 0.74 0.82 A 0.10 0.26 0.18 0000 --- --- --- --- 008331 00000 ------------ C 0.90 0.74 0.82 G 0.10 0.26 0.18 0000 --- --- --- --- 008454 00000 ------------ C 0.94 0.74 0.84 T 0.06 0.26 0.16 0000 --- --- --- --- 008773 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008895 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009039 00000 ------------ G 0.82 0.93 0.87 A 0.18 0.07 0.13 0000 --- --- --- --- 009569 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009733 00000 ------------ T 0.93 0.74 0.84 A 0.07 0.26 0.16 0000 --- --- --- --- 009769 00000 ------------ T 0.89 0.72 0.80 C 0.11 0.28 0.20 0000 --- --- --- --- 010761 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010880 00000 ------------ G 0.94 0.70 0.83 A 0.06 0.30 0.17 0000 --- --- --- --- 011147 00000 ------------ A 0.89 0.70 0.80 G 0.11 0.30 0.20 0000 --- --- --- --- 011198 00000 ------------ G 0.93 0.70 0.82 C 0.07 0.30 0.18 0000 --- --- --- --- 011324 00000 ------------ G 0.93 0.70 0.82 A 0.07 0.30 0.18 0000 --- --- --- --- 011534 00000 ------------ T 0.90 0.73 0.82 C 0.10 0.27 0.18 0000 --- --- --- --- 011537 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 011639 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 011650 00000 ------------ A 0.90 0.73 0.82 T 0.10 0.27 0.18 0000 --- --- --- --- 012305 00000 ------------ - 0.90 0.73 0.82 + 0.10 0.27 0.18 0000 --- --- --- --- 012435 00000 ------------ - 0.09 0.28 0.19 + 0.91 0.72 0.81 0000 --- --- --- --- 012571 00000 ------------ A 0.88 0.72 0.80 C 0.12 0.28 0.20 0000 --- --- --- --- 012576 00000 ------------ A 0.88 0.72 0.80 G 0.12 0.28 0.20 0000 --- --- --- --- 012715 00000 ------------ - 0.91 1.00 0.95 + 0.09 0.00 0.05 0000 --- --- --- --- 013106 00000 ------------ C 0.93 0.74 0.84 T 0.07 0.26 0.16 0000 --- --- --- --- 013607 00000 ------------ C 0.90 0.72 0.81 T 0.10 0.28 0.19 0000 --- --- --- --- 013611 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013647 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 013659 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014147 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014255 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014409 00000 ------------ G 0.96 0.93 0.95 A 0.04 0.07 0.05 0000 --- --- --- --- 014514 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014526 00000 ------------ A 0.90 0.72 0.81 C 0.10 0.28 0.19 0000 --- --- --- --- 014545 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 014634 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 015012 00000 ------------ T 0.90 0.72 0.81 C 0.10 0.28 0.19 0000 --- --- --- --- 015316 00000 ------------ A 0.90 0.72 0.81 G 0.10 0.28 0.19 0000 --- --- --- --- 015319 00000 ------------ A 0.90 0.72 0.81 T 0.10 0.28 0.19 0000 --- --- --- --- 015525 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015534 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015694 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016030 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016185 00000 ------------ G 0.89 0.72 0.80 A 0.11 0.28 0.20 0000 --- --- --- --- 016252 00000 ------------ - 0.59 0.87 0.73 + 0.41 0.13 0.27 0000 --- --- --- --- 016816 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016968 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 017116 00000 ------------ C 0.77 0.72 0.74 T 0.23 0.28 0.26 0000 --- --- --- --- 017191 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017327 00000 ------------ G 0.94 0.93 0.94 A 0.06 0.07 0.06 0000 --- --- --- --- 017336 00000 ------------ A 0.77 0.72 0.74 G 0.23 0.28 0.26 0000 --- --- --- --- 017360 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017793 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017889 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 018027 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018141 00000 ------------ - 0.08 0.28 0.18 + 0.92 0.72 0.82 0000 --- --- --- --- 018262 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018374 00000 ------------ T 0.90 0.96 0.93 C 0.10 0.04 0.07 0000 --- --- --- --- 018459 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018460 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018605 00000 ------------ C 0.88 0.72 0.80 T 0.12 0.28 0.20 0000 --- --- --- --- 018701 00000 ------------ T 0.88 0.72 0.80 A 0.12 0.28 0.20 0000 --- --- --- --- 018723 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 018841 00000 ------------ T 0.92 0.72 0.82 G 0.08 0.28 0.18 0000 --- --- --- --- 019085 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019123 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019260 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 019361 00000 ------------ T 0.92 0.72 0.82 C 0.08 0.28 0.18 0000 --- --- --- --- 019385 00000 ------------ T 0.88 0.72 0.80 C 0.12 0.28 0.20 0000 --- --- --- --- 019516 00000 ------------ T 0.88 0.72 0.80 C 0.12 0.28 0.20 0000 --- --- --- --- 019651 00000 ------------ T 0.88 0.72 0.80 C 0.12 0.28 0.20 0000 --- --- --- --- 019778 00000 ------------ T 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 019838 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019850 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019942 00000 ------------ - 0.08 0.28 0.18 + 0.92 0.72 0.82 0000 --- --- --- --- 020037 00000 ------------ A 0.76 0.72 0.74 G 0.24 0.28 0.26 0000 --- --- --- --- 020445 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020488 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 020754 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020877 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 021132 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021156 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021195 00000 ------------ T 0.75 0.72 0.73 C 0.25 0.28 0.27 0000 --- --- --- --- 021234 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 021235 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021551 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 021833 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 021972 00000 ------------ T 0.88 0.72 0.80 C 0.12 0.28 0.20 0000 --- --- --- --- 021984 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022069 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022142 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022279 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 022306 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022384 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022452 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022654 00000 ------------ C 0.89 0.72 0.80 T 0.11 0.28 0.20 0000 --- --- --- --- 022850 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 022881 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022919 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 023671 00000 ------------ C 0.97 0.95 0.96 T 0.03 0.05 0.04 0000 --- --- --- --- 023866 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023992 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024038 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024198 00000 ------------ C 0.91 0.71 0.82 G 0.09 0.29 0.18 0000 --- --- --- --- 024355 00000 ------------ C 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 024410 00000 ------------ - 0.09 0.28 0.19 + 0.91 0.72 0.81 0000 --- --- --- --- 024594 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024710 00000 ------------ A 0.77 0.72 0.74 G 0.23 0.28 0.26 0000 --- --- --- --- 025026 00000 ------------ A 0.77 0.72 0.74 G 0.23 0.28 0.26 0000 --- --- --- --- 025039 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 025073 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 025098 00000 ------------ T 0.77 0.72 0.74 C 0.23 0.28 0.26 0000 --- --- --- --- 025165 00627 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0190 GAC GAT ASP(D) ASP(D) 025263 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025373 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 025431 00000 ------------ C 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 025468 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025581 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025920 00000 ------------ C 0.93 0.70 0.82 T 0.07 0.30 0.18 0000 --- --- --- --- 026041 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 027763 00000 ------------ G 0.92 0.72 0.82 A 0.08 0.28 0.18 0000 --- --- --- --- 027858 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 027956 00000 ------------ - 0.88 0.72 0.80 + 0.12 0.28 0.20 0000 --- --- --- --- 029049 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 029290 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029391 00000 ------------ C 0.91 0.72 0.83 T 0.09 0.28 0.17 0000 --- --- --- --- 029544 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 029935 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030009 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030147 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 030324 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 030461 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030701 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 030896 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 031185 00000 ------------ G 0.88 0.74 0.81 A 0.12 0.26 0.19 0000 --- --- --- --- 031189 00000 ------------ T 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 031347 00000 ------------ T 0.88 0.74 0.81 C 0.12 0.26 0.19 0000 --- --- --- --- 031404 00000 ------------ A 0.88 0.71 0.80 G 0.12 0.29 0.20 0000 --- --- --- --- 031878 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 032026 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 032155 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 032226 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 032234 00000 ------------ A 0.77 0.72 0.75 G 0.23 0.28 0.25 0000 --- --- --- --- 032337 00000 ------------ G 0.92 0.72 0.83 A 0.08 0.28 0.17 0000 --- --- --- --- 032697 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 032743 00000 ------------ C 0.92 0.72 0.83 T 0.08 0.28 0.17 0000 --- --- --- --- 032874 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 033106 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 033209 00000 ------------ C 0.92 0.87 0.89 T 0.08 0.13 0.11 0000 --- --- --- --- 034895 00000 ------------ - 0.08 0.30 0.18 + 0.92 0.70 0.82 0000 --- --- --- --- 035264 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 035424 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 035699 00981 SYNON G 0.98 1.00 0.99 T 0.02 0.00 0.01 0308 CGG CGT ARG(R) ARG(R) 035821 00000 ------------ A 0.55 0.57 0.56 G 0.45 0.43 0.44 0000 --- --- --- --- 035927 00000 ------------ G 0.98 0.93 0.95 A 0.02 0.07 0.05 0000 --- --- --- --- 035960 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036185 00000 ------------ G 0.98 0.93 0.95 A 0.02 0.07 0.05 0000 --- --- --- --- 036380 01140 SYNON C 0.93 1.00 0.97 T 0.07 0.00 0.03 0361 TTC TTT PHE(F) PHE(F) 036728* 036731 00000 ------------ C 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 036928 00000 ------------ T 0.98 0.93 0.96 A 0.02 0.07 0.04 0000 --- --- --- --- 036963 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 037002 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 037046 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 037087 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 037419 00000 ------------ G 0.98 0.93 0.96 T 0.02 0.07 0.04 0000 --- --- --- --- 037642 00000 ------------ - 0.98 0.98 0.98 + 0.02 0.02 0.02 0000 --- --- --- --- 037649 00000 ------------ T 0.75 0.67 0.71 C 0.25 0.33 0.29 0000 --- --- --- --- 037779 00000 ------------ A 0.54 0.50 0.52 G 0.46 0.50 0.48 0000 --- --- --- --- 037863 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 037882 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 037911 00000 ------------ G 0.54 0.50 0.52 A 0.46 0.50 0.48 0000 --- --- --- --- 038314 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 038342 00000 ------------ C 0.87 0.79 0.83 G 0.13 0.21 0.17 0000 --- --- --- --- 038480 00000 ------------ C 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 038660 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 038941 00000 ------------ - 0.84 0.71 0.78 + 0.16 0.29 0.22 0000 --- --- --- --- 038987 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 039539 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 039626 00000 ------------ - 0.55 0.65 0.60 + 0.45 0.35 0.40 0000 --- --- --- --- 039741 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 039866 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 040001 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 040092 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 040117 00000 ------------ C 0.69 0.86 0.78 T 0.31 0.14 0.22 0000 --- --- --- --- 040122 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040124 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 040149 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 040168 00000 ------------ T 0.90 0.68 0.79 C 0.10 0.32 0.21 0000 --- --- --- --- 040395 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 040420 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 040527 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 040601 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 040754 00000 ------------ C 0.69 0.75 0.72 T 0.31 0.25 0.28 0000 --- --- --- --- 040756 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 040818 00000 ------------ G 0.88 0.78 0.83 A 0.12 0.22 0.17 0000 --- --- --- --- 041133 01573 3' UTR A 0.96 0.93 0.95 G 0.04 0.07 0.05 0000 --- --- --- --- 041191 01631 3' UTR A 0.54 0.57 0.55 G 0.46 0.43 0.45 0000 --- --- --- --- 041627 02067 3' UTR - 0.46 0.39 0.42 + 0.54 0.61 0.58 0000 --- --- --- --- 041705 02145 3' UTR - 0.91 0.72 0.82 + 0.09 0.28 0.18 0000 --- --- --- --- 041824 02264 3' UTR - 0.80 0.87 0.84 + 0.20 0.13 0.16 0000 --- --- --- --- 041841 02281 3' UTR A 0.86 0.72 0.79 G 0.14 0.28 0.21 0000 --- --- --- --- 042004 00000 ------------ C 0.94 0.78 0.86 A 0.06 0.22 0.14 0000 --- --- --- --- 042068 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 042294 00000 ------------ T 0.67 0.59 0.63 C 0.33 0.41 0.37 0000 --- --- --- --- 042349 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 042451 00000 ------------ G 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 042539 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042579 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 042809 00000 ------------ C 0.65 0.59 0.62 G 0.35 0.41 0.38 0000 --- --- --- --- 042959 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 043086 00000 ------------ T 0.65 0.59 0.62 C 0.35 0.41 0.38 0000 --- --- --- --- 043158 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 043324 00000 ------------ T 0.64 0.57 0.61 C 0.36 0.42 0.39 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005122: AG 012305: GAGG 012435: AGAG 012715: C 014545: AG 016252: TGCTGGGCGAGCCGTG 018141: AG 019942: TCATAAAAGCCATAATAGTTGCT 021833: CAAAA 024410: GCATTTCTGCGGTGCACAGAGCTAGTCGCT 027956: G 031878: C 032026: C 032874: AG 034895: GTCCCGTCTTCCCTTC 037642: C 037882: GAGGATGGG 038941: TT 039626: A 040527: C 040601: ATAATT 041627: GG 041705: AG 041824: A 042959: CCCATCCCT 043158: TTG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 001175 A 0.79 0.72 0.76 C 0.04 0.00 0.02 G 0.17 0.28 0.22 036728 A 0.04 0.09 0.06 C 0.04 0.00 0.02 G 0.92 0.91 0.91 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000110 00000 ------------ G 0.67 1.00 0.84 A 0.33 0.00 0.16 0000 --- --- --- --- 000190 00000 ------------ G 1.00 0.89 0.94 C 0.00 0.11 0.06 0000 --- --- --- --- 000201 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 000431 00000 ------------ G 0.93 0.91 0.92 T 0.07 0.09 0.08 0000 --- --- --- --- 000512 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000514 00000 ------------ A 1.00 0.93 0.97 G 0.00 0.07 0.03 0000 --- --- --- --- 000544 00000 ------------ - 0.09 0.00 0.04 + 0.91 1.00 0.96 0000 --- --- --- --- 000584 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000673 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 000765 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 000884 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 000973 00000 ------------ C 0.95 0.91 0.93 T 0.05 0.09 0.07 0000 --- --- --- --- 001047 00000 ------------ G 0.97 1.00 0.99 T 0.03 0.00 0.01 0000 --- --- --- --- 001105 00000 ------------ C 0.92 0.37 0.62 T 0.08 0.63 0.38 0000 --- --- --- --- 001131 00000 ------------ T 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 001832 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 001893 00000 ------------ G 0.80 0.84 0.82 A 0.20 0.16 0.18 0000 --- --- --- --- 001926 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 002288 00000 ------------ A 0.68 1.00 0.84 G 0.33 0.00 0.16 0000 --- --- --- --- 002336 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 002370 00000 ------------ A 0.97 0.90 0.94 C 0.03 0.10 0.06 0000 --- --- --- --- 002405 00000 ------------ A 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 002638 00000 ------------ A 0.97 1.00 0.98 G 0.03 0.00 0.02 0000 --- --- --- --- 003309 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003761 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 004115 00000 ------------ C 0.95 0.84 0.90 G 0.05 0.16 0.10 0000 --- --- --- --- 004214 00000 ------------ C 0.25 0.89 0.55 G 0.75 0.11 0.45 0000 --- --- --- --- 004478 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006837 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007203 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 007341 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007565 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 007872 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 007881 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 008015 00000 ------------ T 0.67 0.89 0.78 C 0.33 0.11 0.22 0000 --- --- --- --- 008319 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008335 00000 ------------ G 0.70 0.98 0.84 T 0.30 0.02 0.16 0000 --- --- --- --- 008772 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 008811 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008941 00000 ------------ - 0.98 0.89 0.93 + 0.02 0.11 0.07 0000 --- --- --- --- 009128 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 009306 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 009362 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009369 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 009371 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 009481 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 009572 00000 ------------ G 0.71 0.89 0.80 A 0.29 0.11 0.20 0000 --- --- --- --- 009577 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009737 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009743 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009886 00000 ------------ G 0.91 1.00 0.95 A 0.09 0.00 0.05 0000 --- --- --- --- 009909 00000 ------------ A 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 009957 00000 ------------ C 0.70 0.90 0.80 A 0.30 0.10 0.20 0000 --- --- --- --- 010109 00000 ------------ C 0.52 0.88 0.69 T 0.48 0.12 0.31 0000 --- --- --- --- 010211 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 010241 00000 ------------ G 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 010244 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010315 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010397 00000 ------------ A 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 010640 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010919 00000 ------------ A 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 011079 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011252 00000 ------------ G 0.79 0.91 0.85 A 0.21 0.09 0.15 0000 --- --- --- --- 012604 00000 ------------ G 0.44 0.87 0.65 A 0.56 0.13 0.35 0000 --- --- --- --- 012635 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 012982 00000 ------------ T 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 013058 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 013125 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 013230 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 013449 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 013695 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014407 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015131 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015240 00000 ------------ G 0.94 0.41 0.68 A 0.06 0.59 0.32 0000 --- --- --- --- 015663 00000 ------------ - 0.89 1.00 0.94 + 0.11 0.00 0.06 0000 --- --- --- --- 016041 00000 ------------ - 0.48 0.13 0.30 + 0.52 0.87 0.70 0000 --- --- --- --- 016423 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 016487 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016543 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016657 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016940 00000 ------------ C 0.79 0.89 0.84 T 0.21 0.11 0.16 0000 --- --- --- --- 017551 00000 ------------ C 0.90 0.41 0.66 A 0.10 0.59 0.34 0000 --- --- --- --- 017625 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 017710 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 017755 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 018171 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 018453 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 018494 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 018582 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018686 00000 ------------ - 0.79 0.89 0.84 + 0.21 0.11 0.16 0000 --- --- --- --- 018721 00000 ------------ - 0.93 1.00 0.97 + 0.07 0.00 0.03 0000 --- --- --- --- 019032 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 019424 00000 ------------ T 0.96 0.89 0.93 C 0.04 0.11 0.07 0000 --- --- --- --- 019540 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 019578 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 019685 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 020036 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020580 00000 ------------ G 0.43 0.87 0.66 A 0.57 0.13 0.34 0000 --- --- --- --- 020784 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 021084 00000 ------------ G 0.96 0.91 0.94 A 0.04 0.09 0.06 0000 --- --- --- --- 021225 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022168 00000 ------------ - 0.08 0.48 0.28 + 0.92 0.52 0.72 0000 --- --- --- --- 022641 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023576 02002 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 023581 02007 3' UTR T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 023691 02117 3' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024224 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024253 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 024324 00000 ------------ C 0.79 0.89 0.84 T 0.21 0.11 0.16 0000 --- --- --- --- 024595 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 024775 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024800 00000 ------------ A 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 024845 00000 ------------ A 0.93 0.89 0.91 G 0.07 0.11 0.09 0000 --- --- --- --- 025095 00000 ------------ T 0.85 1.00 0.93 A 0.15 0.00 0.07 0000 --- --- --- --- 025172 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 025305 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 025514 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 025682 00000 ------------ C 0.95 0.89 0.92 A 0.05 0.11 0.08 0000 --- --- --- --- 025725 00000 ------------ A 0.73 0.89 0.81 G 0.27 0.11 0.19 0000 --- --- --- --- 025731 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 026137 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 026251 00000 ------------ C 0.86 0.41 0.64 T 0.14 0.59 0.36 0000 --- --- --- --- 026458 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000544: G 001832: ATTT 008941: CTGT 009128: ATTTT 009371: TATG 015663: T 016041: T 016423: C 018171: ATTT 018494: TAAT 018686: AT 018721: AG 019685: TG 020784: T 022168: A 026137: CAT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000115 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000217 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000522 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000672 00000 ------------ T 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 001036 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 001181 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 001198 00000 ------------ G 0.87 1.00 0.93 A 0.13 0.00 0.07 0000 --- --- --- --- 001311 00000 ------------ A 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 001317 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001318 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001376 00000 ------------ G 0.77 0.98 0.87 A 0.23 0.02 0.13 0000 --- --- --- --- 001692 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001823 00000 ------------ C 0.91 1.00 0.95 T 0.09 0.00 0.05 0000 --- --- --- --- 001828 00000 ------------ T 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 001985 00062 5' UTR C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002002 00079 5' UTR C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 002016 00093 5' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002053 00130 5' UTR A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 002208 00285 5' UTR T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002295 00372 NON-SYN C 0.88 1.00 0.94 T 0.12 0.00 0.06 0008 GCA GTA ALA(A) VAL(V) 002422 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 002434 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002472 00000 ------------ T 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 002525 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002580 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 002829 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 003047 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003142 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 003175 00000 ------------ T 0.54 0.98 0.76 G 0.46 0.02 0.24 0000 --- --- --- --- 003215 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003454 00000 ------------ C 0.48 0.98 0.72 A 0.52 0.02 0.28 0000 --- --- --- --- 003552 00000 ------------ C 0.88 1.00 0.93 T 0.12 0.00 0.07 0000 --- --- --- --- 003588 00000 ------------ A 0.46 0.98 0.71 G 0.54 0.02 0.29 0000 --- --- --- --- 003617 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003778 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003891 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004034 00000 ------------ C 0.46 0.98 0.71 T 0.54 0.02 0.29 0000 --- --- --- --- 004116 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 004171 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004203 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004210 00000 ------------ G 0.58 0.98 0.78 T 0.42 0.02 0.22 0000 --- --- --- --- 004268 00000 ------------ G 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 004347 00000 ------------ G 0.76 0.98 0.87 C 0.24 0.02 0.13 0000 --- --- --- --- 004387 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004483 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004592 00000 ------------ A 0.41 0.72 0.57 T 0.59 0.28 0.43 0000 --- --- --- --- 004821 00000 ------------ G 0.44 0.72 0.57 T 0.56 0.28 0.43 0000 --- --- --- --- 005111 00000 ------------ G 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 005221 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005249 00000 ------------ C 0.56 0.72 0.64 A 0.44 0.28 0.36 0000 --- --- --- --- 005479 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 005691 00000 ------------ C 0.83 0.74 0.78 T 0.17 0.26 0.22 0000 --- --- --- --- 005752 00000 ------------ - 0.24 0.02 0.13 + 0.76 0.98 0.87 0000 --- --- --- --- 005789 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005866 00000 ------------ A 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 005890 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 006056 00000 ------------ T 0.44 0.72 0.57 G 0.56 0.28 0.43 0000 --- --- --- --- 006173 00703 SYNON G 0.77 0.98 0.87 A 0.23 0.02 0.13 0118 CAG CAA GLN(Q) GLN(Q) 006280 00810 NON-SYN G 0.56 0.72 0.64 A 0.44 0.28 0.36 0154 CGT CAT ARG(R) HIS(H) 006415 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006756 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 006853 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 006856 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006896 00964 SYNON C 0.77 0.98 0.87 T 0.23 0.02 0.13 0205 CTC CTT LEU(L) LEU(L) 006947 01015 SYNON C 0.58 0.98 0.78 T 0.42 0.02 0.22 0222 TAC TAT TYR(Y) TYR(Y) 007159 00000 ------------ A 0.89 1.00 0.94 G 0.11 0.00 0.06 0000 --- --- --- --- 007251 00000 ------------ T 0.87 1.00 0.93 C 0.13 0.00 0.07 0000 --- --- --- --- 007301 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007412 00000 ------------ T 0.39 0.70 0.54 G 0.61 0.30 0.46 0000 --- --- --- --- 007571 01183 SYNON C 0.89 0.98 0.93 T 0.11 0.02 0.07 0278 TAC TAT TYR(Y) TYR(Y) 007580 01192 SYNON A 0.43 0.98 0.70 G 0.57 0.02 0.30 0281 ACA ACG THR(T) THR(T) 007759 00000 ------------ T 0.46 0.98 0.71 G 0.54 0.02 0.29 0000 --- --- --- --- 007795 00000 ------------ - 0.02 0.26 0.14 + 0.98 0.74 0.86 0000 --- --- --- --- 007831 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007965 00000 ------------ - 0.04 0.04 0.04 + 0.96 0.96 0.96 0000 --- --- --- --- 008087 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008496 00000 ------------ C 0.98 0.74 0.86 T 0.02 0.26 0.14 0000 --- --- --- --- 008593 00000 ------------ G 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 008620 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 009005 00000 ------------ T 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 009250 00000 ------------ A 0.58 0.98 0.78 G 0.42 0.02 0.22 0000 --- --- --- --- 009472 00000 ------------ T 0.94 0.98 0.96 C 0.06 0.02 0.04 0000 --- --- --- --- 009487 00000 ------------ G 0.98 0.96 0.97 C 0.02 0.04 0.03 0000 --- --- --- --- 009514 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009612 00000 ------------ A 0.77 1.00 0.88 T 0.23 0.00 0.12 0000 --- --- --- --- 009617 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009633 00000 ------------ G 0.46 1.00 0.72 C 0.54 0.00 0.28 0000 --- --- --- --- 009703 00000 ------------ T 0.46 0.98 0.71 G 0.54 0.02 0.29 0000 --- --- --- --- 009868 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 010115 01381 SYNON C 0.60 0.98 0.79 T 0.40 0.02 0.21 0344 ACC ACT THR(T) THR(T) 010265 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 010505 00000 ------------ G 0.58 0.98 0.77 T 0.42 0.02 0.23 0000 --- --- --- --- 010541 00000 ------------ - 0.23 0.02 0.13 + 0.77 0.98 0.87 0000 --- --- --- --- 010703 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010727 00000 ------------ T 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 010898 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 010965 00000 ------------ G 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 011491 00000 ------------ T 0.47 0.98 0.75 C 0.53 0.02 0.25 0000 --- --- --- --- 011628 00000 ------------ G 0.83 0.98 0.90 C 0.17 0.02 0.10 0000 --- --- --- --- 012102 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012162 00000 ------------ T 0.42 0.98 0.69 C 0.58 0.02 0.31 0000 --- --- --- --- 012190 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012353 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 012388 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 012586 00000 ------------ T 0.43 0.98 0.72 A 0.57 0.02 0.28 0000 --- --- --- --- 012610 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 012872 00000 ------------ A 0.48 0.98 0.73 G 0.52 0.02 0.27 0000 --- --- --- --- 012954 00000 ------------ T 0.48 0.98 0.73 C 0.52 0.02 0.27 0000 --- --- --- --- 012955 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013045 00000 ------------ C 0.58 0.98 0.78 T 0.42 0.02 0.22 0000 --- --- --- --- 013200 00000 ------------ C 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 013217 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 013757 00000 ------------ T 0.46 0.98 0.71 C 0.54 0.02 0.29 0000 --- --- --- --- 013899 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 014088 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 014295 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014525 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 014673 00000 ------------ - 0.14 0.00 0.07 + 0.86 1.00 0.93 0000 --- --- --- --- 014739 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 014884 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015093 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 015148 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 015191 00000 ------------ A 0.59 1.00 0.79 G 0.41 0.00 0.21 0000 --- --- --- --- 015471 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015528 00000 ------------ T 0.57 0.98 0.78 C 0.43 0.02 0.22 0000 --- --- --- --- 015615 00000 ------------ C 0.57 0.98 0.77 A 0.43 0.02 0.23 0000 --- --- --- --- 015638 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 015742 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 015854 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 016085 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016089 00000 ------------ T 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 016281 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016668 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 016684 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 016925 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 016934 00000 ------------ T 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 016951 00000 ------------ - 0.15 0.00 0.07 + 0.85 1.00 0.93 0000 --- --- --- --- 017179 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017424 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017713 00000 ------------ C 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 017914 00000 ------------ A 0.88 1.00 0.94 C 0.12 0.00 0.06 0000 --- --- --- --- 018094 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018202 00000 ------------ A 0.89 1.00 0.95 G 0.11 0.00 0.05 0000 --- --- --- --- 018489 00000 ------------ C 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 019123 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 019168 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 019171 00000 ------------ - 0.11 0.02 0.07 + 0.89 0.98 0.93 0000 --- --- --- --- 019573 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 020034 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 020056 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 020370 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 020473 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020531 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020540 00000 ------------ T 0.46 0.98 0.71 C 0.54 0.02 0.29 0000 --- --- --- --- 020588 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020804 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 021432 00000 ------------ A 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 021612 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 021861 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 021862 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 021972 00000 ------------ - 0.03 0.00 0.01 + 0.97 1.00 0.99 0000 --- --- --- --- 022294 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022342 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 023079 02035 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0562 TTC TTT PHE(F) PHE(F) 023080 02036 NON-SYN G 0.83 1.00 0.91 A 0.17 0.00 0.09 0563 GCC ACC ALA(A) THR(T) 023675 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 024131 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024388 00000 ------------ C 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 024524 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024913 00000 ------------ C 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 025203 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 025528 00000 ------------ T 0.58 0.98 0.78 C 0.42 0.02 0.22 0000 --- --- --- --- 025568 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026257 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 026818 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027095 02485 NON-SYN G 0.98 1.00 0.99 C 0.02 0.00 0.01 0712 TTG TTC LEU(L) PHE(F) 027349 02739 3' UTR G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 027493 02883 3' UTR A 0.41 0.98 0.70 T 0.59 0.02 0.30 0000 --- --- --- --- 027608 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 027912 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028107 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028123 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028128 00000 ------------ G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 028245 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028350 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 028434 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 028438 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028510 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 028643 00000 ------------ A 0.62 0.98 0.80 C 0.38 0.02 0.20 0000 --- --- --- --- 028695 00000 ------------ T 1.00 0.96 0.98 G 0.00 0.04 0.02 0000 --- --- --- --- 028866 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 028885 00000 ------------ C 0.62 0.98 0.80 T 0.38 0.02 0.20 0000 --- --- --- --- 029304 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 029609 00000 ------------ T 0.77 0.98 0.87 C 0.23 0.02 0.13 0000 --- --- --- --- 029677 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 029788 00000 ------------ A 0.69 0.98 0.83 G 0.31 0.02 0.17 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 005752: C 007795: A 007965: C 008620: A 010541: A 014525: C 014673: G 016951: TCCT 019171: A 021972: C Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000423 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000434 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 001028 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 001426 00000 ------------ T 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 001551 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 002281 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002285 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 002383 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 002568 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002603 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 002648 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 002785 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 002994 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003060 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003443 00000 ------------ - 0.61 0.02 0.32 + 0.39 0.98 0.68 0000 --- --- --- --- 003479 00000 ------------ G 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 003694 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003765 00000 ------------ C 0.50 0.98 0.73 G 0.50 0.02 0.27 0000 --- --- --- --- 004185 00000 ------------ G 0.85 0.98 0.91 A 0.15 0.02 0.09 0000 --- --- --- --- 004263 00000 ------------ G 1.00 0.93 0.97 A 0.00 0.07 0.03 0000 --- --- --- --- 005622 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 005651 00000 ------------ G 0.79 1.00 0.89 A 0.21 0.00 0.11 0000 --- --- --- --- 005688 00000 ------------ C 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 005690 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005846 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005869 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 006117 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007301 00000 ------------ G 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 007413 00000 ------------ G 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 007528 00000 ------------ - 0.79 1.00 0.89 + 0.21 0.00 0.11 0000 --- --- --- --- 007539 00000 ------------ - 0.21 0.00 0.11 + 0.79 1.00 0.89 0000 --- --- --- --- 007669 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 007888 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 007889 00000 ------------ A 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 007890 00000 ------------ A 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 007891 00000 ------------ A 0.78 1.00 0.89 G 0.22 0.00 0.11 0000 --- --- --- --- 008102 00000 ------------ C 0.78 1.00 0.89 T 0.22 0.00 0.11 0000 --- --- --- --- 008104 00000 ------------ T 0.39 0.98 0.69 C 0.61 0.02 0.31 0000 --- --- --- --- 008397 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 008482 00000 ------------ G 0.74 0.98 0.86 A 0.26 0.02 0.14 0000 --- --- --- --- 008575 00000 ------------ A 0.79 1.00 0.91 C 0.21 0.00 0.09 0000 --- --- --- --- 008600 00000 ------------ C 0.64 0.98 0.81 T 0.36 0.02 0.19 0000 --- --- --- --- 008652 00000 ------------ T 0.40 0.98 0.67 C 0.60 0.02 0.33 0000 --- --- --- --- 008653 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 008718 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009005 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 009159 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 009238 00000 ------------ G 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 009413 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 009451 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 009505 00000 ------------ A 0.88 1.00 0.95 C 0.12 0.00 0.05 0000 --- --- --- --- 009606 00000 ------------ - 0.25 0.00 0.10 + 0.75 1.00 0.90 0000 --- --- --- --- 009918 00000 ------------ A 0.41 0.97 0.67 G 0.59 0.03 0.33 0000 --- --- --- --- 010702 00000 ------------ C 0.79 1.00 0.89 T 0.21 0.00 0.11 0000 --- --- --- --- 010942 00000 ------------ A 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 011030 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 011084 00000 ------------ T 0.70 1.00 0.85 G 0.30 0.00 0.15 0000 --- --- --- --- 011427 00000 ------------ G 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 011429 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 011594 00148 5' UTR G 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011650 00204 5' UTR G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011779 00333 SYNON G 0.95 1.00 0.98 T 0.05 0.00 0.02 0039 CTG CTT LEU(L) LEU(L) 011982 00000 ------------ T 0.48 0.98 0.73 C 0.52 0.02 0.27 0000 --- --- --- --- 012199 00000 ------------ A 0.48 0.98 0.72 G 0.52 0.02 0.28 0000 --- --- --- --- 012434 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 012482 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 012547 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 013033 00000 ------------ - 0.11 0.00 0.06 + 0.89 1.00 0.94 0000 --- --- --- --- 013166 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 013198 00000 ------------ C 0.52 0.98 0.76 A 0.48 0.02 0.24 0000 --- --- --- --- 013256 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 013297 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 013636 00000 ------------ C 0.48 0.98 0.72 T 0.52 0.02 0.28 0000 --- --- --- --- 013682 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 014152 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 014192 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014429 00000 ------------ C 0.60 0.98 0.78 T 0.40 0.02 0.22 0000 --- --- --- --- 014456 00000 ------------ A 0.90 1.00 0.94 G 0.10 0.00 0.06 0000 --- --- --- --- 014851 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 014868 00000 ------------ A 0.48 0.98 0.72 G 0.52 0.02 0.28 0000 --- --- --- --- 014936 00000 ------------ T 0.48 0.98 0.72 C 0.52 0.02 0.28 0000 --- --- --- --- 014995 00000 ------------ A 0.48 0.98 0.72 G 0.52 0.02 0.28 0000 --- --- --- --- 015024 00000 ------------ T 0.48 0.98 0.72 C 0.52 0.02 0.28 0000 --- --- --- --- 015208 00000 ------------ G 0.48 0.98 0.72 A 0.52 0.02 0.28 0000 --- --- --- --- 015211 00000 ------------ T 0.54 0.98 0.76 C 0.46 0.02 0.24 0000 --- --- --- --- 015363 00000 ------------ C 0.48 0.98 0.73 T 0.52 0.02 0.27 0000 --- --- --- --- 015655 00000 ------------ G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 015749 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 015752 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015885 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 016187 00000 ------------ C 0.44 0.98 0.70 G 0.56 0.02 0.30 0000 --- --- --- --- 016246 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 016926 00000 ------------ T 0.57 0.98 0.77 C 0.43 0.02 0.23 0000 --- --- --- --- 017164 00000 ------------ C 0.46 0.98 0.72 T 0.54 0.02 0.28 0000 --- --- --- --- 017340 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 017417 00000 ------------ C 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 017540 00000 ------------ G 0.52 0.97 0.74 C 0.48 0.03 0.26 0000 --- --- --- --- 017551 00000 ------------ G 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 017598 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 017677 00000 ------------ T 0.52 0.97 0.74 C 0.48 0.03 0.26 0000 --- --- --- --- 017786 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017963 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 017968 00000 ------------ G 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 018111 00000 ------------ T 0.50 0.98 0.73 C 0.50 0.02 0.27 0000 --- --- --- --- 018161 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 018438 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 018449 00000 ------------ A 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 018468 00000 ------------ - 0.56 0.98 0.77 + 0.44 0.02 0.23 0000 --- --- --- --- 018517 00000 ------------ G 0.57 0.98 0.77 A 0.43 0.02 0.23 0000 --- --- --- --- 018627 00000 ------------ G 0.52 0.98 0.76 A 0.48 0.02 0.24 0000 --- --- --- --- 018910 00000 ------------ C 0.44 0.98 0.70 G 0.56 0.02 0.30 0000 --- --- --- --- 018917 00000 ------------ T 0.44 0.98 0.70 G 0.56 0.02 0.30 0000 --- --- --- --- 019330 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019360 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019549 00000 ------------ G 0.83 0.98 0.90 A 0.17 0.02 0.10 0000 --- --- --- --- 019563 00000 ------------ G 0.54 0.98 0.76 A 0.46 0.02 0.24 0000 --- --- --- --- 019693 00000 ------------ T 0.44 0.98 0.70 A 0.56 0.02 0.30 0000 --- --- --- --- 019782 00000 ------------ A 0.54 0.98 0.76 G 0.46 0.02 0.24 0000 --- --- --- --- 019865 00000 ------------ G 0.54 0.97 0.74 A 0.46 0.03 0.26 0000 --- --- --- --- 020019 00685 NON-SYN T 0.52 0.98 0.74 C 0.48 0.02 0.26 0157 TGC CGC CYS(C) ARG(R) 020127 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 020972 00000 ------------ A 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 021007 00000 ------------ C 0.59 0.98 0.78 T 0.41 0.02 0.22 0000 --- --- --- --- 021061 00000 ------------ T 0.54 0.98 0.76 C 0.46 0.02 0.24 0000 --- --- --- --- 021226 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 021561 01188 SYNON C 0.95 1.00 0.98 T 0.05 0.00 0.02 0324 TAC TAT TYR(Y) TYR(Y) 021600 01227 SYNON G 0.97 1.00 0.99 A 0.03 0.00 0.01 0337 CTG CTA LEU(L) LEU(L) 021669 01296 SYNON G 0.48 0.98 0.73 A 0.52 0.02 0.27 0360 ACG ACA THR(T) THR(T) 021832 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022024 01348 NON-SYN A 0.52 0.98 0.75 G 0.48 0.02 0.25 0378 ATG GTG MET(M) VAL(V) 022283 00000 ------------ T 0.59 0.98 0.78 C 0.41 0.02 0.22 0000 --- --- --- --- 022469 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 022628 01608 SYNON C 1.00 0.80 0.90 T 0.00 0.20 0.10 0464 AAC AAT ASN(N) ASN(N) 023150 00000 ------------ G 0.57 0.98 0.77 A 0.43 0.02 0.23 0000 --- --- --- --- 023309 00000 ------------ C 0.57 0.98 0.77 G 0.43 0.02 0.23 0000 --- --- --- --- 023587 01860 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0548 AAC AAT ASN(N) ASN(N) 023805 00000 ------------ A 0.57 0.98 0.78 G 0.43 0.02 0.22 0000 --- --- --- --- 023925 00000 ------------ - 0.43 0.02 0.22 + 0.57 0.98 0.78 0000 --- --- --- --- 024253 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 024433 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024437 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 024712 02016 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0600 ACC ACT THR(T) THR(T) 024715 02019 SYNON G 0.98 1.00 0.99 A 0.02 0.00 0.01 0601 ACG ACA THR(T) THR(T) 024790 02094 SYNON A 0.50 0.98 0.72 G 0.50 0.02 0.28 0626 GGA GGG GLY(G) GLY(G) 024961 00000 ------------ G 0.90 1.00 0.94 A 0.10 0.00 0.06 0000 --- --- --- --- 025008 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 025336 02258 NON-SYN T 0.50 0.98 0.73 C 0.50 0.02 0.27 0681 ATG ACG MET(M) THR(T) 025376 02298 SYNON T 0.96 1.00 0.98 C 0.04 0.00 0.02 0694 AAT AAC ASN(N) ASN(N) 025401 02323 SYNON C 0.94 1.00 0.97 T 0.06 0.00 0.03 0703 CTG TTG LEU(L) LEU(L) 025569 02491 3' UTR - 0.10 0.00 0.05 + 0.90 1.00 0.95 0000 --- --- --- --- 025998 00000 ------------ A 0.65 0.98 0.82 G 0.35 0.02 0.18 0000 --- --- --- --- 026054 00000 ------------ T 0.52 0.98 0.76 C 0.48 0.02 0.24 0000 --- --- --- --- 026085 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 026161 00000 ------------ - 0.47 0.02 0.23 + 0.53 0.98 0.77 0000 --- --- --- --- 026414 00000 ------------ C 0.89 1.00 0.95 T 0.11 0.00 0.05 0000 --- --- --- --- 026990 00000 ------------ T 0.44 0.98 0.70 C 0.56 0.02 0.30 0000 --- --- --- --- 027706 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 028016 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 002285: A 003443: C 007528: CA 007539: T 009451: TCT 009606: AATAC 013033: GTT 018468: TGAATGAA 023925: A 025569: G 026161: G 028016: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000081 00000 ------------ - 0.81 0.52 0.67 + 0.19 0.48 0.33 0000 --- --- --- --- 000449 00000 ------------ - 0.92 1.00 0.96 + 0.08 0.00 0.04 0000 --- --- --- --- 000540 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000586 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000650 00000 ------------ T 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 000658 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 000695 00000 ------------ C 0.88 0.75 0.82 T 0.12 0.25 0.18 0000 --- --- --- --- 000922 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 001319 00000 ------------ C 0.93 0.76 0.85 T 0.07 0.24 0.15 0000 --- --- --- --- 001456 00000 ------------ G 0.89 0.74 0.81 A 0.11 0.26 0.19 0000 --- --- --- --- 001532 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001711 00000 ------------ - 0.06 0.02 0.04 + 0.94 0.98 0.96 0000 --- --- --- --- 001795 00000 ------------ G 0.95 0.86 0.90 A 0.05 0.14 0.10 0000 --- --- --- --- 001821 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 001830 00000 ------------ - 0.07 0.00 0.04 + 0.93 1.00 0.96 0000 --- --- --- --- 001913 00000 ------------ - 0.04 0.23 0.13 + 0.96 0.77 0.87 0000 --- --- --- --- 002381 00000 ------------ G 0.93 0.91 0.92 A 0.07 0.09 0.08 0000 --- --- --- --- 002767 00000 ------------ A 0.85 1.00 0.92 G 0.15 0.00 0.08 0000 --- --- --- --- 002800 00000 ------------ - 0.73 0.86 0.79 + 0.27 0.14 0.21 0000 --- --- --- --- 002927 00000 ------------ C 0.83 0.91 0.87 G 0.17 0.09 0.13 0000 --- --- --- --- 003004 00000 ------------ G 0.94 0.98 0.96 T 0.06 0.02 0.04 0000 --- --- --- --- 003061 00000 ------------ G 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 003062 00000 ------------ A 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 003114 00000 ------------ A 0.73 0.86 0.79 C 0.27 0.14 0.21 0000 --- --- --- --- 003418 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 003781 00000 ------------ T 0.88 0.83 0.85 G 0.12 0.17 0.15 0000 --- --- --- --- 003988 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004191 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 004393 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 004414 00000 ------------ G 0.93 1.00 0.97 C 0.07 0.00 0.03 0000 --- --- --- --- 004437 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 004565 00000 ------------ - 0.54 0.50 0.52 + 0.46 0.50 0.48 0000 --- --- --- --- 004658 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004861 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 004941 00000 ------------ T 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 004983 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 005024 00000 ------------ A 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 005573 00000 ------------ - 0.17 0.11 0.14 + 0.83 0.89 0.86 0000 --- --- --- --- 006204 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 006294 00000 ------------ - 0.83 0.89 0.86 + 0.17 0.11 0.14 0000 --- --- --- --- 006297 00000 ------------ C 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 006362 00000 ------------ G 0.92 0.98 0.95 A 0.08 0.02 0.05 0000 --- --- --- --- 006443 00000 ------------ - 0.06 0.00 0.03 + 0.94 1.00 0.97 0000 --- --- --- --- 006542 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 006666 00000 ------------ G 0.62 0.50 0.56 A 0.38 0.50 0.44 0000 --- --- --- --- 006805 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006895 00000 ------------ C 0.70 0.75 0.73 T 0.30 0.25 0.27 0000 --- --- --- --- 007074 00000 ------------ - 0.07 0.27 0.18 + 0.93 0.73 0.82 0000 --- --- --- --- 007139 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 007179 00000 ------------ - 0.17 0.11 0.14 + 0.83 0.89 0.86 0000 --- --- --- --- 007180 00000 ------------ T 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 007270 00000 ------------ A 0.98 0.91 0.95 G 0.02 0.09 0.05 0000 --- --- --- --- 007314 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 007445 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 007531 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 007619 00000 ------------ G 0.96 0.78 0.87 A 0.04 0.22 0.13 0000 --- --- --- --- 007793 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 008087 00000 ------------ - 0.81 0.83 0.82 + 0.19 0.17 0.18 0000 --- --- --- --- 008191 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 008215 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 008530 00000 ------------ A 0.74 0.74 0.74 G 0.26 0.26 0.26 0000 --- --- --- --- 008588 00000 ------------ A 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 008782 00000 ------------ A 0.98 0.98 0.98 G 0.02 0.02 0.02 0000 --- --- --- --- 009114 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009386 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 009407 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 009652 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 009962 00000 ------------ G 0.79 0.67 0.73 C 0.21 0.33 0.27 0000 --- --- --- --- 010012 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 010063 00000 ------------ T 0.88 0.80 0.84 C 0.12 0.20 0.16 0000 --- --- --- --- 010587 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 010623 00000 ------------ C 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 010740 00000 ------------ T 0.91 0.91 0.91 G 0.09 0.09 0.09 0000 --- --- --- --- 011170 00000 ------------ A 0.69 0.52 0.61 C 0.31 0.48 0.39 0000 --- --- --- --- 011237 00000 ------------ T 0.94 0.75 0.85 C 0.06 0.25 0.15 0000 --- --- --- --- 011275 00000 ------------ - 0.12 0.20 0.16 + 0.88 0.80 0.84 0000 --- --- --- --- 011336 00000 ------------ A 0.92 0.91 0.91 T 0.08 0.09 0.09 0000 --- --- --- --- 011403 00000 ------------ - 0.31 0.48 0.39 + 0.69 0.52 0.61 0000 --- --- --- --- 011652 00000 ------------ C 0.96 0.78 0.87 G 0.04 0.22 0.13 0000 --- --- --- --- 011667 00000 ------------ C 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 011759 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 011966 00000 ------------ G 0.83 0.91 0.87 T 0.17 0.09 0.13 0000 --- --- --- --- 012140 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012563 00000 ------------ T 0.81 0.80 0.81 C 0.19 0.20 0.19 0000 --- --- --- --- 012751 00000 ------------ T 0.85 1.00 0.92 C 0.15 0.00 0.08 0000 --- --- --- --- 013183 00000 ------------ G 0.83 0.89 0.86 C 0.17 0.11 0.14 0000 --- --- --- --- 013380 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 013418 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 013958 00000 ------------ T 0.83 0.89 0.86 C 0.17 0.11 0.14 0000 --- --- --- --- 013969 00000 ------------ G 0.81 0.83 0.82 A 0.19 0.17 0.18 0000 --- --- --- --- 014012 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 014091 00000 ------------ G 0.92 0.91 0.91 A 0.08 0.09 0.09 0000 --- --- --- --- 014100 00000 ------------ G 0.83 0.89 0.86 A 0.17 0.11 0.14 0000 --- --- --- --- 014303 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014346 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 014691 00000 ------------ A 0.79 0.67 0.73 G 0.21 0.33 0.27 0000 --- --- --- --- 014761 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014868 00000 ------------ C 0.85 1.00 0.93 T 0.15 0.00 0.07 0000 --- --- --- --- 015013 00000 ------------ G 0.89 1.00 0.94 A 0.11 0.00 0.06 0000 --- --- --- --- 015385 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015568 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 015569 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015588 00000 ------------ C 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 015678 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 015758 00667 SYNON T 0.96 0.78 0.87 C 0.04 0.22 0.13 0214 AAT AAC ASN(N) ASN(N) 015861 00770 NON-SYN C 0.83 0.89 0.86 G 0.17 0.11 0.14 0249 CAA GAA GLN(Q) GLU(E) 015919 00828 NON-SYN G 0.92 1.00 0.96 A 0.08 0.00 0.04 0268 CGA CAA ARG(R) GLN(Q) 016051 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016168 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016183 00000 ------------ - 0.73 0.75 0.74 + 0.27 0.25 0.26 0000 --- --- --- --- 016237 00000 ------------ - 0.17 0.11 0.14 + 0.83 0.89 0.86 0000 --- --- --- --- 016249 00000 ------------ - 0.94 1.00 0.97 + 0.06 0.00 0.03 0000 --- --- --- --- 016258 00000 ------------ G 0.83 0.89 0.86 C 0.17 0.11 0.14 0000 --- --- --- --- 016294 00000 ------------ A 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 016349 00000 ------------ G 0.94 0.98 0.96 A 0.06 0.02 0.04 0000 --- --- --- --- 016458 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016460 00000 ------------ G 0.83 0.89 0.86 T 0.17 0.11 0.14 0000 --- --- --- --- 016890 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 016925 00000 ------------ - 0.91 0.73 0.82 + 0.09 0.27 0.18 0000 --- --- --- --- 016936 00000 ------------ G 0.84 1.00 0.91 A 0.16 0.00 0.09 0000 --- --- --- --- 017118 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 017135 00000 ------------ G 0.98 0.80 0.89 A 0.02 0.20 0.11 0000 --- --- --- --- 017139 00000 ------------ C 0.98 0.93 0.96 G 0.02 0.07 0.04 0000 --- --- --- --- 017254 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017269 00000 ------------ - 0.02 0.09 0.06 + 0.98 0.91 0.94 0000 --- --- --- --- 017539 00000 ------------ G 0.85 0.93 0.88 A 0.15 0.07 0.12 0000 --- --- --- --- 017823 00000 ------------ G 0.55 0.52 0.53 C 0.45 0.48 0.47 0000 --- --- --- --- 018159 01146 3' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018382 01369 3' UTR T 0.69 0.87 0.78 C 0.31 0.13 0.22 0000 --- --- --- --- 018412 01399 3' UTR C 0.92 0.76 0.84 A 0.08 0.24 0.16 0000 --- --- --- --- 018427 01414 3' UTR T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 018472 01459 3' UTR A 0.71 0.76 0.73 G 0.29 0.24 0.27 0000 --- --- --- --- 018517 01504 3' UTR G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 018906 01893 3' UTR A 0.71 0.98 0.84 G 0.29 0.02 0.16 0000 --- --- --- --- 019425 00000 ------------ T 0.83 0.70 0.77 G 0.17 0.30 0.23 0000 --- --- --- --- 019720 00000 ------------ G 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 020425 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020689 00000 ------------ A 0.92 0.76 0.84 G 0.08 0.24 0.16 0000 --- --- --- --- 020738 00000 ------------ T 0.83 0.74 0.79 C 0.17 0.26 0.21 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000081: A 000449: T 000658: CAA 001711: GGA 001830: TTGTGACGAAGCGCGCATGCGCGCTTCGCACCC 001913: GG 002800: T 004393: T 004565: A 005573: G 006294: TCT 006443: TT 007074: TTTC 007179: T 008087: TGAC 009407: TCTA 011275: TTAATA 011403: TAT 016183: TA 016237: GT 016249: T 016925: G 017269: GCACT Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000152 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000188 00000 ------------ A 0.69 0.93 0.80 G 0.31 0.07 0.20 0000 --- --- --- --- 000268 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000313 00000 ------------ G 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 000459 00000 ------------ T 0.69 0.93 0.80 A 0.31 0.07 0.20 0000 --- --- --- --- 000548 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 000552 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 000739 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 000807 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 000841 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 001074 00000 ------------ C 0.98 0.89 0.94 G 0.02 0.11 0.06 0000 --- --- --- --- 001271 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 001305 00000 ------------ C 0.69 0.91 0.79 A 0.31 0.09 0.21 0000 --- --- --- --- 001398 00000 ------------ C 0.85 0.96 0.90 G 0.15 0.04 0.10 0000 --- --- --- --- 001420 00000 ------------ A 0.85 0.96 0.90 C 0.15 0.04 0.10 0000 --- --- --- --- 001428 00000 ------------ A 0.94 0.78 0.86 C 0.06 0.22 0.14 0000 --- --- --- --- 001441 00000 ------------ T 0.71 0.91 0.81 A 0.29 0.09 0.19 0000 --- --- --- --- 001458 00000 ------------ G 0.71 0.91 0.81 A 0.29 0.09 0.19 0000 --- --- --- --- 001775 00000 ------------ G 1.00 0.91 0.95 C 0.00 0.09 0.05 0000 --- --- --- --- 001892 00000 ------------ C 0.85 0.96 0.90 T 0.15 0.04 0.10 0000 --- --- --- --- 001923 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002137 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 002359 00191 5' UTR T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002378 00210 5' UTR T 0.74 0.90 0.81 C 0.26 0.10 0.19 0000 --- --- --- --- 003300 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 003589 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 003609 00000 ------------ G 0.85 0.89 0.87 A 0.15 0.11 0.13 0000 --- --- --- --- 003708 00352 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0004 CGC CAC ARG(R) HIS(H) 003947 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 003961 00000 ------------ G 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 004007 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004186 00000 ------------ - 0.15 0.10 0.12 + 0.85 0.90 0.88 0000 --- --- --- --- 005208 00000 ------------ G 1.00 0.94 0.97 A 0.00 0.06 0.03 0000 --- --- --- --- 007538 00000 ------------ G 0.93 0.81 0.87 A 0.07 0.19 0.13 0000 --- --- --- --- 007724 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 007860 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 008244 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008424 00000 ------------ C 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 008526 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 008635 00000 ------------ G 0.87 0.89 0.88 A 0.13 0.11 0.12 0000 --- --- --- --- 008671 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008696 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008697 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009137 00000 ------------ G 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 009896 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 009921 00000 ------------ G 0.94 0.91 0.93 A 0.06 0.09 0.07 0000 --- --- --- --- 010429 00000 ------------ T 0.91 0.90 0.91 C 0.09 0.10 0.09 0000 --- --- --- --- 010572 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010857 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010858 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010859 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010957 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 011248 00000 ------------ C 0.50 0.50 0.50 T 0.50 0.50 0.50 0000 --- --- --- --- 011269 00000 ------------ C 0.50 0.50 0.50 T 0.50 0.50 0.50 0000 --- --- --- --- 011282 00000 ------------ T 0.83 1.00 0.91 C 0.17 0.00 0.09 0000 --- --- --- --- 011300 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 011338 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012008 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012241 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012247 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012264 00000 ------------ T 0.88 0.89 0.88 C 0.12 0.11 0.12 0000 --- --- --- --- 012278 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012966 00000 ------------ C 0.94 0.89 0.91 A 0.06 0.11 0.09 0000 --- --- --- --- 013135 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 013554 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 013835 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 014097 00000 ------------ G 0.98 0.89 0.93 T 0.02 0.11 0.07 0000 --- --- --- --- 014408 00000 ------------ T 0.77 0.88 0.83 C 0.23 0.12 0.17 0000 --- --- --- --- 014417 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014458 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014465 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 014544 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014624 00000 ------------ G 0.90 0.95 0.93 A 0.10 0.05 0.07 0000 --- --- --- --- 014636 00000 ------------ A 0.97 0.89 0.93 G 0.03 0.11 0.07 0000 --- --- --- --- 014959 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 015167 00000 ------------ C 0.95 0.89 0.92 G 0.05 0.11 0.08 0000 --- --- --- --- 015283 00000 ------------ C 1.00 0.97 0.99 A 0.00 0.03 0.01 0000 --- --- --- --- 015482 00000 ------------ G 1.00 0.89 0.95 T 0.00 0.11 0.05 0000 --- --- --- --- 015574 00857 SYNON C 0.88 0.89 0.88 T 0.12 0.11 0.12 0172 ACC ACT THR(T) THR(T) 015648 00931 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0197 CGC CAC ARG(R) HIS(H) 015875 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 015981 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015994 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016518 01283 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 0314 CAC CAT HIS(H) HIS(H) 016608 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016675 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016809 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 016852 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017020 00000 ------------ C 0.94 0.78 0.86 T 0.06 0.22 0.14 0000 --- --- --- --- 017128 01425 NON-SYN G 0.90 0.70 0.80 T 0.10 0.30 0.20 0362 GTC TTC VAL(V) PHE(F) 017131 01428 NON-SYN G 1.00 0.96 0.98 A 0.00 0.04 0.02 0363 GGC AGC GLY(G) SER(S) 017659 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017675 00000 ------------ C 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 017968 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 018080 00000 ------------ G 0.90 0.96 0.93 A 0.10 0.04 0.07 0000 --- --- --- --- 018917 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018919 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019116 00000 ------------ - 0.12 0.05 0.09 + 0.88 0.95 0.91 0000 --- --- --- --- 019210 00000 ------------ C 0.56 0.50 0.53 A 0.44 0.50 0.47 0000 --- --- --- --- 019595 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019642 00000 ------------ T 0.70 0.80 0.74 C 0.30 0.20 0.26 0000 --- --- --- --- 019847 00000 ------------ C 0.54 0.52 0.53 T 0.46 0.48 0.47 0000 --- --- --- --- 020145 00000 ------------ G 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 020223 02189 SYNON T 0.92 1.00 0.96 G 0.08 0.00 0.04 0616 CCT CCG PRO(P) PRO(P) 020328 02294 SYNON C 1.00 0.97 0.99 T 0.00 0.03 0.01 0651 ATC ATT ILE(I) ILE(I) 020491 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 020700 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 020803 00000 ------------ C 0.89 0.83 0.86 T 0.11 0.17 0.14 0000 --- --- --- --- 020984 00000 ------------ C 0.91 0.95 0.93 T 0.09 0.05 0.07 0000 --- --- --- --- 021242 00000 ------------ A 0.88 0.95 0.91 G 0.12 0.05 0.09 0000 --- --- --- --- 021683 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 021693 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021795 00000 ------------ T 0.92 0.96 0.94 C 0.08 0.04 0.06 0000 --- --- --- --- 022009 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 022127 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022198 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 022207 00000 ------------ A 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 022212 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022216 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 022236 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 022451 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022453 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 022487 00000 ------------ T 0.81 0.96 0.89 C 0.19 0.04 0.11 0000 --- --- --- --- 022805 02392 NON-SYN T 1.00 0.91 0.96 G 0.00 0.09 0.04 0684 ATC AGC ILE(I) SER(S) 023081 00000 ------------ T 0.90 0.96 0.93 C 0.10 0.04 0.07 0000 --- --- --- --- 023284 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 023571 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 023601 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 023670 00000 ------------ A 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 023948 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 024112 00000 ------------ G 0.92 0.84 0.88 C 0.08 0.16 0.12 0000 --- --- --- --- 024117 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 024590 00000 ------------ C 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 024683 00000 ------------ A 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 024855 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 024950 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 024993 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 025036 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 025116 00000 ------------ G 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 025215 00000 ------------ G 0.88 0.85 0.86 A 0.12 0.15 0.14 0000 --- --- --- --- 025337 00000 ------------ - 0.08 0.00 0.04 + 0.92 1.00 0.96 0000 --- --- --- --- 025742 00000 ------------ C 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 025747 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 025793 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 025965 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026009 00000 ------------ C 0.89 0.93 0.91 G 0.11 0.07 0.09 0000 --- --- --- --- 026435 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 026548 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 026588 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026635 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 026657 00000 ------------ G 0.90 0.70 0.80 A 0.10 0.30 0.20 0000 --- --- --- --- 026742 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026948 00000 ------------ C 0.90 0.93 0.91 T 0.10 0.07 0.09 0000 --- --- --- --- 027115 00000 ------------ - 0.10 0.05 0.08 + 0.90 0.95 0.92 0000 --- --- --- --- 027742 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 027860 00000 ------------ T 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 028093 00000 ------------ C 0.60 0.52 0.56 T 0.40 0.48 0.44 0000 --- --- --- --- 028106 00000 ------------ T 0.81 0.93 0.87 C 0.19 0.07 0.13 0000 --- --- --- --- 028240 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 028306 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028402 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028642 00000 ------------ G 1.00 0.91 0.96 C 0.00 0.09 0.04 0000 --- --- --- --- 028770 00000 ------------ C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 029201 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 029300 00000 ------------ G 0.63 0.77 0.71 C 0.37 0.23 0.29 0000 --- --- --- --- 029376 00000 ------------ G 0.87 0.93 0.90 T 0.13 0.07 0.10 0000 --- --- --- --- 029391 00000 ------------ - 0.05 0.00 0.02 + 0.95 1.00 0.98 0000 --- --- --- --- 029509 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 029623 03612 SYNON C 0.98 1.00 0.99 T 0.02 0.00 0.01 1091 CTG TTG LEU(L) LEU(L) 029820 00000 ------------ C 0.93 0.85 0.89 G 0.07 0.15 0.11 0000 --- --- --- --- 029983 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 030108 00000 ------------ G 0.95 0.89 0.92 A 0.05 0.11 0.08 0000 --- --- --- --- 030256 00000 ------------ G 0.84 1.00 0.93 A 0.16 0.00 0.07 0000 --- --- --- --- 030258 00000 ------------ G 0.84 1.00 0.93 A 0.16 0.00 0.07 0000 --- --- --- --- 030267 00000 ------------ G 0.89 0.70 0.79 A 0.11 0.30 0.21 0000 --- --- --- --- 030281 00000 ------------ A 0.76 0.85 0.81 G 0.24 0.15 0.19 0000 --- --- --- --- 030434 00000 ------------ A 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 030493 00000 ------------ G 0.83 1.00 0.91 T 0.17 0.00 0.09 0000 --- --- --- --- 030578 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031404 04039 3' UTR A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 031469 04104 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 031571 04206 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031703 00000 ------------ T 1.00 0.90 0.96 G 0.00 0.10 0.04 0000 --- --- --- --- 031835 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031837 00000 ------------ T 0.60 0.81 0.70 C 0.40 0.19 0.30 0000 --- --- --- --- 031841 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 031986 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000841: T 004186: CCCATTCA 019116: TGTTGAGG 025337: T 027115: AA 029391: GGCCTAGCCAATGAGC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000943 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 001115 00000 ------------ C 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 001247 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 001348 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 001386 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 001638 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 001927 00001 5' UTR T 0.74 0.33 0.53 C 0.26 0.67 0.47 0000 --- --- --- --- 002005 00000 ------------ T 0.44 0.88 0.64 C 0.56 0.12 0.36 0000 --- --- --- --- 002208 00000 ------------ G 0.44 0.91 0.63 A 0.56 0.09 0.37 0000 --- --- --- --- 002284 00000 ------------ G 0.79 0.64 0.73 C 0.21 0.36 0.27 0000 --- --- --- --- 002514 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 002669 00000 ------------ C 0.71 0.34 0.53 G 0.29 0.66 0.47 0000 --- --- --- --- 002943 00000 ------------ C 0.44 0.89 0.66 T 0.56 0.11 0.34 0000 --- --- --- --- 003051 00000 ------------ C 0.44 0.89 0.66 T 0.56 0.11 0.34 0000 --- --- --- --- 003087 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003342 00000 ------------ A 0.44 0.89 0.66 G 0.56 0.11 0.34 0000 --- --- --- --- 003533 00056 5' UTR G 0.71 0.33 0.52 A 0.29 0.67 0.48 0000 --- --- --- --- 003894 00000 ------------ A 0.44 0.89 0.66 G 0.56 0.11 0.34 0000 --- --- --- --- 004064 00000 ------------ C 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 004076 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004140 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004553 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004938 00000 ------------ G 0.89 0.78 0.83 C 0.11 0.22 0.17 0000 --- --- --- --- 005299 00000 ------------ C 0.92 0.72 0.82 G 0.08 0.28 0.18 0000 --- --- --- --- 005337 00000 ------------ C 0.88 0.83 0.85 T 0.12 0.17 0.15 0000 --- --- --- --- 005339 00000 ------------ G 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 005634 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 005863 00000 ------------ G 0.81 0.33 0.57 A 0.19 0.67 0.43 0000 --- --- --- --- 005878 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 005880 00000 ------------ C 0.85 0.78 0.82 T 0.15 0.22 0.18 0000 --- --- --- --- 005892 00000 ------------ G 0.91 0.72 0.82 A 0.09 0.28 0.18 0000 --- --- --- --- 006349 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 006764 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006974 01074 3' UTR G 0.91 1.00 0.96 A 0.09 0.00 0.04 0000 --- --- --- --- 007131 01231 3' UTR C 0.92 0.72 0.82 T 0.08 0.28 0.18 0000 --- --- --- --- 007694 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007762 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007777 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 007805 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 007851* 008082 00000 ------------ G 0.44 0.89 0.66 T 0.56 0.11 0.34 0000 --- --- --- --- 008119 00000 ------------ G 0.96 0.93 0.95 C 0.04 0.07 0.05 0000 --- --- --- --- 008226 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008230 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 009328 00000 ------------ C 0.93 0.70 0.82 G 0.07 0.30 0.18 0000 --- --- --- --- 009331 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 007851 A 0.56 0.11 0.34 C 0.42 0.89 0.65 T 0.02 0.00 0.01 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000335 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000376 00000 ------------ C 0.65 0.48 0.57 T 0.35 0.52 0.43 0000 --- --- --- --- 000434 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 000452 00000 ------------ - 0.09 0.00 0.05 + 0.91 1.00 0.95 0000 --- --- --- --- 000798 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 000805 00000 ------------ T 0.76 0.77 0.77 C 0.24 0.23 0.23 0000 --- --- --- --- 001564 00000 ------------ T 0.85 0.98 0.91 C 0.15 0.02 0.09 0000 --- --- --- --- 001804 00000 ------------ T 0.97 1.00 0.99 C 0.03 0.00 0.01 0000 --- --- --- --- 001857 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 002211 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002288 00012 5' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002343 00067 5' UTR G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 002383 00107 5' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002823 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 003358 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 003359 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003418 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003850 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004103 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004199 00000 ------------ A 0.43 0.61 0.52 G 0.57 0.39 0.48 0000 --- --- --- --- 004301 00000 ------------ C 1.00 0.85 0.92 T 0.00 0.15 0.08 0000 --- --- --- --- 004593 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 004952 00000 ------------ C 0.75 0.98 0.86 G 0.25 0.02 0.14 0000 --- --- --- --- 005172 00000 ------------ G 0.92 0.77 0.85 A 0.08 0.23 0.15 0000 --- --- --- --- 005420 00000 ------------ G 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 006390 00000 ------------ C 0.96 0.90 0.93 T 0.04 0.10 0.07 0000 --- --- --- --- 006925 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 007153 00000 ------------ C 0.92 0.78 0.85 T 0.08 0.22 0.15 0000 --- --- --- --- 007584 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 007752 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 007846 00000 ------------ A 1.00 0.85 0.93 C 0.00 0.15 0.07 0000 --- --- --- --- 009122 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 009152 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 009342 00000 ------------ G 0.87 1.00 0.93 T 0.13 0.00 0.07 0000 --- --- --- --- 009672 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009925 00000 ------------ C 0.85 1.00 0.92 A 0.15 0.00 0.08 0000 --- --- --- --- 009983 00000 ------------ A 0.92 0.78 0.85 G 0.08 0.22 0.15 0000 --- --- --- --- 010032 00000 ------------ T 0.85 1.00 0.93 C 0.15 0.00 0.07 0000 --- --- --- --- 010313 00000 ------------ A 0.85 1.00 0.93 G 0.15 0.00 0.07 0000 --- --- --- --- 010330 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 010530 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 010539 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 010574 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 010651 00000 ------------ - 0.12 0.00 0.06 + 0.88 1.00 0.94 0000 --- --- --- --- 010698 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011162 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 011199 00000 ------------ C 0.95 0.73 0.84 T 0.05 0.27 0.16 0000 --- --- --- --- 011513 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011691 01073 NON-SYN C 0.98 1.00 0.99 T 0.02 0.00 0.01 0318 TCC TTC SER(S) PHE(F) 011888 01270 NON-SYN A 0.98 1.00 0.99 G 0.02 0.00 0.01 0384 ACA GCA THR(T) ALA(A) 012434 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012439 00000 ------------ G 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 012518 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012648 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 012664 00000 ------------ G 0.81 0.32 0.58 T 0.19 0.68 0.42 0000 --- --- --- --- 012740 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012815 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 012907 00000 ------------ G 0.90 1.00 0.95 C 0.10 0.00 0.05 0000 --- --- --- --- 013180 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 013292 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 013438 00000 ------------ A 0.98 0.80 0.89 T 0.02 0.20 0.11 0000 --- --- --- --- 013642 00000 ------------ T 0.71 1.00 0.85 C 0.29 0.00 0.15 0000 --- --- --- --- 013792 01358 NON-SYN G 0.94 1.00 0.97 C 0.06 0.00 0.03 0413 GGT GCT GLY(G) ALA(A) 014294 00000 ------------ G 0.80 1.00 0.90 A 0.20 0.00 0.10 0000 --- --- --- --- 014361 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 014389 00000 ------------ A 1.00 0.95 0.98 G 0.00 0.05 0.02 0000 --- --- --- --- 014875 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015633 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 015713 00000 ------------ C 0.98 0.85 0.91 T 0.02 0.15 0.09 0000 --- --- --- --- 015818 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015894 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 016019 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 016045 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 016047 00000 ------------ C 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 016152 00000 ------------ A 0.85 0.85 0.85 G 0.15 0.15 0.15 0000 --- --- --- --- 016307 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 016891 00000 ------------ A 0.97 0.86 0.91 G 0.03 0.14 0.09 0000 --- --- --- --- 016984 00000 ------------ G 0.92 0.96 0.94 A 0.08 0.04 0.06 0000 --- --- --- --- 017472 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 017613 00000 ------------ A 0.48 0.67 0.57 G 0.52 0.33 0.43 0000 --- --- --- --- 017804 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017920 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018044 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 018152 00000 ------------ T 0.98 0.87 0.93 A 0.02 0.13 0.07 0000 --- --- --- --- 018345 00000 ------------ C 1.00 0.95 0.98 T 0.00 0.05 0.02 0000 --- --- --- --- 018831 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 018848 00000 ------------ - 0.00 0.02 0.01 + 1.00 0.98 0.99 0000 --- --- --- --- 019061 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019227 00000 ------------ A 0.70 0.35 0.52 G 0.30 0.65 0.48 0000 --- --- --- --- 019261 00000 ------------ C 0.91 1.00 0.96 T 0.09 0.00 0.04 0000 --- --- --- --- 019359 00000 ------------ G 0.59 0.66 0.62 A 0.41 0.34 0.38 0000 --- --- --- --- 019957 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 020118 00000 ------------ A 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 020400 00000 ------------ A 0.69 0.35 0.51 T 0.31 0.65 0.49 0000 --- --- --- --- 020669 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 020703 02199 SYNON C 0.88 0.84 0.86 T 0.12 0.16 0.14 0693 GAC GAT ASP(D) ASP(D) 020770 02266 NON-SYN A 0.94 1.00 0.97 T 0.06 0.00 0.03 0716 ATA TTA ILE(I) LEU(L) 020832 02328 SYNON A 0.67 0.96 0.81 G 0.33 0.04 0.19 0736 AAA AAG LYS(K) LYS(K) 020886 02382 3' UTR G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 021131 02627 3' UTR C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 021172 02668 3' UTR A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 021500 02996 3' UTR C 0.98 0.98 0.98 A 0.02 0.02 0.02 0000 --- --- --- --- 021649 00000 ------------ A 0.71 0.35 0.53 G 0.29 0.65 0.47 0000 --- --- --- --- 021733 00000 ------------ C 0.91 0.96 0.93 T 0.09 0.04 0.07 0000 --- --- --- --- 021771 00000 ------------ A 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 021803 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 021888 00000 ------------ T 0.98 0.98 0.98 C 0.02 0.02 0.02 0000 --- --- --- --- 022121 00000 ------------ C 0.84 0.90 0.87 A 0.16 0.10 0.13 0000 --- --- --- --- 022237 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 022304 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 022548 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 022668 00000 ------------ T 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 022701 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 000452: CT 010530: TGTA 010574: G 010651: T 012648: T 018848: A Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000674 00000 ------------ C 0.75 0.64 0.69 T 0.25 0.36 0.31 0000 --- --- --- --- 000836 00000 ------------ C 0.98 0.93 0.95 T 0.02 0.07 0.05 0000 --- --- --- --- 001411 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 001447 00000 ------------ G 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 001659 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 001955 00000 ------------ T 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 002415* 002523 00000 ------------ G 0.46 0.59 0.52 A 0.54 0.41 0.48 0000 --- --- --- --- 002575 00000 ------------ C 0.69 0.41 0.55 T 0.31 0.59 0.45 0000 --- --- --- --- 002622 00000 ------------ C 0.72 0.61 0.67 T 0.28 0.39 0.33 0000 --- --- --- --- 002752 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003031 00000 ------------ C 0.87 1.00 0.93 G 0.13 0.00 0.07 0000 --- --- --- --- 003057 00000 ------------ - 0.33 0.59 0.46 + 0.67 0.41 0.54 0000 --- --- --- --- 003238 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003300 00000 ------------ A 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 003504 00000 ------------ C 0.98 0.90 0.94 T 0.02 0.10 0.06 0000 --- --- --- --- 004113 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 004244 00000 ------------ T 0.91 1.00 0.96 C 0.09 0.00 0.04 0000 --- --- --- --- 004618 00000 ------------ C 0.93 0.61 0.77 T 0.07 0.39 0.23 0000 --- --- --- --- 005092 00000 ------------ C 0.77 0.74 0.76 A 0.23 0.26 0.24 0000 --- --- --- --- 005104 00000 ------------ G 0.58 0.59 0.59 A 0.42 0.41 0.41 0000 --- --- --- --- 005132 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 005449 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 005574 00000 ------------ C 0.54 0.59 0.57 T 0.46 0.41 0.43 0000 --- --- --- --- 005872 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 006166 00000 ------------ C 0.89 0.56 0.74 T 0.11 0.44 0.26 0000 --- --- --- --- 006326 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006361 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 006407 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 006420 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 006468 00000 ------------ T 0.87 1.00 0.94 G 0.13 0.00 0.06 0000 --- --- --- --- 006486 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 007125 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007245 00000 ------------ T 0.58 0.57 0.58 C 0.42 0.43 0.42 0000 --- --- --- --- 007368 00000 ------------ C 0.75 0.70 0.72 T 0.25 0.30 0.28 0000 --- --- --- --- 007375 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007446 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 007447 00000 ------------ G 0.58 0.57 0.58 A 0.42 0.43 0.42 0000 --- --- --- --- 007574 00000 ------------ T 0.60 0.74 0.67 C 0.40 0.26 0.33 0000 --- --- --- --- 007620 00000 ------------ A 0.98 0.88 0.93 T 0.02 0.12 0.07 0000 --- --- --- --- 007959 00000 ------------ A 0.85 0.89 0.87 G 0.15 0.11 0.13 0000 --- --- --- --- 007969 00000 ------------ - 0.65 0.50 0.58 + 0.35 0.50 0.42 0000 --- --- --- --- 008347 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 008349 00000 ------------ G 0.98 0.91 0.95 A 0.02 0.09 0.05 0000 --- --- --- --- 008355 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008356 00000 ------------ G 0.96 0.98 0.97 A 0.04 0.02 0.03 0000 --- --- --- --- 008433 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 008438 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 008642 00000 ------------ C 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 008794* 008985 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 009109 00000 ------------ C 0.92 0.67 0.80 T 0.08 0.33 0.20 0000 --- --- --- --- 009162 00000 ------------ C 0.81 0.65 0.73 T 0.19 0.35 0.27 0000 --- --- --- --- 009229 00000 ------------ T 0.81 0.65 0.73 C 0.19 0.35 0.27 0000 --- --- --- --- 009489 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009512 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 009552 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010489 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 010490 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010549 00000 ------------ G 0.74 0.55 0.64 C 0.26 0.45 0.36 0000 --- --- --- --- 010554 00000 ------------ G 0.88 0.91 0.89 A 0.12 0.09 0.11 0000 --- --- --- --- 010585 00000 ------------ G 0.88 0.91 0.89 C 0.12 0.09 0.11 0000 --- --- --- --- 010694 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011035 00000 ------------ C 0.78 0.64 0.71 T 0.22 0.36 0.29 0000 --- --- --- --- 011073 00000 ------------ A 0.76 0.89 0.83 G 0.24 0.11 0.17 0000 --- --- --- --- 011189 00000 ------------ G 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 011357 00000 ------------ C 0.67 0.89 0.78 T 0.33 0.11 0.22 0000 --- --- --- --- 011667 00000 ------------ C 0.79 0.65 0.72 G 0.21 0.35 0.28 0000 --- --- --- --- 011926 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 012081 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 012222 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 012534 00000 ------------ C 0.92 0.89 0.90 T 0.08 0.11 0.10 0000 --- --- --- --- 013049 00000 ------------ C 0.80 0.89 0.84 T 0.20 0.11 0.16 0000 --- --- --- --- 013210 00000 ------------ G 0.67 0.56 0.62 A 0.33 0.44 0.38 0000 --- --- --- --- 013323 00000 ------------ G 1.00 0.90 0.95 A 0.00 0.10 0.05 0000 --- --- --- --- 013893 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 015186 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- *** Sites are not mapped to the complete CDS. NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003057: T 007969: TG The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 002415 C 0.54 0.41 0.48 G 0.35 0.59 0.47 T 0.10 0.00 0.05 008794 C 0.90 0.83 0.86 G 0.02 0.13 0.07 T 0.08 0.04 0.06 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000298 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 000381 00000 ------------ T 0.52 0.54 0.53 C 0.48 0.46 0.47 0000 --- --- --- --- 000740 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 000861 00000 ------------ C 0.88 0.61 0.74 A 0.12 0.39 0.26 0000 --- --- --- --- 002653 00000 ------------ G 0.88 0.77 0.83 C 0.12 0.23 0.17 0000 --- --- --- --- 003435 00000 ------------ A 0.70 1.00 0.86 G 0.30 0.00 0.14 0000 --- --- --- --- 003673 00000 ------------ G 0.88 0.57 0.71 A 0.12 0.43 0.29 0000 --- --- --- --- 004719 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004835 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004845 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005808 00000 ------------ T 0.94 0.70 0.82 G 0.06 0.30 0.18 0000 --- --- --- --- 005970 00000 ------------ C 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 006009 00000 ------------ C 0.93 0.79 0.86 T 0.07 0.21 0.14 0000 --- --- --- --- 006191 00000 ------------ C 0.93 1.00 0.96 T 0.07 0.00 0.04 0000 --- --- --- --- 006484 00000 ------------ C 0.86 0.52 0.69 T 0.14 0.48 0.31 0000 --- --- --- --- 006853 00000 ------------ G 0.81 0.54 0.68 C 0.19 0.46 0.32 0000 --- --- --- --- 006915 00000 ------------ T 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 006960 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 007566 00000 ------------ C 0.75 0.55 0.65 T 0.25 0.45 0.35 0000 --- --- --- --- 007817 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008026 00000 ------------ A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 008773 00584 SYNON C 0.79 1.00 0.89 T 0.21 0.00 0.11 0120 CTG TTG LEU(L) LEU(L) 009041 00852 3' UTR G 0.56 0.67 0.62 A 0.44 0.33 0.38 0000 --- --- --- --- 010146 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 010212 00000 ------------ A 0.89 1.00 0.95 C 0.11 0.00 0.05 0000 --- --- --- --- 010424 00000 ------------ G 0.89 1.00 0.95 A 0.11 0.00 0.05 0000 --- --- --- --- 010466 00000 ------------ C 0.98 0.98 0.98 T 0.02 0.02 0.02 0000 --- --- --- --- 010719 00000 ------------ G 0.91 1.00 0.95 C 0.09 0.00 0.05 0000 --- --- --- --- 011040 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000111 00000 ------------ T 0.98 0.95 0.97 A 0.02 0.05 0.03 0000 --- --- --- --- 000126 00000 ------------ T 0.85 0.93 0.89 C 0.15 0.07 0.11 0000 --- --- --- --- 000470 00000 ------------ T 0.88 1.00 0.93 G 0.12 0.00 0.07 0000 --- --- --- --- 000542 00000 ------------ C 0.94 1.00 0.97 A 0.06 0.00 0.03 0000 --- --- --- --- 000561 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000708 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 000751 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 000788 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 000857 00000 ------------ T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 001226 00000 ------------ A 0.65 0.72 0.68 C 0.35 0.28 0.32 0000 --- --- --- --- 001341 00000 ------------ T 0.79 0.76 0.78 A 0.21 0.24 0.22 0000 --- --- --- --- 001373 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001403 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 001678 00000 ------------ G 0.37 0.88 0.58 C 0.63 0.12 0.42 0000 --- --- --- --- 001770 00000 ------------ T 0.98 0.75 0.92 C 0.02 0.25 0.08 0000 --- --- --- --- 002215 00000 ------------ G 1.00 0.95 0.98 C 0.00 0.05 0.02 0000 --- --- --- --- 002273 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 002317 00000 ------------ G 0.96 0.82 0.89 A 0.04 0.18 0.11 0000 --- --- --- --- 002330 00000 ------------ C 0.83 0.48 0.66 T 0.17 0.52 0.34 0000 --- --- --- --- 002409 00024 SYNON G 0.91 1.00 0.96 A 0.09 0.00 0.04 0008 GCG GCA ALA(A) ALA(A) 002474 00000 ------------ G 0.83 0.43 0.63 A 0.17 0.57 0.37 0000 --- --- --- --- 002511 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002519 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 003449 00000 ------------ C 0.72 0.91 0.81 T 0.28 0.09 0.19 0000 --- --- --- --- 003670 00000 ------------ - 0.64 0.07 0.36 + 0.36 0.93 0.64 0000 --- --- --- --- 003739 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003812 00000 ------------ A 0.46 0.79 0.61 G 0.54 0.21 0.39 0000 --- --- --- --- 003895 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 003950 00000 ------------ C 0.85 1.00 0.92 T 0.15 0.00 0.08 0000 --- --- --- --- 004000 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004261 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 004301 00000 ------------ A 0.89 0.77 0.83 T 0.11 0.23 0.17 0000 --- --- --- --- 004383 00000 ------------ A 0.89 0.80 0.84 G 0.11 0.20 0.16 0000 --- --- --- --- 004473 00000 ------------ C 0.89 1.00 0.94 T 0.11 0.00 0.06 0000 --- --- --- --- 004491 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 004581 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 004630 00000 ------------ A 0.80 0.80 0.80 G 0.20 0.20 0.20 0000 --- --- --- --- 004673 00000 ------------ G 0.93 0.95 0.94 A 0.07 0.05 0.06 0000 --- --- --- --- 004772 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 004792 00000 ------------ T 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 004802 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 005071 00000 ------------ T 0.77 0.90 0.84 C 0.23 0.10 0.16 0000 --- --- --- --- 005238 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 005277 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 005369 00000 ------------ T 0.60 0.54 0.57 G 0.40 0.46 0.43 0000 --- --- --- --- 005550 00000 ------------ A 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 006228 00000 ------------ C 0.76 0.93 0.85 G 0.24 0.07 0.15 0000 --- --- --- --- 006457 00000 ------------ T 0.70 0.57 0.63 C 0.30 0.43 0.37 0000 --- --- --- --- 006510 00000 ------------ G 0.85 0.57 0.71 A 0.15 0.43 0.29 0000 --- --- --- --- 006530 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 006536 00000 ------------ A 1.00 0.63 0.82 G 0.00 0.37 0.18 0000 --- --- --- --- 006625 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 006851 00000 ------------ G 0.92 0.53 0.74 A 0.08 0.47 0.26 0000 --- --- --- --- 006900 00000 ------------ G 0.96 0.75 0.86 T 0.04 0.25 0.14 0000 --- --- --- --- 007010 00000 ------------ - 0.69 0.55 0.62 + 0.31 0.45 0.38 0000 --- --- --- --- 007048 00000 ------------ G 0.65 0.50 0.58 A 0.35 0.50 0.42 0000 --- --- --- --- 007113 00000 ------------ C 0.54 0.68 0.60 G 0.46 0.32 0.40 0000 --- --- --- --- 007174 00000 ------------ C 0.96 0.88 0.92 G 0.04 0.12 0.08 0000 --- --- --- --- 007217 00000 ------------ T 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 007264 00000 ------------ - 0.31 0.47 0.39 + 0.69 0.53 0.61 0000 --- --- --- --- 007314 00000 ------------ A 1.00 0.87 0.94 C 0.00 0.13 0.06 0000 --- --- --- --- 007565 00000 ------------ T 0.93 0.88 0.91 A 0.07 0.12 0.09 0000 --- --- --- --- 007879 00000 ------------ A 0.88 0.91 0.89 G 0.12 0.09 0.11 0000 --- --- --- --- 008056 00000 ------------ C 0.83 0.70 0.76 A 0.17 0.30 0.24 0000 --- --- --- --- 008094 00000 ------------ A 0.85 0.82 0.84 G 0.15 0.18 0.16 0000 --- --- --- --- 008154 00000 ------------ C 0.85 0.80 0.83 G 0.15 0.20 0.17 0000 --- --- --- --- 008633 00000 ------------ T 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 008644 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 008962 00000 ------------ A 0.91 0.95 0.93 C 0.09 0.05 0.07 0000 --- --- --- --- 009157 00000 ------------ C 0.93 1.00 0.97 T 0.07 0.00 0.03 0000 --- --- --- --- 009214 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009229* 009352 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009386 00000 ------------ G 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 009524 00000 ------------ C 0.85 0.91 0.88 T 0.15 0.09 0.12 0000 --- --- --- --- 009528 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 009615 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 009623 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 009660 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 009976 00000 ------------ G 0.67 0.42 0.56 A 0.33 0.57 0.44 0000 --- --- --- --- 010043 00000 ------------ C 1.00 0.91 0.96 G 0.00 0.09 0.04 0000 --- --- --- --- 010111 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 010122 00000 ------------ A 0.92 0.82 0.87 C 0.08 0.18 0.13 0000 --- --- --- --- 010183 00000 ------------ T 0.83 0.89 0.86 G 0.17 0.11 0.14 0000 --- --- --- --- 010240 00000 ------------ C 0.67 0.48 0.58 T 0.33 0.52 0.42 0000 --- --- --- --- 010595 00000 ------------ G 0.88 1.00 0.94 A 0.12 0.00 0.06 0000 --- --- --- --- 010985 00000 ------------ A 0.78 0.63 0.71 G 0.22 0.37 0.29 0000 --- --- --- --- 011047 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011099 00000 ------------ A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 011173 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 011284 00000 ------------ T 1.00 0.64 0.81 C 0.00 0.36 0.19 0000 --- --- --- --- 011292 00000 ------------ C 0.81 0.36 0.58 T 0.19 0.64 0.42 0000 --- --- --- --- 011688 00000 ------------ G 0.98 0.91 0.94 A 0.02 0.09 0.06 0000 --- --- --- --- 011768 00000 ------------ G 0.46 0.59 0.52 A 0.54 0.41 0.48 0000 --- --- --- --- 011793 00000 ------------ G 0.83 1.00 0.91 A 0.17 0.00 0.09 0000 --- --- --- --- 011819 00000 ------------ C 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 011842 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011880 00000 ------------ A 0.77 0.92 0.84 G 0.23 0.08 0.16 0000 --- --- --- --- 011901 00000 ------------ - 0.62 0.33 0.50 + 0.38 0.67 0.50 0000 --- --- --- --- 011938 00000 ------------ A 0.62 0.65 0.64 G 0.38 0.35 0.36 0000 --- --- --- --- 012132 00000 ------------ C 0.48 0.78 0.61 T 0.52 0.23 0.39 0000 --- --- --- --- 012450 00000 ------------ C 0.79 0.87 0.83 A 0.21 0.13 0.17 0000 --- --- --- --- 012471 00000 ------------ C 1.00 0.97 0.99 T 0.00 0.03 0.01 0000 --- --- --- --- 012503 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 012565 00000 ------------ T 0.75 0.97 0.85 G 0.25 0.03 0.15 0000 --- --- --- --- 012622 00000 ------------ A 0.98 0.95 0.97 C 0.02 0.05 0.03 0000 --- --- --- --- 012647 00000 ------------ T 0.46 0.93 0.69 C 0.54 0.07 0.31 0000 --- --- --- --- 013036 00000 ------------ C 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013367 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 013463 00000 ------------ C 0.67 0.98 0.82 G 0.33 0.02 0.18 0000 --- --- --- --- 013495 00000 ------------ C 0.79 0.66 0.73 A 0.21 0.34 0.27 0000 --- --- --- --- 013579 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 013596 00000 ------------ C 0.69 0.98 0.83 G 0.31 0.02 0.17 0000 --- --- --- --- 013660 00000 ------------ A 0.70 0.98 0.84 G 0.30 0.02 0.16 0000 --- --- --- --- 013748 00000 ------------ T 0.42 0.64 0.54 C 0.57 0.36 0.46 0000 --- --- --- --- 013762 00000 ------------ A 0.95 0.81 0.88 G 0.05 0.19 0.12 0000 --- --- --- --- 014121 00000 ------------ C 0.94 0.93 0.94 T 0.06 0.07 0.06 0000 --- --- --- --- 014344 00000 ------------ A 0.97 1.00 0.99 G 0.03 0.00 0.01 0000 --- --- --- --- 014394 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 014627 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 014846 00000 ------------ T 0.66 0.57 0.62 A 0.34 0.43 0.38 0000 --- --- --- --- 015316 00000 ------------ G 0.74 0.75 0.74 C 0.26 0.25 0.26 0000 --- --- --- --- 015395 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 015745 00175 NON-SYN G 0.74 0.98 0.85 A 0.26 0.02 0.15 0059 GTT ATT VAL(V) ILE(I) 015999 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 016152 00000 ------------ - 0.56 0.75 0.66 + 0.44 0.25 0.34 0000 --- --- --- --- 016331 00000 ------------ C 1.00 0.90 0.95 T 0.00 0.10 0.05 0000 --- --- --- --- 016362 00000 ------------ C 0.42 0.60 0.50 T 0.58 0.40 0.50 0000 --- --- --- --- 016693 00000 ------------ G 0.69 0.57 0.63 A 0.31 0.43 0.37 0000 --- --- --- --- 016721 00000 ------------ T 0.69 0.59 0.64 G 0.31 0.41 0.36 0000 --- --- --- --- 017129 00000 ------------ - 0.98 1.00 0.99 + 0.02 0.00 0.01 0000 --- --- --- --- 017194 00000 ------------ T 0.80 0.98 0.89 C 0.20 0.02 0.11 0000 --- --- --- --- 017220 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 017473 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017519 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 017753 00000 ------------ T 0.63 0.57 0.60 G 0.37 0.42 0.40 0000 --- --- --- --- 017837 00000 ------------ - 0.87 0.82 0.85 + 0.13 0.17 0.15 0000 --- --- --- --- 017866 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 017977 00000 ------------ T 0.70 0.58 0.65 C 0.30 0.42 0.35 0000 --- --- --- --- 018101 00000 ------------ A 0.64 0.97 0.80 G 0.36 0.03 0.20 0000 --- --- --- --- 018301 00000 ------------ A 1.00 0.97 0.99 G 0.00 0.03 0.01 0000 --- --- --- --- 018316 00000 ------------ T 0.70 0.42 0.57 C 0.30 0.57 0.43 0000 --- --- --- --- 018423 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 018449 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018468 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 018518 00000 ------------ T 0.91 1.00 0.95 G 0.09 0.00 0.05 0000 --- --- --- --- 018739 00000 ------------ - 0.19 0.00 0.10 + 0.81 1.00 0.90 0000 --- --- --- --- 018999 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 019002 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 019026 00000 ------------ G 0.46 0.59 0.52 T 0.54 0.41 0.48 0000 --- --- --- --- 019282 00000 ------------ C 0.81 1.00 0.90 T 0.19 0.00 0.10 0000 --- --- --- --- 019497 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 019577 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 019696 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 019736 00000 ------------ A 0.71 1.00 0.85 G 0.29 0.00 0.15 0000 --- --- --- --- 019948 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 020024 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 020695 00000 ------------ G 0.81 0.59 0.70 A 0.19 0.41 0.30 0000 --- --- --- --- 020808 00000 ------------ C 0.92 1.00 0.96 T 0.08 0.00 0.04 0000 --- --- --- --- 020962 00000 ------------ A 0.75 0.96 0.85 G 0.25 0.04 0.15 0000 --- --- --- --- 021022 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 021097 00000 ------------ G 0.92 1.00 0.96 C 0.08 0.00 0.04 0000 --- --- --- --- 021310 00000 ------------ T 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 021756 00000 ------------ - 0.96 1.00 0.98 + 0.04 0.00 0.02 0000 --- --- --- --- 023408 00492 SYNON C 0.96 0.98 0.97 G 0.04 0.02 0.03 0164 GGC GGG GLY(G) GLY(G) 023701 00785 NON-SYN C 1.00 0.98 0.99 A 0.00 0.02 0.01 0262 CCT CAT PRO(P) HIS(H) 024037 00000 ------------ T 0.81 1.00 0.90 C 0.19 0.00 0.10 0000 --- --- --- --- 024207 00000 ------------ C 0.65 0.93 0.79 T 0.35 0.07 0.21 0000 --- --- --- --- 024213 00000 ------------ C 0.88 0.98 0.93 A 0.12 0.02 0.07 0000 --- --- --- --- 024670 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 024673 00000 ------------ C 0.93 1.00 0.97 A 0.07 0.00 0.03 0000 --- --- --- --- 024748 00000 ------------ G 0.67 0.70 0.68 A 0.33 0.30 0.32 0000 --- --- --- --- 025079 00000 ------------ T 0.79 1.00 0.89 C 0.21 0.00 0.11 0000 --- --- --- --- 025159 00000 ------------ C 0.98 0.70 0.84 T 0.02 0.30 0.16 0000 --- --- --- --- 025314 00000 ------------ G 1.00 0.70 0.85 A 0.00 0.30 0.15 0000 --- --- --- --- 025406 00000 ------------ C 0.94 0.80 0.87 G 0.06 0.20 0.13 0000 --- --- --- --- 025650 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 025678 00000 ------------ A 0.92 1.00 0.96 G 0.08 0.00 0.04 0000 --- --- --- --- 025762 00000 ------------ A 0.67 0.70 0.68 T 0.33 0.30 0.32 0000 --- --- --- --- 025856 01390 NON-SYN C 0.98 1.00 0.99 A 0.02 0.00 0.01 0464 CTA ATA LEU(L) ILE(I) 025924 01458 SYNON C 0.90 1.00 0.95 T 0.10 0.00 0.05 0486 GCC GCT ALA(A) ALA(A) 025978 00000 ------------ T 1.00 0.70 0.85 G 0.00 0.30 0.15 0000 --- --- --- --- 026000 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026075 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026095 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026312 00000 ------------ A 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 026474 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 026735 01681 NON-SYN A 1.00 0.98 0.99 G 0.00 0.02 0.01 0561 ATA GTA ILE(I) VAL(V) 027347 00000 ------------ - 0.17 0.30 0.24 + 0.83 0.70 0.76 0000 --- --- --- --- 027597 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 027825 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 027965 00000 ------------ A 0.67 0.67 0.67 G 0.33 0.33 0.33 0000 --- --- --- --- 028294 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 028428 01838 NON-SYN G 1.00 0.98 0.99 A 0.00 0.02 0.01 0613 CGC CAC ARG(R) HIS(H) 028702 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 028743 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 028978 02067 SYNON A 1.00 0.66 0.85 G 0.00 0.34 0.15 0689 CAA CAG GLN(Q) GLN(Q) 029341 00000 ------------ T 1.00 0.97 0.99 C 0.00 0.03 0.01 0000 --- --- --- --- 029607 00000 ------------ G 1.00 0.66 0.85 T 0.00 0.34 0.15 0000 --- --- --- --- 029678 00000 ------------ C 0.94 1.00 0.97 G 0.06 0.00 0.03 0000 --- --- --- --- 029798 00000 ------------ T 0.98 0.66 0.84 C 0.02 0.34 0.16 0000 --- --- --- --- 030007 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 030469 00000 ------------ T 0.96 0.68 0.83 G 0.04 0.32 0.17 0000 --- --- --- --- 030777 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 030819 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030857 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 030986 00000 ------------ A 0.92 0.98 0.94 C 0.08 0.02 0.06 0000 --- --- --- --- 030989 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 031119 00000 ------------ G 0.56 0.69 0.62 A 0.44 0.31 0.38 0000 --- --- --- --- 031224 00000 ------------ A 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 031350 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 031456 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 031545 00000 ------------ A 0.98 0.67 0.83 G 0.02 0.33 0.17 0000 --- --- --- --- 031553 00000 ------------ T 0.85 0.98 0.91 C 0.15 0.02 0.09 0000 --- --- --- --- 031590 00000 ------------ T 0.91 0.98 0.95 C 0.09 0.02 0.05 0000 --- --- --- --- 031919 00000 ------------ T 0.85 0.98 0.91 G 0.15 0.02 0.09 0000 --- --- --- --- 032014 00000 ------------ T 0.92 0.98 0.95 C 0.08 0.02 0.05 0000 --- --- --- --- 032114 02371 NON-SYN G 0.98 1.00 0.99 A 0.02 0.00 0.01 0791 GTT ATT VAL(V) ILE(I) 032167 00000 ------------ G 0.56 0.67 0.62 T 0.44 0.33 0.38 0000 --- --- --- --- 032462 00000 ------------ C 0.88 1.00 0.94 G 0.12 0.00 0.06 0000 --- --- --- --- 032506 00000 ------------ T 1.00 0.67 0.84 C 0.00 0.33 0.16 0000 --- --- --- --- 032628 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 032794 00000 ------------ C 0.75 0.70 0.72 T 0.25 0.30 0.28 0000 --- --- --- --- 033627 00000 ------------ C 1.00 0.68 0.85 G 0.00 0.33 0.15 0000 --- --- --- --- 033655 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 033924 00000 ------------ C 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 034119 02668 3' UTR C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 034253 02802 3' UTR G 0.73 0.98 0.85 A 0.27 0.02 0.15 0000 --- --- --- --- 034607 03156 3' UTR T 1.00 0.98 0.99 C 0.00 0.02 0.01 0000 --- --- --- --- 034624 03173 3' UTR T 0.88 0.67 0.78 C 0.12 0.33 0.22 0000 --- --- --- --- 034822 00000 ------------ C 0.60 0.65 0.63 T 0.40 0.35 0.37 0000 --- --- --- --- 035096 00000 ------------ - 0.88 0.67 0.78 + 0.12 0.33 0.22 0000 --- --- --- --- 035210 00000 ------------ A 0.92 0.98 0.95 G 0.08 0.02 0.05 0000 --- --- --- --- 035221 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 035471 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 035707 00000 ------------ - 0.02 0.00 0.01 + 0.98 1.00 0.99 0000 --- --- --- --- 035727 00000 ------------ G 0.58 0.67 0.63 A 0.42 0.33 0.37 0000 --- --- --- --- 035909 00000 ------------ T 0.60 0.65 0.63 C 0.40 0.35 0.37 0000 --- --- --- --- 035915 00000 ------------ T 0.90 0.98 0.94 C 0.10 0.02 0.06 0000 --- --- --- --- 035990 00000 ------------ C 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 036391 00000 ------------ - 0.30 0.02 0.16 + 0.70 0.98 0.84 0000 --- --- --- --- 036467 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003670: A 007010: AGTT 007264: GGT 011173: A 011901: A 016152: A 017129: T 017837: T 018739: TCTAA 021756: GG 027347: CAGC 035096: AA 035707: AAGAT 036391: T The following site(s) was observed to have three alleles. The frequency for each allele is given below: Site Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Allele3 AD-freq ED-freq Total-freq 009229 A 0.83 0.64 0.73 C 0.00 0.36 0.18 G 0.17 0.00 0.09 Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000117 00000 ------------ G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- 000384 00000 ------------ G 0.76 0.95 0.86 T 0.24 0.05 0.14 0000 --- --- --- --- 000925 00000 ------------ G 0.94 1.00 0.97 C 0.06 0.00 0.03 0000 --- --- --- --- 000967 00000 ------------ T 0.73 0.96 0.84 C 0.27 0.04 0.16 0000 --- --- --- --- 001037 00000 ------------ G 0.73 0.96 0.84 T 0.27 0.04 0.16 0000 --- --- --- --- 001795 00427 NON-SYN G 1.00 0.98 0.99 T 0.00 0.02 0.01 0122 GCC TCC ALA(A) SER(S) 002006 00000 ------------ G 0.75 0.96 0.85 A 0.25 0.04 0.15 0000 --- --- --- --- 002011 00000 ------------ T 0.73 0.96 0.84 C 0.27 0.04 0.16 0000 --- --- --- --- 002412 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 002572 00866 NON-SYN G 0.96 1.00 0.98 A 0.04 0.00 0.02 0268 CGG CAG ARG(R) GLN(Q) 002608 00000 ------------ T 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 002656 00000 ------------ C 0.87 0.52 0.70 T 0.13 0.48 0.30 0000 --- --- --- --- 002784 00000 ------------ C 0.98 0.96 0.97 T 0.02 0.04 0.03 0000 --- --- --- --- 003627 01262 NON-SYN C 0.52 0.57 0.54 T 0.48 0.43 0.46 0400 ACG ATG THR(T) MET(M) 003827 00000 ------------ C 0.79 0.96 0.87 T 0.21 0.04 0.13 0000 --- --- --- --- 003960 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 004005 01407 SYNON T 0.79 0.96 0.87 C 0.21 0.04 0.13 0448 AAT AAC ASN(N) ASN(N) 004192 00000 ------------ T 0.76 0.95 0.86 C 0.24 0.05 0.14 0000 --- --- --- --- 004361 00000 ------------ + 0.06 0.00 0.03 - 0.94 1.00 0.97 0000 --- --- --- --- 004454 00000 ------------ A 1.00 0.96 0.98 T 0.00 0.04 0.02 0000 --- --- --- --- 004534 00000 ------------ T 0.95 1.00 0.98 C 0.05 0.00 0.02 0000 --- --- --- --- 004772 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 004873 00000 ------------ A 0.93 1.00 0.97 G 0.07 0.00 0.03 0000 --- --- --- --- 005092 00000 ------------ T 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 005232 00000 ------------ A 0.79 0.52 0.65 G 0.21 0.48 0.35 0000 --- --- --- --- 005259 00000 ------------ G 0.79 0.52 0.65 C 0.21 0.48 0.35 0000 --- --- --- --- 005260 00000 ------------ C 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 005278 00000 ------------ G 0.90 1.00 0.95 A 0.10 0.00 0.05 0000 --- --- --- --- 005286 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 005344 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 004361: AA Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 001746 00000 ------------ C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 002182 00232 SYNON C 0.93 1.00 0.97 T 0.07 0.00 0.03 0050 CTC CTT LEU(L) LEU(L) 010057 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 010087 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 011089 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 011752 00000 ------------ C 0.88 1.00 0.94 T 0.12 0.00 0.06 0000 --- --- --- --- 012417 00000 ------------ C 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 012500 00000 ------------ A 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 012539 00000 ------------ A 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 012629 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 016370 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 016392 00000 ------------ G 0.95 1.00 0.98 A 0.05 0.00 0.02 0000 --- --- --- --- 016887 00000 ------------ G 1.00 0.96 0.98 C 0.00 0.04 0.02 0000 --- --- --- --- 017294 00000 ------------ G 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 017543 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 017645 00000 ------------ - 0.19 0.00 0.10 + 0.81 1.00 0.90 0000 --- --- --- --- 017927 00000 ------------ - 0.42 0.00 0.21 + 0.58 1.00 0.79 0000 --- --- --- --- 017979 00000 ------------ G 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 018075 00000 ------------ C 0.77 0.80 0.79 T 0.23 0.20 0.21 0000 --- --- --- --- 018404 00000 ------------ G 0.96 1.00 0.98 C 0.04 0.00 0.02 0000 --- --- --- --- 019058 00000 ------------ A 0.95 1.00 0.97 G 0.05 0.00 0.03 0000 --- --- --- --- 020649 00000 ------------ G 0.79 0.80 0.80 A 0.21 0.20 0.20 0000 --- --- --- --- 020840 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 020874 00000 ------------ C 0.95 1.00 0.98 T 0.05 0.00 0.02 0000 --- --- --- --- 025526 00000 ------------ G 0.23 0.84 0.52 T 0.77 0.16 0.48 0000 --- --- --- --- 026268 00000 ------------ G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 026684 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 028381 00000 ------------ C 0.44 0.78 0.57 G 0.56 0.22 0.42 0000 --- --- --- --- 034235 00000 ------------ C 1.00 0.96 0.98 A 0.00 0.04 0.02 0000 --- --- --- --- 034941 00000 ------------ G 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 034965 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 035249 00000 ------------ A 0.85 0.80 0.83 G 0.15 0.20 0.17 0000 --- --- --- --- 035340 00000 ------------ G 0.94 1.00 0.97 T 0.06 0.00 0.03 0000 --- --- --- --- 035787 00000 ------------ A 0.90 1.00 0.95 G 0.10 0.00 0.05 0000 --- --- --- --- 036064 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 036260 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 037670 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 038546 00000 ------------ G 0.92 1.00 0.95 A 0.08 0.00 0.05 0000 --- --- --- --- 039558 00000 ------------ A 0.21 0.80 0.52 G 0.79 0.20 0.48 0000 --- --- --- --- 044642 01506 3' UTR A 0.85 0.80 0.83 T 0.15 0.20 0.17 0000 --- --- --- --- 045419 02283 3' UTR A 0.95 1.00 0.98 G 0.05 0.00 0.02 0000 --- --- --- --- 045490 02354 3' UTR G 0.57 1.00 0.80 A 0.43 0.00 0.20 0000 --- --- --- --- 046021 02885 3' UTR G 0.96 1.00 0.98 A 0.04 0.00 0.02 0000 --- --- --- --- 046388 03252 3' UTR A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 046438 03302 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 046517 03381 3' UTR C 0.90 1.00 0.95 T 0.10 0.00 0.05 0000 --- --- --- --- 047076 03940 3' UTR T 0.75 0.80 0.78 C 0.25 0.20 0.22 0000 --- --- --- --- 047446 04310 3' UTR C 0.92 1.00 0.96 A 0.08 0.00 0.04 0000 --- --- --- --- 047903 04767 3' UTR A 0.88 0.80 0.84 T 0.12 0.20 0.16 0000 --- --- --- --- 048135 04999 3' UTR G 0.97 1.00 0.99 A 0.03 0.00 0.01 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 017645: CAC 017927: GGAGAGAC Site CDNA-Pos Description Allele1 AD-freq ED-freq Total-freq Allele2 AD-freq ED-freq Total-freq Protein-Pos Codon1 Codon2 Amino1 Amino2 000473 00000 ------------ A 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 000543 00000 ------------ G 0.85 0.76 0.80 A 0.15 0.24 0.20 0000 --- --- --- --- 000603 00000 ------------ C 0.85 0.76 0.80 T 0.15 0.24 0.20 0000 --- --- --- --- 000831 00000 ------------ G 0.67 0.65 0.66 A 0.33 0.35 0.34 0000 --- --- --- --- 001244 00000 ------------ G 0.67 0.66 0.66 C 0.33 0.34 0.34 0000 --- --- --- --- 001289 00000 ------------ T 0.85 0.77 0.82 A 0.15 0.23 0.18 0000 --- --- --- --- 001365 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 001472 00000 ------------ G 0.67 0.66 0.66 A 0.33 0.34 0.34 0000 --- --- --- --- 001555 00000 ------------ A 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 001572 00000 ------------ T 0.85 0.77 0.82 C 0.15 0.23 0.18 0000 --- --- --- --- 002423 00000 ------------ C 0.85 0.89 0.87 T 0.15 0.11 0.13 0000 --- --- --- --- 002832 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 002895 00000 ------------ C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 003013 00471 NON-SYN C 0.85 0.76 0.81 T 0.15 0.24 0.19 0154 GCG GTG ALA(A) VAL(V) 003219 00000 ------------ - 0.71 0.65 0.68 + 0.29 0.35 0.32 0000 --- --- --- --- 003223 00000 ------------ A 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 003549 00000 ------------ C 1.00 0.98 0.99 T 0.00 0.02 0.01 0000 --- --- --- --- 003591 00649 SYNON C 0.87 1.00 0.93 T 0.13 0.00 0.07 0213 GAC GAT ASP(D) ASP(D) 003753 00000 ------------ T 1.00 0.98 0.99 A 0.00 0.02 0.01 0000 --- --- --- --- 004291 00000 ------------ - 0.04 0.00 0.02 + 0.96 1.00 0.98 0000 --- --- --- --- 004444 00000 ------------ G 0.59 0.66 0.62 A 0.41 0.34 0.38 0000 --- --- --- --- 004468 00000 ------------ C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 004547 00742 SYNON A 1.00 0.82 0.91 G 0.00 0.18 0.09 0244 GTA GTG VAL(V) VAL(V) 004727 00000 ------------ T 0.98 1.00 0.99 G 0.02 0.00 0.01 0000 --- --- --- --- 004797 00000 ------------ C 0.83 0.76 0.80 T 0.17 0.24 0.20 0000 --- --- --- --- 004819 00000 ------------ T 0.98 1.00 0.99 A 0.02 0.00 0.01 0000 --- --- --- --- 004868 00000 ------------ T 0.83 0.76 0.80 G 0.17 0.24 0.20 0000 --- --- --- --- 005684 00000 ------------ C 0.85 0.76 0.80 T 0.15 0.24 0.20 0000 --- --- --- --- 006294 01468 SYNON C 0.96 1.00 0.98 T 0.04 0.00 0.02 0486 TGC TGT CYS(C) CYS(C) 006434 01608 NON-SYN G 1.00 0.98 0.99 C 0.00 0.02 0.01 0533 GGA GCA GLY(G) ALA(A) 006785 01959 3' UTR T 0.48 0.63 0.55 G 0.52 0.37 0.45 0000 --- --- --- --- 007191 02365 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 007399 02573 3' UTR A 0.98 1.00 0.99 C 0.02 0.00 0.01 0000 --- --- --- --- 007432 02606 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 007433 02607 3' UTR G 0.52 0.69 0.60 A 0.48 0.31 0.40 0000 --- --- --- --- 007569 02743 3' UTR A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 007897 03071 3' UTR C 0.96 1.00 0.98 T 0.04 0.00 0.02 0000 --- --- --- --- 008270 03444 3' UTR C 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 008884 00000 ------------ G 0.98 1.00 0.99 T 0.02 0.00 0.01 0000 --- --- --- --- 009229 00000 ------------ C 0.48 0.63 0.56 T 0.52 0.37 0.44 0000 --- --- --- --- 009248 00000 ------------ T 0.98 0.96 0.97 G 0.02 0.04 0.03 0000 --- --- --- --- 009873 00000 ------------ - 0.95 1.00 0.98 + 0.05 0.00 0.02 0000 --- --- --- --- 010168 00000 ------------ A 0.96 1.00 0.98 G 0.04 0.00 0.02 0000 --- --- --- --- 010240 00000 ------------ T 1.00 0.98 0.99 G 0.00 0.02 0.01 0000 --- --- --- --- 010270 00000 ------------ A 1.00 0.72 0.86 G 0.00 0.28 0.14 0000 --- --- --- --- 010485 00000 ------------ T 0.80 0.74 0.77 C 0.20 0.26 0.23 0000 --- --- --- --- NOTE: AD-freq: African Descent frequency ED-freq: European Descent frequency NOTE: Diallelic insertion/deletion polymorphisms are represented as: + : allele insertion - : allele deletion The + (inserted) allele for each site is listed below: 003219: GGACATTTCTC 004291: AAAG 009873: TATT